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BacMap: An Interactive Atlas for Exploring Bacterial Genomes
About BacMap
BacMap is an interactive visual database containing hundreds of fully labeled, zoomable, and searchable maps of bacterial genomes.

Some features of BacMap:
  • Maps are available for 2023 bacterial chromosomes.
  • Each map supports zooming and rotation.
  • Map gene labels are hyperlinked to detailed textual annotations.
  • Maps can be explored manually, or with the help of BacMap's built in text search and BLAST search.
  • A written synopsis of each bacterial species is provided.
  • Several charts illustrating the proteomic and genomic characteristics of each chromosome are available.
  • Flat file versions of the BacMap gene annotations, gene sequences and protein sequences can be downloaded.
Citing BacMap:

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Acaryochloris marina MBIC11017

Acaryochloris marina MBIC11017, complete genome.
NC_009925
6,503,724 bp


Acaryochloris marina MBIC11017 plasmid pREB1, complete sequence.
NC_009926
374,161 bp


Acaryochloris marina MBIC11017 plasmid pREB2, complete sequence.
NC_009927
356,087 bp


Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence.
NC_009928
273,121 bp


Acaryochloris marina MBIC11017 plasmid pREB4, complete sequence.
NC_009929
226,680 bp


Acaryochloris marina MBIC11017 plasmid pREB5, complete sequence.
NC_009930
177,162 bp


Acaryochloris marina MBIC11017 plasmid pREB6, complete sequence.
NC_009931
172,728 bp


Acaryochloris marina MBIC11017 plasmid pREB7, complete sequence.
NC_009932
155,110 bp


Acaryochloris marina MBIC11017 plasmid pREB8, complete sequence.
NC_009933
120,693 bp


Acaryochloris marina MBIC11017 plasmid pREB9, complete sequence.
NC_009934
2,133 bp


Acetobacter pasteurianus IFO 3283-01

Acetobacter pasteurianus IFO 3283-01, complete genome.
NC_013209
2,907,495 bp


Acetobacter pasteurianus IFO 3283-01 plasmid pAPA01-011, complete sequence.
NC_013210
191,799 bp


Acetobacter pasteurianus IFO 3283-01 plasmid pAPA01-020, complete sequence.
NC_013211
182,940 bp


Acetobacter pasteurianus IFO 3283-01 plasmid pAPA01-030, complete sequence.
NC_013212
49,961 bp


Acetobacter pasteurianus IFO 3283-01 plasmid pAPA01-040, complete sequence.
NC_013213
3,204 bp


Acetobacter pasteurianus IFO 3283-01 plasmid pAPA01-050, complete sequence.
NC_013214
3,035 bp


Acetobacter pasteurianus IFO 3283-01 plasmid pAPA01-060, complete sequence.
NC_013215
1,815 bp


Acholeplasma laidlawii PG-8A

Acholeplasma laidlawii PG-8A, complete genome.
NC_010163
1,496,992 bp


Acidaminococcus fermentans DSM 20731

Acidaminococcus fermentans DSM 20731, complete genome.
NC_013740
2,329,769 bp


Acidimicrobium ferrooxidans DSM 10331

Acidimicrobium ferrooxidans DSM 10331, complete genome.
NC_013124
2,158,157 bp


Acidiphilium cryptum JF-5

Acidiphilium cryptum JF-5, complete genome.
NC_009484
3,389,227 bp


Acidiphilium cryptum JF-5 plasmid pACRY01, complete sequence.
NC_009467
203,589 bp


Acidiphilium cryptum JF-5 plasmid pACRY02, complete sequence.
NC_009468
187,422 bp


Acidiphilium cryptum JF-5 plasmid pACRY03, complete sequence.
NC_009469
88,953 bp


Acidiphilium cryptum JF-5 plasmid pACRY04, complete sequence.
NC_009470
37,415 bp


Acidiphilium cryptum JF-5 plasmid pACRY05, complete sequence.
NC_009471
37,155 bp


Acidiphilium cryptum JF-5 plasmid pACRY06, complete sequence.
NC_009472
8,781 bp


Acidiphilium cryptum JF-5 plasmid pACRY07, complete sequence.
NC_009473
5,629 bp


Acidiphilium cryptum JF-5 plasmid pACRY08, complete sequence.
NC_009474
4,909 bp


Acidithiobacillus ferrooxidans ATCC 23270

Acidithiobacillus ferrooxidans ATCC 23270, complete genome.
NC_011761
2,982,397 bp


Acidithiobacillus ferrooxidans ATCC 53993

Acidithiobacillus ferrooxidans ATCC 53993, complete genome.
NC_011206
2,885,038 bp


Acidobacteria bacterium Ellin345

Acidobacteria bacterium Ellin345, complete genome.
NC_008009
5,650,368 bp


Acidobacterium capsulatum ATCC 51196

Acidobacterium capsulatum ATCC 51196, complete genome.
NC_012483
4,127,356 bp


Acidothermus cellulolyticus 11B

Acidothermus cellulolyticus 11B, complete genome.
NC_008578
2,443,540 bp


Acidovorax avenae subsp. citrulli AAC00-1

Acidovorax avenae subsp. citrulli AAC00-1, complete genome.
NC_008752
5,352,772 bp


Acidovorax ebreus TPSY

Acidovorax ebreus TPSY, complete genome.
NC_011992
3,796,573 bp


Acidovorax sp. JS42

Acidovorax sp. JS42, complete genome.
NC_008782
4,448,856 bp


Acidovorax sp. JS42 plasmid pAOVO01, complete sequence.
NC_008765
72,689 bp


Acidovorax sp. JS42 plasmid pAOVO02, complete sequence.
NC_008766
63,609 bp


Aciduliprofundum boonei T469

Aciduliprofundum boonei T469 chromosome, complete genome.
NC_013926
1,486,778 bp


Acinetobacter baumannii AB0057

Acinetobacter baumannii AB0057, complete genome.
NC_011586
4,050,513 bp


Acinetobacter baumannii AB0057 plasmid pAB0057, complete sequence.
NC_011585
8,729 bp


Acinetobacter baumannii AB307-0294

Acinetobacter baumannii AB307-0294, complete genome.
NC_011595
3,760,981 bp


Acinetobacter baumannii ACICU

Acinetobacter baumannii ACICU, complete genome.
NC_010611
3,904,116 bp


Acinetobacter baumannii ACICU plasmid pACICU2, complete sequence.
NC_010606
64,366 bp


Acinetobacter baumannii ACICU plasmid pACICU1, complete sequence.
NC_010605
28,279 bp


Acinetobacter baumannii ATCC 17978

Acinetobacter baumannii ATCC 17978, complete genome.
NC_009085
3,976,747 bp


Acinetobacter baumannii ATCC 17978 plasmid pAB1, complete sequence.
NC_009083
13,408 bp


Acinetobacter baumannii ATCC 17978 plasmid pAB2, complete sequence.
NC_009084
11,302 bp


Acinetobacter baumannii AYE

Acinetobacter baumannii AYE, complete genome.
NC_010410
3,936,291 bp


Acinetobacter baumannii AYE plasmid p3ABAYE, complete sequence.
NC_010404
94,413 bp


Acinetobacter baumannii AYE plasmid p2ABAYE, complete sequence.
NC_010402
9,661 bp


Acinetobacter baumannii AYE plasmid p1ABAYE, complete sequence.
NC_010401
5,644 bp


Acinetobacter baumannii AYE plasmid p4ABAYE, complete sequence.
NC_010403
2,726 bp


Acinetobacter baumannii SDF

Acinetobacter baumannii SDF, complete genome.
NC_010400
3,421,954 bp


Acinetobacter baumannii SDF plasmid p2ABSDF, complete sequence.
NC_010396
25,014 bp


Acinetobacter baumannii SDF plasmid p3ABSDF, complete sequence.
NC_010398
24,922 bp


Acinetobacter baumannii SDF plasmid p1ABSDF, complete sequence.
NC_010395
6,106 bp


Acinetobacter sp. ADP1

Acinetobacter sp. ADP1, complete genome.
NC_005966
3,598,621 bp


Actinobacillus pleuropneumoniae L20

Actinobacillus pleuropneumoniae L20, complete genome.
NC_009053
2,274,482 bp


Actinobacillus pleuropneumoniae serovar 3 str. JL03

Actinobacillus pleuropneumoniae serovar 3 str. JL03, complete genome.
NC_010278
2,242,062 bp


Actinobacillus pleuropneumoniae serovar 7 str. AP76

Actinobacillus pleuropneumoniae serovar 7 str. AP76, complete genome.
NC_010939
2,331,981 bp


Actinobacillus pleuropneumoniae serovar 7 str. AP76 plasmid APP7_A, complete sequence.
NC_010942
5,685 bp


Actinobacillus pleuropneumoniae serovar 7 str. AP76 plasmid ABB7_B, complete sequence.
NC_010941
4,236 bp


Actinobacillus pleuropneumoniae serovar 7 str. AP76 plasmid APP7_C, complete sequence.
NC_010940
3,533 bp


Actinobacillus succinogenes 130Z

Actinobacillus succinogenes 130Z, complete genome.
NC_009655
2,319,663 bp


Actinosynnema mirum DSM 43827

Actinosynnema mirum DSM 43827, complete genome.
NC_013093
8,248,144 bp


Aeromonas hydrophila subsp. hydrophila ATCC 7966

Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome.
NC_008570
4,744,448 bp


Aeromonas salmonicida subsp. salmonicida A449

Aeromonas salmonicida subsp. salmonicida A449, complete genome.
NC_009348
4,702,402 bp


Aeromonas salmonicida subsp. salmonicida A449 plasmid pAsa4, complete sequence.
NC_009349
166,749 bp


Aeromonas salmonicida subsp. salmonicida A449 plasmid pAsa5, complete sequence.
NC_009350
155,098 bp


Aeromonas salmonicida salmonicida A449 plasmid pAsa3, complete sequence.
NC_004924
5,616 bp


Aeromonas salmonicida salmonicida A449 plasmid pAsa1, complete sequence.
NC_004923
5,424 bp


Aeromonas salmonicida salmonicida A449 plasmid pAsa2, complete sequence.
NC_004925
5,247 bp


Aeropyrum pernix K1

Aeropyrum pernix, complete genome.
NC_000854
1,669,695 bp


Aggregatibacter actinomycetemcomitans D11S-1

Aggregatibacter actinomycetemcomitans D11S-1, complete genome.
NC_013416
2,105,764 bp


Aggregatibacter aphrophilus NJ8700

Aggregatibacter aphrophilus NJ8700, complete genome.
NC_012913
2,313,035 bp


Agrobacterium radiobacter K84

Agrobacterium radiobacter K84 chromosome 1, complete genome.
NC_011985
4,005,130 bp


Agrobacterium radiobacter K84 chromosome 2, complete genome.
NC_011983
2,650,913 bp


Agrobacterium radiobacter K84 plasmid pAtK84c, complete sequence.
NC_011987
388,169 bp


Agrobacterium radiobacter K84 plasmid pAtK84b, complete sequence.
NC_011990
184,668 bp


Agrobacterium radiobacter K84 plasmid pAgK84, complete sequence.
NC_011994
44,420 bp


Agrobacterium tumefaciens C58

Agrobacterium tumefaciens strain C58 circular chromosome, complete sequence.
NC_003062
2,841,581 bp


Agrobacterium tumefaciens strain C58 linear chromosome, complete sequence.
NC_003063
2,074,782 bp


Agrobacterium tumefaciens strain C58 plasmid AT, complete sequence.
NC_003064
542,869 bp


Agrobacterium tumefaciens str. C58 (Cereon) plasmid Ti, complete sequence.
NC_003065
214,331 bp


Agrobacterium vitis S4

Agrobacterium vitis S4 chromosome 1, complete genome.
NC_011989
3,726,375 bp


Agrobacterium vitis S4 chromosome 2, complete genome.
NC_011988
1,283,187 bp


Agrobacterium vitis S4 plasmid pAtS4e, complete sequence.
NC_011981
631,775 bp


Agrobacterium vitis S4 plasmid pTiS4, complete sequence.
NC_011982
258,824 bp


Agrobacterium vitis S4 plasmid pAtS4c, complete sequence.
NC_011984
211,620 bp


Agrobacterium vitis S4 plasmid pAtS4b, complete sequence.
NC_011991
130,435 bp


Agrobacterium vitis S4 plasmid pAtS4a, complete sequence.
NC_011986
78,730 bp


Akkermansia muciniphila ATCC BAA-835

Akkermansia muciniphila ATCC BAA-835, complete genome.
NC_010655
2,664,102 bp


Alcanivorax borkumensis SK2

Alcanivorax borkumensis SK2, complete genome.
NC_008260
3,120,143 bp


Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446

Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446, complete genome.
NC_013205
3,018,755 bp


Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 plasmid pAACI01, complete sequence.
NC_013206
91,726 bp


Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 plasmid pAACI02, complete sequence.
NC_013207
87,298 bp


Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 plasmid pAACI03, complete sequence.
NC_013208
7,907 bp


Aliivibrio salmonicida LFI1238

Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
NC_011312
3,325,165 bp


Aliivibrio salmonicida LFI1238 chromosome 2, complete genome.
NC_011313
1,206,461 bp


Aliivibrio salmonicida LFI1238 plasmid pVSAL840, complete sequence.
NC_011311
83,540 bp


Aliivibrio salmonicida LFI1238 plasmid pVSAL320, complete sequence.
NC_011314
30,807 bp


Aliivibrio salmonicida LFI1238 plasmid pVAL43, complete sequence.
NC_011315
5,360 bp


Aliivibrio salmonicida LFI1238 plasmid pVSAL43, complete sequence.
NC_011316
4,327 bp


Alkalilimnicola ehrlichei MLHE-1

Alkalilimnicola ehrlichei MLHE-1, complete genome.
NC_008340
3,275,944 bp


Alkaliphilus metalliredigens QYMF

Alkaliphilus metalliredigens QYMF, complete genome.
NC_009633
4,929,566 bp


Alkaliphilus oremlandii OhILAs

Alkaliphilus oremlandii OhILAs, complete genome.
NC_009922
3,123,558 bp


Allochromatium vinosum DSM 180

Allochromatium vinosum DSM 180 chromosome, complete genome.
NC_013851
3,526,903 bp


Allochromatium vinosum DSM 180 plasmid pALVIN01, complete sequence.
NC_013852
102,242 bp


Allochromatium vinosum DSM 180 plasmid pALVIN02, complete sequence.
NC_013862
39,929 bp


Alteromonas macleodii 'Deep ecotype'

Alteromonas macleodii 'Deep ecotype', complete genome.
NC_011138
4,412,282 bp


Aminobacterium colombiense DSM 12261

Aminobacterium colombiense DSM 12261 chromosome, complete genome.
NC_014011
1,980,592 bp


Ammonifex degensii KC4

Ammonifex degensii KC4, complete genome.
NC_013385
2,129,237 bp


Ammonifex degensii KC4 plasmid pADEG01, complete sequence.
NC_013386
27,830 bp


Anabaena variabilis ATCC

Anabaena variabilis ATCC 29413, complete genome.
NC_007413
6,365,727 bp


Anabaena variabilis ATCC 29413 plasmid A, complete sequence.
NC_007410
366,354 bp


Anabaena variabilis ATCC 29413 plasmid C, complete sequence.
NC_007412
300,758 bp


Anabaena variabilis ATCC 29413 plasmid B, complete sequence.
NC_007411
35,762 bp


Anabaena variabilis ATCC 29413

Anabaena variabilis ATCC 29413, complete genome.
NC_014000
37,151 bp


Anaerocellum thermophilum DSM 6725

Anaerocellum thermophilum DSM 6725, complete genome.
NC_012034
2,919,718 bp


Anaerocellum thermophilum DSM 6725 plasmid pATHE01, complete sequence.
NC_012036
8,291 bp


Anaerocellum thermophilum DSM 6725 plasmid pATHE02, complete sequence.
NC_012037
3,653 bp


Anaerococcus prevotii DSM 20548

Anaerococcus prevotii DSM 20548, complete genome.
NC_013171
1,883,067 bp


Anaerococcus prevotii DSM 20548 plasmid pAPRE01, complete sequence.
NC_013164
115,566 bp


Anaeromyxobacter dehalogenans 2CP-1

Anaeromyxobacter dehalogenans 2CP-1, complete genome.
NC_011891
5,029,329 bp


Anaeromyxobacter dehalogenans 2CP-C

Anaeromyxobacter dehalogenans 2CP-C, complete genome.
NC_007760
5,013,479 bp


Anaeromyxobacter sp. Fw109-5

Anaeromyxobacter sp. Fw109-5, complete genome.
NC_009675
5,277,990 bp


Anaeromyxobacter sp. K

Anaeromyxobacter sp. K, complete genome.
NC_011145
5,061,632 bp


Anaplasma centrale str. Israel

Anaplasma centrale str. Israel, complete genome.
NC_013532
1,206,806 bp


Anaplasma marginale St. Maries

Anaplasma marginale str. St. Maries, complete genome.
NC_004842
1,197,687 bp


Anaplasma marginale str. Florida

Anaplasma marginale str. Florida, complete genome.
NC_012026
1,202,435 bp


Anaplasma phagocytophilum HZ

Anaplasma phagocytophilum HZ, complete genome.
NC_007797
1,471,282 bp


Anoxybacillus flavithermus WK1

Anoxybacillus flavithermus WK1, complete genome.
NC_011567
2,846,746 bp


Aquifex aeolicus VF5

Aquifex aeolicus complete genome.
NC_000918
1,551,335 bp


Aquifex aeolicus plasmid ece1, complete sequence.
NC_001880
39,456 bp


Archaeoglobus fulgidus DSM 4304

Archaeoglobus fulgidus DSM 4304, complete genome.
NC_000917
2,178,400 bp


Archaeoglobus profundus DSM 5631

Archaeoglobus profundus DSM 5631, complete genome.
NC_013741
1,560,622 bp


Archaeoglobus profundus DSM 5631 plasmid pArcpr01, complete sequence.
NC_013742
2,801 bp


Arcobacter butzleri RM4018

Arcobacter butzleri RM4018, complete genome.
NC_009850
2,341,251 bp


Arthrobacter aurescens TC1

Arthrobacter aurescens TC1, complete genome.
NC_008711
4,597,686 bp


Arthrobacter aurescens TC1 plasmid TC1, complete sequence.
NC_008712
328,237 bp


Arthrobacter aurescens TC1 plasmid TC2, complete sequence.
NC_008713
300,725 bp


Arthrobacter chlorophenolicus A6

Arthrobacter chlorophenolicus A6, complete genome.
NC_011886
4,395,537 bp


Arthrobacter chlorophenolicus A6 plasmid pACHL01, complete sequence.
NC_011879
426,858 bp


Arthrobacter chlorophenolicus A6 plasmid pACHL02, complete sequence.
NC_011881
158,475 bp


Arthrobacter sp. FB24

Arthrobacter sp. FB24 chromosome 1, complete sequence.
NC_008541
4,698,945 bp


Arthrobacter sp. FB24 plasmid 1, complete sequence.
NC_008537
159,538 bp


Arthrobacter sp. FB24 plasmid 2, complete sequence.
NC_008538
115,507 bp


Arthrobacter sp. FB24 plasmid 3, complete sequence.
NC_008539
96,488 bp


Aster yellows witches'-broom phytoplasma AYWB

Aster yellows witches'-broom phytoplasma AYWB, complete genome.
NC_007716
706,569 bp


Aster yellows witches'-broom phytoplasma AYWB plasmid pAYWB-III, complete sequence.
NC_007719
5,104 bp


Aster yellows witches'-broom phytoplasma AYWB plasmid pAYWB-IV, complete sequence.
NC_007720
4,316 bp


Aster yellows witches'-broom phytoplasma AYWB plasmid pAYWB-II, complete sequence.
NC_007718
4,009 bp


Aster yellows witches'-broom phytoplasma AYWB plasmid pAYWB-I, complete sequence.
NC_007717
3,972 bp


Atopobium parvulum DSM 20469

Atopobium parvulum DSM 20469, complete genome.
NC_013203
1,543,805 bp


Azoarcus sp. BH72

Azoarcus sp. BH72, complete genome.
NC_008702
4,376,040 bp


Azoarcus sp. EbN1

Azoarcus sp. EbN1, complete genome.
NC_006513
4,296,230 bp


Azoarcus sp. EbN1 plasmid 2, complete sequence.
NC_006824
223,670 bp


Azoarcus sp. EbN1 plasmid 1, complete sequence.
NC_006823
207,355 bp


Azorhizobium caulinodans ORS 571

Azorhizobium caulinodans ORS 571, complete genome.
NC_009937
5,369,772 bp


Azospirillum sp. B510

Azospirillum sp. B510, complete genome.
NC_013854
3,311,395 bp


Azospirillum sp. B510 plasmid pAB510a, complete sequence.
NC_013855
1,455,109 bp


Azospirillum sp. B510 plasmid pAB510b, complete sequence.
NC_013856
723,779 bp


Azospirillum sp. B510 plasmid pAB510c, complete sequence.
NC_013857
681,723 bp


Azospirillum sp. B510 plasmid pAB510d, complete sequence.
NC_013858
628,837 bp


Azospirillum sp. B510 plasmid pAB510e, complete sequence.
NC_013859
537,299 bp


Azospirillum sp. B510 plasmid pAB510f, complete sequence.
NC_013860
261,596 bp


Azotobacter vinelandii DJ

Azotobacter vinelandii DJ, complete genome.
NC_012560
5,365,318 bp


The BacMap database was last updated on Monday April 26, 2010; It currently contains 2023 chromosomes.

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