LOCUS NC_002662 2365589 bp DNA circular BCT 11-MAR-2010 DEFINITION Lactococcus lactis subsp. lactis Il1403, complete genome. ACCESSION NC_002662 VERSION NC_002662.1 GI:15671982 DBLINK Project:72 KEYWORDS . SOURCE Lactococcus lactis subsp. lactis Il1403 ORGANISM Lactococcus lactis subsp. lactis Il1403 Bacteria; Firmicutes; Lactobacillales; Streptococcaceae; Lactococcus. REFERENCE 1 (bases 1 to 2365589) AUTHORS Bolotin,A., Wincker,P., Mauger,S., Jaillon,O., Malarme,K., Weissenbach,J., Ehrlich,S.D. and Sorokin,A. TITLE The complete genome sequence of the lactic acid bacterium Lactococcus lactis ssp. lactis IL1403 JOURNAL Genome Res. 11 (5), 731-753 (2001) PUBMED 11337471 REFERENCE 2 (bases 1 to 2365589) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (19-SEP-2001) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 2365589) AUTHORS Bolotin,A., Wincker,P., Mauger,S., Jaillon,O., Malarme,K., Weissenbach,J., Ehrlich,S.D. and Sorokin,A. TITLE Direct Submission JOURNAL Submitted (09-JAN-2001) INRA, Genetique Microbienne, Domaine de Vilvert, Jouy en Josas 78352, France COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from AE005176. regions of prohages are represented by misc_features. Complete genome of 5 L.lactis prophages can be found as separate proviral genome records: 34907..49847 NC_002669 - Bacteriophage bIL310 447143..484092 NC_002668 - Bacteriophage bIL309 502595..517773 NC_002671 - Bacteriophage bIL312 1036549..1072086 NC_002666 - Bacteriophage bIL285 1415283..1457116 NC_002667 - Bacteriophage bIL286. COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..2365589 /organism="Lactococcus lactis subsp. lactis Il1403" /mol_type="genomic DNA" /strain="IL1403" /sub_species="lactis" /db_xref="taxon:272623" misc_feature 1..2365589 /note="REFSEQ gene predictions performed by GeneMark 2.4/GeneMark.hmm 2.0 with comparison to original submitter provided annotation. tRNA predictions performed by tRNAscan-SE v.1.23. rRNA predictions performed by BLAST" gene 358..1725 /gene="dnaA" /locus_tag="L0274" /db_xref="GeneID:1113599" CDS 358..1725 /gene="dnaA" /locus_tag="L0274" /note="binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself." /codon_start=1 /transl_table=11 /product="chromosomal replication initiation protein" /protein_id="NP_266157.1" /db_xref="GI:15671983" /db_xref="GeneID:1113599" /translation="MASLNENQKFWARVTELAQQSIGKQAYDFFIEPAQLMSVEQDTA NILLDSGMKKDYWKKQSDLITTAGFEVFGRMIDYELYANDELTELELHRLNNQSSIEE QPRSTAKPASPLVSGLNEKYNFENFVQGPGNRWTLAAAIAVADKPGDTYNPLFIYGGA GLGKTHLMHAIGNQILTDNPTARIKYVSSENFVNDYVNATRKNQMENFENTYRNLDLL LLDDVQFFSDKEGTKNEFFNTFNALYDKGSQIVLTSDRIPQELNNLEDRLVSRFSWGL TTDITAPDYETRMAILLIKSESSRLEFPSETLSYIAGQIDSNVRELEGALNRVEFVAR ANGIAVVDIETASQALRSLKNATQQSLSNLTIKKIQDEVANYYHISFSDLVGPKRPKE IAFPRQIAMYLVRELLGTSLPAIGTAFGGRDHTTVMYAYKQISDKMKNDMDVQKDIDS IKRKF" gene 1882..3024 /gene="dnaN" /locus_tag="L0275" /db_xref="GeneID:1113600" CDS 1882..3024 /gene="dnaN" /locus_tag="L0275" /EC_number="2.7.7.7" /note="binds the polymerase to DNA and acts as a sliding clamp" /codon_start=1 /transl_table=11 /product="DNA polymerase III subunit beta" /protein_id="NP_266158.1" /db_xref="GI:15671984" /db_xref="GeneID:1113600" /translation="MIKFSINKNAFQNALRITKQAIGSKVTIPALTKLKIEVEENGIT LIGSNGQISIKNFLPVDNKDASMLISGTGSVLLEAAFFENVVSQLPEVTLEFTEKEQK QVLLTSGKSEITLKGLDSEIYPHLQEISEGSSLKMKVKVLKEIFTETVFAVSTQENRP IFTGVHLETLSTGELKAVATDSHRMSQRLLPLEDSELKFDVILPSKSINSFKNVFTND EEEIEIFISGSQMLFRNETISYYSRLIEGSYPDTNRLIPNEADYTLDLVFDAAQLRHT MDRARLLTVMTTNGTVKLTVSGDSVVTTANSPEVGSVHEELTALSKEGNDLAISFNPE YLIDALKVIKAPEVRIRFISNVRPFTLQPRNEESGFVQLITPVRTN" gene 3130..6429 /gene="rexB" /locus_tag="L0252" /db_xref="GeneID:1113601" CDS 3130..6429 /gene="rexB" /locus_tag="L0252" /function="degradation of DNA" /experiment="experimental evidence, no additional details recorded" /note="evidence experimental PMID:9435243; exonuclease is specifically blocked by the putative lactococcal Chi site (5'-GCGCGTG-3'); RexAB-mediated recombination stimulated approximately 27-fold by lactococcal Chi" /codon_start=1 /transl_table=11 /product="subunit B of ATP-dependent exonuclease" /protein_id="NP_266159.1" /db_xref="GI:15671985" /db_xref="GeneID:1113601" /translation="MEILYTEITQDLTEGLLEISLEELEKNRKVYYIVPSSMSFEKEK EILERLAKGSDSAVFDLLVTRFKQLPYYFDKREKATTKTELGTAGLSMLFRRVLRSFS KEEIPLYFSLQDSAGFLEMLIQLRTELLTANLSVENLPDSPKNQELKKILSRFEEKLA NDYANYSEFGDFTSRLADGEFDFQLKDVTIVIDGYTRFSAEEELFIESIQDRVARFVI GTYSDENSLTAGSETIYISTSQMIGRFRSKFPVELRKMAFSSVNEVYNKLTKLLDLDS RFAISDQNIEINSADAKYFRIWEAENQKVEIEGVAKEIRQKISQGAFFKDFTVLVGDP AAYEITLKEIFELYEIPFFYAQEESMSQHPLVIFFESLLSIKKNNYGTDDVVNLLKSK VYTDVNLDEEVIDYFEYYVQKYKISGRKKFTEAFNESEFSKIELVNQLRENLLGNDSP LQVFLGTNRQKTGKKWVSDLQVLLENGNVMANMNTYFSEAESENKHQMADKHEQVWQM LISILNEFLAVFSDEKLKSVEFLDILLAGLKNAKYRQIPANVDVVNIKDYELVEPKTN KYIYAIGLSQTNFPRIKKNSTLLSDEERLEINQTTDENQFIEQLNVVNYQKNQFTVLS LVNSAKETLVLSMPQIMANEQGEFSPVFQLFLNHSDEKILQKIQEVNLFESLEHIGNS RSVISMIGKIERELVETEEKNDDKRVFWSSIFRILVKSNPDFQKILLDLAKDIDTVNL SQETLDQIYGDKLYASVSSFERFYNCEYQYFLETTLGLETFENIDINSKIVGNFFHEV FEKVMQEEALSAENFDEKLTKVLHDVDSNYSRYFTHDATARFTWTNLEEIVRQTATVL KETVSTDELKTLLTESSFGLPKSELGNFSVDDIYLRGRIDRLDQLSSDYLGAIDYKSS AHSFKLQDAYDGLSLQFMTYLDVIKEAFPNQKIWGALYLQFKNQPINLSEINHLSEIA GLLKESMRYDGLVLEEAADQIKAIENITVKKSNIYNQEEFEQLLKLNENHYQHAGQRL KSGQIAINPIMKRSEGIDQTGNVRGCRYCPLKSICRFEANVHMNDHSREIGQKSQAEI LAELKGEGRNE" gene 6422..10033 /gene="rexA" /locus_tag="L0251" /db_xref="GeneID:1113602" CDS 6422..10033 /gene="rexA" /locus_tag="L0251" /codon_start=1 /transl_table=11 /product="ATP-dependent exonuclease subunit a" /protein_id="NP_266160.1" /db_xref="GI:15671986" /db_xref="GeneID:1113602" /translation="MSEVKLTPEQNEAIHSSGKNILVSASAGSGKTFVMAQRIVEKVK QGIEIDRLFISTFTKKAASELRMRLERDLKKARQESSDENQACRLTLALQNLSNADIG TMDSFTQKLTKTNFNRVNIDPNFRILADQTESDLIRQEVFEQLVESYLSGDDGLNISK EKFEELIKNFSKDRNIAGFQKVVYTIYRFASATENPIKWLENQFLKGFETYKSLIDLS ADFSADIKENLLIFFELLETSLTNGVVAKKGAGRDKANLILDNKNELLEAITTKDFAT FTELFLSIDTDIRVGSSKDEILSALKKDFSVQKQDLVGSKSKPGEIRKFVDKIKHGQL IEKYQNQAFEIAENLQKFVIEFYQSYLERKKNENAFEYSDIAHFAIEILEENPDIRET LREHYDEIMIDEYQDTSHTQERMLELLSNGHNLFMVGDIKQSIYGFRLADPGLFLEKY KDYAKTENPNQLIRLKENFRSRGEVLTFTNDIFKHLMDEKLGEMTYGKEEALVQGNIT DYPVESEKDFYPELLLYKENTSDEETDESEVRISDGEIKGAAQEIKKLIEAGVEPKDI AILVRSKSNNNKIEDILLSYDIPVVLDEGRVDFLKSMEVLIMLDVLRAIDNPLYDLSL VAMLRSPLFGFNEDELTRISTQGSHDLRFWDKILLSLNKEGQNPELINPSLENKLKAF YKKFTEWRKLVNQVAIHDLLWKIYTETYYFDYVGALKNGEIRQANLQALAVRAESYES SGYKGLFKFVRLINKFMEQNNDLASVNIKLPQSAVRVMTFHKSKGLEFDYVFLMNLQS RFNDRDLKENVILSRENGLGMKLIADLKDEADVITDFPYALVKMETFPYMVNKDLKQR AALSEEMRVLYVAFTRAKKKLYLVGKIKETDKKSGLDLYDNASLEGKILEDKFRNSSR GFQHWILALQNATKLPIKLNVYTKEELEAEKLEFTSQPDFKKLVEESEKFDNIMAHSD EIQKAQKIMNYEYPHQAATELSSIQTPSQVKKRSYEKQLQVGEIQPKSEFTRVKKLDF SDFGPKKVTAAEIGSATHSFMQYADFSQADLFSFQATLDEMGFDEKIKNQIDIAKILT LFDTDFGQFLSENVDKTVKEAPFSMLRTDEFAKEQYIVRGICDGFVKLTDKIVLFDYK TDRFTSSSAISEIKERYRDQMNLYSEALKKAYDVNQVDKYLILLGGPQQVFVEKLDD" gene 10070..10270 /locus_tag="L200000" /db_xref="GeneID:1113603" CDS 10070..10270 /locus_tag="L200000" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_835283.1" /db_xref="GI:30023968" /db_xref="GeneID:1113603" /translation="MLEYELGSIVEMKKPHACTVKATGKKANAWEITRLGADIKIRCT NCNHEVMMSRFDFNKKIKKVLK" gene complement(10280..10837) /gene="yabA" /locus_tag="L10283" /db_xref="GeneID:1113604" CDS complement(10280..10837) /gene="yabA" /locus_tag="L10283" /note="belongs to the PBSX(XRE) family of transcription regulators" /codon_start=1 /transl_table=11 /product="transcription regulator" /protein_id="NP_266161.1" /db_xref="GI:15671987" /db_xref="GeneID:1113604" /translation="MLGENLQKARLAQKLTQEEVAKELYFSRQAISRWESNKTEPNFE TLIALAELYESDLSAFAQGIEPQKRKKHINLFAGFGLVFFNFVLGFWLIITTALILLA LYAIILALFLAPFIMIFAVATHNPHITFGNANGATGFDWWYWLVAIIACSLMVLVSPL IWRFTKLLYFWLIKYLKFNLKSVYN" gene 11119..12234 /gene="yyaL" /locus_tag="L0161" /gene_synonym="ychF" /db_xref="GeneID:1113605" CDS 11119..12234 /gene="yyaL" /locus_tag="L0161" /gene_synonym="ychF" /note="translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1" /codon_start=1 /transl_table=11 /product="GTP-dependent nucleic acid-binding protein EngD" /protein_id="NP_266162.1" /db_xref="GI:15671988" /db_xref="GeneID:1113605" /translation="MALTAGIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMV EVPDERLNKLTELIKPKKTVPTTFEFTDIAGIVKGASRGEGLGNKFLANIREVDAIIH VVRAFDDENVMRENNREDAFIDPMADIETINLELILADLESVNKRYARVEKVARTAKD KDAVAEFNVLKKLKPVLEDGKSARTIDFDEDEIKVLKSLFLLTSKPVLYVANVSEDEV GEPDNIEYVKQIREFAATENAEVAVISARVEEEISELEDDEKAEFLEAIGLKESGVDM LTRAAYHLLGLATYFTAGEKEVRAWTFKRGMKAPQMAGIIHTDFEKGFIRAVTMSYDD LLKYGSEKAVREAGRLREEGKEYVGQDGDIMEFRFNV" gene 12346..12669 /gene="yabB" /locus_tag="L12334" /db_xref="GeneID:1113606" CDS 12346..12669 /gene="yabB" /locus_tag="L12334" /note="belongs to the PBSX(XRE) family of transcription regulators" /codon_start=1 /transl_table=11 /product="transcription regulator" /protein_id="NP_266163.1" /db_xref="GI:15671989" /db_xref="GeneID:1113606" /translation="MEISQIIKENRKMKNLSQEELAKKMHISRQSISKWETGKSLPTT DQIILLSEIFDCSLDTLLKGDKKMEEKAKHEIDDKRTLKLIYKVGWGFIIPFLFTLKF ILHLF" gene 12924..13268 /gene="yabC" /locus_tag="L12912" /db_xref="GeneID:1113607" CDS 12924..13268 /gene="yabC" /locus_tag="L12912" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266164.1" /db_xref="GI:15671990" /db_xref="GeneID:1113607" /translation="MELTMTRALIRRRNLMRKVSVLVLGTALISGTAFASAQVFVSGG WNTNYIERFNPTITKATAHDNAQINQRHYSWAKVGKSATAFSNTVSANKIAQAKAIGA WNAGYSGWFVKL" gene 13281..15272 /gene="yabD" /locus_tag="L13272" /db_xref="GeneID:1113608" CDS 13281..15272 /gene="yabD" /locus_tag="L13272" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266165.1" /db_xref="GI:15671991" /db_xref="GeneID:1113608" /translation="MNKVIKFVLLVLFIVISISSANIVKNNFVDKQIEKNYDVQDFTQ IYLPSSISSDKNLISLVEGVSAKTGASFIFRSTYGGVKNDGKGHADLLKMDSKAVFYK TNYQTSDKKTFVSHGFSCQLWSEPLKNITTVEQENSDVYIKNKNIQTSLQDFLIALNQ KYGTHITSKKLTTRPSDFYPNNYTSFIGLTNDNLSLFIGISIVFFAIFLFVWLVGNNK KIATYRLNGVSAHRIGLRLFLKEFFIVTLLAYIFSSFLVFRGFNLQFSLQMFIMLLLV IIVSYISIVLVSSFSLANQINSKSFFKYSHYVLYAVKAFVFLITVSTTATLLYFVNAK LEITSKIGQEYAILYPEFSGYDGGQPLNLSCIDLFVYAEEHDGLYISDSSIDIVENDS LNDLQINDNYLSKFAIYSQDNQRVEINPDTNSGIILVSEKYKSQLSKIKKYYASSDSL AFFKGSTIKYYFIKDAQKLDLLDENSTKISPDLVEVYTRKNFTDKGNVTFQHNTVLKF KIRGTIEKTYQPLIPILKKNSALETHPSMIKIDDISKTDNLSTVGNPYNYAVTNGLVI LIFLSMILTTTVFYFETYKKKIAVKRLYGISFFVTYKTLFAIVLVQGSLYFAFALSQR DVNITLEGLGIYFVLEILIIILILLKLQKGLFLNVLKGE" gene 15274..15909 /gene="yabE" /locus_tag="L15262" /db_xref="GeneID:1113609" CDS 15274..15909 /gene="yabE" /locus_tag="L15262" /note="transport and binding protein" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_266166.1" /db_xref="GI:15671992" /db_xref="GeneID:1113609" /translation="MIEIEELTKSYKGHIIFDKLNLRIPEGKMTAIYGTSGAGKSTLL NIIGLIEDYDDGKYYFNGQFAPPFNSSLALKMRRNKISYLFQNFALLEDETIEKNLEI ALIYSRISKKEKRKKMKKLLLQVGINHRLNTKVYSLSGGEKQRVAIARALLKESQLIL ADEPTGSLDTENRNEVIALLRQEVDKGKAVVIVTHDSYLKEVSDLVIEIGE" gene 16110..16580 /gene="yabF" /locus_tag="L16101" /db_xref="GeneID:1113610" CDS 16110..16580 /gene="yabF" /locus_tag="L16101" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266167.1" /db_xref="GI:15671993" /db_xref="GeneID:1113610" /translation="MKIYIVGTVGSGKSTLARKLSEKNSMRVFHLDNIVHEGERNRTD KEVFESIECIFKNECFIIEDTLRERFIPLLDKVDKIIYLDLPKNLLKYRIIKRYVKQK LRLEKSTYRPSLQMLKQMFIWQKNGRSELINAQKNKIVLHNKREIRQFIKNFQK" gene 16598..17164 /gene="pth" /locus_tag="L0365" /db_xref="GeneID:1113611" CDS 16598..17164 /gene="pth" /locus_tag="L0365" /EC_number="3.1.1.29" /function="tRNA modification" /note="Enables the recycling of peptidyl-tRNAs produced at termination of translation" /codon_start=1 /transl_table=11 /product="peptidyl-tRNA hydrolase" /protein_id="NP_266168.1" /db_xref="GI:15671994" /db_xref="GeneID:1113611" /translation="MTKMIVGLGNPGDKYEKTKHNMGFMALDLLAKELNVDFKEEKPF MSLVASTFVNGEKLFLVKPLTFMNESGRSVAPLLKYYNIDEADLTVMHDDLDSPVGRV RLRQKGSSGGQNGIKSVITHVGSQTFNRVKIGIGRPKHGMTVGNHVLSGFDNEDKEIA QDGIFKAVDAMKFYLENGDFQKTMNKFN" gene 17165..20650 /gene="mfd" /locus_tag="L0263" /db_xref="GeneID:1113612" CDS 17165..20650 /gene="mfd" /locus_tag="L0263" /codon_start=1 /transl_table=11 /product="transcription-repair coupling factor" /protein_id="NP_266169.1" /db_xref="GI:15671995" /db_xref="GeneID:1113612" /translation="MNIIEFFDQNWQLQKWQQGFSKRERTLLTGLSGTAKSLVMANAY ENVADKYIIVTDSQFHANELYDELSTLLGEEKVFQFFSDDNIYAEFALASKDRVAYRL EALNFLLDEKSTGFLVVPFLALRSYLPSPENFLENYLLLTSGDEYDLSNLVNLLSKAG YEKTQRVMTPGEFSMRGDIVDIYPLDAENPVRLEFFGDEVDTIRSFDVESQRSLTSLE RLEIYPASDFILTDKEFDKGAKSLTEMTNLLTDPSAKSYMEEVISAAQNHYYHKDLRK FAEYFYDKKTSLLNYFPKNVQIFIDDFQKVNEMNNKLEMELADFILSEKAMERGFEGQ TYLLDTMAKVRNYKPATFFSNFQKGLGNLRFEQLYNFKQHSMQQFFGQLELFYTEVER FIKQEFTVVLAVSSEKLRKSLHELDLSLQEVDRESIQVGKVNLIDLQLSNGFNFLDEK LVVMTEHEIFGKMRKKKARKLNITNAERLKDYNELAVGDFVVHKNHGIGKYLGLQTLE VGGMHRDYLTIQYQNGDTISVPVDHLDLLSKYTAGEGKSPKINKLNDGRWRKTMSSVS KQVEDISDDLIKLYAERQAKKGFAFSPDDTSQEEFDSGFSYVETEDQMRSINEIKHDM ELERPMDRLLVGDVGFGKTEVAMRAAFKAINDGKQVAVLVPTTVLAEQHFNNFTERFI NFGVNVEVLSRFQTKTQQTEILAKLKKGRVDLIIGTHRLLSKDVEFFDLGLMIIDEEQ RFGVKHKERLKELKTQVDVLTLTATPIPRTLHMSMLGIRDLSVIETPPTNRYPVQTYV METNYGVVRDAVLREISRGGQVYYVYNRVDTIEQKVSQLEELIPEARIGFIHGQMTEV QLENTLLAFIAGDYDVLVATTIIETGVDIPNANTLFIENADMMGLSQLYQLRGRVGRS NRVAYAYFMYRPEKILSEVSEKRLEAIKGFTELGSGFKIAMRDLSIRGAGNLLGSEQS GFIDSVGFDLYSQLLEEAIHAKLGTSKQKRTSNVEISLELDAFIPAYYISDERQKIEI YKRIRQIDSREIYEELQEELVDRFGEYPDEVAYLLEIGLLKPFADNVLVEKIEKSRFE ATVTLEKVANTTYDPQDYFKALAKTSMKASVGEKYGKMTFRFKIENRNSVVLLSEIMN FIEELSKIRDSYENK" gene 20810..21280 /gene="yacI" /locus_tag="L20795" /db_xref="GeneID:1113613" CDS 20810..21280 /gene="yacI" /locus_tag="L20795" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266170.1" /db_xref="GI:15671996" /db_xref="GeneID:1113613" /translation="MDLKAAKAELREKSRPYQTYSYYLIIPIFIILVFLLSLVGYNKG TFGTIVFVFVIFAHVWASKLDLVRKRKHVAPILMYVTQGLGVVLMVLLVTEVSAGGTG NIALGLSSLILLPIEIIAIVFFFISANDIKKAYPTMKEDAKAARLEYQELRRSK" gene 21351..21668 /gene="yacB" /locus_tag="L1001" /db_xref="GeneID:1113614" CDS 21351..21668 /gene="yacB" /locus_tag="L1001" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266171.1" /db_xref="GI:15671997" /db_xref="GeneID:1113614" /translation="MNKGIFKQNEICYNQTMRLDKFLKVSRLIKRRPVAKEVADKGRI KINGKLAKSSSDVKFNDTIEIRFGNKIVEVRVAELKEFTRKEDADKMYEMISETRITE EVE" gene 21697..22071 /gene="yacC" /locus_tag="L21634" /db_xref="GeneID:1113615" CDS 21697..22071 /gene="yacC" /locus_tag="L21634" /note="similar to cell division protein DivIC of Bacillus subtilis; in Bacillus subtilis required for activation of genes expressed under the control of the sigma E and sigma F" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266172.1" /db_xref="GI:15671998" /db_xref="GeneID:1113615" /translation="MAKQVIQLNNKYTQKQKKRNLNPVPKRKHLGLILIVAILLFSLA SMSLIKSYETLHSQVALEQSAKKQYESLSKEVTIKKEEISKLQDPNYLQKFARSDGQE YSQSDEKVFTTDSPLIGSNGSK" gene 22071..22394 /gene="yacD" /locus_tag="L22059" /db_xref="GeneID:1113616" CDS 22071..22394 /gene="yacD" /locus_tag="L22059" /note="similar to Bacillus subtilis hypothetical 14.2 kDa protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266173.1" /db_xref="GI:15671999" /db_xref="GeneID:1113616" /translation="MIGQVENITRFGLFVKISTDKLDESTEKLADKAVSKNRGLLRWS QIPKNVPKVQIGDLIGVEISNIHEDGKVDLNYQEKIFKNVYAEFLETSHQRLTELEQK NRELN" gene 22532..23881 /gene="yacG" /locus_tag="L22496" /db_xref="GeneID:1113617" CDS 22532..23881 /gene="yacG" /locus_tag="L22496" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266174.1" /db_xref="GI:15672000" /db_xref="GeneID:1113617" /translation="MLGKVLIMQKQRTKINSGVALVMLLMIITGFFAFSQTRYFADKK VSKSKNIVAADKVTDKEKETETWTSIPQRAVAYQELTTYEDSNLTKSVGKIPAKTQLD IPEIVGKSFKLKTGKYISTDKKAVISDLTISRESINTTIYTDKSVNVFYNPVTTYDNQ IMTNLSGTHQLSADKMAKTNWGTYYEVSLDNGQKGWVSENDISLENPKIKQVQALLNQ KYNDKKYSIYVKELDDKFTAGVNQEQKMYSASLSKIPILYWTQKRLNEGLASLDDKLL YTPAINTFYGSYKPEGTGNLPKTADNKYYSLQDVINRTAKLSDNVGSNMLAYYETQEF NPNYQKEINRIAGQEWNPKERNASAQMVGRMLEALYNEGGASFNALFDTSFDDVKIRA GVPKNISVAHKIGGADTDNHDAAIVFASKPYLLVIETDGATDDEIKAISQDVYGVMK" gene 23878..25149 /gene="mesJ" /locus_tag="L1002" /db_xref="GeneID:1113618" CDS 23878..25149 /gene="mesJ" /locus_tag="L1002" /note="cell cycle protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266175.1" /db_xref="GI:15672001" /db_xref="GeneID:1113618" /translation="MTPAQRKFLKIVKDEHYFDKDSKILLALSGGKDSMTLFNWLYDL KEVLGIELGLAHINHGLREESKFEEIALREMATKLKVPIYVDKFTGEFTEKNARDFRY QFFEKLMIGENYNILLTAHHQGDLVETVLMRQITGRPLRSLQGIADRQPFAGGQLIRP LLKFTKEELDAQTYYEDSTNQGLDYFRNRIRNQLIPELKKENPQFSQSISDLSSEIKK ALAVINQKISELEIVDEKISSKKFISQTKELQHFILQAFFAQYPEIEVSKKKFAELLH IINRPQQYFAKLNKEFYFVKTKDFFYLEKIQLERENSVEIVSENPQDESFMEVYLPLE GEIEIRKRQPGDQILINGHHKKLRKFFIDNKVPLKARENPLIFVDKKLYAIVGLACSD LSKMLKNDKIRRILWVKPSIGEEINDARKKS" gene 25130..25681 /gene="hpt" /locus_tag="L25115" /db_xref="GeneID:1113619" CDS 25130..25681 /gene="hpt" /locus_tag="L25115" /EC_number="2.4.2.8" /function="biosynthesis or salvage of purines or pyrimidines" /experiment="experimental evidence, no additional details recorded" /note="evidence experimental PMID:1465108" /codon_start=1 /transl_table=11 /product="hypoxanthine phosphoribosyltransferase" /protein_id="NP_266176.1" /db_xref="GI:15672002" /db_xref="GeneID:1113619" /translation="MLEKNLDKAIEKVLVSEEEIIEKSKELGEILTKEYEGKNPLVLG ILRGSVPFLAELIKHIDCHLETDFMTVSSYHGGTKSSGEVKLILDVDTAVKGRDILIV EDIIDTGRTLKYLKELLEHRGANVKIVTLLDKPEGRIVEIKPDYSGFTIPNEFVVGFG LDYEENYRNLPYVGVLKPEVYNK" gene 25887..27974 /gene="ftsH" /locus_tag="L0204" /db_xref="GeneID:1113620" CDS 25887..27974 /gene="ftsH" /locus_tag="L0204" /function="salt-, heat- and cold-resistance" /experiment="experimental evidence, no additional details recorded" /note="cell division protein; evidence experimental PMID:8000529" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266177.1" /db_xref="GI:15672003" /db_xref="GeneID:1113620" /translation="MNNNKQPKQGNFVKNILMWVILAIVVVVGFNFFFSSNQSSVDKI SYSQLMTKLDGNKIENVTMQPSDSLITVTGEYKEPVKVKGTNNFPLLGNSSSEVKNFQ AYIIPTDSVVKDIQNAAKSNDVKLSVVQASSSGMWVQILSYIIPMLLFVGIFWLMMGG MGARGGGGGGNPMSFGKSRAKQQDGKTSKVRFADVAGSEEEKQELVEVVDFLKNPKKY HDLGARIPAGVLLEGPPGTGKTLLAKAVAGEAGVPFYSISGSDFVEMFVGVGASRVRD LFENAKKTAPSIIFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLVEMDGFQDDGNSVI VIAATNRSDVLDPALLRPGRFDRKVLVGAPDVKGREAVLKVHAKNKPLASDVDLHNVA TQTPGYVGADLENVLNEAALVAARQNKKEINAADIDEGMDRAMAGPAKKDRIQSMRER EIVAYHEAGHAIVGLVLENGSTVRKVTVVPRGRIGGYMLALPDEEIMQPTNFHLQDQL ASLMGGRLGEEIVFGVATPGASNDIEKATHIARSMVTEYGMSKKLGMVSYEGDHQVFI GRDYGQTKTYSEATAVMIDDEVRRILGEAYDRAKEAIETHREQHKAIAEALLKYETLD AKQIMSLFKTGKMPDEAAAAEVPEPKTFEESLKDANANVDDFSNINIYNGDEKTDSKP EENKEKSEDETAE" gene 28196..28267 /locus_tag="L200081" /db_xref="GeneID:1113538" tRNA 28196..28267 /locus_tag="L200081" /product="tRNA-Glu" /db_xref="GeneID:1113538" gene 28273..28362 /locus_tag="L200082" /db_xref="GeneID:1113539" tRNA 28273..28362 /locus_tag="L200082" /product="tRNA-Ser" /db_xref="GeneID:1113539" gene 28373..28446 /locus_tag="L200083" /db_xref="GeneID:1113540" tRNA 28373..28446 /locus_tag="L200083" /product="tRNA-Met" /db_xref="GeneID:1113540" gene 28451..28523 /locus_tag="L200084" /db_xref="GeneID:1113541" tRNA 28451..28523 /locus_tag="L200084" /product="tRNA-Phe" /db_xref="GeneID:1113541" gene 28535..28605 /locus_tag="L200085" /db_xref="GeneID:1113542" tRNA 28535..28605 /locus_tag="L200085" /product="tRNA-Gly" /db_xref="GeneID:1113542" gene 28620..28693 /locus_tag="L200086" /db_xref="GeneID:1113543" tRNA 28620..28693 /locus_tag="L200086" /product="tRNA-Ile" /db_xref="GeneID:1113543" gene 28818..28891 /locus_tag="L200087" /db_xref="GeneID:1113544" tRNA 28818..28891 /locus_tag="L200087" /product="tRNA-Asn" /db_xref="GeneID:1113544" misc_feature 29041..30863 /note="similar to mannitol-specific enzyme II" gene 30922..32859 /gene="mtlR" /locus_tag="L30901" /db_xref="GeneID:1113621" CDS 30922..32859 /gene="mtlR" /locus_tag="L30901" /note="LysR-family regulator; probable regulator of mtl operon" /codon_start=1 /transl_table=11 /product="LysR family transcription regulator" /protein_id="NP_266178.1" /db_xref="GI:15672004" /db_xref="GeneID:1113621" /translation="MFLTSREQKLIQTFLKRGKLTIAEMMEITDTSRRTLYRDLNNLQ KSLPENISLENTDEGYFLKGDINQLTQAHELIDYSISERLYGELLLLIENKASIASLT DYFGISQPTVTSDLKQIEQALFENELVLIRDRGLKLKGAEENIRPVFVAVIYNSASIQ ELLLNQLSNNKILRIIDLNKFKQVNEAFKRIDLPEKMTDKVKVLMQLFCLVVLLRLDE GDSVSSETLGRPSKQALNFVNKLLTELPVTKFVVSEITYLASVYDILYFGFGRELLFM EKFDTDFSYKIRQLIDKVSTILEIEFGKDDRLYGLLYAHLKESEMLPVLFPKKENDFI KKINKDNPEIYKTVKESLREVFDKNFSEMEIAFISLHFVATLERSDLVLPLSAVLVSS RGRISCEFIMSNLRKNFPFLKKIELIQSSIHITQEKYDVIFTTEKELDYIYINPMLDQ KNLENIRHQLRLIQQKSRALTSDSEKEKNFLNLNDLFSIGNEILKSFEILSLENKAEL HDTVKQIIQRVNPEDSGELVHLVEERFKETHLAIPETKIALFHAVHSSISSPMFKIFD LSQPIEGIAMDHQAIQIGRVLLLLAPPEVPEYVSFLLGKISSSIIENKLYTRIYDSGN YEIVSELLREIIIEAVKHYDD" gene 32907..33338 /gene="mtlF" /locus_tag="L32907" /db_xref="GeneID:1113622" CDS 32907..33338 /gene="mtlF" /locus_tag="L32907" /EC_number="2.7.1.69" /note="transport and binding protein; PTS system" /codon_start=1 /transl_table=11 /product="mannitol-specific PTS system IIA component" /protein_id="NP_266179.1" /db_xref="GI:15672005" /db_xref="GeneID:1113622" /translation="MEIQKSLIKINQNFSNKEEAIKYCGSLLVDGGYVKPNYISAMIE RDRELSVYMGNFIAIPHGTDESKKEVLKTGVAIVQVPRGVNFGTVENPKIATMLFGIA GIKEEHLELIQKISIFCADVDNVVKLADAQTIEEIAKYFEN" gene 33476..34633 /gene="mtlD" /locus_tag="L33416" /db_xref="GeneID:1113623" CDS 33476..34633 /gene="mtlD" /locus_tag="L33416" /EC_number="1.1.1.17" /note="energy metabolism" /codon_start=1 /transl_table=11 /product="mannitol-1-phosphate 5-dehydrogenase" /protein_id="NP_266180.1" /db_xref="GI:15672006" /db_xref="GeneID:1113623" /translation="MKKAVHFGAGNIGRGFIGEILSKNGFDIHFVDTNKSIIAELNNR HSYEIGIASSEHEKISVKAVSGINNSENPEAVIEAIAKADILTTAIGPNVLPYIAELI AKGLQKRKEEKVQSPLDIIACENMIGGSEFLEEKVSDYLSESDKLYLSKFIGFPNAAV DRIVPAQKHKDVLYVEVEPFSEWVIDASHLKNKEIKLEGVHYTTDLEPFIERKLFSVN SGHAAVAYSSAYKGYKTILEGLQDEEILNILKAVQKETRALLLAKWAQYFKQDELIKY HELIISRFSNPEIIDEVSRVARTPIRKLGYDERFIRPIRELNDRKLSYQNHLDIVGKI FAYHDENDAQAIQLQEKLKITELPMLIEEVTGLSNQKLILEIEKVINHYKK" misc_feature 34907..49847 /note="Bacteriophage bIL310" /db_xref="taxon:151538" gene complement(35516..35839) /gene="ps101" /locus_tag="L35519" /db_xref="GeneID:1113624" CDS complement(35516..35839) /gene="ps101" /locus_tag="L35519" /note="similar to bacterial sigma factors" /codon_start=1 /transl_table=11 /product="prophage ps1 protein 01" /protein_id="NP_266181.1" /db_xref="GI:15672007" /db_xref="GeneID:1113624" /translation="MNKTEFNIRLYLSGVMESWTDRIDSTGEETPQRFILNAMTELFE SLSDDDIELIRLRYTERLTLSEVASRYLLNERTVRNHTNPAIKQVKEIIKKATEQAQH AREVD" gene complement(35864..36274) /gene="ps102" /locus_tag="L35867" /db_xref="GeneID:1113625" CDS complement(35864..36274) /gene="ps102" /locus_tag="L35867" /note="similar to a hypothetical protein of Lactococcus lactis subsp. cremoris S114 Y11901" /codon_start=1 /transl_table=11 /product="prophage ps1 protein 02" /protein_id="NP_266182.1" /db_xref="GI:15672008" /db_xref="GeneID:1113625" /translation="MKDKTDRIISDYINGRTQAKIKAIESRYIYRVKQDNLGIRTAYK GTAEPEGNTLDKERMEEDKELIGLRRTLELLGALYNTLTVSEKRIIELRYKGYNGYTW YRVAMELESAGIDIPIKRAKKIYFAFKEDVSRVL" gene complement(36271..36714) /gene="ps103" /locus_tag="L36274" /db_xref="GeneID:1113626" CDS complement(36271..36714) /gene="ps103" /locus_tag="L36274" /note="prophage ps1 protein 03; essential for phage DNA maturation and packaging" /codon_start=1 /transl_table=11 /product="terminase subunit" /protein_id="NP_266183.1" /db_xref="GI:15672009" /db_xref="GeneID:1113626" /translation="MTPKQRKFCDEYIKTGNATQSAINAGYSQKTAKSIGAENLTKPD LKKYIDSKLKDISNNAIATAEETLTILTQIVRGEHTEQVITAEGDVIDKHPDTNQVIR ASAEILKRYPLTQDINIKGNLKVSNPFENLTEEELRTLASREGEA" gene complement(36847..37428) /gene="ps104" /locus_tag="L36850" /db_xref="GeneID:1113627" CDS complement(36847..37428) /gene="ps104" /locus_tag="L36850" /codon_start=1 /transl_table=11 /product="prophage ps1 protein 04" /protein_id="NP_266184.1" /db_xref="GI:15672010" /db_xref="GeneID:1113627" /translation="MSQNTKTILSNLFTLTSELSEPTSKLINIEGANETPANQKDLLE GLRENLVNLTEVLGLSVDELTETQEDEPQETVKSIIKEMQELTFAPHEISGNDTQVFA DLLTDSIERLIKALGLNEMSLSAESKNKPHELALKTQLQDLHALNHSMFKEDIHEVPR FTDGTIITAKDLADMNINALDNIAELIGFELEE" gene complement(37664..39292) /gene="ps105" /locus_tag="L37667" /db_xref="GeneID:1113628" CDS complement(37664..39292) /gene="ps105" /locus_tag="L37667" /note="prophage ps1 protein 05; similar to putative primase of Streptococcus thermophilus bacteriophage DT1" /codon_start=1 /transl_table=11 /product="DNA primase" /protein_id="NP_266185.1" /db_xref="GI:15672011" /db_xref="GeneID:1113628" /translation="MTDQLEKLVAETPQENVRSPKPKIEDFTDYGEDGKKVVNVAGYQ ECLKDWLEQEKEIINSPDYVKAHTQTLRAVKKLFFEHRNLFLSTPKEDGNAPKSLSPL DTARIIYKTLKVIKLDHQSGLLGVYNPELGIYETNENFFHRLIYWLEPSYSQARSKEV LFKLETLAEVKQQTTEAHLIPVANGIFNKKTQQLEPFSPKYVFTSTIATKYNDKAKVP NINGWNVDGWLLDLMSGDKELVSLLWQIISASTNGNYSYRKGVWLVGKGNDGKGTFQS LIMNLIGRENVASVKAEQFAERFALSQVVGKTCIIGDDSQVSYLDNAGNYFSVVTGDP VPIEAKGKQPTLAVFNKLVIQSTNFLPKFRNKSNGTYRRLLIVPFEKSFTADNDDWKI KDDYIKRKDVLEYVLKIALSLNFEKFDEPKATQGLLDDFKISNDNVLAFVNDMFEEFV SDFLPTAFISALYRAWCEDEGVKPFTKREFENKLPDYVKDQWKKTVQRPNSAGFNRAV DLHRANEMELFRRLFYWDDEKHKKVTKGYSRKKK" gene complement(39303..40097) /gene="ps106" /locus_tag="L39306" /db_xref="GeneID:1113629" CDS complement(39303..40097) /gene="ps106" /locus_tag="L39306" /note="similar to Orf1 of Streptococcus thermophilus bacteriophage SFi18" /codon_start=1 /transl_table=11 /product="prophage ps1 protein 06" /protein_id="NP_266186.1" /db_xref="GI:15672012" /db_xref="GeneID:1113629" /translation="MTPKEQALNCISRGFSVIAGYPVGKSERAIIKGSSSGSLDEITV SAWFDEIPNRNIMINLRNSGLICIDLDQHQNGQNGRNVFSRLWNEHSEGEILSTYVEK TPTGNGLHVFFKVPKTIFNSPLVSELADGVEIKTHFTPIYPSKRTDGDYIPLNDTETN EPLTFDSLCDCPDWLLEMIQRPQARATTGTSSRTYGAEMWELFNQGARKGNRNNDTNR ILHYWRKIGIDNNSCMDLLRTFNNRTSPPLPDDELATIWKSVFKMK" gene complement(40101..40430) /gene="ps107" /locus_tag="L40104" /db_xref="GeneID:1113630" CDS complement(40101..40430) /gene="ps107" /locus_tag="L40104" /codon_start=1 /transl_table=11 /product="prophage ps1 protein 07" /protein_id="NP_266187.1" /db_xref="GI:15672013" /db_xref="GeneID:1113630" /translation="MKITDLQTLDQNIIKFLAEHRGIDRAVKGKILAQALDIDFRTLQ SRIEYLHKQGCAIGSIDNGYFIPTNEDERRAGIIKKQRTGIAINNAVNGYTLAELDWI DQLFKEE" gene complement(40417..40611) /locus_tag="L200001" /db_xref="GeneID:1113631" CDS complement(40417..40611) /locus_tag="L200001" /codon_start=1 /transl_table=11 /product="prophage ps2 protein 12" /protein_id="NP_835284.1" /db_xref="GI:30023969" /db_xref="GeneID:1113631" /translation="MKITIDVLENESNKDNLEYLISDTSNEAMTVLMFTLIGEARQRA SYEQFLETITRIWGYLNEDN" gene complement(40608..40862) /gene="ps108" /locus_tag="L40611" /db_xref="GeneID:1113632" CDS complement(40608..40862) /gene="ps108" /locus_tag="L40611" /codon_start=1 /transl_table=11 /product="prophage ps1 protein 08" /protein_id="NP_266188.1" /db_xref="GI:15672014" /db_xref="GeneID:1113632" /translation="MIEHHQGYTARKRLRRNSFRTIGKHPYKMIHNARAVKYDLIQQF EASTSINLPSGVKSNLCTQVSPVLGKQLAIMKLQIKETKP" gene complement(40859..41098) /gene="ps109" /locus_tag="L40862" /db_xref="GeneID:1113633" CDS complement(40859..41098) /gene="ps109" /locus_tag="L40862" /codon_start=1 /transl_table=11 /product="prophage ps1 protein 09" /protein_id="NP_266189.1" /db_xref="GI:15672015" /db_xref="GeneID:1113633" /translation="MTNIIRACPYVAGIDSVGMRSLKGYHTELTDKQIEKIDPLNANT GTVDYSFKVRKYKHGVRFEGEKEGGEISLFDEVAK" gene complement(41141..41422) /gene="ps110" /locus_tag="L41144" /db_xref="GeneID:1113634" CDS complement(41141..41422) /gene="ps110" /locus_tag="L41144" /codon_start=1 /transl_table=11 /product="prophage ps1 protein 10" /protein_id="NP_266190.1" /db_xref="GI:15672016" /db_xref="GeneID:1113634" /translation="MNDDTLTNLVARGLVDEVIHLFNKYLGTQLKIRNEKRVLPYISK KRVMEDLDISDGTLDNWEKHGLNRYKPRYKTSLIYYLIDDICKFIVIDT" gene complement(41419..41670) /gene="ps111" /locus_tag="L41422" /db_xref="GeneID:1113635" CDS complement(41419..41670) /gene="ps111" /locus_tag="L41422" /note="PBSX(XRE) family of transcription regulators" /codon_start=1 /transl_table=11 /product="prophage ps1 protein 11" /protein_id="NP_266191.1" /db_xref="GI:15672017" /db_xref="GeneID:1113635" /translation="MKFTSRYTLKDLRELNHLTLKQVARKVKLNRERIAELEQDSSFI TIDEMFRFSKFYGLSIKYIFIGEQVDFDRKLNEYLGGTP" gene complement(41667..42188) /gene="ps112" /locus_tag="L41670" /db_xref="GeneID:1113636" CDS complement(41667..42188) /gene="ps112" /locus_tag="L41670" /note="similar to a putative DNA polymerase of Neurospora crassa mitochondrion plasmid maranhar" /codon_start=1 /transl_table=11 /product="prophage ps1 protein 12" /protein_id="NP_266192.1" /db_xref="GI:15672018" /db_xref="GeneID:1113636" /translation="MKFKTFNLRAYHRKDETILSFVLKGGRIPTSRILYIKKGNPFKM KITHEIAEKYRIKQEIKQTRKKTDSPNGLYPLIEAIEKDVSQLLNKQDKDDWEGWKRV FAYEYLYDVAFNRGVRQERQRRKTQHKALTAFDIISSEDVSELSNELGISEDKLTYAV MEVISKRKNGGMA" gene complement(42192..42386) /gene="ps113" /locus_tag="L42195" /db_xref="GeneID:1113637" CDS complement(42192..42386) /gene="ps113" /locus_tag="L42195" /codon_start=1 /transl_table=11 /product="prophage ps1 protein 13" /protein_id="NP_266193.1" /db_xref="GI:15672019" /db_xref="GeneID:1113637" /translation="MNTPINKETYILDDSIAFELMDLLKAKARHFIQLNEYVYRLFDG QSVVTFTTLENNIQVEMVKG" gene complement(42462..43202) /gene="ps114" /locus_tag="L42465" /db_xref="GeneID:1113638" CDS complement(42462..43202) /gene="ps114" /locus_tag="L42465" /note="similar to Rha protein of Escherichia coli phage phi-80" /codon_start=1 /transl_table=11 /product="prophage ps1 protein 14" /protein_id="NP_266194.1" /db_xref="GI:15672020" /db_xref="GeneID:1113638" /translation="MNEITVSLDVIIKNKNVIVSSLSVAKAFDRQHSHILRSIEDIKR DWDSLIQSKNGLNRNIIPLKSQGNKQVIFTDYFKESEYIAENGRLVKFFEMNRNGFML LANSFNGKRILPIKLAFIERFDELEHITLEQAKETENRKNLNQAIKESPHFKPFYYSR FSDFLCQLITHNKYKTVKKLREDKGYYGKQFSKIPLKSLLDSEEDLKRLQKLENSIIA WLEIDYSFREIKAFLTKEKAQPLPTKKA" gene complement(43231..43407) /locus_tag="L200002" /db_xref="GeneID:1113639" CDS complement(43231..43407) /locus_tag="L200002" /codon_start=1 /transl_table=11 /product="putative bacteriophage bIL310 repressor" /protein_id="NP_835285.1" /db_xref="GI:30023970" /db_xref="GeneID:1113639" /translation="MKKALRRVQADKLMTKKDLAKVLGVTEKTAQSLTRDNEPQEVKN KVFNAVVSVIAENY" gene 43689..44075 /gene="ps115" /locus_tag="L43680" /db_xref="GeneID:1113640" CDS 43689..44075 /gene="ps115" /locus_tag="L43680" /note="transcription regulator; similar to Rad protein of Lactobacillus bacteriophage phi adh" /codon_start=1 /transl_table=11 /product="prophage ps1 protein 15" /protein_id="NP_266195.1" /db_xref="GI:15672021" /db_xref="GeneID:1113640" /translation="MTIFERVQELSRKQGKTLQKVANDLGFGDNYLYTLKKQKPKADN LEKLADYFHVSVDYLLGRAEAKPVNEPIDLAEVANSDDDAIFDSILSAGGRPLTEKDK AMIKLVFADRWEELQQKAKDLKDSEK" gene 44085..44639 /gene="ps116" /locus_tag="L44085" /db_xref="GeneID:1113641" CDS 44085..44639 /gene="ps116" /locus_tag="L44085" /codon_start=1 /transl_table=11 /product="prophage ps1 protein 16" /protein_id="NP_266196.1" /db_xref="GI:15672022" /db_xref="GeneID:1113641" /translation="MNQEELTALIVIKIENLGIDYRTFEYDNQRAWIDTRLCIGGYNP NLATPFDHAHEYMHAYYKDDRRLGECDTLSPTEKRANKEAILMLWDWFIQNGGNFDDI TQFCEITGCHYDATKRLITSMCCDTTTKNFRECAIDYVSHFDIITRDTLNIYNFLDFY GYHHNAYDEARALLYELCWFELVG" gene 44750..44980 /gene="ps117" /locus_tag="L44747" /db_xref="GeneID:1113642" CDS 44750..44980 /gene="ps117" /locus_tag="L44747" /codon_start=1 /transl_table=11 /product="prophage ps1 protein 17" /protein_id="NP_266197.1" /db_xref="GI:15672023" /db_xref="GeneID:1113642" /translation="MKNIVDELKKEQKINLLLFVVLNLLFIFIVKTNFVYMIALNIAL ITNIFIKHINKFAKIALYTISFILFVLSIVAF" gene 45053..45247 /gene="ps118" /locus_tag="L45035" /db_xref="GeneID:1113643" CDS 45053..45247 /gene="ps118" /locus_tag="L45035" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266198.1" /db_xref="GI:15672024" /db_xref="GeneID:1113643" /translation="MKLSDYLKSIDNLDEKMEKAVIIAGYEKMFGEHYRLPQEQFADL MELPLPKLRRVIHEMKKAID" gene 45399..45641 /gene="ps119" /locus_tag="L45351" /db_xref="GeneID:1113644" CDS 45399..45641 /gene="ps119" /locus_tag="L45351" /codon_start=1 /transl_table=11 /product="prophage ps1 protein 19" /protein_id="NP_266199.1" /db_xref="GI:15672025" /db_xref="GeneID:1113644" /translation="MDNITNESDNLIQIFSHNPLALISCIILGIGLLFTFASRQFILV RVLLGNVSFIKQRILGVIFGIVGALLLLFATGNLNL" gene 45777..46001 /gene="ps120" /locus_tag="L45702" /db_xref="GeneID:1113645" CDS 45777..46001 /gene="ps120" /locus_tag="L45702" /codon_start=1 /transl_table=11 /product="prophage ps1 protein 20" /protein_id="NP_266200.1" /db_xref="GI:15672026" /db_xref="GeneID:1113645" /translation="MIITMITKKEIKDRFERTSGGILSGVEIITDKNTGVQYMVVNKD SDGCGITPLIDKNGKPLLAKPDSESHFDLY" gene 46648..46794 /locus_tag="L200003" /db_xref="GeneID:1113646" CDS 46648..46794 /locus_tag="L200003" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_835286.1" /db_xref="GI:30023971" /db_xref="GeneID:1113646" /translation="MNGILSVGQGFGGTYAMGNIGDFLDITNGRVISKKYFIKHYYIK IDDE" gene 47370..47585 /gene="ps121" /locus_tag="L47364" /db_xref="GeneID:1113647" CDS 47370..47585 /gene="ps121" /locus_tag="L47364" /codon_start=1 /transl_table=11 /product="prophage ps1 protein 21" /protein_id="NP_266201.1" /db_xref="GI:15672027" /db_xref="GeneID:1113647" /translation="MGLSHNKMIKSKVGLTDFTTDYGLTQKRVALTHLFLISMVSEDS ALLRSPKSEESTLLCSRLSEKRESSYL" gene 47702..47866 /locus_tag="L200004" /db_xref="GeneID:1113648" CDS 47702..47866 /locus_tag="L200004" /codon_start=1 /transl_table=11 /product="bacteriophage bIL310 Orf3" /protein_id="NP_835287.1" /db_xref="GI:30023972" /db_xref="GeneID:1113648" /translation="MKKDDVIKLSDGQIATIVTGDESTTLQNCYIVRLENEDIRVVDR KTLTLAESLK" gene 47988..48293 /gene="ps122" /locus_tag="L47979" /db_xref="GeneID:1113649" CDS 47988..48293 /gene="ps122" /locus_tag="L47979" /note="similar to lactococcin A immunity protein" /codon_start=1 /transl_table=11 /product="prophage ps1 protein 22" /protein_id="NP_266202.1" /db_xref="GI:15672028" /db_xref="GeneID:1113649" /translation="MADNDKTSQIKLDFLNTLYNLILSEDIKEEERRVLTKAKNLVEK GEYIPNVIRRMQTNFTLDAINSNLSPSVSEFYSTLPKILAEILPAFPGTGSSLGIPL" gene 48543..49727 /gene="ps123" /locus_tag="L48477" /db_xref="GeneID:1113650" CDS 48543..49727 /gene="ps123" /locus_tag="L48477" /note="prophage ps1 protein 23" /codon_start=1 /transl_table=11 /product="integrase" /protein_id="NP_266203.1" /db_xref="GI:15672029" /db_xref="GeneID:1113650" /translation="MNIKEYTKKDGTKVYRANVYLGVDSLTGKQVRKVITAKSEKMCN TKISRAINEFEKNGQTVRKVSVDDFKDIAMLWFDSYKLGVKPRTVQIMQTRLNNYVLP ALGEYRIDKVNSIILQQIVNQWMINASQPLNGAYHRPKGKGKDFKIYFNIVERIFKHA LSLGLVKDNPCVNVIVPKVRLESTEKKVKHLTAEQLKIFFEYIGALPKEKYTNELMTG LCRLLVASGLRIGEAVALSWSDIDFKTGSVSVSKTTLRAVIQSTPKTDKSNRIVLIDS KAVEVLKHWELFQAKYFMSIGKGKQELVFPNRTGGVLDYQTMRPFLIKWLRACQLPQV GFHGFRHSHASLLLNADVPYKEIQERLGHASIKMTMDTYSHLESDNKIKAVERFESIV NF" gene 50180..50629 /gene="yafE" /locus_tag="L50174" /db_xref="GeneID:1113651" CDS 50180..50629 /gene="yafE" /locus_tag="L50174" /note="paralogous to yfhA" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266204.1" /db_xref="GI:15672030" /db_xref="GeneID:1113651" /translation="MLIRNYESKDLDEVINLFKNTIFEVNISDYTLEQVKAWVDVDTE LFDDNLAKTYARVISNHEQLVGFGNIDDKGYIDLFYVSADYQRQGVGQKLLNDLEKSS NYTSFMVNSSITAKPFFEKMGYKETKKNCVHLRGQNFVNFTLKKVVE" gene 50706..50948 /gene="yafF" /locus_tag="L50682" /db_xref="GeneID:1113652" CDS 50706..50948 /gene="yafF" /locus_tag="L50682" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266205.1" /db_xref="GI:15672031" /db_xref="GeneID:1113652" /translation="MTTKTVNKHLFVWLGSFLFGGFGVDRFMRGQIGMGICKLLFNWA TLGIWSFVDWIVALVKAYSTYNDTEDITFINGGYSR" gene complement(51029..52411) /gene="yafB" /locus_tag="L1004" /db_xref="GeneID:1113653" CDS complement(51029..52411) /gene="yafB" /locus_tag="L1004" /note="transport and binding protein, anions; similar to several sulfate transporters" /codon_start=1 /transl_table=11 /product="sulfate transporter" /protein_id="NP_266206.1" /db_xref="GI:15672032" /db_xref="GeneID:1113653" /translation="MAAILISLIGKYGMNGIFIATFMAGIFLLLAGIFRLGNLISLIP SPVITGFTSGIAIIIASGQIKNFFGIEHFTGSFFDLMKFISGLHIDYPSTIIGLLTIL LMIFYPKSWGKKFPASLLAILLSTLAVLALKLDIPLVGKIPTTLIPQAHLRLTELNPQ DMKTLLIPAISITVLGMTESLLCGASAGRATNHPMDNNQELVAQGIGNIFIPFFGGIP ATAAIARTSVAIKAGAQTRLTGIIHALILLLSMFLFAPFMTHIPLSALAGVLIMTAVR MNEWEAIRFLFKNKLKSGIIEFFVTMIITVIFDLSTAILAGIVVGFLLFIVKISQIEI NSSQIEPERISQNHHEVFTDWTVIYISGPLFFLNSSKLKQAIDELPANTNAVLSLRGV PMIDVTSIKLLIDIYSIFHKEERQIVFASMNPKLKESFKRTGLISMVGEEAIYPSVNE FLLDLVDKNK" gene 52656..53027 /gene="yafG" /locus_tag="L52494" /db_xref="GeneID:1113654" CDS 52656..53027 /gene="yafG" /locus_tag="L52494" /note="transposon related function" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266207.1" /db_xref="GI:15672033" /db_xref="GeneID:1113654" /translation="MELKENAVQCYLTTDLTYEAVARKFEITNFTLLASWVNHFKIYG EVPISKKRGRRKKLESIASSMTQNPNDSQRIKELEQELRYAQIEVAYLKGLRRLEKNA LMNKNQDSSTVSVKPSNSKKS" gene 53161..53844 /locus_tag="L0466" /db_xref="GeneID:1113655" CDS 53161..53844 /locus_tag="L0466" /experiment="experimental evidence, no additional details recorded" /note="evidence experimental PMID:1328163; transposon related function; IS3/IS150/IS904 family transposase" /codon_start=1 /transl_table=11 /product="IS1077A transposase" /protein_id="NP_266208.1" /db_xref="GI:15672034" /db_xref="GeneID:1113655" /translation="MSELLKQRGYHVNHKKVQRLMKKLGLRVTSYWHKLRNHNSYKGK VGTVAKNKLHRRFRTSIPHQKITTDTTEFKYYEDGIQKKCYLNPYIDLFNSEVISYHI SKHPSYQSIDIALNQALAVTSDCPYRRTFHSDQGWGYQMRDYVSKLKSHRIFQSMSRK GKCHDNSVMENFFGLLKQEIYYGHIFSSFEELEQVIVIWIRYYNTKRIKQKLNWMSPI QFRLNYQNN" gene complement(53900..54661) /gene="tra904A" /locus_tag="L0457" /db_xref="GeneID:1113656" CDS complement(53900..54661) /gene="tra904A" /locus_tag="L0457" /experiment="experimental evidence, no additional details recorded" /note="evidence experimental PMID:1328163; transposon related function; IS3/IS150/IS904 family transposase" /codon_start=1 /transl_table=11 /product="transposase of IS904A" /protein_id="NP_266209.1" /db_xref="GI:15672035" /db_xref="GeneID:1113656" /translation="MHRRPSKQQVEREILSEKIKAVFHEHKGRYGAVRITKVLHNTGI MTNTKRVGKLMHLMGLYAKGSRYKYKHYNRKGASLSRPNLINQIFKATAPNKVWLGDM TYIPTKEGTLYLAVNIDVFSRKIVGWSMSSRMQDKLVRDCFLQACGKEHPQPGLIVHT DQGSQYTSSRYQSTLRQVSAQSSMSRKGNPYDNAMMESFYKTLKRELINDAHFETRAE ATQEIFKYIETYYNTKRMHSGLDYKSPKDFEKYNS" gene complement(54757..55047) /gene="yafI" /locus_tag="L54760" /db_xref="GeneID:1113657" CDS complement(54757..55047) /gene="yafI" /locus_tag="L54760" /note="transposon related function" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266210.1" /db_xref="GI:15672036" /db_xref="GeneID:1113657" /translation="MARRKFDKQFKNSAVKLILEEGYSVKEVSQELEVHANSLYRWVQ EVEEYGESAFPGNGTALADAQHKIKLLEKENRYLKEELELLKKFRVFLKRSK" gene complement(55126..55389) /gene="yafJ" /locus_tag="L55129" /db_xref="GeneID:1113658" CDS complement(55126..55389) /gene="yafJ" /locus_tag="L55129" /note="similar to hypothetical protein YvdB from Bacillus subtilis" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266211.1" /db_xref="GI:15672037" /db_xref="GeneID:1113658" /translation="MIKQFLCIINSEFKDYNRRKFLQDLMAGITVAAVALPLALAFGV SSGTTAAAGLITAIVAGIIISSLSGAFYQISGPTGAIDVHPKS" gene 55599..56120 /gene="yafC" /locus_tag="L1005" /db_xref="GeneID:1113659" CDS 55599..56120 /gene="yafC" /locus_tag="L1005" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266212.1" /db_xref="GI:15672038" /db_xref="GeneID:1113659" /translation="MIIKTINLENYNEVTELIRESFSQSEHGYGNEAELVDKIRNEEG YIKDLEIVAFEDGKIVGHGLLSEVEIVSDSQKFKGLVLAPLDVLTTYQGKGIGAAVLL ELEKRAKILDYPFISILGHETYYPKFGYVPASQYQIKAPFEVPDKNFMIKELTDGGLE GKSGVIHYSEAFN" gene 56361..56433 /locus_tag="L200088" /db_xref="GeneID:1113545" tRNA 56361..56433 /locus_tag="L200088" /product="tRNA-Lys" /db_xref="GeneID:1113545" gene 56584..57759 /gene="araT" /locus_tag="L56488" /db_xref="GeneID:1113660" CDS 56584..57759 /gene="araT" /locus_tag="L56488" /function="energy metabolism; catabolism of aromatic amino acids" /experiment="experimental evidence, no additional details recorded" /note="catalyzes the transamination of the aromatic amino acid forming a ketoacid; first step in aromatic amino acid degradation in lactococci" /codon_start=1 /transl_table=11 /product="aromatic amino acid aminotransferase" /protein_id="NP_266213.1" /db_xref="GI:15672039" /db_xref="GeneID:1113660" /translation="MDLLKKFNPNLDKIEISLIRQFDQQVSSIPDVIKLTLGEPDFYT PEHVKQAGIVAIENNQSHYTGMAGLLELRQAASEFMNKKYGLSYAAEDEILVTVGVTE AISSVLLSILVAGDEVLIPAPAYPGYEPLITLAGGSLVEIDTRANDFVLTPEMLEQAI VEREGKVKAVILNYPANPTGVTYNRGQIKALAEVLKKHEVFVIADEVYSELNYTDQPH VSIAEYAPEQTIVLNGLSKSHAMTGWRIGLIFAARELVAQIIKTHQYLVTSASTQSQF AAIEALKNGAYDALPMKKEYLKRRDYIIEKMSDLGFKIIEPDGAFYIFAKIPADLEQD SFKFAVDFAKENAVAIIPGIAFGQYGEGFVRLSYAASMDMIEQAMARLTDYVTKKRG" gene 57858..58613 /gene="recO" /locus_tag="L1006" /db_xref="GeneID:1113661" CDS 57858..58613 /gene="recO" /locus_tag="L1006" /note="involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA" /codon_start=1 /transl_table=11 /product="DNA repair protein RecO" /protein_id="NP_266214.1" /db_xref="GI:15672040" /db_xref="GeneID:1113661" /translation="MRDAETQGLVLYSRNYKEKDKLVKIFTESFGKRMFFVKNFGKSP YASSLQAFTDGKLTATINDGGFSFIEDVSEVVVYKNISSDIFINAHASYIISLADAAI SDNQYDPGLYGFLKRSLELLDQGFDMEVVTNIFELQVLHRFGISLNFSECAFCHKTVG PFDFSYKFSGCLCPQHFDEDLRRSHLDPNVIYLVNLFQEISLDELKKISIKADMKLKI RQFIDGLYDEYVGIHLKSKKFLDGMSGWADIMK" gene complement(58971..60389) /gene="pdhD" /locus_tag="L0036" /db_xref="GeneID:1113662" CDS complement(58971..60389) /gene="pdhD" /locus_tag="L0036" /EC_number="1.8.1.4" /note="E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide" /codon_start=1 /transl_table=11 /product="dihydrolipoamide dehydrogenase" /protein_id="NP_266215.1" /db_xref="GI:15672041" /db_xref="GeneID:1113662" /translation="MVVGAQATEVDLVVIGSGPGGYVAAIRAAELGKKVTIIEKDNVG GVCLNIGCIPSKALINIGHHYQESLEEEKGENPFGLSVGNVKLNWESAQKWKQDKVVN QLTGGVKMLLKKHKVDVIQGTAEFIDNNTINVEQEDGFQLLQFNDVIISTGSRPIEIP SFPFGGRIIDSTGALSLPEVPKHLIIVGGGVIGSELGGAYRMLGSKITIVEGLDHILN GFDKEMSDIIANRVKSAGSEIFTSAMAKSATQTDKDVTLTFEVDGKEQTVTGDYLLVS VGRRPNTDLIGLNNTDVKLTDRGLIEVDDSYATNVPHIYAIGDVVPGPMLAHKASFQA KVAAAAIAGAEDDVDLHVALPAVAYTTTELATVGETPESVKDRKDVKISKFPFAANGR AISMNDTTGFLRLITETKEGALIGAQIVGPGASDLISGLSLAIENGLTSKDISLTIQP HPTLGEAIMDTAELADGLPIHV" gene complement(60583..62181) /gene="pdhC" /locus_tag="L0035" /db_xref="GeneID:1113663" CDS complement(60583..62181) /gene="pdhC" /locus_tag="L0035" /EC_number="2.3.1.12" /note="pyruvate dehydrogenase" /codon_start=1 /transl_table=11 /product="dihydrolipoamide acetyltransferase component of PDH complex" /protein_id="NP_266216.1" /db_xref="GI:15672042" /db_xref="GeneID:1113663" /translation="MTEIFKMPDIGEGMHEGDIANWLVKVGDVVKEDDPIAEVQNDKL MQEILSPYSGTVTKLFVEAGTTVEVDSPLVEFDGDGSGSSAAAPTPQETAGSDTATTD APSGEAQIFTMPDIGEGMHEGDIANWLVKVGDEIKEDDPVAEVQNDKLMQEILSPYSG KVTKLFVEAGTTVEVGAPLIEYNGNGAAPAAASPAPVAEAPKAASPASPANAPLTKTT STGHILAMPSVRHYARKAGIDLSQVPATGRHGHTTLADVKAFESGSVAPIAQTTPEAA PAPKADKPAAPVAEKAPSVKAGAGDRREAMNPTRKVVSKVMTAQHTHIPPVTNFDQVE VSKLVKHRAVFKEIAAKQDIKLTYLAYVAKALATTAHKFPDINASVDYEKQEIVYHEH VNLGIAVNAPTGLYVPVIHEAETKSILEIAKEIAELATATREGTLKPQQMQGSTITIS NIGSARGSWFTPIINGSDVVILGLGSIVKEPIVNGEGEIVVGQNMKLSMTYDHRLIDG MLGQTSLNYLKSLLADPEFMLMEI" gene complement(62174..63154) /gene="pdhB" /locus_tag="L0034" /db_xref="GeneID:1113664" CDS complement(62174..63154) /gene="pdhB" /locus_tag="L0034" /EC_number="1.2.4.1" /note="pyruvate dehydrogenase" /codon_start=1 /transl_table=11 /product="PDH E1 component beta subunit" /protein_id="NP_266217.1" /db_xref="GI:15672043" /db_xref="GeneID:1113664" /translation="MAVKTYIAAITEALDLALEKDKDALIFGEDVGQNGGVFRATDGL QAKYGEERVFNTPLAESGIGGMAIGLATQGFHPIMEIQFGTFIFEVFDSIAGQMSRTR YRFNNTRSNNIVVRTPYGIGTKTPEMHADSIEGLFSQIPGIRVVMPSNPADAKGLLLA SIENNDPVIFLENLHLYRSLKGEVPEGYYTTPLDTAAVAKEGSDVSIIAYGGTVPLAL KAAEQLEKDGIKAEVLDLRTVAPLDIESIGKTVEKTGRVVVVQEAQRTAGIAANVMAE ISERFVLNLKAPIGRVSGPDSIFPFAQAENDWAVKAEDIVNKVKEVVDYD" gene complement(63157..64281) /gene="pdhA" /locus_tag="L0033" /db_xref="GeneID:1113665" CDS complement(63157..64281) /gene="pdhA" /locus_tag="L0033" /EC_number="1.2.4.1" /note="pyruvate dehydrogenase" /codon_start=1 /transl_table=11 /product="PDH E1 component alpha subunit" /protein_id="NP_266218.1" /db_xref="GI:15672044" /db_xref="GeneID:1113665" /translation="MSNSEQILDFKAQLELQDTTFPMLQILNEEGKIVDEDGLKRAGL SDEKLVELFKSMLFARQVDIRSMKLAKQGRMGFFGPHAGQEASQMASSFAFTDEDWLF PGYRDLPQIYAKGWPIWKGLLWSRGHQLGNEYTTDDGKPVNSWFPQIIIGAQYVEAAG VALGLKKRKKDAVAFVYTGDGGSSQGDTYEGINFAGAYKAPLVAFIQNNGYAISTPRS LQSAAPHLAAKGWAAGAPSIVVDGMDAIAMYLASKEARAWAVAGNGPVVIEAITNRLE PHSTAGDDPLRYRTKEDIEAWWKKEPLVRMRNFLTEKGLWDTEKEEAYIAELDAGIDA DIKKANNVEKQKISSFIKNTLEVPSQAMAEQIAKFESEGK" gene complement(64370..65371) /gene="lplL" /locus_tag="L64373" /db_xref="GeneID:1113666" CDS complement(64370..65371) /gene="lplL" /locus_tag="L64373" /codon_start=1 /transl_table=11 /product="lipoate-protein ligase" /protein_id="NP_266219.1" /db_xref="GI:15672045" /db_xref="GeneID:1113666" /translation="MQFINYLGQDAYTNIAMDSWLLYHLKPTEPVFALWQNKRAVIVG RNQNTFAEVNQDYIDSHDVQVVRRVSGGGAVYHDEGNICFTFFVPVENSGSVNFKKFV QPMYEALHAVGIKAEITGRNDLEVEGKKISGNAQRYAGGYLMHHGTLLWDTDVEAMIR SLNVSDEKFVSKAAKSVRARVGNIKDFAPEDLTLDSFIDALKYYLTDEGKDGELVLTD DQLSSIKKIRDEQFATWDWNYGESPKFSFQNHAKFTGGAIDIQVNVENGKITEINFQG DFLGVRDWRDIKEQFIGLEFEPSAILEVLETNKEGQYFGTIQNTELSEMFKADYRTD" gene complement(65571..66416) /gene="yagA" /locus_tag="L1007" /db_xref="GeneID:1113667" CDS complement(65571..66416) /gene="yagA" /locus_tag="L1007" /note="similar to glycerophosphoryl diester phosphodiesterases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266220.1" /db_xref="GI:15672046" /db_xref="GeneID:1113667" /translation="MSGFTKIVFKLHNFLDRNKIKNNLKFKPSLTSKTLVFAHRGSKS NCPENTLAAFHEAVRVHADGIELDVHLSLDNELIVIHDEKIDRTTNGKGLVKNMNAVD LKKFDAGSWFNPKFTDEKIPTLSEVLKLLTDLSFTGYLNIEIKTDKFDYPGIEKKLSD LMKETKWPFSYIYSSFNFDSLKKIHTFDSKAEVNYLTKNLLTLKSHYKGSSTDFISGI HPRRTYAFKHPLLLKSSKRPLRLWTVNQETEIRQAFQQHVAGIITDFPERALEIRREI QDQSK" gene complement(66497..67147) /gene="yagB" /locus_tag="L1008" /db_xref="GeneID:1113668" CDS complement(66497..67147) /gene="yagB" /locus_tag="L1008" /note="exists in AT rich gram positives and in archae" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266221.1" /db_xref="GI:15672047" /db_xref="GeneID:1113668" /translation="MIDLKKIKRFAQEIHDKNNDGHGFDHIERVVALARKILLTEPSA NQELVLATCYLHDTYDEKLTDDVPKQKVKVAQFLNELKIDKKLIDELFMIIDNMSFSS NLIERKTLSLNGQIVQDADRLDAMGAWGIVRTLEYGWAKNRVFYDPNLPPLDYNSKED YHSQKNNSTLNHFYEKLFLLKDLLNTTEGKRLGEKRDKIMHLFVSQIEEEYKETHL" gene complement(67264..68289) /gene="trpS" /locus_tag="L0358" /db_xref="GeneID:1113669" CDS complement(67264..68289) /gene="trpS" /locus_tag="L0358" /EC_number="6.1.1.2" /note="catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA" /codon_start=1 /transl_table=11 /product="tryptophanyl-tRNA synthetase II" /protein_id="NP_266222.1" /db_xref="GI:15672048" /db_xref="GeneID:1113669" /translation="MTKPTILTGDRPTGKLHIGHYVGSLQNRVKMQNEDKYNMFVFLA DQQALTDHAKEPELIRQSVGDVALDYLAAGLDPEKSTIFIQSQIPELAELSMYYMNLV SLARLERNPTVKTEIAQKAFGESIPAGFLVYPVSQAADITAFKATHVPVGNDQKPMIE QTREIVRSFNNAYHTDVLVEPEGIYPENEAAGRLPGLDGNAKMSKSLGNGIFLADDMD TLKKKVMSMYTDPDHIKVEDPGKIEGNMVFHYLDVFGKAEDAEQISEMKAQYQAGGLG DVKTKRFLLDVLDRELSPIRERRIEFAQNMDYVYDMLKAGSLKAQAVASQTLDEVKSA MGINYFK" gene 68791..69228 /gene="osmC" /locus_tag="L68759" /db_xref="GeneID:1113670" CDS 68791..69228 /gene="osmC" /locus_tag="L68759" /note="adaptations and atypical conditions; similar to osmotically inducible protein OsmC of Escherichia coli" /codon_start=1 /transl_table=11 /product="osmotically inducible protein" /protein_id="NP_266223.1" /db_xref="GI:15672049" /db_xref="GeneID:1113670" /translation="MKNISTASAHWEDTLENGFGTISAESSQIFTETPYNFKARSESQ AHITTPEELLGAAHAACFSMAFSMVLGQKGLVATSIDTTADVTFEATADGPAITKIKL TNRSVVPGLSEADFQEIAKVVKESCPVSKALSGVDIELEATLG" gene 69389..70702 /gene="yagE" /locus_tag="L69353" /db_xref="GeneID:1113671" CDS 69389..70702 /gene="yagE" /locus_tag="L69353" /note="transport and binding protein; amino acids, peptides and amines; similar to many amino acid permeases" /codon_start=1 /transl_table=11 /product="amino acid permease" /protein_id="NP_266224.1" /db_xref="GI:15672050" /db_xref="GeneID:1113671" /translation="MKENKLLSPAAIFLLGVNSIIGSGIFLLSGKIYEDAGIWSLLAI LCAGLSIFVIAFAYANMSKIYSKNGGAFVYAKETFGRFPGFIVGMVTWLLGTVTLATE VSVLLTAMKMILPNLNSRLIGIIIILALGIISYFGSSIIAGLDNLTSFVKIVLVLVFI FTCLWLVRGLNFSSPNLLTASSANLGGFKGFLSAYGTVFFFFTGFSFLPVNAEKMKNP AKNLPKMMSLVMLTCLAVYLIIQTITIGALGPELTKTLVPAATAFSKIVGSIGIPLFV VGICFSIFGVIVATTFNTPTILASLAQAHEDVPMFVSKNNRFGTPTWAIILTTVCGIA LFLSGNYVFLSGLTVFMSFVQYLSTGLANIKKKFLLIGIGSVLFSLVLLTSFTLSVLI LGLGILILLVMIYFVVKLDDDEREKWLKEHQEKSKGADVNTVKRL" gene 70762..71112 /gene="yahC" /locus_tag="L70747" /db_xref="GeneID:1113672" CDS 70762..71112 /gene="yahC" /locus_tag="L70747" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266225.1" /db_xref="GI:15672051" /db_xref="GeneID:1113672" /translation="MTKKEYTFWLLSSIFLIIGLILQFIPSHSIQNASFTALIIGLVL VFFIKDKNESRKPLPEKFYQKKVFWAWIFIPLFVILFIYSIFLKKESPYNFMMIILVV DMIIFNYFGTKYKW" gene complement(71171..72166) /gene="plsX" /locus_tag="L71174" /db_xref="GeneID:1113673" CDS complement(71171..72166) /gene="plsX" /locus_tag="L71174" /function="fatty acid and phospholipid metabolism" /note="involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY" /codon_start=1 /transl_table=11 /product="putative glycerol-3-phosphate acyltransferase PlsX" /protein_id="NP_266226.1" /db_xref="GI:15672052" /db_xref="GeneID:1113673" /translation="MKIAIDAMGGDFAPENIVKGVNLAKKELSDVTFQLYGDGAKIRQ FLDDETNIEIVETTEIIDFHDDPVAAIKSKKDSSLVRAVTAVKKGEADAVLSAGSTGA LLTAGLLLVKRIKQVSRPALMSTLPTADGRGFDMLDLGANTENTAHHLVDFAILGSYY AENVRGINKPRVALISNGAEESKGSPTVKEAHEILSAMSEINFIGNIESRDLLSGGAD VVVTDGFTGNAILKAIEGTATVLMKEIKSAIMAGSVTTKIGGALIKKPLSVLKDLMST DGAGGAAFVGLKAPVVKAHGNSSELAIASALKQIHKMLESDVSGKLVEHFEKMDK" gene complement(72269..73081) /gene="yahA" /locus_tag="L1009" /db_xref="GeneID:1113674" CDS complement(72269..73081) /gene="yahA" /locus_tag="L1009" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266227.1" /db_xref="GI:15672053" /db_xref="GeneID:1113674" /translation="MNQNLKLFATDMDGTFLHNDHSYNHKKLAEVIKKIQDRNLLFAA SSGRSLLGLIEVFSEYKDQMAFVAENGGVVAYKGEILFAKDLTVAQTQELIDDLQEMP FSPKNDYLISGLKGAYYPEGISKEYLTHAKLYYPNCQLYHRLDEIDDKLLKVTTNFPE DHVRDCEQWITDRLSFVRATTTGFTSIDIVPNGISKASGLVHLLAHFNWLPENLAVFG DQMNDLEMFEYAGSSFAVSNAAPEILELADKVILSNDEDAVLVEIENILNEE" gene complement(73207..74844) /gene="yahG" /locus_tag="L73210" /db_xref="GeneID:1113675" CDS complement(73207..74844) /gene="yahG" /locus_tag="L73210" /note="transport and binding protein; contains two ATP binding domains" /codon_start=1 /transl_table=11 /product="ABC transporter ATP binding protein" /protein_id="NP_266228.1" /db_xref="GI:15672054" /db_xref="GeneID:1113675" /translation="MLTVSDISLQFSDRKLFDEVNIKFTPGNCYGLIGANGAGKSTFL KILDGEIQPTTGHISMGPNERMSVLRQNHYDYEDQTPLDVVMMGNEKLFAINQEKNAI YMNPDATDDDFMKAAELEAEFGEMGGYEAEADAARLLQNLGIKAEQHTDLMANLTSGE HVKVLLAKALFGKPDVLLLDEPTNGLDIQAIAWLEEFLINFENTVIVVSHDRHFLNNV CTYMADLDYGKIKLYPGNYDFWKESSELALRLQGDQNRKAEEKIAELKEFIARFSANA SKSKQATSRKKMLDKIEVEEFVPSSRKYPFVGFEQEREIGNDLLRVENLSVAIEGEMI IENTSFILNPGDKTVFIGQNDIQQTTLLRALMDDVEDNWTVTGDIKWGVTSSRSYLPK DNTKDFDTSDSILDWLRQFVLTKEEDDNTYLRGFLGRMLFKGEESLKAVNVLSGGEKV RVMLSKMMLQRANVLVLDDPTNHLDLESISALNDGLKSFKGSILFASHDHEFINTIAN HIVVLGKSGVIDRIGETYDDFLDNAEVQEKVKALWAD" gene complement(75972..77252) /gene="cysD" /locus_tag="L75975" /db_xref="GeneID:1113676" CDS complement(75972..77252) /gene="cysD" /locus_tag="L75975" /function="transforms o-acetylhomoserine into homocysteine" /codon_start=1 /transl_table=11 /product="O-acetylhomoserine sulfhydrylase" /protein_id="NP_266229.1" /db_xref="GI:15672055" /db_xref="GeneID:1113676" /translation="MTNHNYKFDTLQVHAGQVPDPVTGSRAVPLYQTTSFVFNNSDHA EARFALQDPGAIYSRLGNPTNDVFEARIAALEGGSAALGVGSGSAAITYAILNIATVG DNIVSASTLYGGTYHLFSGTLPKYGITTKFVNPDDPKNFEEAIDEKTKAIYYETLGNP GNNVIDYDAIGQIAKKHGIPVIVDATFTTPVTFKPFEHGANVIVHSATKFIGGHGTSI GGVIVDGGNFDWANGNFPDFTQADESYNGIKFAELGEIAFVTRVRAILLRDTGAALSP FHSWLFLQGLETLSLRVERHISNTKKIVEFLDNHPKVELVNHPLLESNSYHALYQKYY PKDAGSIFTFELKDKDEKKARDLIDHLEIFSLLANVGDTKSLAIHPASTTHQQLNAEE LASAGISKGTIRLSVGIEDVTDLIADLEQALEKI" gene complement(77479..78312) /gene="yahI" /locus_tag="L77482" /db_xref="GeneID:1113677" CDS complement(77479..78312) /gene="yahI" /locus_tag="L77482" /note="aerobic energy metabolism" /codon_start=1 /transl_table=11 /product="short-chain type dehydrogenase" /protein_id="NP_266230.1" /db_xref="GI:15672056" /db_xref="GeneID:1113677" /translation="MTQKIVAITGASNGMGFEAAELFAKRGWKVYAGARRVEKIPQYE NNIKALKLDVTSSESNQAFVKKILDEAGHIDVLINNAGYGEYGPAEEIPMDKIRNQFE TNFFGAVELTQLVLPTMRAQNYGRIVNISSIGGDVYMPLGAYYHATKAALQQWSDVLD LEVAQFGIRSVCVQPGGTQSSWGNIALENSKKNMSSNSAYQPLVNSVASGLDRFMKNS AKASDLAEVFYKAATEIKPSLRYLHSFGDKFMVNVARKHPKIFRKALLITMRYFEKHN Q" gene 78713..79180 /gene="yahB" /locus_tag="L1010" /db_xref="GeneID:1113678" CDS 78713..79180 /gene="yahB" /locus_tag="L1010" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266231.1" /db_xref="GI:15672057" /db_xref="GeneID:1113678" /translation="MSKNYKKILVAIDGSEQAEEALKEAIVLAKRDNSQLFVLHATDK NSIYAAGNPVPVVPAPAIPVVPAVPVLEESADNEAKEVLDKALAIINNEVKFEEIRVD GSAKNEIVDFAKEHEIDMIVMGSSGKGALDRMLLGSTAVYVVKHAPCSVTIIK" gene 79309..79506 /locus_tag="L200005" /db_xref="GeneID:1113679" CDS 79309..79506 /locus_tag="L200005" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_835288.1" /db_xref="GI:30023973" /db_xref="GeneID:1113679" /translation="MKVTFKTLDGRTMTKEFTSVDEFVTLQNREIPAIDDSAKVLEVV ISGQVEEFSGNVADLYFKLSK" gene 79537..80157 /gene="yahD" /locus_tag="L79507" /db_xref="GeneID:1113680" CDS 79537..80157 /gene="yahD" /locus_tag="L79507" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266232.1" /db_xref="GI:15672058" /db_xref="GeneID:1113680" /translation="MTDYVFKAGRKDLAPLLLLHSTGGDEHQLVEIAEMIAPSHPILS IRGRINEQGVNRYFKLRGLGGFTKENFDLESLDEETDWLTDEVSLLAEKHDLDVHKMI AIGYSNGANVALNMFLRGKINFDKIIAFHGMQLEDFEQTVQLDDKHVFLSYAPNDMIV PQKNFGDLKGDLEDSGCQLEIYESSLGHQLMQEEVLAANKWLTETK" gene 80208..81377 /gene="yaiA" /locus_tag="L80191" /db_xref="GeneID:1113681" CDS 80208..81377 /gene="yaiA" /locus_tag="L80191" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266233.1" /db_xref="GI:15672059" /db_xref="GeneID:1113681" /translation="MAELTKIETKIPENLTLGGVHHVTAITSSAQKIYDFFTNILGLR LAKLTVNQDDYETYHLFFTEEDGHGADMTFFDFKDIPKGNHGVNNIERASFRVPTDAS LDYWTRRFDNAHVKHGEISSKFGQKTLEFEDFDGQLYQLISDQNNSGDDSKGRSWQLS NVPQEHGITGLGPVFVKVENAENLRTILETVFGFRYAGQEDDLHLFEVANGGNGAALI LQEAGEKEAYAYQGYGTIHHLALGTANPETLNYWIERIKAFRLPHSGLVDRFYFSSEY VRVAPGVLFEIATYTPGIGALDMAKSGLGAVDSYEEALITSGFWIDQTKEESGLSLSL PPHLFPGDEATKARTAASLRPLDTSDAHRDRTKDELWTVEKVLEHKAGTPAETVQ" gene 81388..81978 /gene="yaiB" /locus_tag="L81206" /db_xref="GeneID:1113682" CDS 81388..81978 /gene="yaiB" /locus_tag="L81206" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266234.1" /db_xref="GI:15672060" /db_xref="GeneID:1113682" /translation="MKSYQANELDEKTVYKLLSGSIVPRPIAWVTSQNLEGLVNVAPF SFFNVASSNPPLLSISFTGNKDSLNNLLTTKEAVVHLVNEDNVELMNQTAAPLAEHIS EAEEFSLELVPSQKVQVPSLKESNVRLETKLYHHLPLGESGHLVLLEVVNFSFAEELL DEENFHVNLNKLKPVGRLAGDDYSTLGNRFSLLRPR" gene 82576..84723 /gene="lcnC" /locus_tag="L82520" /db_xref="GeneID:1113683" CDS 82576..84723 /gene="lcnC" /locus_tag="L82520" /codon_start=1 /transl_table=11 /product="lactococcin A ABC transporter ATP binding and permease protein" /protein_id="NP_266235.1" /db_xref="GI:15672061" /db_xref="GeneID:1113683" /translation="MKFKKKNYTSQVDEMDCGCAALSMILKSYGTEKSLASLRLLAGT TIEGTSALGIKKAGEGLGFVVQVLRADASLFEMKKVPYPFIAHVIKNQKYPHYYVITG ANKNSVFIADPDPTVKMTKLSKEVFLSEWTGISLFLSPTPSYQPTKEKTSSLLSFIPI ITRQKKVILNIVIASFIVTLINILGSYYLQSMIDSYIPNALMGTLGIISVGLLLTYII QQVLEFAKAFLLNVLSQRLAIDVILSYIRHIFQLPMSFFSTRRTGEITSRFSDASSIL DAIASTILSLFLDLTIVLMTGLILGLQNMQLFLLVLLAIPLYIVVIIIFTPLFERQNH EVMQTNAILNSSIIEDINGIETIKALASEQERYQKIDYEFASYLKEAFTLQQSEAIQT AIKTTVQLVLNVLILWFGATLVMHQKITLGQLITFNALLSYFTNPITNIINLQTKLQK ARVANERLNEVYLVPSEFEEKKTELSLSHFNLNMSEISYQYGFGRKVLSEIKLSIKEN EKLTIVGISGSGKSTLVKLLVNFFQPTSGTITLGGIDLQQFDKHQLRRLINYLPQQPY IFTGSIMDNLLLGASEATSQEEIIRAVELAEIRADIEQMQLGYQTELSSDASSLSGGQ KQRIALARALLSPAKILILDEATSNLDMITEKKILKNLLALDKTIIFIAHRLSVAEMS HRIIVIEQGKVIESGSHSELLAQNGFYAQLYHN" gene 84738..86159 /gene="lcnD" /locus_tag="L84721" /db_xref="GeneID:1113684" CDS 84738..86159 /gene="lcnD" /locus_tag="L84721" /experiment="experimental evidence, no additional details recorded" /note="evidence experimental PMID:8633867; transport and binding protein; multidrug resistance; in the strain diacetylactis WM4 involved in secretion of lactococcin A; HlyD family of secretion proteins" /codon_start=1 /transl_table=11 /product="lactococcin A ABC transporter permease protein" /protein_id="NP_266236.1" /db_xref="GI:15672062" /db_xref="GeneID:1113684" /translation="MFDKKLLESSELYDKRYRNFSTLIILPLFILLVGGVIFTFFAHK ELTVISTGSIEPTKIVAKIQSTNANPIIENNLKEGKVVKENSLLLKYNGTPEQTQLSE LLTQKKQVLDKKAQLDLLQKSLTNEKNEFPTTDSFGYEKSFENYESQVKSLEATIQKS NQAVEDQNKSTESQKQAIQNQVATLQQAIQNYSEIENAVSSGGGVSQDNPYLSQYNSY QAQQATLEADLKNQKNPDETAKQATKSQEESLKSQFLSGLASSKDSLKSQIQSFNVQE SSLTGSNAYDNSQSSQILTLKTQALSASNKEMTDLNSTLTDLETKISLQKQDDQYSQV FAEQTGVLHVLPDILGMKKIPIGTPIAEIYPLLKAETQVNLTSYIPSTQISGMKVGQK VRFTVQQNLPKPEILTGIIKQIDSAPTAFKEGNAYKVSATTAINAKDLPNIRYGLQGK TVTIIGKKTYFNYFLDKIMGRTS" gene 86620..87072 /gene="yaiE" /locus_tag="L86606" /db_xref="GeneID:1113685" CDS 86620..87072 /gene="yaiE" /locus_tag="L86606" /note="transport and binding protein" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="NP_266237.1" /db_xref="GI:15672063" /db_xref="GeneID:1113685" /translation="MLLYLSNLKRWSLLIYSIFSAIVTVIYIMFNSTFYKLDLVRYSN DIDYYNKMSAILPKGLLQLNGNFSQLDSPLLIIVYLLGILICLIFLILNWNPYYKRTY TPLISMLGFLLPLLIRNGENIIWMLLLGLIIAFIGSIFYVFAVGKTYK" gene 87111..87767 /gene="yaiF" /locus_tag="L87100" /db_xref="GeneID:1113686" CDS 87111..87767 /gene="yaiF" /locus_tag="L87100" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266238.1" /db_xref="GI:15672064" /db_xref="GeneID:1113686" /translation="MKFIFSKSIIIATAFFLFILSQLPAVFLNFLNSNGDTYGIAHKN TPPFIILTLVVVTICIFIGIKCGFYQNYRKSLEWKNILLIFSLLIITFFIQKFVVQFI TSHNLYNVSHQITNQMKVENILSSLLFPGQFVAVSILAPILEESIYRACFYKLFGYYR WTFFLSCFFFSYVHSGFSWDILGYLPLSIALTYVYHRRQVLTDSILLHALFNTLLFVF" gene complement(87870..88151) /gene="yaiI" /locus_tag="L87874" /db_xref="GeneID:1113687" CDS complement(87870..88151) /gene="yaiI" /locus_tag="L87874" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266239.1" /db_xref="GI:15672065" /db_xref="GeneID:1113687" /translation="MKYFVTSLSPSKNMGTMNWQTMILDKHRVEDSYWENAKLELSKE VEWVTQSELYKKAKRNDGSGDDIILSLPVSITLETIKSDFPNANVWVYK" gene complement(88161..88313) /gene="yaiJ" /locus_tag="L200006" /db_xref="GeneID:1113688" CDS complement(88161..88313) /gene="yaiJ" /locus_tag="L200006" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_835289.1" /db_xref="GI:30023974" /db_xref="GeneID:1113688" /translation="MSWWQAIDGVISNFQSTPAWVQGKKQTSGYVPYVPGGGSWVGGP GMKPGR" gene 88652..88870 /gene="yaiG" /locus_tag="L88635" /db_xref="GeneID:1113689" CDS 88652..88870 /gene="yaiG" /locus_tag="L88635" /note="similar to LcnD of Lactococcus lactis" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266240.1" /db_xref="GI:15672066" /db_xref="GeneID:1113689" /translation="MKLTGIFLLFLIFKSFPTIFKEENAYKVSATTAINAKDLPNIRY GLQGKTVTIIGKKTYFNYFLDKIMGRTS" gene 89117..89827 /gene="yaiH" /locus_tag="L89118" /db_xref="GeneID:1113690" CDS 89117..89827 /gene="yaiH" /locus_tag="L89118" /note="similar to OrfX from AbiG region of plasmid pCI750 from Lactococcus lactis subsp. cremoris UC653" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266241.1" /db_xref="GI:15672067" /db_xref="GeneID:1113690" /translation="MMDDSFKNYWMNKLKYFSLFILLFAIYWFPDVILGYPEIYLKSL VGYDRQATATWIFLGNMAISLFLGILICYKLGYYKNTLSIFKIKNILFLLFTTIVLFI IYFFTFTYYNSHFITPGIAKEQAAYSRQIVFPFVQFISFAICAPIFEEAAFRTTIYRF FKNDKIAFIVSSISFAWMHTGANPILIVYLPMSVVLTLIYHRRRVLGESILVHCLMNA LLPTIIVFLQTITGLYYL" gene 90253..90705 /gene="yajA" /locus_tag="L90239" /db_xref="GeneID:1113691" CDS 90253..90705 /gene="yajA" /locus_tag="L90239" /note="transport and binding protein; similar to several membrane proteins" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="NP_266242.1" /db_xref="GI:15672068" /db_xref="GeneID:1113691" /translation="MNPLFSSLKRWLLLIYTIFATIITVIYIMFNSTFYKLDLVKYNN DIDYHNKMSSILSKGLLQLNGNFAQLDSFLLIFVYVLGILICFISLLLNWNTYNKRTY TPLISMLGFCLPLTVHNGENILWMVLLGLIIAFVGSIFYIFAIGKTYN" gene complement(91052..91891) /gene="tra981A" /locus_tag="L0432" /db_xref="GeneID:1113692" CDS complement(91052..91891) /gene="tra981A" /locus_tag="L0432" /experiment="experimental evidence, no additional details recorded" /note="evidence experimental PMID:8389385; transposon related function; related to a family of IS elements that includes IS2, IS3, IS150, IS600, IS629, IS861, IS904 and ISL1" /codon_start=1 /transl_table=11 /product="transposase of IS981A" /protein_id="NP_266243.1" /db_xref="GI:15672069" /db_xref="GeneID:1113692" /translation="MAQTIQTLALNVRLSCQLLDVPESSYYERINRHPSKTQLRRQYL SLKISQLFNANRGIYGAPKIHHLLLKQGEKVGLKLVQKLMKQLQLKSVVIKKFKPGYS LSDHINRKNLIQTEPTKKNKVWSTDITYIPTQQGWAYLSTIMDRYTKKVIAWDLGKRM TVELVQRTLNKAIKSQDYPEAVILHSDQGSQYTSLEYEELLKYYGMTHSFSRRGYPYH NASLESWHGHLKREWVYQFKYKNFEEAYQSIFWYIEAFYNSKRIHQSLGYLTPNQFEK VSA" gene complement(91903..92163) /gene="yajE" /locus_tag="L186703" /db_xref="GeneID:1113693" CDS complement(91903..92163) /gene="yajE" /locus_tag="L186703" /note="transposon related function; orf1 of IS981" /codon_start=1 /transl_table=11 /product="transposase" /protein_id="NP_266244.1" /db_xref="GI:15672070" /db_xref="GeneID:1113693" /translation="MQKRYSKEFKETLIAFYHSGQSVTQLSKEYDVAPATIYKWIDLY SKSNESSVSKADFLELKRQLAKVKEERDILKKVLTIFAEKKK" gene complement(92200..92805) /gene="yajF" /locus_tag="L92204" /db_xref="GeneID:1113694" CDS complement(92200..92805) /gene="yajF" /locus_tag="L92204" /note="similar to OrfX from AbiG region of plasmid pCI750 from Lactococcus lactis subsp. cremoris UC653" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266245.1" /db_xref="GI:15672071" /db_xref="GeneID:1113694" /translation="MINIWNKSKTVILALFLLFLSQVPLYYVEYENERQNLFGVANKI TVNFILIGLLIILIAIMLGIKNGFYKNAKRTLEWKNIILILILIIPSVALDILFSQFI QFHHLGRMDNQIAIDSVMGSLLWFGKILGVALLAPILEESIFRASIYKIFSNNKIAFV FSSLLFTFMHSGYSWVFLIYLPMSLAVTFIYHRRSDVILKS" gene 93621..93793 /gene="tra981B" /locus_tag="L200007" /note="evidence experimental PMID:8389385; related to a family of IS elements that includes IS2, IS3, IS150, IS600, IS629, IS861, IS904 and ISL1" /pseudo /db_xref="GeneID:1113695" gene complement(93882..94142) /gene="yajG" /locus_tag="L93886" /db_xref="GeneID:1113696" CDS complement(93882..94142) /gene="yajG" /locus_tag="L93886" /note="transposon related function; orf1 of IS981" /codon_start=1 /transl_table=11 /product="transposase" /protein_id="NP_266246.1" /db_xref="GI:15672072" /db_xref="GeneID:1113696" /translation="MKKRYSKEFKETLIAFYHSGQSVTQLSKEYDVAPATIYKWIDLY SKSNESSVSKADFLELKRQLVKVKEERDILKKVLTIFAEKKK" gene 94253..94621 /gene="yajB" /locus_tag="L94197" /db_xref="GeneID:1113697" CDS 94253..94621 /gene="yajB" /locus_tag="L94197" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266247.1" /db_xref="GI:15672073" /db_xref="GeneID:1113697" /translation="MLLEKYISYLILWKNYDKANELLKVGLLLYPNNMAFIFFKGMIQ IESVKNLSKTYLIRDLKKYIESDKQTLCDSSYRDTSSLELIIAELNELAGKKKVAKKI ITEINDDNLKYFWDQWNDNL" gene complement(94841..95143) /gene="yajH" /locus_tag="L94845" /db_xref="GeneID:1113698" CDS complement(94841..95143) /gene="yajH" /locus_tag="L94845" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266248.1" /db_xref="GI:15672074" /db_xref="GeneID:1113698" /translation="MTKYIFPNLKDNQRDLFNIINQILSRDKLSIEERKCFLIAKKNI ESGRNFDPQISELISSLQYLAHSSDVQYFFSEAQKRMLVNPGTGGSLYGWSNFESK" gene complement(95879..96028) /gene="rpmG" /locus_tag="L0096" /db_xref="GeneID:1113699" CDS complement(95879..96028) /gene="rpmG" /locus_tag="L0096" /note="in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L33" /protein_id="NP_266249.1" /db_xref="GI:15672075" /db_xref="GeneID:1113699" /translation="MRVNITLEHKESGERLYLTQKNKRNTPDKLELKKYSKKLRKHVI FKEVK" gene complement(96058..96231) /gene="rpmF" /locus_tag="L00096" /db_xref="GeneID:1113700" CDS complement(96058..96231) /gene="rpmF" /locus_tag="L00096" /note="some L32 proteins have zinc finger motifs consisting of CXXC while others do not" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L32" /protein_id="NP_266250.1" /db_xref="GI:15672076" /db_xref="GeneID:1113700" /translation="MAVPARHTSSAKKNRRRTHYKLTAPTVTFDETTGDYRHSHRVSL KGYYKGRKVRDTK" gene 96595..98376 /gene="cadA" /locus_tag="L96595" /db_xref="GeneID:1113701" CDS 96595..98376 /gene="cadA" /locus_tag="L96595" /note="transort and binding protein, cations; cation transport ATPase family (E1-E2 ATPase)" /codon_start=1 /transl_table=11 /product="cadmium efflux ATPase" /protein_id="NP_266251.1" /db_xref="GI:15672077" /db_xref="GeneID:1113701" /translation="MKNWKKLILVFVIAGVALIAYFGFNQPFLARLIVTIAGGVLAFS MLIEMIKTLRSGSYGVDLLAITAIIATLLVGEYWASLIIILMLDGGESLEDYANGRAH RALAALLDKSPDIAHVQKGDKVVDLPIEHVEVGSHLLIRPMEIIPIDGKLISEAVVLD TASLTGETKPNELVKGDPVLSGAINGNSSIQIETTVIAAESQFQKIVELVKETEKTPA QFVRLADRYAVPFTIIAYLIAAVAYFIAGDPVRIAEVLVVASPCPLILAAPIAFVSGM SRSSQNGALIKNGTVIEKLAKAREIFLDKTGTITEGTIKVDSLKPIETVDEVELLQLV YTVEKSSGHILAKAVVEYAENKKVQPLKLTSLTEVAGLGVIGEIEGQEIKIGRSSFAF APDNLNYETAFYVSKAGKYVGAVTFSDTLRPEAKETIAQMRKIGLEKITMLTGDNQLV ADKIASTVGIDNVYAGLMPDEKLKFIKNATNRPVIMIGDGVNDAPALATADVGISIGV GSGTVASEAADIVLLQNDLRKVTTSIEISRDTLKIAKQAVMIGIIICIILMFVAALGV IPAVIGALFQEIIDVVSILYALRALRG" gene complement(98429..99214) /gene="parA" /locus_tag="L0210" /db_xref="GeneID:1113702" CDS complement(98429..99214) /gene="parA" /locus_tag="L0210" /codon_start=1 /transl_table=11 /product="chromosome partitioning protein" /protein_id="NP_266252.1" /db_xref="GI:15672078" /db_xref="GeneID:1113702" /translation="MVEQITQLKLSTIVKNPYQPRLVFDEDKLKELANSIQENGVLQP IIVRKSKLVGYELLAGERRFQASKLAGLETIPAIIRSYSDEEMMTLSILENLQRENLN PLEESKSLAQLADKLGMTHDQIAKALGKSRSYVSNLIRLLGLPDTILKHVENRDISPA HARTLLAEKNPKKQLELVDKIIKEQLNVRALEAIIYGEEKFTDKSISKLNINLFTDET EKELMKKLGNRVKIQANKKYQGNLSIHFDNLDELEHLIKLLKK" gene complement(99269..100528) /gene="cshA" /locus_tag="L99272" /db_xref="GeneID:1113703" CDS complement(99269..100528) /gene="cshA" /locus_tag="L99272" /codon_start=1 /transl_table=11 /product="recombination factor protein RarA" /protein_id="NP_266253.1" /db_xref="GI:15672079" /db_xref="GeneID:1113703" /translation="MAQNLARRMRPRNIDEIVGQKHLVGKGKIIRRMVETQLLSSMIL YGPPGIGKTSIASAIAGTMNVAFRTFNATTDTKKRLQEIASEAEFSGQLVLLLDEIHR LDKPKQDFLLPLLENGQIILIGATTENPYFSVVPAIRSRVQIFELKPLEPEDLEFAVN LSLQDKERGFDFDVTIDDDALYFLIHSTNGDLRSTFNALELAVLSSEEHHVTLDDMEN SLQRKAATFDKDGDAHYDLLSALQKSIRGSDVNASLHYAARLIEGGDLQSLARRLTVM AYEDIGLANPDAALHTVSALSAAEKLGFPEARIPLANIIIDLALSPKSNAAYLAMDEA IADLGKYGNLAVPPHLQDGHYAGAKDLGRSVEYQYAHNFPNHWVNQQYLPDKIKNADY FRPDDMGRYEKALHSRKEWIDEQKKRS" gene complement(100572..101060) /gene="ybaH" /locus_tag="L100575" /db_xref="GeneID:1113704" CDS complement(100572..101060) /gene="ybaH" /locus_tag="L100575" /note="DNA replication, restriction, modification, recombination, and repair" /codon_start=1 /transl_table=11 /product="acetyl transferase" /protein_id="NP_266254.1" /db_xref="GI:15672080" /db_xref="GeneID:1113704" /translation="MEIRKIEPRDFVKVAQLENENWILASTPHVMDSSAEKIIGKIMT GTTYFLAVENDEILGILDYGPRHKSEFGRHTVTFGIMTAQEARGKGVATTLINFFIDF AKKEGFKKITIQVMGSNPAALKLYNKLGFVEEGRLKKEFFIDGEYIDDCILAFYLDKS LM" gene 101212..101679 /gene="ybaA" /locus_tag="L101209" /db_xref="GeneID:1113705" CDS 101212..101679 /gene="ybaA" /locus_tag="L101209" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266255.1" /db_xref="GI:15672081" /db_xref="GeneID:1113705" /translation="MAKFGFLDVLEEVLEKGFTYDFEMNWDKRNFAVEVSFLLEAENS SGALLTDAEGVESAENIVYEDAVLFYNPAKSRFDENDYLATIPYGEKGLSREFLAYFA QFLQESADQGLDDLMDFLADEAAEEFSVNWDKEAFENGIADLSETDFYKYPRY" gene 101709..103262 /gene="ybaB" /locus_tag="L101706" /db_xref="GeneID:1113706" CDS 101709..103262 /gene="ybaB" /locus_tag="L101706" /note="transport and binding protein; contains two ATP binding domains" /codon_start=1 /transl_table=11 /product="ABC transporter ATP binding protein" /protein_id="NP_266256.1" /db_xref="GI:15672082" /db_xref="GeneID:1113706" /translation="MSILNVKNLSHGFGDRAIFEDVSFRLLKGEHIGFVGANGEGKST FMNIITGTLVPDEGKVIWSKKHRVGYMDQHAVLGKGKTTREALAEAFQYLFDIEAQIN DTYMKMAEMSEDEMNAALENVGELQEELDNSDFYLIDAKVEETARGLGLTPLLDKDVA ELSGGQRTKILLGKLLLEKPDILLLDEPTNYLDEEHILWLKNYLKNYENAFILISHDV PFMDEVVNIIYHVHGLGITRYSMGYAEFERVFEEKKAQLESLHNAQVAEQAKLKDFIA RKKANVATSGQAKAREKKLAKMEIVETISEKPKPHFDFKFSRKPSRLVFEAKDLVIGY NEPLSSEINLKVESGQKIAFIGSNGIGKSTLLKSLMGLIPSLDGEVEKGNFQDIAYYE QEIKNPSQKTVLDDLWDEYPSWNQAELRGALARVGLTAKQIESRVYVLSGGEQAKLRF AKLMNTESNILILDEPTNHLDVDAKEELKRALIEYPGTVLMVSHEPEFYEGLVSDVIN CEEWTTRIL" gene 103393..103677 /gene="ybaC" /locus_tag="L103321" /db_xref="GeneID:1113707" CDS 103393..103677 /gene="ybaC" /locus_tag="L103321" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266257.1" /db_xref="GI:15672083" /db_xref="GeneID:1113707" /translation="MTQKLHPWENPEQDYARTLAKRRSERRYRSLQLVKTLKILLTEF KKYDVNNFNSEILSWIDLLEDAVEYVDDEDFKSAKKFVSRMQRELKKLEK" gene 103715..104203 /gene="ybaD" /locus_tag="L103661" /db_xref="GeneID:1113708" CDS 103715..104203 /gene="ybaD" /locus_tag="L103661" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266258.1" /db_xref="GI:15672084" /db_xref="GeneID:1113708" /translation="MKSYSFQAELEIIGINPFVAVPPDILQKIFQDSGREKSPIPICG QINEKTYQQNLMFFKGDWRLYVNTTMLKNSPKRIGEIFDFTISYDSEPRIVKQPQVLS EALAKNPEAKKVFDQLIPSKQVEINRYIARLKTEEAIERNVRRAIGFLLGKNSFVGRD KP" gene 104221..105174 /gene="prmA" /locus_tag="L104221" /db_xref="GeneID:1113709" CDS 104221..105174 /gene="prmA" /locus_tag="L104221" /note="methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype" /codon_start=1 /transl_table=11 /product="ribosomal protein L11 methyltransferase" /protein_id="NP_266259.1" /db_xref="GI:15672085" /db_xref="GeneID:1113709" /translation="MNNWNSITIKISREAGEAISALLIEAGSAGVEINDSADYLNHED QFGEVLPEIEQSDFVEITAYYPENMPIVELKAEIEHKIANLSDYFSLTGLSVTTNNLS ETNWAEAWKKYFEPARITHDLTIVPSWTEDYVATGSEKLIRLDPGMAFGTGTHPTTKM SLYALEQVLRGGETLLDVGTGSGVLSVAASYLGAAEIFAYDIDEVAVRVALENIELNP GHEKIHVSANNLLEGIDKKADVIVANILADILVLMTEDAFRLVKEEGYLIMSGIIADK ADMVIASAEKAGFFLETRMIQGEWNCLIFKKTENREGVIGG" gene 105274..106026 /gene="ybaF" /locus_tag="L105256" /db_xref="GeneID:1113710" CDS 105274..106026 /gene="ybaF" /locus_tag="L105256" /note="in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase" /codon_start=1 /transl_table=11 /product="16S ribosomal RNA methyltransferase RsmE" /protein_id="NP_266260.1" /db_xref="GI:15672086" /db_xref="GeneID:1113710" /translation="MANQYFVFKKLPELGEEFIIENQAAAHHIFTVMRAKSGDQIRLV FTDGEIGLSEVISPSDQSVKLIKLLTESSELPVQITVAVGFPKGDKLDFIVEKSTELG ATAIWSAPFKASVSKWDKKKLTKKQEKLEKVALGAAEQSRRQMIPELQLFEQFTDLLD KFSDFDQVLIAYEESAKMGEKTMFKQALTEMSLNQKVLIIFGPEGGISPDEITKFSDL GAKMIGLGPRILRAETAPLYALSSISAYFELL" gene 106055..107011 /gene="ybaG" /locus_tag="L106031" /db_xref="GeneID:1113711" CDS 106055..107011 /gene="ybaG" /locus_tag="L106031" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266261.1" /db_xref="GI:15672087" /db_xref="GeneID:1113711" /translation="MKKRAQRNKKRIRWASVLTVFVLLIGIIAIAFAGVHLLSPKTNT SPKSSQTSSQEKAKSTASSSASQPKETKWLAGTNENQLPILMFHYVTSRADQLPQDSN NINIVTFENELKALKEKGYTTVSGSDAEKILTTKEKPSDKMVWLTFDDGSVTMYTEIF PLLKKYNMHATNFIITGYVNKGQGGILTWEQIKEMKASGLVDFGSHTVSHPDLGKLTL EAQRTELEQSKADLDKNLEQKTDIICYPAGGYNQNTLNLANELGYKFGLLDPGRNGAI AIAAKESDGLLTLPRFRMMSSTTTEQMLQMIQPSTDYNEKNK" gene 107212..109434 /gene="relA" /locus_tag="L0213" /db_xref="GeneID:1113712" CDS 107212..109434 /gene="relA" /locus_tag="L0213" /EC_number="2.7.6.5" /note="general regulatory function" /codon_start=1 /transl_table=11 /product="ppGpp synthetase I" /protein_id="NP_266262.1" /db_xref="GI:15672088" /db_xref="GeneID:1113712" /translation="MPKEPDLTGAEVVNICSDYMNETDILLVEKALACASLAHADQYR ASGEAYFVHPTQVAGILAKLKLDAVTVSCGFLHDVVEDTNFTQGDLQELFGDEIAEIV DGVTKLGKVEYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRPDKQ KRISRETMEIYAPLAHRLGIASIKWELEDLSFRYLEEAEFYRIRGLMNEKRTAREALV AEVIGKLQERVEKAGVDAEIYGRPKHIYSIYRKMHDKKKRFDEIYDLIAIRCITETTS DVYTTLGYIHDLWKPMPGRFKDYIANPKANGYQSVHTTVYGPKGPMEFQIRTREMHQI AEFGVAAHWAYKQGIKAKVDVHEISETLNWIHELVELREEAGDSAEDFVKAVQEDILS DKIYVFTPNGEVQELPRGSGPIDFAYAIHTKVGDHATGAKVNGRMKPLSVQLKTGDRV EIITSSSSFGPSRDWINLVKTNKARNKIKQFFKNQDKELSVNKGREMLQEALEEGGFV PNQYLDKKHLDEVFNKISYRNAEALYAAIGFGELSATTIANRLTENERREVERAKQKA EAEELMKGEVKRESSKNIMKIRHDGGVSVSGIDSLLVRIAKCCNPVPGDPIVGYITKG RGVSVHRADCQNVRSMEDFEQRLVEVEWDDSENLVKEYVANIDVYGFNRPGLLNDVMQ VLSNSTKNLISINAQPTKDKKMANIHIALGIKNLSDLTLIVDKIKMTPDVYSVKRTNA" gene complement(109450..110385) /gene="ybaI" /locus_tag="L109453" /db_xref="GeneID:1113713" CDS complement(109450..110385) /gene="ybaI" /locus_tag="L109453" /note="glycosyltransferase family 2" /codon_start=1 /transl_table=11 /product="glycosil transferase" /protein_id="NP_266263.1" /db_xref="GI:15672089" /db_xref="GeneID:1113713" /translation="MEELAIVVPVYNEEETLELFIKEVNDKTEKLELKKVFYFVNDGS SDQTLPLIKKLASQVDNINYISFSRNFGKEAALLAGLEATTEPLVTVMDVDLQDPPEL LVSMYQKLQEGYDSVGARRISRSGESPLISFFSRLFYKIINKVSTTPIVDGARDFRLM TRQVVDSILTLRENNRFSKGLFSWVGYDVTYLEYENHERSAGQTSWSFSQLLRYSIDG IINFSEMPLNIATFVGFFSFLASLLLSIFYLLKTLIYGDPVQGFPTLIVLILLLGGLQ LLSLGIIGKYIAKIFLETKKRPNYIIKESNLKELD" gene 110576..111031 /gene="ybbA" /locus_tag="L110564" /db_xref="GeneID:1113714" CDS 110576..111031 /gene="ybbA" /locus_tag="L110564" /note="hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine" /codon_start=1 /transl_table=11 /product="D-tyrosyl-tRNA(Tyr) deacylase" /protein_id="NP_266264.1" /db_xref="GI:15672090" /db_xref="GeneID:1113714" /translation="MKIVIQRVKSASVSIDGVIKGKINQGFLLLVGVEDADSNFDLDY AVRKIAQMRIFSDEADKMNLSVQDIQGEILSISQFTLYAETKKGNRPSFSAAGKPDFA KAMYEKFNDSLAQIVPVKAGVFGADMQVELINDGPVTIILDTKEARKNA" gene 111024..112019 /gene="ybbB" /locus_tag="L111003" /db_xref="GeneID:1113715" CDS 111024..112019 /gene="ybbB" /locus_tag="L111003" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266265.1" /db_xref="GI:15672091" /db_xref="GeneID:1113715" /translation="MPKRLQKSSVKKWVPVRSVSKIKTYQSSEKPDQVGEIWQNNIIG SLDNGYSKEQARKQQSQNLTERQKRKIEEMQSNPEMIQAREELKEEFLNTHPQYAKMT SEELQESMTHHALEDEKLRKQKLRHHIEAFADGIIAVIITIMLLEIPVPSGNQGYWEF ISSVGIFLVSFVVTANFWFNRHKIFALTEEITEKIIVQDFIFIGLLSLIPLLTKWIMV APTSFSALNFGLVLIVILLQQELLSYSITKDHFHKMPKSFKFWRRVWLIRLFSTILMN VVIMIIAIIFPFYGHWLFVIVPIFNFLFRMVNDRNQEEEVYAATRSIGVPYLKEG" gene 112022..112645 /gene="ybbC" /locus_tag="L111950" /db_xref="GeneID:1113716" CDS 112022..112645 /gene="ybbC" /locus_tag="L111950" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266266.1" /db_xref="GI:15672092" /db_xref="GeneID:1113716" /translation="MTVKNIIFDLGGVILDLGFERMVNSFENLGIKDFSAYFNPQKQV DFFEKLELGLISPEIFYDKFREATNSQLTDEIIEKNWNLILKDFQKERMDLLTELSAD FSLYLFSNTNAIHAKCFEQRCIEEMGQPLSTYFRKTYYSHDLHLRKPTVESFQEVLRQ SNLKADETLFIDDNADNILGAQAAGLKTYHLKAPKVLTELNFQEIIY" gene 112785..114194 /gene="ctrA" /locus_tag="L112776" /db_xref="GeneID:1113717" CDS 112785..114194 /gene="ctrA" /locus_tag="L112776" /note="transport and binding protein; amino acids, peptides and amines; similar to many cationic amino acid transporters" /codon_start=1 /transl_table=11 /product="cationic amino acid transporter" /protein_id="NP_266267.1" /db_xref="GI:15672093" /db_xref="GeneID:1113717" /translation="MGFMRKADFELYRDADKHYNQVLTTRDFLALGVGTIISTSIFTL PGQVAAQFAGPGVVFSYLLAALVAGFVALAYAEMSTVMPFAGSAYSWISVLFGEGFGW IAGWALLAEYFIAVAFVGSGFSANLQQLLAPLGFHLPKVLANPFGTDGGVVDIISLLV ILLSAIIVFRGASDAGRISQILVVLKVAAVIAFIIVGITVIKPANYHPFIPPHNPKTG FGGFSGIWSGVSMIFLAYIGFDSIAANSAEAKKPQKTMPRGIIGSLLIAVVLFAAVTL VLVGMHPYSAYAGNAAPVGWALQQSGYSVLSEVVTAIALAGMFIALLGMVLAGSRLLY AFGRDGLLPKGLGKMNARNLPANGVWTLAIVAIVIGAFFPFAFLAQLISAGTLIAFMF VTLGIYSLRRRQGKDLPEATYKMPFYPVLPALGFIGSLFVFWGLDVQAKLYSGIWFLI GILIYFAYGNRRSRKSEEK" gene 114343..114984 /gene="ybbE" /locus_tag="L114325" /db_xref="GeneID:1113718" CDS 114343..114984 /gene="ybbE" /locus_tag="L114325" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266268.1" /db_xref="GI:15672094" /db_xref="GeneID:1113718" /translation="MKEYEKQHRIFYVFLRNLVAFLLLILNGKSKYYNVDRIPKDENY ILVAPHRMAWEPVWFAFATRPKQFIFMAKKELFKGFGGWWIKMCGAFPVDRENPGIKP LKHAVKMLKESDKSMIMFPSGSRHSAEMKGGVAVIAKMAKVRIVPAVYQGPLTMKGVF KRQKVSINIGHPIDISDIKKMDEAGIAEVNRRMEVAFAELDKELNPDFHYEAK" gene complement(115022..115513) /gene="rmaD" /locus_tag="L115025" /db_xref="GeneID:1113719" CDS complement(115022..115513) /gene="rmaD" /locus_tag="L115025" /note="MarR-family regulator" /codon_start=1 /transl_table=11 /product="transcription regulator" /protein_id="NP_266269.1" /db_xref="GI:15672095" /db_xref="GeneID:1113719" /translation="MTSADLNQQISKELHELRHATDNRSQERSWILAQLDNDKLEKEV LTLSVVALHILSALTKEDLTGIELATKLSVTRGGVTRAVQNLIKYQFLTTYQSESDKK KIFYHLTVKGRKVATIHDKMHKIMDIRLGQIFDKYNEQEKSIILSFLSDFNLTEAGLF DSE" gene complement(115548..116192) /gene="acpD" /locus_tag="L115551" /db_xref="GeneID:1113720" CDS complement(115548..116192) /gene="acpD" /locus_tag="L115551" /function="fatty acid and phospholipid metabolism" /note="converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine residue from ACP; probable NAD(P)H dehydrogenase" /codon_start=1 /transl_table=11 /product="acyl carrier protein phosphodiesterase" /protein_id="NP_266270.1" /db_xref="GI:15672096" /db_xref="GeneID:1113720" /translation="MTTLLIILAHPHTDDFSWSLATVEEFKKSYQESHPLDKIIIRDL FSEKVPALDNETFAAWKRNKYAPDTLSAEDKNLLHRHEEYLEEFLSADKYVFVNPMYN GFVTAELKQYIDVIAVPRKLFRYTENGPIGLLEGKKSLHIQSAGGFYHNEQDPTHMAN DLGAAYIDQTMKMVGLTDENRQQLFVEGYARYPERADELKEKAFTSAENFGKAF" gene 116366..118963 /gene="secA" /locus_tag="L0334" /gene_synonym="azi" /gene_synonym="div" /db_xref="GeneID:1113721" CDS 116366..118963 /gene="secA" /locus_tag="L0334" /gene_synonym="azi" /gene_synonym="div" /function="protein and peptide secretion" /note="functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins" /codon_start=1 /transl_table=11 /product="preprotein translocase subunit SecA" /protein_id="NP_266271.1" /db_xref="GI:15672097" /db_xref="GeneID:1113721" /translation="MPNIIRKLVENDKKELKKLNRMALQVESFADEMEHLTDEQLKAK TPELKERIAKGESLDDLLYEAFAVCREAARRVLGLYPFHVQIMGGIVLHNGDVPEMRT GEGKTLTATMPVYLNALSGKGVHVVTVNEYLATRDMTEMGELYSWLGLTVGLNLNSKS PEEKREAYNCDITYSTSAELGFDYLRDNMVTRAEDMVQKPLNYALVDEVDSILVDEAR TPLIISGQAESSSALYYRADQFTKTLKGQNLNVATSEYEEGDDYKIDLQSKTISLTEE GIDKAEKFFQIENLYDMENVALTHFVDNALRANFIMLHDIDYMVDENQEVLIIDQFTG RTMPGRRYSDGLHQAIEAKEAVPIQDESKTMASITIQNYFRMYKKLSGMTGTAKTEEE EFREIYNIQITPIPTNRPVQRLDHPDLLYPTLEAKFKAVIDDIKRRHAEGQPILIGTV AVETSELISKKLVEAKIPHEVLNAKNHFREAQIIMNAGQQGAVTIATNMAGRGTDIKL GPGVIDHVDPEFRGLAVIGTERHESRRIDNQLRGRSGRQGDPGVSQFYLSLEDELMKR FGSERVSAFLDRMRISGEDAVIKSGLITRQIESSQKRVEGNNYDSRKQVLQYDDVIRE QREVIYAQRQEVILATEDMTPVLMGMFKRTIDRQVDGHELAGSLKDEENVKNLLQTLH NTMLPEDGIELSELTGLSVQAMKDLIFDKVKARYASQMEKLSDPERQLEFQRAVILRV VDNNWSEHIDALDQMRQSVGLRGYAQNNPIVEYQEESYKMYNNMIGAIEFEVTRLMMK AQIQPQTAIRQEAPRMTTTASQENITNVDTEHSVSEEISFENVGRNDLCPCGSGKKFK NCHGRTHIA" gene 119092..120129 /gene="aroF" /locus_tag="L0063" /db_xref="GeneID:1113722" CDS 119092..120129 /gene="aroF" /locus_tag="L0063" /EC_number="2.5.1.54" /note="catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive" /codon_start=1 /transl_table=11 /product="phospho-2-dehydro-3-deoxyheptonate aldolase" /protein_id="NP_266272.1" /db_xref="GI:15672098" /db_xref="GeneID:1113722" /translation="MSFKEISPKINIDAIKMLGHLNSEQQEKKLQRDKELEAIIKGED DRLLLIIGPCSSDNEEAVLEYARRLAKLQEAVKDKIFMVMRVYTAKPRTNGDGYKGLI HEPDADGHTDLINGIKMVRDLHYKVITETGLTTADEMLYPENLPMVDDLVSYHAIGAR SVENQQHRFVASGIDVPTGLKNPTSGNLKVMFNGIYAAQQSQDFLFGRAEVQTSGNPL AHAILRGGQDENGKYHPNYYTDNLLDTIEIYEKMGLKNPFIVIDTNHDNSGKKFMEQI RIVRQTLVNRDWDDKIRQNVRGFMIESYLEDGRQDKPEVFGKSITDPCLGWDKTEALV QEIYEAENKNN" gene 120380..120646 /gene="ptsH" /locus_tag="L120335" /db_xref="GeneID:1113723" CDS 120380..120646 /gene="ptsH" /locus_tag="L120335" /note="transport and binding protein; PTS system" /codon_start=1 /transl_table=11 /product="phosphocarrier protein HPr" /protein_id="NP_266273.1" /db_xref="GI:15672099" /db_xref="GeneID:1113723" /translation="MASKEFHIVVETGIHARPATLLVHTASKFTSEITLEYKGKSVNL KSIMGVMSLGVGQGADVTISAEGADADDAISTIAETMTKEGLAE" gene 120649..122376 /gene="ptsI" /locus_tag="L120628" /db_xref="GeneID:1113724" CDS 120649..122376 /gene="ptsI" /locus_tag="L120628" /EC_number="2.7.3.9" /note="transport and binding protein; PTS system; PTS system enzyme I" /codon_start=1 /transl_table=11 /product="phosphoenolpyruvate-protein phosphotransferase" /protein_id="NP_266274.1" /db_xref="GI:15672100" /db_xref="GeneID:1113724" /translation="MTTMLKGIAASSGVAVAKAYLLVQPDLSFETKTIADTANEEARL DAALATSQSELQLIKDKAVTTLGEEAASVFDAHMMVLADPDMTAQIKAVINDKKVNAE SALKEVTDMFIGIFEGMTDNAYMQERAADIKDVTKRVLAHLLGVKLPSPALIDEEVII VAEDLTPSDTAQLDKKFVKAFVTNIGGRTSHSAIMARTLEIPAVLGTNNITELVSEGQ LLAVSGLTGEVILDPSTEQQSEFHKAGEAYAAQKAEWAALKDAETVTADGRHYELAAN IGTPKDVEGVNDNGAEAIGLYRTEFLYMDAQDFPTEDDQYEAYKAVLEGMNGKPVVVR TMDIGGDKTLPYFDLPKEMNPFLGWRALRISLSTAGDGMFRTQLRALLRASVHGQLRI MFPMVALVTEFRAAKKIYDEEKAKLIAEGVPVADGIEVGIMIEIPAAAMLADQFAKEV DFFSIGTNDLIQYTMAADRMNEQVSYLYQPYNPSILRLINNVIKAAHAEGKWAGMCGE MAGDQTAVPLLMGMGLDEFSMSATSVLQTRSLMKRLDSKKMEELSSKALSECATMEEV IALVEEYTK" gene 122491..122805 /gene="ybcC" /locus_tag="L122461" /db_xref="GeneID:1113725" CDS 122491..122805 /gene="ybcC" /locus_tag="L122461" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266275.1" /db_xref="GI:15672101" /db_xref="GeneID:1113725" /translation="MCYFNVKGATRMISGEEGYSLILILILPSQININFWLILTSKQT SGSVFNIIALPILMALPNLIQRVMTSNSIYWTKQKYIILILNYILLLVTTFWLLTLPF GQ" gene complement(122846..123145) /gene="ybcG" /locus_tag="L122849" /db_xref="GeneID:1113726" CDS complement(122846..123145) /gene="ybcG" /locus_tag="L122849" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266276.1" /db_xref="GI:15672102" /db_xref="GeneID:1113726" /translation="MMNMQSMMKQAQKLQKQMQVSQEEIANTTFVGKSAQDLVTVEFS GDRTLKSLDIKPDVIDPEDPETLQDMVTDAVNDALSQIEKVTEQKLGKFTKGLPF" gene complement(123360..123448) /locus_tag="L200141" /db_xref="GeneID:1113598" tRNA complement(123360..123448) /locus_tag="L200141" /product="tRNA-Leu" /db_xref="GeneID:1113598" gene complement(123533..124468) /gene="ybcH" /locus_tag="L123536" /db_xref="GeneID:1113727" CDS complement(123533..124468) /gene="ybcH" /locus_tag="L123536" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266277.1" /db_xref="GI:15672103" /db_xref="GeneID:1113727" /translation="MKKFRKKQIWRVIIGLFALLLVINLGATLYFYQIACVRNNQQIG QVKSSSPNYSLVQKFDKLSKSTESIKNDGLKLDAWYVPAEHKTNNTVIVVHGFRQDKS AMRQYGQLFHELGYNVLMPDNRGAGQSEGKFITFGYHDKFDVIAWANYLTDKNPESQI SLYGLSMGASTVMMASSEKSLPSSVKNIIEDCGYTNAWDEITYQAKESYNIPPFPLVY SVSLESKLRQGWFFQEASATKALTKDKLPILLIHGSNDTYVPTSMVYENYKAVKKGTP KELLVIKGAAHAKSFETNPELYRQTISKFMKAYNP" gene 124677..125030 /gene="sugE" /locus_tag="L124677" /db_xref="GeneID:1113728" CDS 124677..125030 /gene="sugE" /locus_tag="L124677" /note="chaperones" /codon_start=1 /transl_table=11 /product="SugE protein" /protein_id="NP_266278.1" /db_xref="GI:15672104" /db_xref="GeneID:1113728" /translation="MVVLFLAEEAKMTWIYLLIAGTFEVAWATTMKLSHGFSNLKFTL LTIIGMIASFGFLALALKKLPLGIAYPIWTGIGAVGSILIGLILFKDKIPPLTWLFIA CLVVGIIGIKVTSGH" gene 125152..126315 /gene="blt" /locus_tag="L125116" /db_xref="GeneID:1113729" CDS 125152..126315 /gene="blt" /locus_tag="L125116" /note="multidrug resistance" /codon_start=1 /transl_table=11 /product="multidrug efflux transporter" /protein_id="NP_266279.1" /db_xref="GI:15672105" /db_xref="GeneID:1113729" /translation="MKNKKSMMNLAISNLFLVFLGAGLVIPVLPTLKEQMHFSGTTMG MMISIFAIAQLVASPVAGALSDKIGRKKLIAIGMIIFSFSELLFGLAQAKTGFYISRA LGGVAAAMLMPSVTAYVADMTTIAERPKAMGLVSAAISGGFIIGPGVGGFIAHFGIRV PFYVAAILAFLGFILTITILKEPERTIESHQEIEKVSFLDILKNPLFGSLFIIILISS FGLQAFESIYSIMASINFGFSMSEIALVITVSGILALFFQLFLFDAIVNKIGELGLIQ LTFFASAIFIAVIAFTKSNLVVALSTFVVFLAFDLFRPAVTTYLSKHAGNRQGAINGL NSAFTSFGNILGPMAAGYMFDLNHLFPYYISAIILLGTGFLSLFLNRKNFSKI" gene complement(126511..126597) /locus_tag="L200140" /db_xref="GeneID:1113597" tRNA complement(126511..126597) /locus_tag="L200140" /product="tRNA-Ser" /db_xref="GeneID:1113597" gene 126757..127950 /gene="argG" /locus_tag="L126739" /db_xref="GeneID:1113730" CDS 126757..127950 /gene="argG" /locus_tag="L126739" /EC_number="6.3.4.5" /function="arginine biosynthesis" /note="catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming" /codon_start=1 /transl_table=11 /product="argininosuccinate synthase" /protein_id="NP_266280.2" /db_xref="GI:30023975" /db_xref="GeneID:1113730" /translation="MGNKKIVLAYSGGLDTSVAVKWLTDKGFDVIADCMDVGEGKDLN FIHDKALQVGAVESVVLDCKEEFAKIFVGAALKGNLMYENKYPLVSALSRPLIAQKLV EVAKEKGATAIAHGCTGKGNDQVRFEVAIHSLAPELEVIAPVREWHWAREEEIEYANQ NGVPIPADLDNPYSIDMNLWGRAIEAGVLENPWNTCPEDAFFMTNSVENAPNEAEFIE VEFKEGLPIALNGKSLELHEIIKKVNIIAGKHGIGRIDHIENRLVGIKSREFYECPAA ITLLKAHKDLEDLTFVRELAHFKPVLENELANLIYNGLWFNPATKALIAYLDETQKVV NGIVKIKLYKGLATPVGRKSTNSLYSEKLATYTAADEFDQAAAVGFIKLWGLPTQVNA QVNLK" gene 127981..129360 /gene="argH" /locus_tag="L0114" /db_xref="GeneID:1113731" CDS 127981..129360 /gene="argH" /locus_tag="L0114" /EC_number="4.3.2.1" /function="arginine biosynthesis" /note="catalyzes the formation of arginine from (N-L-arginino)succinate" /codon_start=1 /transl_table=11 /product="argininosuccinate lyase" /protein_id="NP_266281.1" /db_xref="GI:15672107" /db_xref="GeneID:1113731" /translation="MVEKLWGGRFEASLDKQTEEFGASIKFEQRLAPFDLKGSLAHVK MLGETGIITTEESKKIAEGLKKVEEKLLNGQIEFKMENEDIHMNMESYLHQEIGPLAG KLHTARSRNDQVVTDMHLYLKSILEAVLEALKVLRETIVKLAVNQIDTIMPGYTHLQH AQPISFGQHLMAYYQMLTRDFERFEFNVKHTDMNPLGAAALAGTTFPIDRMLTTKLLG FEKAYDNSMDAVSDRDFILEFLSNASLLMMHLSRFCEELLLWSSHEFKFVSLSDTYST GSSIMPQKKNPDMAELIRGKTGRVYGNLTALLTVMKGLPLAYNKDFQEDKEGMFDSAD TIITSLTVMNGMLSTLTVNRVNMEKSTEQDFSNATELADYLATKGLPFRKAHELVGLL VLDCIKKGIYLQDVNLQDYQMLSPLINEDVYEVLKSRTAVSRRNSLGGTGFESVKKQI EEAKKELQI" gene complement(129376..130572) /gene="pmrB" /locus_tag="L129379" /db_xref="GeneID:1113732" CDS complement(129376..130572) /gene="pmrB" /locus_tag="L129379" /note="transport and binding protein; multidrug resistance; similar to PmrA of Streptococcus pneumoniae" /codon_start=1 /transl_table=11 /product="multidrug resistance efflux pump" /protein_id="NP_266282.1" /db_xref="GI:15672108" /db_xref="GeneID:1113732" /translation="MKESWQRNLIVLWFGTFMTGIGSSLIAPFISLYISTLGHYSKTE LNIWSGLVFSSTFIVLAIVSPLWGRLADQKGRKLMLLRASLGMAISISLMAFVTAAWQ LLILRMLLGAFSGFVSNSMALMASSAPKEKSGAVLSLLTTGSVAGTLIGPIIGGILVN ITGYRRVFSVTGIIMFLVFFLALFFVKEIFKPVEKKNMLSYKQVWEVVTHPAIIWGMF FATLITQMTNQSINPVLSLYVQELMHGQGNITFMAGIVAAAPGIVTLVAAPFLGRLGD KVGQRKILGFGLFFSLIVFSITAMTTNVWFLIVMRLLVGVSDAAILPSVQAILAKESP QAITGRIFSYNQSAQSIGAFAGPLLGSAIAGFIDYRYVFVGSAILVVFNLINYFTHTK SLAVKN" gene 130767..131342 /gene="ybdA" /locus_tag="L130713" /db_xref="GeneID:1113733" CDS 130767..131342 /gene="ybdA" /locus_tag="L130713" /note="similar to Escherichia coli tetracycline repressor protein" /codon_start=1 /transl_table=11 /product="transcription regulator" /protein_id="NP_266283.1" /db_xref="GI:15672109" /db_xref="GeneID:1113733" /translation="MARIALTRDKIVQATIELAGKIGLSNVSFPRLAEYFGIKAPSLY NHFKNMEEVRVATAVYLQKELNCELTHAMVGLTPLAALRAYAESYKRFAEKYEAVYEL INVIHQTNNGELEYLAKENIRLVRRSLENFHLSEEENFHISRMFRSTLHGFITLTQLG YFRQSGSISKEESFTYMVDHLLSRLDNPENI" gene 131494..131847 /gene="rnpA" /locus_tag="L131443" /db_xref="GeneID:1113734" CDS 131494..131847 /gene="rnpA" /locus_tag="L131443" /EC_number="3.1.26.5" /note="protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates" /codon_start=1 /transl_table=11 /product="ribonuclease P" /protein_id="NP_266284.1" /db_xref="GI:15672110" /db_xref="GeneID:1113734" /translation="MAIKKTYRVKRSKDFDQIFSAKHSFANKKFVVYKLNTNQPHFRV GLSVSKKLGHAVLRNRIKRLLRHAIAEFKPYLTDEDFVIIARSGVETLSFEEVKKNLK HVLKLSKIYVDGEND" gene 131844..132653 /gene="ybdC" /locus_tag="L131778" /db_xref="GeneID:1113735" CDS 131844..132653 /gene="ybdC" /locus_tag="L131778" /note="similar to SpoIIIJ protein of Bacillus subtilis; attached to membrane by a lipid anchor" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266285.1" /db_xref="GI:15672111" /db_xref="GeneID:1113735" /translation="MKKKFSLIAMAGAALLLLTACGTTAVTSSSTNLWDQIVYGFAQV IRFLSFGGLTGVGIILFTIVIRAALLPLMNIQIKSSQRMQEIQPEIKKIQAKYPSKDM ESRRLMNEEIQKLYAENKVNPYMGCLPLVVQMPVLWALYQALSRVDFLKHGTFLWFEI GAKDPTFILPILAAVFTFLSSYLMMKSAPERNAMTTSMTYIMPIFILIMGVNFAAGIA LYWVISNAFQVFQTMLLANPYKIIAAREAKVQVEKDKIKAREKALKKARKK" gene 132742..133656 /gene="ybdD" /locus_tag="L132712" /db_xref="GeneID:1113736" CDS 132742..133656 /gene="ybdD" /locus_tag="L132712" /note="similar to spoIIIJ-associated protein Jag protein from differenr species" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266286.1" /db_xref="GI:15672112" /db_xref="GeneID:1113736" /translation="MAIFTGETVEDAIERGLNRLNVKRENVHIHIEQKEKKGFLGFGK KRARVNIEPIHEETVRKADHLAERGVDDTINLGVPKSQSAMEATLELSQVVKAVRAAE REQNGEITEEERNAIIEVAKKTVVQNRQGTADLSDVVSAVKEEVEAKKEVSNEDEKIA SKISSYLTTITQEMGIATRVSVSCDGNLTVFNLTSNHDALLIGKHGKILQSLQILAKA YANSILNTRMNIAVNVGDYHEKRKAYIVSLAHRAAERARGGETVYINDLQSNERKIVH TIIGQENGVSSHSEGQEYNRYIVVAKEI" gene 133788..133922 /gene="rpmH" /locus_tag="L133770" /db_xref="GeneID:1113737" CDS 133788..133922 /gene="rpmH" /locus_tag="L133770" /note="in Escherichia coli transcription of this gene is enhanced by polyamines" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L34" /protein_id="NP_266287.1" /db_xref="GI:15672113" /db_xref="GeneID:1113737" /translation="MKRTYQPHKKSRKTTHGFRSRMATKNGRRVLAARRRKGRASLTV" gene 134130..135041 /gene="ybdE" /locus_tag="L200008" /note="aldo/keto reductase family enzyme; may contain a frameshift mutation" /db_xref="GeneID:1113738" gene 135110..135430 /gene="ybdG" /locus_tag="L135065" /db_xref="GeneID:1113739" CDS 135110..135430 /gene="ybdG" /locus_tag="L135065" /note="belongs to the PBSX(XRE) family of transcription regulators" /codon_start=1 /transl_table=11 /product="transcription regulator" /protein_id="NP_266288.1" /db_xref="GI:15672114" /db_xref="GeneID:1113739" /translation="MDFSKYFKKKNDSKVKNFSKLEIFEKVNDEELIEVSGGNFSSNL RQKRAIAGLTQKELGKLLYSSKQAVCNWEHGRREPSLEVVQEMANVFKCSIDDLLKDS ENIN" gene 135561..135788 /gene="ybdH" /locus_tag="L135555" /db_xref="GeneID:1113740" CDS 135561..135788 /gene="ybdH" /locus_tag="L135555" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266289.1" /db_xref="GI:15672115" /db_xref="GeneID:1113740" /translation="MLKTSPERTRKCVFMELQTIFEEFEVLTDEELLEVSGGGVTGNH SLNSLLCDGGSGGGGGYDVVENYTNNFLKRG" gene 135966..136511 /gene="ybdI" /locus_tag="L135900" /db_xref="GeneID:1113741" CDS 135966..136511 /gene="ybdI" /locus_tag="L135900" /note="similar to OrfX from AbiG region of plasmid pCI750 from Lactococcus lactis subsp. cremoris UC653" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266290.1" /db_xref="GI:15672116" /db_xref="GeneID:1113741" /translation="MEAVHDFYPILFLVILFIVLYIAIKTGVFAHFKETFRLQNLLWL LGFVIVGYILGNIAHYLYLRFVPALDTIVENEATNNFVDSFLPTWFVYILMVVIAPIY EELMFREYFYRFFSHKWLAYILSILLFTLIHTRLTWSFFEYLPMSVIVTSTFHRYKRV SDSIIVHGGYNLMVLIFHIII" gene 136564..137244 /gene="ybdJ" /locus_tag="L136552" /db_xref="GeneID:1113742" CDS 136564..137244 /gene="ybdJ" /locus_tag="L136552" /note="similar to OrfX from AbiG region of plasmid pCI750 from Lactococcus lactis subsp. cremoris UC653" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266291.1" /db_xref="GI:15672117" /db_xref="GeneID:1113742" /translation="MIERIKKFLRTKFKPLLLLLVTVILYNGWTPHLGIFPPTFYDFA FNYYGFVDILTFLVIIVIAYKNDAFKKIFDIFRPKNLLFILFFIVGGNIFIALAHHLY FQMTPALEAFPEHSIDLANYFARTPFWTHSLDLFVIGPISEELIYREYLYRLFDKKCL ACFVSVTMFAWVHTGFTYSFFLYLPISLVVTLAYHRRKAIGESIALHSSINLINTYLP NLLSFWVF" gene 137413..137703 /gene="ybdK" /locus_tag="L137335" /db_xref="GeneID:1113743" CDS 137413..137703 /gene="ybdK" /locus_tag="L137335" /note="transposon related function" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266292.1" /db_xref="GI:15672118" /db_xref="GeneID:1113743" /translation="MARRKFDKQFKNSAVKLILEEGYSVKEVSQELEVHANSLYRWVQ EVEEYGESAFPGNGTALANAQHKIKLLEKENRYLQEELELLKKFRVFLKRSK" gene 137799..138560 /gene="tra904B" /locus_tag="L0458" /db_xref="GeneID:1113744" CDS 137799..138560 /gene="tra904B" /locus_tag="L0458" /experiment="experimental evidence, no additional details recorded" /note="evidence experimental PMID:1328163; transposon related function; IS3/IS150/IS904 family transposase" /codon_start=1 /transl_table=11 /product="transposase of IS904B" /protein_id="NP_266293.1" /db_xref="GI:15672119" /db_xref="GeneID:1113744" /translation="MHRRPSKQQVEREILSEKIKAVFHEHKGRYGAVRITKVLHNTGI MTNTKRVGKLMHLMGLYAKGSRYKYKHYNRKGASLSRPNLINQIFKATAPNKVWLGDM TYIPTKEGTLYLAVNIDVFSRKIVGWSMSSRMQDKLVRDCFLQACGKEHPQPGLIVHT DQGSQYTSSRYQSTLRQVGAQSSMSRKGNPYDNAMMESFYKTLKRELINDAHFETRAE ATQEIFKYIETYYNTKRMHSGLDYKSPKDFEKYNS" gene 138617..139174 /gene="ybdL" /locus_tag="L425" /db_xref="GeneID:1113745" CDS 138617..139174 /gene="ybdL" /locus_tag="L425" /note="transposon related function" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266294.1" /db_xref="GI:15672120" /db_xref="GeneID:1113745" /translation="MVKYSIELKQRIIQDYLSGKGGSTYLAKLHNVGSSSQVRHWIRN YRAEGLPTAHSKVNKNYSMELKENAVQCYLTTDLTYEAVARKFEITNFTLLASWVNHF KIYGEVPISKKRGRRKKLESIASSMTQNPNDSQRIKELEQELRYAQIEVAYLKGLRRL EKNALMNKNQDSSTVSVKPSNSKKS" gene 139171..139989 /gene="tra1077B" /locus_tag="L0467" /db_xref="GeneID:1113746" CDS 139171..139989 /gene="tra1077B" /locus_tag="L0467" /experiment="experimental evidence, no additional details recorded" /note="evidence experimental PMID:1328163; transposon related function; IS3/IS150/IS904 family transposase" /codon_start=1 /transl_table=11 /product="IS1077B transposase" /protein_id="NP_266295.1" /db_xref="GI:15672121" /db_xref="GeneID:1113746" /translation="MKVTGFPKATYYYWVNCFERVNKDELIEKEMLKIRQEHANAGYR PMSELLKQRGYHVNHKKVQRLMKKLGLRVTSYWHKLRNHNSYKGKVGTVAKNKLHRRF RTSIPHQKITTDTTEFKYYEDGIQKKCYLNPYIDLFNSEVISYHISKHPSYQSIDIAL NQALAVTSDCPYRRTFHSDQGWGYQMRDYVSKLKSHRIFQSMSRKGKCHDNSVMENFF GLLKQEIYYGHIFSSFEELEQVIVIWIRYYNTKRIKQKLNWMSPIQFRLNYQNN" gene complement(140045..140806) /gene="tra904C" /locus_tag="L0459" /db_xref="GeneID:1113747" CDS complement(140045..140806) /gene="tra904C" /locus_tag="L0459" /experiment="experimental evidence, no additional details recorded" /note="evidence experimental PMID:1328163; transposon related function; IS3/IS150/IS904 family transposase" /codon_start=1 /transl_table=11 /product="transposase of IS904C" /protein_id="NP_266296.1" /db_xref="GI:15672122" /db_xref="GeneID:1113747" /translation="MHRRPSKQQVEREILSEKIKAVFHEHKGRYGAVRITKVLHNTGI MTNTKRVGKLMHLMGLYAKGSRYKYKHYNRKGASLSRPNLINQIFKATAPNKVWLGDM TYIPTKEGTLYLAVNIDVFSRKIVGWSMSSRMQDKLVRDCFLQACGKEHPQPGLIVHT DQGSQYTSSRYQSTLRQVGAQSSMSRKGNPYDNAMMESFYKTLKRELINDAHFETRAE ATQEIFKYIETYYNTKRMHSGLDYKSPKDFEKYNS" gene complement(140902..141192) /gene="ybeG" /locus_tag="L140905" /db_xref="GeneID:1113748" CDS complement(140902..141192) /gene="ybeG" /locus_tag="L140905" /note="transposon related function" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266297.1" /db_xref="GI:15672123" /db_xref="GeneID:1113748" /translation="MARRKFDKQFKNSAVKLILEEGYSVKEVSQELEVHANSLYRWVQ EVEEYGESAFPGNGTALANAQHKIKLLEKENRYLQEELELLKKFRVFLKRSK" gene 141497..141763 /gene="ybeA" /locus_tag="L141485" /db_xref="GeneID:1113749" CDS 141497..141763 /gene="ybeA" /locus_tag="L141485" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266298.1" /db_xref="GI:15672124" /db_xref="GeneID:1113749" /translation="MSFTDETVRFEFGDSDKKEIGETLVDVYNVLEAKGYNPINQIVG YVLSGDPAYIPRHDDARNKIRRFDRDDIVEELIKNYLKDNGVNL" gene 141835..142194 /gene="ybeB" /locus_tag="L141748" /db_xref="GeneID:1113750" CDS 141835..142194 /gene="ybeB" /locus_tag="L141748" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266299.1" /db_xref="GI:15672125" /db_xref="GeneID:1113750" /translation="MTAQPVETIKIDSEAGELGFERLGVLIKEYKPEKVVLGLPKHMN GDEGIRAEASRDYGTKLANEFGLEVAYQDERLTTAQAEKVLIDGGVRRKERKKSIDKL AAVLILQNYLDAHALKL" gene 142347..142670 /gene="ybeC" /locus_tag="L142332" /db_xref="GeneID:1113751" CDS 142347..142670 /gene="ybeC" /locus_tag="L142332" /note="similar to YrzB of Bacillus subtilis" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266300.1" /db_xref="GI:15672126" /db_xref="GeneID:1113751" /translation="MTHTHDHEHDHNHEPDYITLVDENGNESLFQILITIDGQEEFGK NYVVLQPTEFEEDEQGLIDVLAYSFTENADGTEGDLQPIPEDAEDEWDMIEEVFNSFM DEQED" gene complement(142701..143252) /gene="ybeH" /locus_tag="L142704" /db_xref="GeneID:1113752" CDS complement(142701..143252) /gene="ybeH" /locus_tag="L142704" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266301.1" /db_xref="GI:15672127" /db_xref="GeneID:1113752" /translation="MEKERFLAFTDAIIAIIATIMVLEFKTPDKSGWPALAELTIPLL AYALSFFMIMTVWYNHHQLYRDIKNITPRIFLLNTLWLFIMSFFPFTTGWVGKHASEF LPEFFYLIVIFLWAAVFHLMDHELLKENPDKEYKELTHSLSGRNLFLINFLSIVIVWF WPPIGLVCVAMLATISLISFLKK" gene complement(143347..144132) /gene="cbr" /locus_tag="L143350" /db_xref="GeneID:1113753" CDS complement(143347..144132) /gene="cbr" /locus_tag="L143350" /note="aerobic energy metabolism; short-chain dehydrogenases/reductases family" /codon_start=1 /transl_table=11 /product="carbonyl reductase" /protein_id="NP_266302.1" /db_xref="GI:15672128" /db_xref="GeneID:1113753" /translation="MKTLITGENKGIGFALAQNLGHRGYEVLVGARNETRGQEAVEKL KAEGITAKFVKVDLDDLNQLTSLSALTDIDLLINNAGISGNIHSDKGHLDMEKSAFDY STTDLEETIKTNFLGTHAVIKELLPHSLTENAKIINITVPVSQEYWMPLAYVTSKAAQ NAMTFAFGHQFKKDKSKKQIFAVMPGAVATDLNGAKVGDSPFVKSPEETAQMISKFIF DDKNHNAQIINFDGTIYDNYEPGLRNKVIKDVAKNGLKRKFKK" gene complement(144152..144397) /gene="ybeI" /locus_tag="L144155" /db_xref="GeneID:1113754" CDS complement(144152..144397) /gene="ybeI" /locus_tag="L144155" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266303.1" /db_xref="GI:15672129" /db_xref="GeneID:1113754" /translation="MSLNPLQMHNTKKELRKNFELTRLSKSEVATDLKISEVKLEKIE KTGQQPVPFTALSGDWHRHWFLNSNLIDQQQMSKGDN" gene complement(144407..145192) /gene="dltE" /locus_tag="L144410" /db_xref="GeneID:1113755" CDS complement(144407..145192) /gene="dltE" /locus_tag="L144410" /function="biosynthesis of D-alanyl-lipoteichoic acid" /note="surface polysaccharides, lipopolysaccharides and antigens; short-chain dehydrogenase/reductase family" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_266304.1" /db_xref="GI:15672130" /db_xref="GeneID:1113755" /translation="MTFTGHTILITGGTSGIGLGFAKKFSELGNKVIITARNEKRLNQ ILNENLTFTGFVSDVADKDSLPQLVNFIKENFPQLDVIMNCAGIMRAINLFEQADNSL KVLTEEIHINLLGTIAVTQAFLKILVANNGLVINVSSGLSNLADGAHPIYNLTKAGVH FYSDALREQAKYFEKTLKVIELVPPLVTETNLESHTNTDAPNNMALSDLISETLAGLE NGLDRIDAGFAKQLHQMGKVNSDENTKLLSQQMLSNYFPKMKD" gene 145304..145849 /gene="ybeD" /locus_tag="L145301" /db_xref="GeneID:1113756" CDS 145304..145849 /gene="ybeD" /locus_tag="L145301" /note="TetR/AcrR family of transcription regulators" /codon_start=1 /transl_table=11 /product="transcription regulator" /protein_id="NP_266305.1" /db_xref="GI:15672131" /db_xref="GeneID:1113756" /translation="MNTREKILGKTEEFILENGIEKLTISKIAKELNISQPAIYKHFK SKDELLTILALRWLNGQTLVKIFPFDTSKYEHQKEIVHDWLWSVAIAKYEAHRKTPEM FALYTTYIGENLELGRKHILEMVESLKTAAKFESEEEAAAYIQAFVYFHHPKIAPQWD DQFQNQFENLWTLLEPNLNAF" gene 147277 /gene="glgB" /locus_tag="L200009" /note="branching enzyme; central intermediary metabolism; third step in starch biosynthesis; may contain a frameshift mutation" /db_xref="GeneID:1113757" gene complement(148003..148323) /gene="ybeM" /locus_tag="L148007" /db_xref="GeneID:1113758" CDS complement(148003..148323) /gene="ybeM" /locus_tag="L148007" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266306.1" /db_xref="GI:15672132" /db_xref="GeneID:1113758" /translation="MDYNDFMKSKHIAERWGELQANYKNLNKTSELKAYHDLLTEFYD YIQSLEAHFFNDEKVADQKNLLTENVATPSQIFNAPKIPETLSFGQEALKGEEDPWFG FNDE" gene 148795..154746 /gene="ybeF" /locus_tag="L148778" /db_xref="GeneID:1113759" CDS 148795..154746 /gene="ybeF" /locus_tag="L148778" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266307.1" /db_xref="GI:15672133" /db_xref="GeneID:1113759" /translation="MKSRKKVISIILGLMLLLQYVITPVGAIAGAINEETNDSDITLS QFKIDESESNADLMTFDLSLKINQSILKSKTTIIELDKSIKINEPNEANRQKSTASYT ADENRLTIDLNSLNTGEVKVNFSISKELLKNFERLTAKLNDSQVDVLLPKTSSTSETP SQSTSTVTQNTVTPEIKEKESSTTKHSEQAIKTVESQDIRKLLEDSGISPATIIDSAK VIYLDKEGKPYPDQTDVPIDAEVQIDYTWSIPEDILPLKSGDYFDFKLPDGVTIEQAT SSLGDYGTYTINADGTVRFVFNEKVETYHDIKGTFHYDAHFDKTIVPGEVVVDTPTEE NFPPSEIHVRPTYDQAIDKSGHFDKTPNPSEVIWEININRPLNTMENATLTDPMPEGT TYESVEIYPETVGKNGEIISIDKEHPLVKGTDYTVDSNGKITFIGKYATTDQAFNVVY TTTIDESSFPEKEGAVSFKNTATLNDGKTDTNESASVTAQYKGPIKKNGPFTTGNDQI YNWNIEYNYNEKNHKAGSFIEDTMSDAIELVNGSVKLYKITFDSNGKEIKGAQLKEGE DYKLVQDPDNPQKFKIEFITDIDYAVKVEYQTKVKDIVDGNVTIDNSVTTDTGDNSES GGNATQQGIVKNIDGDIDYENREIPWKIDINSPGYWMENWSLEDKMSEGLTFLENTFQ IIDKTAGNKVLSPTEYTLIKTTAGFSVSFNSPLKEGTDHKYQIKYKTKFDTSVIDNGS GHEGDIKFVNDASMTWKDKNGGDHTNNDHKEFKPIPPFQYNGQKSGSYNATSKKITWT IAANFNQQELSNASITDPISDDQNYVSGSAKVYEATINKNGTYTLGAEVTSDMGIKIV ESKGSVKVELPDGSTKAYVLIFETSLEGNLINQKEYKNKATFTNKDISHDLSASVTPA HQGEFVTKDGSQSSTDSNYVNWKLTVNASQSTLKNVEVTDNPSSNQYIVAKDILIYGT SIDASGNITENKNIILEQGKDYSVDIQTDNSTGAQTVKIKFLSEINTAYVVEYRALIT SDKANDVVTNQAHITGDNEKIIEQDVEKDVPVTNHNGSANGSKGSVTLEKVGPGKAKL AGAHLQLWSIGTDGKKDKLIREGDTDKNGDLKLGNLRVTDYLLIETKAPTGYTLDEEL VKGKKITVAKDGEVSNFPIQDVENEPTKVILKKVGLTIENGKEVKNPLQGAEFKVLDS NGQVVSGYEKLTSDSSGNVTIEKLTPGKYSLVETKAPAGYILDPTPIDFELKANEEGI IPDINLEKVNYQGSAQLIKHNSNGQALSGAIFKVIDKDGNTIQTNLSSDKDGKVTATG LSPGDYSFVETKAPTGYILNTIPVHFTISAEEEGQPQMVIASDNFINYQGSAELIKQD NEGQPLSGAVFKIVDKAGKTIQANLTSGKDGKVVVDGLAPGEYSFVETKAPTGYILNT NPVHFTISDKEEGQPKTIIASDSFVNYQGSAQLIKRDSQGQPLLGAIFKVVDNTGKLV KEGLTSDKAGKVNVTGLAPGDYSFIETQAPTGYILNTIPTPFTILAESEGQPQLVVAS DNFINYQGSAELIKHDINGQALSGAIFKVIDADGKTIKEGLTSDETGKVLIEGLVPGD YSFVETKAPEGYILNTLPVNFSISGEEEGKVKVVMASDNFINYQGSAELIKHDSQGQA LEGAIFKVVDSKGKIIKEDLASDKTGKVLIDNLAPGDYSFVETKAPSGYILNTSKVDF TISTKEEGQPKVVMASDNFINYQGSAELIKHDSQGQALEGAVFKVIDSKGKSIKENLV SDKEGKVLIENLVPGDYSFVETKPPSSYILNTSKVDFTISTKEENKPKIVMASENFIN YQGSAELIKVDENGKSLSGAVFNVTNSETHEVVIKGIKTDANGVIKANHLKPGKYTFV ETEAPAGYQLSQETRAFEIKASAENKPQVVNTGKFVNKRLPITPKKPELPKTGEERNT FLPIVGVGLLMVGATLYVFFKRRKM" gene complement(155240..155312) /locus_tag="L200139" /db_xref="GeneID:1113596" tRNA complement(155240..155312) /locus_tag="L200139" /product="tRNA-Thr" /db_xref="GeneID:1113596" gene complement(155375..156523) /gene="tgt" /locus_tag="L0361" /db_xref="GeneID:1113760" CDS complement(155375..156523) /gene="tgt" /locus_tag="L0361" /EC_number="2.4.2.29" /note="Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr)" /codon_start=1 /transl_table=11 /product="queuine tRNA-ribosyltransferase" /protein_id="NP_266308.1" /db_xref="GI:15672134" /db_xref="GeneID:1113760" /translation="MTEHAIKYRLIKKEKHTGARLGEIITPHGTFPTPMFMPVGTQAT VKTMSPEELKTLGSGIILSNTYHLWLRPGDELVAEAGGLHKFMNWDQPILTDSGGFQV YSLVQNKKNITEEGVKFKSHLDGRELFLNPEKAISIQNNLGSDIMMSFDECPPFYQPY DYVKASVERTSRWAERGLNAHRRPNDQGLFGIVQGAGFEDLRRQSARDLTSMDFAGYS IGGLAVGESHKEMNAVLDFTTPMLPEDKPRYLMGVGAPDSLIDGVIRGVDMFDCVLPT RIARNGTLMTHFGRVNIRNAKYEHDFTPLDPMCDCYTCTNYTRAYLRHLIKADETFGL RLCSYHNLHFLVNLMKDVRGAIMDDNLLEFREDFCERYGYNQPNAKDF" gene 156715..157407 /gene="ybfA" /locus_tag="L156674" /db_xref="GeneID:1113761" CDS 156715..157407 /gene="ybfA" /locus_tag="L156674" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266309.1" /db_xref="GI:15672135" /db_xref="GeneID:1113761" /translation="MSRWELKNQAKGALKDNFGSKMLLFIIPIIAGILGGGNGVKQSM DYNTSNFDSIPGSVWMVISFATLLIAILMIVVALFVSVVTVGAIFNYIKIFRGERNNP QFKNVFGPFYDGSAGKIILLSIVKGVIFVALMFIPVIGWAFAIYLGLGWSQATYVLFD QLEEGRYSGVMSVLSESATMMKGLRGNYFIFKLSFFWWYVLYGISGGLAGFWTTPYLN MASIAYYENIGK" gene complement(157468..158649) /gene="ybfD" /locus_tag="L157472" /db_xref="GeneID:1113762" CDS complement(157468..158649) /gene="ybfD" /locus_tag="L157472" /note="transport and binding protein; multidrug resistance; similar to several quinolene resistance proteins NorA" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="NP_266310.1" /db_xref="GI:15672136" /db_xref="GeneID:1113762" /translation="MKEKLWTTTFVVNMLLNFIFYLVFYLPTVVIGTMAMERYHASAS IAGILSGIFIVGGFIARLWAGNNMKRLGAKKLLYIGTLIYFLLTFAYFFVHSVVLLLI LRLVHGLGFGIAATASGTLAGAIVPSSRRGEGIGYYALSVTLSSAVGPFLSMFLYRTS GFYSLIWLSALLLFIALVGIFFIHVEKTTDSSNSVDNKVHKKFAWSNYFEKEALPISL IAFLIGISYSSILSFMDAYARNIHLSEAASFFFLVYAITVLLSRPITGRVFDGFGDNF VMYPTYLFFALGLLLIGFAHSGWMLLLAAIFIGLGYGSFSPFGQAIAIRNSEAHRLGI TTSTFFGFMDMGVGFGPFILGMFMPLLGYRNLYFASAILALLIAVIYHFVHGRHAKRE N" gene complement(158830..159267) /gene="ybfE" /locus_tag="L158834" /db_xref="GeneID:1113763" CDS complement(158830..159267) /gene="ybfE" /locus_tag="L158834" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266311.1" /db_xref="GI:15672137" /db_xref="GeneID:1113763" /translation="MYEFENPEQEVMFDYLKNAKIIAVVGISDKTDRSSFLIAQGLQQ NGYHVIPVNPRLAGRELLGEKVYASIKEVPFHIDIVDIFRRSEFLADVARDFIETDAD IFWAQLGLQSQEAEQILREAGRNKIVMNRCIKIEYAYSGLGKK" gene 159402..160193 /gene="ybfB" /locus_tag="L159400" /db_xref="GeneID:1113764" CDS 159402..160193 /gene="ybfB" /locus_tag="L159400" /note="similar to streptodornase (DNAse) from Streptococcus pyogenes" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266312.1" /db_xref="GI:15672138" /db_xref="GeneID:1113764" /translation="MNKKQIKTLTSVIVVIIALAVGYFGSGRLHLGQGNNSATDNSSQ VSTKSLASSVKQAPLTFKNQRQMVMANTDALGRAVDSHIQLKDSQEPKVKREPLTYNP VGWHNYNFYYKKSDGSIGKMWLMARGHLVGYQFSGLNNEARNLVPETAWFNGGNFTGT NDGNTASMLYYENRLDSWLANHPNYYLDYQVTPLYEGNELLPRQIRLAYVGIDKNGQT LSIKLGGGREKSGNGGATVVVLDNVAPNAKINYADGTAVNTVSPK" gene 160358..160567 /gene="ybfC" /locus_tag="L160332" /db_xref="GeneID:1113765" CDS 160358..160567 /gene="ybfC" /locus_tag="L160332" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266313.1" /db_xref="GI:15672139" /db_xref="GeneID:1113765" /translation="MFLLLILFLAMLLFIKGFFKIVLPALIILMILKFLFGGLMLLLS PHFWGTLLVISIIVWLVRASRSRYY" gene 160579..160818 /gene="ybgA" /locus_tag="L160556" /db_xref="GeneID:1113766" CDS 160579..160818 /gene="ybgA" /locus_tag="L160556" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266314.1" /db_xref="GI:15672140" /db_xref="GeneID:1113766" /translation="MFVGFLSGLIVMGALLSILLVLLGVMALRVFVRYILPILLILLI IRLIISGIVLLFNPHFWLFIAVVALVLWILGKIRN" gene 161014..162597 /gene="ybgB" /locus_tag="L160937" /db_xref="GeneID:1113767" CDS 161014..162597 /gene="ybgB" /locus_tag="L160937" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266315.1" /db_xref="GI:15672141" /db_xref="GeneID:1113767" /translation="MSNEYRSRSSRRERRSSRWANKDSDVVEAAANQANRHLEEEPEG QNVERTSRQKLTHEKTLRIPLAVYGLLTGLSVLLALSFYAFPLWKPVATASQSQNLYS GFAMHHGLVPFNDFYGTGGTVFYLINWLGNIGGTTWLLWLFEIIALLISGILVYRLVG QQTKNQTASLTVSVFTLVIIAGLARGGDSPTLFALPFALWAARFLSSYFQDSSTDRGF IRFGMAAAFALVISPVMSVFFILSAIALIIHNVGSRKIGRGFYQMLATILGVLLVGYS VAYYSLEEQTIYTSIEQSILIPFTHFGPSGDLLLTLAKALVLTLIFGIVAGFVQGIVQ LKKGGPARVWYVMMLIGIVGLTTMIVFAQTFDSSNLLAVLPFTIVFAGLGLTDSDQIL LKYLQNRLFAPILAILFVVFTPISYHFMNRTIASEEQSVAQYIKANATGSDRVYVVAD GKNINNLTKTISTLDNVPANYPIKFTQSYDLKVGKLSDKFVVLQASEKAPTSLKKVLD KDYKVTNYAGKYFQVYKKK" gene 162666..163880 /gene="aspC" /locus_tag="L162604" /db_xref="GeneID:1113768" CDS 162666..163880 /gene="aspC" /locus_tag="L162604" /EC_number="2.6.1.2" /function="amino-acid biosynthesis" /note="broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor" /codon_start=1 /transl_table=11 /product="aminotransferase AlaT" /protein_id="NP_266316.1" /db_xref="GI:15672142" /db_xref="GeneID:1113768" /translation="MRKFEKSHKLDNVSYDIRGPVLDEAQRMRANGEKILRLNTGNPA EFGFLAPDEVISDLIQHAVDSEGYSDSKGIFSARKAIMQYCQLKGFPNLDINDIFTGN GVSELIVMAMQGLLDTGDEVLIPMPDYPLWTASVSLAGGTAVHYLCDEQAGWFPDIDD IRSKITSNTKAIVLINPNNPTGALYSKDLLLEIVQVARENNLIIFSDEIYDRLVMDGA VHVPIASLAPDLFVVTMNGLSKSHRIAGFRVGWMVLSGEKSHVKGYIEGLNMLASMRL CSNVLAQSVVQTSLGGTQSVDKLLLPGGRVYEQREFIYKAINDIPGLSAVKPQAAFYI FPKIDREMYKIDNDEQFVLDFLKQEKILLVHGRGFNWKEPDHFRIVYLPRVDELAEIQ EKMERFLWQYRK" gene 164033..164821 /gene="codY" /locus_tag="L0243" /db_xref="GeneID:1113769" CDS 164033..164821 /gene="codY" /locus_tag="L0243" /note="CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase (By similarity). It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor" /codon_start=1 /transl_table=11 /product="transcriptional repressor CodY" /protein_id="NP_266317.1" /db_xref="GI:15672143" /db_xref="GeneID:1113769" /translation="MATLLEKTRKITAILQDGVTDLQQELPYNSMTERLANVIDCNAC VINTKGELLGYSLPYNTNNDRVDQFFYDRKLPDEYVRAAVRIYDTMANVPVDRPLAIF PEESLGDFPKGVTTLAPIYGSGMRLGTFIMWREDGEFTDDDLVLVELATTVIGVQLSN LKLEQMEENIRKDTMATMAVNTLSYSEMKAVKAIIEELDGEEGHVIASVIADKIGITR SVIVNALRKLESAGVIESRSLGMKGTYLKVLNTGLFDKLAGRNF" gene 165330..165635 /gene="gatC" /locus_tag="L0475" /db_xref="GeneID:1113770" CDS 165330..165635 /gene="gatC" /locus_tag="L0475" /note="allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain" /codon_start=1 /transl_table=11 /product="aspartyl/glutamyl-tRNA amidotransferase subunit C" /protein_id="NP_266318.1" /db_xref="GI:15672144" /db_xref="GeneID:1113770" /translation="MSQITEEQVKHVALLSKLEFSENEVKSFTDTFGKIIDMVEMLDE VDGEGVPFTMNVADNLNFMREDVAEKGLDREKLMAAVPEKEDGFIKVPAMLSDGGDA" gene 165635..167095 /gene="gatA" /locus_tag="L0473" /db_xref="GeneID:1113771" CDS 165635..167095 /gene="gatA" /locus_tag="L0473" /note="allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA" /codon_start=1 /transl_table=11 /product="aspartyl/glutamyl-tRNA amidotransferase subunit A" /protein_id="NP_266319.1" /db_xref="GI:15672145" /db_xref="GeneID:1113771" /translation="MSYNNKSIKELHELLVNKEISALELTKATLSDISAREPQIDAFL KITEEKALQDAAAIDARGINPDVVTDGISIAVKDNIVTEGIETTAASKILGGWIPPYN ATVANKLSESGLITIGKLNMDEFAMGGSGENSSVKPTKNAWDQTKVPGGSSSGSAASV ASGQVRLSLGSDTGGSIRQPAAFNGIVGLKPTYGRVSRFGLIAFASSLDQIGPLAPTV EENAQLLNVISGFDKNDSTSSNVAVPDFTSKIGQDIKGMKIALPKEYFGEGIDEKVKE QILAAAKHLEKLGAIVEEVSLPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAQDI KNLEDLYVKSRSEGFGPEVQRRIMLGTFSLSAGSYDKHFKKAGQVRTLIINDFAKVFE KYDLILGPTTPTPAWDLGARVDDPLSMYLADLLTIPVNLAGLPGISIPAGFADGLPVG MQLIGKRYDEETIYKVAAAFEATTDFHKKQPIIFGK" gene 167099..167701 /gene="ybgD" /locus_tag="L167097" /db_xref="GeneID:1113772" CDS 167099..167701 /gene="ybgD" /locus_tag="L167097" /note="similar to several MutT-like proteins" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266320.1" /db_xref="GI:15672146" /db_xref="GeneID:1113772" /translation="MEFDELIKRLNAVADAGLFYGKDVFDIERYHEIKAILPQLLKHS TTLTKEELTDLFRPNNSYPTPMIDVRAFIQNEEKEILFVRDKMQGDWALPGGYGEIGF TPSENLLKELKEEAGVSGEIERLLAIFDTDKCQPQGKQYYKFVFKCKALSIDFLENSE TSETKFIKRSELTNLSVKRTTMSQLSLLEKLSKTGKQYID" gene 167741..169174 /gene="gatB" /locus_tag="L0474" /db_xref="GeneID:1113773" CDS 167741..169174 /gene="gatB" /locus_tag="L0474" /note="allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA" /codon_start=1 /transl_table=11 /product="aspartyl/glutamyl-tRNA amidotransferase subunit B" /protein_id="NP_266321.2" /db_xref="GI:30023976" /db_xref="GeneID:1113773" /translation="MNFETVIGLEVHVELSTNSKIFSPASTKFGGDPNTNTNVIDWSL PGVLPVMNKGVIDSGIKAALALNMDIHKSMHFDRKNYFYPDNPKAYQISQFDEPIGYN GSIEIELEDGHKATIRIERAHLEEDAGKNTHGTDGYSYVDLNRQGVPLIEIVSEADMR TPEEAYAYLTALKEAILYTGISDVKMEEGSMRCDANVSLRPYGQEAFGVKTEVKNMNS FSNVKKALDFEVDRQAKILRAGGEIRQETRRFNDKTGETILMRVKEGASDYRYFPEPD VPRFEISEEWVEQMRESLPMTAKARRAHYINDLALSDYDARQLTATKEVSDFFDQAIK FDTDPKLVSNWLQGEVAQYLNSEKKELHEIGLTPENLTEMIRLISDGTISSKIAKKVF IELAKNGGSAEEFVKKAGLVQISDPAVLLPIIHDVFAKNEQSVADYRGGKQNAAKALV GQLMKATKGQANPTVAQKLLYQELDNF" gene 169398..170897 /gene="ybgE" /locus_tag="L169390" /db_xref="GeneID:1113774" CDS 169398..170897 /gene="ybgE" /locus_tag="L169390" /note="similar to 6-aminohexanoate-cyclic-dimer hydrolase of Flavobacterium sp." /codon_start=1 /transl_table=11 /product="amidase" /protein_id="NP_266322.1" /db_xref="GI:15672148" /db_xref="GeneID:1113774" /translation="MLEIKDATYWAEQLKSGNLSAKALLEMTNDKIQKLNPRYNAIVA YDLEKAKADLALTSQGFFAGLPFALKMLGQTHKGLPDTASSHLFSENVASEDDNYVKG LLEAGFTPFGQTNSPEFGFKNISDSKLYGDTRNVWNEAYYSGGSSGGAASAVVSGMFA IAGASDGGGSIRIPASFSGLIGLKMTRGRMPQGPDSYRGWQGASISGALTVSVRDTAR FVLEMQTLQEAAPYQAKLLDEKELIALTKSTGQAVSNNLSRKIKIAYSLQSPISGIEL SKDAINACLKAVEFLERQGHELTEVDFPIEARPLIQSYYRMNAAEIVAMLEPWERAAG RKLTSQDVELLTYALLEAGRKAPVSSYINALAQWDLAARDFTDKIYKDYDLFLTATTA KTAPKIGQELMTAEVLKEMSEISQYEFEQQIEIIEAAFERSLAFTPYNFISNLTGQPA LSLPVYVNEETNLPLGIQLWGPKNSEIELLKVAKEFEEAGQFILPKAYQ" gene complement(170979..172319) /gene="dinF" /locus_tag="L170983" /db_xref="GeneID:1113775" CDS complement(170979..172319) /gene="dinF" /locus_tag="L170983" /note="damage-inducible protein; adaptations and atypical conditions; similar to DinF protein from Streptococcus pneumoniae" /codon_start=1 /transl_table=11 /product="DinF" /protein_id="NP_266323.1" /db_xref="GI:15672149" /db_xref="GeneID:1113775" /translation="MKDLTKGNILTGLIAFTLPLLMGNFFQVLYNTADTLIVGQTLGK DALASVGATGSINFLIVGFAQGMTAGLTILTAQRFGAKDELAIKKSYVTGLYFTIAIS ILLSILSLIFVGPLLQVMQTPSQIFEGAKTFLSIMLGGMIATNLYAYLSNALRALGDS KTPLYALIAASILNIAFEYFAILVLKLGIAGASGATILAQMISVLFLFWHIKRKVPEF QISKNLWRLDRAEIVHHARLGIPMGFQSSIIAIGSITLQVALNKMGTNAVATQAIVSK IDQFAMLPMISIGLAMATFGAQNYGAKQYKRINQGLTRALTIAVGWSIIFAIILNLAH FYFTTAFISSSQTAVIEMSSHYYLVNGSFYWLLAILFVTRSTIQGLGNAKIPTLCGFA ELFMRAGVAIIGVLLLNYTVIISSNPAAWLGSTSILIPTTIRMIKRFRQNQDLA" gene complement(172501..172698) /gene="cspE" /locus_tag="L172505" /db_xref="GeneID:1113776" CDS complement(172501..172698) /gene="cspE" /locus_tag="L172505" /note="adaptations and atypical conditions; cold-shock (CSD) family" /codon_start=1 /transl_table=11 /product="cold shock protein E" /protein_id="NP_266324.1" /db_xref="GI:15672150" /db_xref="GeneID:1113776" /translation="MAQGTVKWFNATKGFGFITTEEGNDVFAHFSAIQTDGFKTLDEG QKVTFDVEDGPRGPQAVNIQK" gene 172816..173349 /gene="ybhA" /locus_tag="L172782" /db_xref="GeneID:1113777" CDS 172816..173349 /gene="ybhA" /locus_tag="L172782" /note="similar to 5-formyltetrahydrofolate cyclo-ligase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266325.1" /db_xref="GI:15672151" /db_xref="GeneID:1113777" /translation="MESKAENRKKILQMLKNFSDYEKRRQNKDVLKQLTASSKWKSAK KIALYMSMPIEFNLTELFDQSDDKEILIPKCLPERQMIFAKYDKENLVRSKFGLLEPK SEIAVEPDFILVPGLIWNDEGYRIGFGGGYYDRYLANFEGSTASVLYDFQKMDFEAES HDIAVQELFIGRKNNEF" gene 173339..174031 /gene="ybhB" /locus_tag="L173329" /db_xref="GeneID:1113778" CDS 173339..174031 /gene="ybhB" /locus_tag="L173329" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266326.1" /db_xref="GI:15672152" /db_xref="GeneID:1113778" /translation="MNFNEIKRDFTRYKATYILSIITLLVWLWQFFTYGISATSAINL FNSGAILGQVMLFDPSQMWRLFTALFIHIGWAHVLLNVATLFFIGRQIENVFGWLRFT LIYLLSGIFGNAMVFLLTPRVVSAGASTSIFGLFAAVVGLAFFTKHPFLQQIGRMFTV LIVANLVMNLFSLGNVSIWAHIGGAIGGLLLSAIFAPKAFIPSIPKQYRIFATGAFVI LLVLFIGLPFFK" gene 174131..174562 /gene="ybhC" /locus_tag="L174251" /db_xref="GeneID:1113779" CDS 174131..174562 /gene="ybhC" /locus_tag="L174251" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266327.1" /db_xref="GI:15672153" /db_xref="GeneID:1113779" /translation="MRIDKIVDAPREFIFEKIIDSCLFDIEKNTGKRPKVRSLNGYEY SKSFGKNQRGSIKITELTEPSIYAFTTKTNRNTFSTRWELHKIDDRSTQVVIEEHQTS NGFIQMINDKAVGFFLGRFKKRQMVAVLDNVNRAYNGGRAR" gene 174953..176005 /gene="ybhD" /locus_tag="L174946" /db_xref="GeneID:1113780" CDS 174953..176005 /gene="ybhD" /locus_tag="L174946" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266328.1" /db_xref="GI:15672154" /db_xref="GeneID:1113780" /translation="MNANTKNNKEFLDLATYAFHKPKTKERAKAFDKLLEFSTPYGHY ENQKLTSMVIDSHFNVYWKNQEVKTSGIGYVASYPQFRGNGAIRQLMTKSLRDNYEKG VIFSYLAPFSYAFYEKFGYHYAFNQKHYRLAAQDFPKGKRSAGEISREKFEFDDENAS EFSISKNTALFKVLTEVHQKADNQGSLIRSPELWSYFFSFKSQPHCAIYRENGKALGY LLYEFSEMTFVIKELITLTDEAKQAFYRFISSHAGSFSEISWQAPSDILLEEELTEPQ RAEIKLVPYMQARIVNLQEFLKVHGQPDFSVEITDEIIPENNISLGEGKREKMTIGQF TAKILKENQAILREYF" gene 176338..177432 /gene="ybhE" /locus_tag="L176316" /db_xref="GeneID:1113781" CDS 176338..177432 /gene="ybhE" /locus_tag="L176316" /note="similar to outer surface protein of Borrelia burgdorferi" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266329.1" /db_xref="GI:15672155" /db_xref="GeneID:1113781" /translation="MGKLGVSIYPERSNFEADKAYLDLAHQYGFKRVFTSLLEIDGDK EGVLAAFKKVVDYANQLGMEVMVDINPGLFTQLNISYDDLSFFHEMGADGVRLDIGFT GAEEARMTRNPYGIKIEINMSQGTTYVDSIMDYSPDTEKLLGSHNFYPHRYTGLEFNH YLKCTEKFKGYNLNTMAFVNSQAATFGPWPTQDGLCTLEDHRSLEIATQVKHYKLLGG IDDVTIANAYASEEELKAMSQAFNASMPEIKVVPRETISENERKCLFEATHSYRGDKS AYMLRSTMTRITYKDLEFPAHDTDKIQRGDVIIDNEGYGQYKGETQIALREMENDGRV NVVGRIADDELFLLDFLKPWSSFKLIESKK" gene 177530..179014 /gene="celB" /locus_tag="L177520" /db_xref="GeneID:1113782" CDS 177530..179014 /gene="celB" /locus_tag="L177520" /EC_number="2.7.1.69" /note="transport and binding protein; PTS system" /codon_start=1 /transl_table=11 /product="cellobiose-specific PTS system IIC component" /protein_id="NP_266330.1" /db_xref="GI:15672156" /db_xref="GeneID:1113782" /translation="MNGITAWMEKYLVPVAAKIGSQKHLVALRDSFIGMLPATLAGAL AAMISAIVTTFPSAIQQMMLGATAFSKLAPEKVWTLANTPIIGDLNNISALVNQGTLT VIGLIFAFSWGYNLARAYGVNDLAGGIVSLATLFAGLPNQMGKFTAALGTGKAGVAAT DKLNGVLGDQGLAAWKPLFASAHLDAGAYFTVIIMGALAVIIYAKLMLADITIKMPES VPPAVAKAFLAIIPTIAALYIVGLIYYIIGKLTNDSVINLITHYIAEPFQILSQNIFS VLIVTLFVSVFWFFGLHGPNVLAPVLDGIWGPLGLNNQALYFQVHSQGIRDLIAKGAV DKAHAINGDYVNLWVRGSWDAFAWFGGSGGTITLVIAIILFSKRKDYKIVGRLGLAPG IFNINEPVLFGLPVVLNAIFFIPFAVAPLISVIIAYTATALHLVDPVVNAVPWVTPPI MNAFMATGFDWRAIVLTIINLIITFVIWVPFVIAANKLEETELD" gene 179139..179345 /locus_tag="L200010" /db_xref="GeneID:1113783" CDS 179139..179345 /locus_tag="L200010" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_835290.1" /db_xref="GI:30023977" /db_xref="GeneID:1113783" /translation="MILVNSAMMQKEIIQLLEENGFKHTKKQGLKLFFETPTDDATTD AAMAKQLIKGSSFGAAVFFNVSVV" gene 179668..181104 /gene="bglS" /locus_tag="L179659" /db_xref="GeneID:1113784" CDS 179668..181104 /gene="bglS" /locus_tag="L179659" /EC_number="3.2.1.21" /function="hydrolysis of terminal, non-reducing beta-D-glucose residues with release of beta-D-glucose" /note="energy metabolism, sugars" /codon_start=1 /transl_table=11 /product="beta-glucosidase A" /protein_id="NP_266331.1" /db_xref="GI:15672157" /db_xref="GeneID:1113784" /translation="MEHKKLKAFPNDFLWGSASAAYQVEGAPFEDGKKASVWDNFVRI PGKTFKGTNGDVAVDHYHRYKEDVALMKELGLKSYRFSIAWTRILPDGRGEVNQAGLK FYEDLIDELIANEIEPIVTIYHWDLPQALEDLYGGWESREIIADFVNYAEVLFNAFKG KVKYWVSLNEQNIFTSQGWSLATHPPGKRDMKLFYQVNHIANLTNAAVINKFHELEMD GQIGPSFAYTPQYAKDSDPLNVLAAENAEELYSHFWMDVYLYGEYPIAAMAYLRENGL APEFEAGDAELLKSAKPDFLGINYYQTATNAWNPVDGGVGVGSFNTSGKKGTTKESGI PGLHKKIQNPFIDRTNWDWEIDPEGLRIALRRITSRYRIPVMITENGLGEYDKVEDGK IHDDYRIKYLESHVKAIKEAMTDGAKVIGYHTWSYTDLLSWLNGYQKRYGFVYVDQDE TMEGSLKRIPKDSYYWYQHLIETNAEEV" gene 181168..181620 /gene="dut" /locus_tag="L181168" /db_xref="GeneID:1113785" CDS 181168..181620 /gene="dut" /locus_tag="L181168" /EC_number="3.6.1.23" /note="catalyzes the formation of dUMP from dUTP" /codon_start=1 /transl_table=11 /product="deoxyuridine 5'-triphosphate nucleotidohydrolase" /protein_id="NP_266332.1" /db_xref="GI:15672158" /db_xref="GeneID:1113785" /translation="MKIRGFEVVTKYKNAGINIPKRSTEHSAGYDIEAAETVSFAPGE IKLIPTGLKAYMQAGEVLYMYDRSSNPRKKGLVLINSVGVIDKDYYNNPDNEGHMFMQ MRNFTDEEVVIEKGERVVQGVFMPFLVADGDENQEKEERTGGFGSTGA" gene 181873..183216 /gene="ybiB" /locus_tag="L181858" /db_xref="GeneID:1113786" CDS 181873..183216 /gene="ybiB" /locus_tag="L181858" /note="similar to several 5'-nucleotidases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266333.1" /db_xref="GI:15672159" /db_xref="GeneID:1113786" /translation="MNKLRILHLNDLHSHLERFPVIERFFAEKSHEEVESLSFDLGDN VDRVHPLTEATEGQFNVELMNRLDLTAATIGNNEGLGLTHEMLSHLYDEANFPVLLSN LATNFAQSEPLIVTTSFGLRIGLIGLTAPYVLAYPQAGWELSDPFVVLDELLPKLDCD FTILLSHLGKNVDEQIAKDYDEIDLIIGAHTHHLFEHGAQVNQTLLAAAGRYGEYVGQ IDLTFNENNQLVDAQIEAIATNTLPQRKSDLVETNGWELRGHKLLEGTVVADLPKALP NVLPDFKGSHYLAKIFADYGNTKLCLMNSGLLVTDELPNHLTLDDLHEFLPHSIRLVR FTFTGEELRQVLLEIMDVSDFLATQKIQGMGFRGKTFGSLIFHGIEPREGDFYIKNSE NQSLEKISDEESYQIVLPDQYLFAWYFPLLKKLGKSEILFPYFLREIVAEHFKNK" gene 183231..183986 /gene="ybiC" /locus_tag="L183216" /db_xref="GeneID:1113787" CDS 183231..183986 /gene="ybiC" /locus_tag="L183216" /note="similar to YutD of Bacillus subtilis" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266334.1" /db_xref="GI:15672160" /db_xref="GeneID:1113787" /translation="MAKVIDESKLNYNKYPGEHVMAVGEVVQVGQRTFHIVHNYREAF DAEKLEQRFSDVLDKYDYIVGDWGFEQLRLKGFFSTSRRKMLADNKIDHLEDYVNEYC NYGCAYFVLRRIRTKDEAFVSEKLFTEKELKQGFDKPRRKRNRNRNWARDEQKVTKED KRSENSSEARKDFKIREKSTDRKPKVTDKNKKVSVSKKSQERKTDNKKQNPAKDSDKK FTMKKRNPRKKVEQTETKKQENQGFVIRNRKKD" gene 184180..185277 /gene="ybiD" /locus_tag="L184159" /db_xref="GeneID:1113788" CDS 184180..185277 /gene="ybiD" /locus_tag="L184159" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266335.1" /db_xref="GI:15672161" /db_xref="GeneID:1113788" /translation="MTENIITETRPSIYGLTRDQLIEWAIENGEKKFRATQVWDWLYR KRVQSFEEMSNLSAAFIDKLNEHFILNPLEQVVVQESADGTVKYLFMLPDQMMIETVL MRQSYGLSVCVTTQVGCNMGCTFCASGILKKERDVTAGEIVSQIMLVQKYFDERGLDE RVSHVVVMGIGEPFDNYEHLMNFLRVINDDNGLAIGARHITVSTCGFMPAKIKEFAHE NLQINLAISLHAPNNELRTSLMRITRNAPLEKLFEAIDYYTETTNRRVTYEYIMLSGE NDSPEIAQQLADLIKPRNKLSYVNLIPYNPVAEHIKYERSTKDNTAKFYDVLKKNGIN CVVRQEHGTDIDAACGQLRSKQIKKNKAKLA" gene 185523..186134 /gene="ybiE" /locus_tag="L185517" /db_xref="GeneID:1113789" CDS 185523..186134 /gene="ybiE" /locus_tag="L185517" /note="aerobic energy metabolism; similar to different oxidoreductases" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_266336.1" /db_xref="GI:15672162" /db_xref="GeneID:1113789" /translation="MDYVKLNKSRHKVKNFDGKKIPTVDVKQIISAASLAPSAHNIQS WHFVIVESEEKREALLSEVDPGNHEQIKQAGAVIVLFSDTDLVERSRDIARLGAGELD DEQLLRFNSRYPQMYEGFEELHESNYLSINIGLVTMNLVLAIKNYGYESNIIMGFNRT QKVNEILEVEKRYRPELIIPLGNSEDKGKPSYRLPQSQIMEIR" gene 186285..187265 /gene="preA" /locus_tag="L186258" /db_xref="GeneID:1113790" CDS 186285..187265 /gene="preA" /locus_tag="L186258" /codon_start=1 /transl_table=11 /product="prenyl transferase" /protein_id="NP_266337.1" /db_xref="GI:15672163" /db_xref="GeneID:1113790" /translation="MLTFWQDYPEIQNKLKDVQALMIERLKINNQEIEAALEKFASRG GKMVRPALFLLFAGIVPNGSKDEEKIIKIAASLEMLHSATLIHDDIIDDSPLRRGLPS IESQFGKDVAVYAGDFVYTVYFELLIETMNGTSFVAKNAQSMKKILQGELTQMQSAFD KNNTARRYMKAISGKTAELLSLSCLEGVYFAGGDKKLQHSARKIGRAIGLAFQVYDDI LNFTVGLDEADKPILTDFRQGIYTLPLLLAREVNDEAIAPYLEAPENLSRQECLDLAE LVTESGGIAGALLVAGRLTELALNEIRKLPESTNRQILEEATQILLERNY" gene 187459..188364 /gene="ybiG" /locus_tag="L187450" /db_xref="GeneID:1113791" CDS 187459..188364 /gene="ybiG" /locus_tag="L187450" /note="catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate" /codon_start=1 /transl_table=11 /product="1,4-dihydroxy-2-naphthoate octaprenyltransferase" /protein_id="NP_266338.1" /db_xref="GI:15672164" /db_xref="GeneID:1113791" /translation="MNFKIFAELIELKAKTASIFPFLLGLAYSLYHYQSVNLSALAIY FVAMFMFNCFVDIWDNYNDYHKAVDTDDYQKNTNIIGRENLSMGLIKSLLAFFFFGSL ILGIIVALMTGWAVFWLGLLCYVVGVFYAGGPKPLSSLPLGELLSGLTMGYVIFLICL YINSSQNFVWSFANLATTFLIALPNTLLIANLMLANNTCDLEEDEANHRYTIVHYIGK KAALIWWTTALILAFVAIVVAVILGLLSPIMLLILLIAPLMIKFARPYLQKQVKKETF ISSVKILMFFQLVQVLLFFVSLIKF" gene complement(188386..189072) /gene="ybiH" /locus_tag="L188392" /db_xref="GeneID:1113792" CDS complement(188386..189072) /gene="ybiH" /locus_tag="L188392" /note="similarity to PlnI and PlnP of Lactobacillus plantarum" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266339.1" /db_xref="GI:15672165" /db_xref="GeneID:1113792" /translation="MHLVNIRNQPLGNTIIQVLGVMAFGLFAAVVYMKTSNLIFAIVV HAMNDFMAIMASSGSLSSQQTNPLTILYEWFIFGTLAFALFYTGWTQREKFIAAIQER SPQLTARKLPTLAQSSTFRRIFALVSMIYGILILPTMLLFSKLSTSAGSRAEIANKAL PIYLLFLLGIALYIFLIVFFDFHLGNLCWLLLPYIGGPVFALIALVNGARPLTEKTNQ SKTINNKTPN" gene complement(189091..189270) /gene="ybiI" /locus_tag="L189097" /db_xref="GeneID:1113793" CDS complement(189091..189270) /gene="ybiI" /locus_tag="L189097" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266340.1" /db_xref="GI:15672166" /db_xref="GeneID:1113793" /translation="MFLAGLVLAIGKHAPASYIFLAIGATLLIGFAEELSFRGLIFGI LVKNSKDKIIVPLFI" gene complement(189320..189535) /gene="ybiJ" /locus_tag="L189326" /db_xref="GeneID:1113794" CDS complement(189320..189535) /gene="ybiJ" /locus_tag="L189326" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266341.1" /db_xref="GI:15672167" /db_xref="GeneID:1113794" /translation="MKKYISVFSVFLVWLAYLLALNPILKALGLINWLRSLGHFASLT SIIIQEIPIIIILLLLNHFFWHQKLLF" gene complement(189816..190016) /gene="ybiK" /locus_tag="L189822" /db_xref="GeneID:1113795" CDS complement(189816..190016) /gene="ybiK" /locus_tag="L189822" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266342.1" /db_xref="GI:15672168" /db_xref="GeneID:1113795" /translation="MNLASIVILAVILIITGFAIFKTVRSKGACEDCNVNTCPVKGAA ALPVSAESHSTKKTDVKHDCCN" gene complement(190003..192132) /gene="feoB" /locus_tag="L190009" /db_xref="GeneID:1113796" CDS complement(190003..192132) /gene="feoB" /locus_tag="L190009" /note="transport and binding protein, cations; GTP-driven transporter of ferrous ion" /codon_start=1 /transl_table=11 /product="ferrous ion transport protein B" /protein_id="NP_266343.1" /db_xref="GI:15672169" /db_xref="GeneID:1113796" /translation="MKIIALLGNPNSGKTSIFNQLTGSNQQVGNWPGVTVEKKSGFYR KDKSICIQDLPGLYSLSPYSLDEQVAREFLTKTPPDALINIVDSTNLERSLYLTLQLM ELGIPMVLALNMSDLLAGQGKKIDIEKLSYSLGIPVVTTSAIKNKGLDEVVKVALKSH ESQTLDYDHRLEGALSEIGKVTGFTNRFEQIKVFEGDKLLLAGETDKALSQQVHTDNS QAGLSAKQLAEIEEIVSITEKLMADDRESIIVNERYDLIGHIVQLCVTQTETGKINLT DRIDQIITHKWLGLPIFVFIMWLVYFISIQTVGTAATDWLNDVFFGQWLPDLIANGMN ALAVTPWVQDLVLNGVVAGIGAILGFVPQIFVLFLLLGILEDSGYMARVAFVMDRIFR RFGLSGKSFIPMLIASGCGVPGIMATRTIEQERDRKITIMVTTFMPCSAKLPIIALVS GAFFPHASWVAPSAYFLGMSMIILSGIILKKTRMFSGDTSAFIMELPAYHLPYAMTVL KYALDRAFSFVKRAGTIIFAMNVLIWFTSNYNWTLAHVDASQSILADVGKVVAVIFAP LGFGEWRATVATITGLIAKETIVGTMGVLFAHNSSDSHQLWSAVQATYTPLSAYSLLV FNLLCAPCVAAISTIYKEMGDVRWTLRAVGFQTLVAYSMSFIIYQLGSLFSSQNFDVF SLLALIVLSVGLYFIFRKGKGLTYELS" gene complement(192234..192710) /gene="feoA" /locus_tag="L192240" /db_xref="GeneID:1113797" CDS complement(192234..192710) /gene="feoA" /locus_tag="L192240" /function="ferrous ion uptake" /note="transport and binding protein, cations" /codon_start=1 /transl_table=11 /product="ferrous ion transport protein A" /protein_id="NP_266344.2" /db_xref="GI:30023978" /db_xref="GeneID:1113797" /translation="MIPGGKMKTLNNTHIGQIYYIHKIIGKNQAKLRDLGMISDKKIT LISTDGENAIVKIDETRLALSSEFLEQIFVKEERSSEDIIGLAHLQVGQTGVVRMIDA TSDIRRRLMDMGITRGTSVHLQKLAPLGDPLELRLRGYSLSLRKTDAEKIKVVLER" gene 193029..193457 /gene="ybjA" /locus_tag="L192996" /db_xref="GeneID:1113798" CDS 193029..193457 /gene="ybjA" /locus_tag="L192996" /EC_number="1.8.4.11" /note="this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress" /codon_start=1 /transl_table=11 /product="methionine sulfoxide reductase B" /protein_id="NP_266345.1" /db_xref="GI:15672171" /db_xref="GeneID:1113798" /translation="MEKEKLKKKLSLLAYRVTQENGTEAPFANEFDDFFEQGLYVDVV SGEALFTSLDKYQSGCGWPAFTQPIDKGVVKEKRDKSLFMERTEVRSSNADSHLGHVF TDGPLDKGDLRYCINSAALRFVPFDQLEAEGYGEYVKYFS" gene complement(193587..195251) /gene="ybjJ" /locus_tag="L193593" /db_xref="GeneID:1113799" CDS complement(193587..195251) /gene="ybjJ" /locus_tag="L193593" /note="similar to hypothetical protein YloV from Bacillus subtilis; probable kinase related to hydroxyacetone kinase, evidenced by COGnitor" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266346.2" /db_xref="GI:30023979" /db_xref="GeneID:1113799" /translation="MSNINASKFQEMVQAAASRLNEQAEYVNSLNVFPVPDGDTGTNM GMTITNGAKDVASKPADTVGQVAQILSKGLLMGARGNSGVILSQLFRGFAQYVKDYEE IDGIHLAAALQNGVEVAYKAVMKPVEGTILTVSRGAAELAKRKTDETDDAVKIMEAAL EGAKKALAMTPDMLPVLKEVGVVDSGGQGLVYIYEGFLMALNGEFVPETPVAELGAMD RMVNVEHESVANASTADIKFGYCTEIMVELGKGPTSRESYDHDNFQAYLAGIGNSLLV VDDEEVVKVHVHTEDPGLVMQEGLKYGRLVKVKVDNMRLQNEGVAEKEAKSTNVSTST SKKDWGLIAISAGEGLADIFREMGVNHVVSGGQTMNPSTEDILTAIEAVNAEKVIILP NNKNIFMAAKSAAEVAEIPVEVIESATVPQGFTALLSFDPTRSIEENKAAMTDALLDV KSGSVTTAIRDTNVDGIEIHKKDTLGMLNNKIVVSTRKMNDAIFAVFDQMIDEDSEIV AIYIGEEGKKANADKIAKELEKKYPEIEVEIHEGKQPVYPYLFSVE" gene complement(195251..195619) /gene="ybjK" /locus_tag="L195257" /db_xref="GeneID:1113800" CDS complement(195251..195619) /gene="ybjK" /locus_tag="L195257" /note="similar to putative Asp23 protein of Bacillus subtilis encoded by yloU gene; conserved hypothetical akaline shock protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266347.1" /db_xref="GI:15672173" /db_xref="GeneID:1113800" /translation="MKMSVTINNQHGNVDIATEVIATVVGASTTEIFGVVGMTSKSAV KDNVRSVLRQENYSKGVVVTTADNETSIDVYVVISYGVKISEVAKNIQERVRFNLENQ LGITASSVNVYVQNVKVVED" gene complement(195892..196086) /gene="rpmB" /locus_tag="L0422" /db_xref="GeneID:1113801" CDS complement(195892..196086) /gene="rpmB" /locus_tag="L0422" /note="required for 70S ribosome assembly" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L28" /protein_id="NP_266348.1" /db_xref="GI:15672174" /db_xref="GeneID:1113801" /translation="MSKECYFTGRKTVSSNNRSHAMNQTKRVVKPNLQKVTILENGEL KTVWASAKALKKLPAGVERV" gene 196222..196881 /gene="ybjB" /locus_tag="L196216" /db_xref="GeneID:1113802" CDS 196222..196881 /gene="ybjB" /locus_tag="L196216" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266349.1" /db_xref="GI:15672175" /db_xref="GeneID:1113802" /translation="MENLIEELTAKNKEYIHSVTKQLILVGKSDEEVKEILNDILPQI IEGQKSGIIARKLLGAPTEFVTQYQPKVADRPVSEKNENPVLMWLDSSLLFLGFISLL NGVTALITSKAPVYGLITTILSAAVAGLVMYMMYRYFYRPKADNSRRTWNWKGFAATT LSVLLWIAVTIFSGLLPTSVNLQLPAIALVIVGLVAFGVRWLLKRQFNIQSALVAQPR R" gene 197074..197943 /gene="rmlA" /locus_tag="L197041" /db_xref="GeneID:1113803" CDS 197074..197943 /gene="rmlA" /locus_tag="L197041" /EC_number="2.7.7.24" /function="DTDP-L-rhamnose biosynthesis in lipopolysaccharide biosynthesis pathway" /note="sugar-nucleotide biosynthesis and interconversions" /codon_start=1 /transl_table=11 /product="glucose-1-phosphate thymidylyltransferase" /protein_id="NP_266350.1" /db_xref="GI:15672176" /db_xref="GeneID:1113803" /translation="MKGIILAGGSGTRLYPLTRAASKQLMPIYDKPMIYYPLSTLMLA GIKDILIISTPTDTPRFKELLQDGSEFGINLQYAVQPSPDGLAQAFIIGEEFIGDDSV ALILGDNIYHGPGMSKMLQNAAAKEKGATVFGYHVPDPERFGVVEFDENMNAVSIEEK PEEPKSNYAVTGLYFYDNDVIEIAKNIEPSPRGELEITDVNKAYLERGDLSVELMGRG FAWLDTGTHESLLEAAQYIETVQRMQNMQVANLEEIAYRMGYITADDVLKLAQPLKKN EYGQYLLRLIGKD" gene 197991..198281 /gene="ybjD" /locus_tag="L197961" /db_xref="GeneID:1113804" CDS 197991..198281 /gene="ybjD" /locus_tag="L197961" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266351.1" /db_xref="GI:15672177" /db_xref="GeneID:1113804" /translation="MLKNIWEWFLWFTGVTDAGWSAWWGGFFSCLPLFGVFAVVWRRL KCHAPGCHQIGLHRTADGLYVLCRKHHPDVPNNLTLKHIQKSHVNAKAKKDK" gene 198350..198943 /gene="cpsM" /locus_tag="L198323" /db_xref="GeneID:1113805" CDS 198350..198943 /gene="cpsM" /locus_tag="L198323" /function="DTDP-L-rhamnose biosynthesis in lipopolysaccharide biosynthesis pathway" /note="sugar-nucleotide biosynthesis and interconversions" /codon_start=1 /transl_table=11 /product="dTDP-4-keto-6-deoxyglucose-3,5-epimerase" /protein_id="NP_266352.1" /db_xref="GI:15672178" /db_xref="GeneID:1113805" /translation="MTDNFFEKTLAAREISQIPGMLEFDIPVHGDNRGWFKENFQKEK MMPLGFPESFFAEEKLQNNVSFSRKNVLRGLHAEPWDKYISVADGGSVLGAWVDLREG ENFGHVYQTVIDASKGIFVPRGVANGFQVLSDTVSYSYLVNDYWALELKPKYAFVNYA DPTLGIKWEDVENAEVSEADKNHPLLKDVKALKADEL" gene 198943..199197 /gene="ybjF" /locus_tag="L198940" /db_xref="GeneID:1113806" CDS 198943..199197 /gene="ybjF" /locus_tag="L198940" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266353.1" /db_xref="GI:15672179" /db_xref="GeneID:1113806" /translation="MFALHLRTKKRLEFWQVEKNTDRPCWANQAFTDGGFSWNDKSLS VKNVGGLLKMTVPIGDYLVFNGKYLKAVPKAKFVREYRVD" gene 199239..200288 /gene="rmlB" /locus_tag="L199221" /db_xref="GeneID:1113807" CDS 199239..200288 /gene="rmlB" /locus_tag="L199221" /function="DTDP-L-rhamnose biosynthesis in lipopolysaccharide biosynthesis pathway" /note="sugar-nucleotide biosynthesis and interconversions" /codon_start=1 /transl_table=11 /product="dTDP-glucose 4,6-dehydratase" /protein_id="NP_266354.1" /db_xref="GI:15672180" /db_xref="GeneID:1113807" /translation="MTEFKNIVVTGGAGFIGSNFVHYVYNNHPDVHITVLDKLTYAGN VNNINMLFDSGRVELVVGDIADPEIVDQVASKADAIVHYAAESHNDNSLKSQDEFIQT NFIGTYTLIQAARKYDLRFHHVSTDEVYGDLPYREDLPGHGEGEGEKFTDKTPYNPSS PYSSTKAASDLIVRAWVRSFGLKATISNCSNNYGPFQHIEKFIPRQITNILSGIKPKL YGDGKNVRDWIHTEDHSSGVWTILTKGRMGETYLIGADGEKNNKEVLEDILTRMGKDK DDYDRVTDRAGHDLRYAIDNSKLRTELGWAPKHTDFESGLQATIDWYRENENWWKAEK EAVEAKYAETQKVLD" gene 200377..201276 /gene="rmlC" /locus_tag="L320" /db_xref="GeneID:1113808" CDS 200377..201276 /gene="rmlC" /locus_tag="L320" /function="DTDP-L-rhamnose biosynthesis in lipopolysaccharide biosynthesis pathway" /note="sugar-nucleotide biosynthesis and interconversions" /codon_start=1 /transl_table=11 /product="dTDP-4-dehydrorhamnose reductase" /protein_id="NP_266355.1" /db_xref="GI:15672181" /db_xref="GeneID:1113808" /translation="MILITGGNGQLGTELRHLLDERGMAYTATDAKELDITDGVAVDK FFDENKPELVYHCAAYTAVDKAEDEGRELDEKINVDGTKNVAEAAARVGATLVYISTD YVFGGTLPIGQEWPVDAPKAPESEYGRTKHLGEEAVVASGVKHYIIRTAWVFGSYGPN FVFTMQNLATRFPELTVVNDQHGRPTWTRTLAEFMVYLVSEKADFGFYHLTNDAAPGE DVTWFDFAKEILKDTDVLVKPVDSSKFPAKAKRPFNSTMSLEKAKATGFVIPTWQEAL ASMLEKGDLRENKDGVKGEINKK" gene 201410..202618 /gene="rgpA" /locus_tag="L1389" /db_xref="GeneID:1113809" CDS 201410..202618 /gene="rgpA" /locus_tag="L1389" /function="formation of rhamnose-glucose polysaccharide" /note="surface polysaccharides, lipopolysaccharides and antigens" /codon_start=1 /transl_table=11 /product="rhamnosyltransferase" /protein_id="NP_266356.1" /db_xref="GI:15672182" /db_xref="GeneID:1113809" /translation="MKKHVFIIGSRGLPAKYGGFETFVEELVKHQNNKNIKYHVACQS ENSDMALPGEHFEYLGADCFVIKLPKIGSARVIAYDILAINVALKYCKKEEIKAPVFY ILGNTAGGFIGHYANKIHKLGGKLFVNPDGLEWKRTKWAAPIRSYLKFAEKKMVRYAD LIISDNAGIKEYLTSEYGQVESEVIAYGTEKFKSDLTESETLVKYKVNDYYLIVGRFV PENNYETLIRAFMKSSTKRDLVIITNHEGNAYFKELREKTQFDKDARIKFVGTVYNQN ELRYIREHAFAYLHGHEVGGTNPGLLEALWSTAVNVVLGVNFNRTTAGDSVIYFDKEN LLTTLSEVENLTPDEGQRLHEKAQAIIEEKYTWEHICAQYEELFDPKFTDESEPLRKM ENLARGGDES" gene 202608..203567 /gene="rgpB" /locus_tag="L2599" /db_xref="GeneID:1113810" CDS 202608..203567 /gene="rgpB" /locus_tag="L2599" /function="side chain formation of rhamnose-glucose polysaccharide" /note="surface polysaccharides, lipopolysaccharides and antigens" /codon_start=1 /transl_table=11 /product="rhamnosyltransferase" /protein_id="NP_266357.1" /db_xref="GI:15672183" /db_xref="GeneID:1113810" /translation="MRVNILMSTYNGEKFVADQIESIQKQTYTDWNLIIRDDGSSDRT CEIVDDFVSKDNRIKLIRAENVGVIKSFHELVTDSNNADFYFFADQDDYWLPEKLSVM LEETKKHDNSKPVMYYTDLKVTDRNLNVTSESMIRGQSDHANTKLVQELTENTVTGGA SMINHELAQLWQSTNDIIMHDWYLAIVAAALGELVYIDQPTHLYRQHDSNVLGARTLS KRIKKWIHPNLWFEKYWWLITASQKQAQKLLTENLSLMSEDDKALVSDYVNILKQPKA ERRQILDRYNLRKNKNYHTSIFRTLIITKFAYKGKKTNEFLQP" gene 203548..204357 /gene="rgpC" /locus_tag="L3425" /db_xref="GeneID:1113811" CDS 203548..204357 /gene="rgpC" /locus_tag="L3425" /note="transport and binding protein, carbohydrates; organic alcohols and acids; probably involved in side chain formation of rhamnose-glucose polysaccharide" /codon_start=1 /transl_table=11 /product="polysaccharide ABC transporter permease protein" /protein_id="NP_266358.1" /db_xref="GI:15672184" /db_xref="GeneID:1113811" /translation="MNFFSRRNQILLKELVKTDFKLRYQGSLIGYLWSILKPVMLFVI MYLVFVRFLRFGSAVPHFAVALLLALTLWNFFAETTNMGMLSVVSRGDLLRKISFSKP IIIFSVVANALINLLISLVVVVIFSFLNGIHMSWNVIFVLPLLVELVLFATGIAFILA TIFVKFRDLGPIWEVGMQAGLYGTPIIYPIIQVSQTHPTIAKILMLNPMAQIVQDMRY ILTFSNNTNPTLWQMTDKPYLIIIPYLIPFIIFGIGLWIFTKNSSKFAEII" gene 204357..205553 /gene="rgpD" /locus_tag="L4342" /db_xref="GeneID:1113812" CDS 204357..205553 /gene="rgpD" /locus_tag="L4342" /note="transport and binding protein, carbohydrates; organic alcohols and acids; probably involved in side chain formation of rhamnose-glucose polysaccharide" /codon_start=1 /transl_table=11 /product="polysaccharide ABC transporter ATP-binding protein" /protein_id="NP_266359.1" /db_xref="GI:15672185" /db_xref="GeneID:1113812" /translation="MNDNIAVKIDHVSKFFHLPTEATNSLRTTLVNRLRGIKGYKEQH VLKDIDFTVEKGDFFGIVGRNGSGKSTLLKIISQIYTPEKGNVIVNGKLVSFIELGVG FNPELTGKENVYLNGAMLGFSREEISDMYDEIVDFAELEEFMNQKLKNYSSGMQVRLA FSVAIKARGDVLVLDEVLAVGDESFQRKCNDYFLERKKSGKTTILVTHDMGAAKKYCN KAILIENGLIKVSGDVNDVANQYSLDNLQTEVTARSDLEIDVKEEWIENLEVNFINQQ KITPNDEVKFEVSYDVKKDTETYIAFSLTDVDRNIWIYNDNSLDYLTKGKGHNRAIYT CKLDQVNNLKLKLQVSIRNKRDEMIAFADEKVILINRNDISDDDKSAQDSATGLIQRN GSWEFE" gene 205546..205866 /gene="ycaF" /locus_tag="L5525" /db_xref="GeneID:1113813" CDS 205546..205866 /gene="ycaF" /locus_tag="L5525" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266360.1" /db_xref="GI:15672186" /db_xref="GeneID:1113813" /translation="MNKIQNRANKQSKYSRPENIFLFLILLIGFFTISITPPMTMGDE GYHLSQSYNLFSTKAPESMSNLQVRAKEFKAIGIGTQSKVSPTFYKKLITEKINLQDD GVKF" gene 205908..206900 /gene="ycaG" /locus_tag="L5881" /db_xref="GeneID:1113814" CDS 205908..206900 /gene="ycaG" /locus_tag="L5881" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266361.1" /db_xref="GI:15672187" /db_xref="GeneID:1113814" /translation="MHLPGAIGVLIARLIYPSLGIMDYGGRIANLICFSLIFYFLIKK NEHAKWSMILIFMVGGIQKIFSPSYDVVSFLVFSAFVVNLSDLVRIEKIRDVGLKKAI YTIFLICSFYFIKSNYIFAFFALLGLPMLYRPVIDKVRKLSSLGKTFLSMLIIGIISV AYLFLNKKMSIFTIIKKFIENYMNVELMGNNAKQLWQVVPTTLPIFVNILFILILFIV MMGELKATWATGTVIIFSLTYLVNWFGIFAGFFIDSASLASTNLQGRYLSPFLFFFVP FVQNLGKKFNFTMSEKSVRRLSVWTIIIISVLYLVVTFYRSYVLKITPTWTNNA" gene 206916..207890 /gene="rgpE" /locus_tag="L6907" /db_xref="GeneID:1113815" CDS 206916..207890 /gene="rgpE" /locus_tag="L6907" /note="surface polysaccharides, lipopolysaccharides and antigens; probably involved in side chain formation of rhamnose-glucose polysaccharide" /codon_start=1 /transl_table=11 /product="glycosyltransferase" /protein_id="NP_266362.1" /db_xref="GI:15672188" /db_xref="GeneID:1113815" /translation="MLDKISVVVTCHNHEAYIEQCLRSVFAQTYRNIELLVFNDGSTD QSGQVIEKILKESPFSETFYFSEENRGIVSIRNDALTKIKGDFLLFVDSDNYLDDQYI EILHQSLQEQNVDIAYCQLWDFVNSRQVLRDDLEFSLDKELEGNLIDMSSLVRVSKIL NVRFDEQLNHKALEDYDFWLSLILINHAKPIFVKGIKLNYRVLNTSRTERGNWDKYYD SYFYLLEKHQTLLPKEVLKASQANVKIWLKSYLESDQQLTENILKIKEKDKHISNLQR EIDLLKSLLAAKEDEIDKTKAELEEKKQEIDIIKNSKSYKFLQKLKGN" gene 207900..209669 /gene="rgpF" /locus_tag="L7894" /db_xref="GeneID:1113816" CDS 207900..209669 /gene="rgpF" /locus_tag="L7894" /codon_start=1 /transl_table=11 /product="polysaccharide biosynthesis protein" /protein_id="NP_266363.1" /db_xref="GI:15672189" /db_xref="GeneID:1113816" /translation="MKRLLLYVHFNKNNKVSDHVIYQLKHMRSLFEKVIFISNSELSE QYQQQLVDFVDEFIQRENKGFDFAAWRDGMEQVGFDQLKMYDSVTLMNDTCFGPLYEM APIYEKYEIQNIDFWGITNHRAYHESKNHYFDEHIQSYYKVFNNNVINSQIFEDFWKN IVDYTNVQDVIDHYEIQSTKIFMDAGFKYESVLDTRALDAKNLLHPDFSYYAPDVILK EKVPFIKVKAFQSIQSNGIAYYMLDYIDRNTDYPKSLVVDHLSTVGYPDLNFLLPSKM ITPLSKTVLHQTVAVHLHVYYPELLEEFLDAFKNFSFDYDLYLTTNTDEKEEIIKEML KCKDAKAKLVRTPNHGRDIVPFLALKEELKKYDIVGHFHTKRSLEAAFFAGESWRTEL ISMLIEPADNIMAHFEQKQKLGIVIADIPSFFRFNKIVNADNENKQIAPIMNDIWKRM KMNKKVNFHDFNTFTMSYGTFFWAKIEVLEPLFNLEIMDREIPNEPLPQNTILHAIER VLIYLAWDKEMDFNISPNKLNLTPFIDSRTLNQRFYISPENSDDIRLRYVLALSIKKL KRLIVYRFYKLFKLDTTKLFLKE" gene 209672..211216 /gene="ycbA" /locus_tag="L9639" /db_xref="GeneID:1113817" CDS 209672..211216 /gene="ycbA" /locus_tag="L9639" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266364.1" /db_xref="GI:15672190" /db_xref="GeneID:1113817" /translation="MKRNQKLFILVISVILLFITQLAVSIIPNQMPNTSKLFISLVVI VGVVFCLKLGNSEKLVKNTFFIILFLGIGISFIKPVQFGVDEETHLRWTIRLADGQLF TREQEKQPDWDTVEKYDTLRNPAAEHAKNGFPNKFFSDEHEASTYSGKKIGINNISLI PNALGWKIGMVTTSRVAVAYYLGRIFNVIAYALMVCLAMKIGKKYREVLLLFAAFPTT LWIVSSFQYDWLFYSLSLMILAFITRFISEKESIRKKDLIFYLVTTTLMMFPKFPFIL MGVVPLFISKRYYINVKDKIWYGISLIGSVLIAVGWYLQSTIVKKISNGTSPEVSTNI TNKAGISYFIKHPLPIVRTFIRDVLGSFSGFSGSNTSNPPAPLQYVQHTSSFITGILP VIFTFLFILVTIRIKIKLDKTTKIFIYIGYLVISLAIIYALSGDNRVGYNIGELSISG VQFRYFYPILLSLPLLWRDWMKKIIPINEVKELEDESRITDFLQISMIYINVLILSLG MYTLVS" gene 211306..212031 /gene="ycbB" /locus_tag="L11285" /db_xref="GeneID:1113818" CDS 211306..212031 /gene="ycbB" /locus_tag="L11285" /note="surface polysaccharides, lipopolysaccharides and antigens" /codon_start=1 /transl_table=11 /product="glycosyltransferase" /protein_id="NP_266365.1" /db_xref="GI:15672191" /db_xref="GeneID:1113818" /translation="MNKQRILLIIPAYNESEGIIKVVEVVKQYISKIELEIDYVVIND GSTDNEEEVLREYNITHIELIQNLGIGGAVQTGYMYALENSYDIAVQFDGDGQHDIHS LPNLIEPILNDEADFTVGSRFLDESNSEFKSSKSRQLGIKILSSLIYMSSKIKIKDVT SGYRAGNRKAIEQFVKRYPRQYPEPESYMHLFSKNIRVKEVGVRMFERTTGVSSINLI KGVNYMVSVSLAILASSILGKEK" gene 212028..212399 /gene="ycbC" /locus_tag="L11986" /db_xref="GeneID:1113819" CDS 212028..212399 /gene="ycbC" /locus_tag="L11986" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266366.1" /db_xref="GI:15672192" /db_xref="GeneID:1113819" /translation="MIMPIQLRLLAIILAVLFFVYMVRLVRKDKAEIRHMLKWLVLAL IILIGAIFPEMGSRIAHFFGIQTLTSLALFILVGILLIISLKYQMSLISAEKQIKNLI QEVSLANKKIKDLERKNDNKE" gene 212383..213324 /gene="ycbD" /locus_tag="L12335" /db_xref="GeneID:1113820" CDS 212383..213324 /gene="ycbD" /locus_tag="L12335" /note="surface polysaccharides, lipopolysaccharides and antigens" /codon_start=1 /transl_table=11 /product="UDP-glucose 4-epimerase" /protein_id="NP_266367.1" /db_xref="GI:15672193" /db_xref="GeneID:1113820" /translation="MITKSNILITGGAGFIGSSLANELLPQNKITVIDNLSMGDFNNL HETSNLTKILGDVTDKNLLVKVLEENDFDYIFHLAAIASVADSVARPYETHQVNFDST MTLLEILRQNKKSLKRFVFSSSAAVYGDEPTLPKQEEGTIRPLTPYAIDKFASEKMTM IYNNLYDVPTSATRFFNVYGPNQNPNSPYSGFISILVDRLRENTELTIFGDGEQSRDF VYIEDVIQALLLIATSEQSFGEVYNVGTGVKNSINDLTKFAQKFTNKELSIKFDDVRQ GDIKDSVSDISKLKDIGYSPKFDLSNGMKKYLNYEFK" gene 213324..214751 /gene="ycbK" /locus_tag="L13324" /db_xref="GeneID:1113821" CDS 213324..214751 /gene="ycbK" /locus_tag="L13324" /note="surface polysaccharides, lipopolysaccharides and antigens" /codon_start=1 /transl_table=11 /product="polysaccharide biosynthesis export protein" /protein_id="NP_266368.1" /db_xref="GI:15672194" /db_xref="GeneID:1113821" /translation="MKNEFKTGIFFTAIAQYSTVIVQLIINMILSRLLTPGEIGMVTI VQVIIFFFQLLAGSAIGPAIIQNKNLNEKDYGIIFNYSVIFGIFLVLAFGFGGGIILS TIYSNPIYIPLCWAMTPIIMMSSMVQVPNGILGKEKRFKEISIRLLLSGILGAIFGIT AAFLHAGVYAMVLVYVVTDLTSFLLTFKIVKIDYTRSLNFKPVREILPFVKHQTGFSV INYFYRNLDNLLVGKFLGTTLLGNYSKGYQLLSFPITIFLNVINPVMQPILAEHEKNV VLIRDTYLKVCRLLAIVAIPVSIFFSLNAGPIIYLLFGKQWSMAILPLSILSLSICPQ MLSQSMSAIWQSRNLTKIQSVSGFISLGIISLCIFIGILGGNLTSVSIAVSGSYFLNF IVSGSLLMRRALDSNFFQLFKVIIKPLFLGIILSVIVILTNPYISFSNLFITLLLRGI VWLIIVALFLVVTGEFKKIKEMVKK" gene 214748..215887 /gene="ycbF" /locus_tag="L14736" /db_xref="GeneID:1113822" CDS 214748..215887 /gene="ycbF" /locus_tag="L14736" /note="surface polysaccharides, lipopolysaccharides and antigens" /codon_start=1 /transl_table=11 /product="LPS biosynthesis protein" /protein_id="NP_266369.1" /db_xref="GI:15672195" /db_xref="GeneID:1113822" /translation="MKEKTVAIFNGYYIPHLGGVERYTYNIAKKLTEKGYRVIIITTQ HDENLTNEEIQEGIKIYRLPIKNLWKNRYPFLKKNRIYHSLIEKIEAESIDYYVANTR FHLPAMLGVKMAKAKGKEAIVIEHGSSYLTLNNPVLDFMLRKIEQLLIGRVKKDTSLF YGVSNEASEWLKTFDIKAKGVLPNAVAVDEYFNQKIEKDEKKLTISYAGRLIPQMKGV EILLSTFSKLSKERKNLELIIAGDGPLLNEVKRKYSQKNIKFLGYVPYEKVLEIDAKS DVFVLMSRSEGFATAMLEAAMLENVIITTPTVGGARDIMPDETYGYIIENNETKLFET LTKVLDNKEHMRLMQKKISKNVLENFTWEQSAKQFIKVFNELDEK" gene 215887..216723 /gene="ycbG" /locus_tag="L15884" /db_xref="GeneID:1113823" CDS 215887..216723 /gene="ycbG" /locus_tag="L15884" /note="surface polysaccharides, lipopolysaccharides and antigens; similar to Cps19aG protein in LPS gene claster of Streptococcus pneumoniae" /codon_start=1 /transl_table=11 /product="LPS biosynthesis protein" /protein_id="NP_266370.1" /db_xref="GI:15672196" /db_xref="GeneID:1113823" /translation="MKELTNEELRGIQLEQLKYIDRICRENGIEYTLAGGSLIGAIRH GGYIPWDDDIDIELTRPHYDHLISVLMDQLPNEKYALLHYKVRETYLPFAKLYDTRTS FTSKIDNLNRGTGVFLDIFPMDILPDNEEERQVFKKEFLKKAIQLTASNPHGLDFASS SKKIYFWGKLVLWMPQHIRFYGKYRILAEKLDEFMQKYRNSDNQLISYLYTGYKKAIF PKEIWEEYEDVKFEGLTARKLKNHEEYLTRQYGDYMKLPPENERVNHDYYKWYWKEKN EI" gene 216713..217714 /gene="ycbH" /locus_tag="L16653" /db_xref="GeneID:1113824" CDS 216713..217714 /gene="ycbH" /locus_tag="L16653" /note="surface polysaccharides, lipopolysaccharides and antigens; similar to many glucosyl or galactosyl transferases involved in polysaccharide biosynthesis" /codon_start=1 /transl_table=11 /product="sugar transferase" /protein_id="NP_266371.1" /db_xref="GI:15672197" /db_xref="GeneID:1113824" /translation="MKFSVIIPVYNASKFIDYCVESVLSQSYSDIEVILINDGSTDKS GEICEGFARKDNRVKVYHQENQGAAVARNHGIRKATGDYLLFPDSDDYYASSLGFEEI NNQLEETKADVLIHDSFVERGNGTPDDLHSSLLREEVLKLEKIEFIEYLIKKDKLTRS AWTKVISRSFLSKNNILFPTVRQTEDTGFTAELVRLGNSFDWYEKQFYAYVKHDESVT AKRLPESIIHDSFSVIKTAVINGELIKDSRYREAYYSYLAYPYVVLIGQTKEAINRGV IKENTILNDLKQYSFLMKYNLNPKLKVIKHLYKLFGYLMIVFLLSVMMELTYRKQGV" gene 217716..218573 /gene="ycbI" /locus_tag="L17695" /db_xref="GeneID:1113825" CDS 217716..218573 /gene="ycbI" /locus_tag="L17695" /note="surface polysaccharides, lipopolysaccharides and antigens; similar to putative glycosyl transferases" /codon_start=1 /transl_table=11 /product="sugar transferase" /protein_id="NP_266372.1" /db_xref="GI:15672198" /db_xref="GeneID:1113825" /translation="MTTTLTILTPTYNRAYILPKLYASLVEQTNKHFDWMVVDDGSTD NTEQLISEFIADGKINIVYIKQKNGGKHRALNTGAQSINSDYIFIVDSDDYLTNDAID IILENSHYLKEKNLMGMTLLRGYAPDKVIGEKYPEDFMIKNFNQVRYNMGIKGDKAEV VSTKIFRETPFPEIPGERFMSEGVAWKQLAHKGDSLFINKIVYITEYLEDGLTHSGRL LLIKNPLGAMLNAKLAMTKEFSFKIREKNSLLYIAYGFFAKKKVREIITESGQRKLVR VNLLFGWMI" gene 218600..219826 /gene="ycbJ" /locus_tag="L18600" /db_xref="GeneID:1113826" CDS 218600..219826 /gene="ycbJ" /locus_tag="L18600" /note="surface polysaccharides, lipopolysaccharides and antigens; similar to glycerol diester phosphodiesterases" /codon_start=1 /transl_table=11 /product="LPS biosynthesis protein" /protein_id="NP_266373.1" /db_xref="GI:15672199" /db_xref="GeneID:1113826" /translation="MIETTLVKMKKIDLKIIFVFVLVIFGMSYELRGFADDTSSPTPV YRVYNPRNLEHLYTSSLNEKNTLVRIGWGRFEGVTFYGKNNGDTPIYRLYNFSIRQHL YTADLNEARVLSRSGWKNEGIVFRATVAGSVPVYRLYSSKIKQHLFTTDANEKRVLSA GNFWRYEGIAWYGVSATNSDSDDILLVNHRGNHTEFPENSVESVLSAKYSAVETDIQT TSDGQWVNMHDATVDRTTNGHGAVADLTLAQIQNLYLKNNSGQITQYKVPTLDQYLAA CKQKGVIPLIEIKQATATPEQYSDIAMKFEQYGFSSTGYIISGYEEPLSKIESLIPTV NVMYIVEGYSTENVTFAVSLGIKSGLDMGYTNINQQVVEAVHASGIKVGAWTVGDINT LKYLQSIGVDVLTTNY" gene 219837..220265 /gene="tagD1" /locus_tag="L19816" /db_xref="GeneID:1113827" CDS 219837..220265 /gene="tagD1" /locus_tag="L19816" /note="surface polysaccharides, lipopolysaccharides and antigens" /codon_start=1 /transl_table=11 /product="glycerol-3-phosphate cytidiltransferase" /protein_id="NP_266374.1" /db_xref="GI:15672200" /db_xref="GeneID:1113827" /translation="MKDNEKQRIVLVAGTFDILHESHINMLRNARNLGDKLIVMLSTD EFNATKGKKSYQEYDTRKYVLESVRYVDLVIPEQSWDDKALYIDMFDVDIFAMGDDWR GKFDFLKDEFPHLKIMYFPRGKISSSKVKEELGKLYQKRK" gene complement(220391..220903) /gene="yccB" /locus_tag="L20397" /db_xref="GeneID:1113828" CDS complement(220391..220903) /gene="yccB" /locus_tag="L20397" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266375.1" /db_xref="GI:15672201" /db_xref="GeneID:1113828" /translation="MKLKKSHIIPLILFSGLLIAKPVFAEEVISSDNTPMGHYIEQEQ SQEASTESTSDSSTTPNIRARSFAAVPASNAPSDLKSDDNTLPRKGLKIHIYTTDTNE KNVLSKSGWNYEGIVFYASTSSIENIPVYRLYNSGIKQHLFTTDSNEKNVLSTLGWSY EGIAWYGLKS" gene 221285..222766 /gene="guaB" /locus_tag="L21264" /db_xref="GeneID:1113829" CDS 221285..222766 /gene="guaB" /locus_tag="L21264" /EC_number="1.1.1.205" /function="purine ribonucleotide biosynthesis" /note="catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate" /codon_start=1 /transl_table=11 /product="inosine 5'-monophosphate dehydrogenase" /protein_id="NP_266376.1" /db_xref="GI:15672202" /db_xref="GeneID:1113829" /translation="MSNWETKFLKKGFTFDDVLLIPAESHVLPNEVSMKTKLAKNLTL NIPIISAAMDTVTDSKMAISMARQGGLGVVHKNMSVEEQAEEIHKVKRSESGVITDPF FLTPNHKIEEAENLMATYRISGVPIVDTLENRKLVGIITNRDLRFITDYNQQIKNMMT SENLITAPVGTTLDTAARILQEHKIEKLPLVDEAGKLAGLITIKDIERVIEFPNAAKD EQGRLLVAGAVGVSSDTFERAEALFAAGADAIVIDTAHGHSAGVLRKIREIRNHFPDR TLIAGNIATGEGARALFEAGVDVVKVGIGPGSICTTRVVAGVGVPQITAIYDAANVAR EFGKTIIADGGIKYSGDIVKALAAGGDAVMLGSMLAGTDESPGEFEIFQGRKFKTYRG MGSLAAMKKGSKDRYFQGAVNEANKLVPEGIEGRVAYKGTATDIVFQMLGGLKAGMGY TGAADITALHDSAQFIEMSGAGLKESHPHDVQITKEAPNYSVQ" gene 222972..224117 /gene="yqeL" /locus_tag="L22900" /db_xref="GeneID:1113830" CDS 222972..224117 /gene="yqeL" /locus_tag="L22900" /note="in Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis" /codon_start=1 /transl_table=11 /product="GTP-binding protein YqeH" /protein_id="NP_266377.1" /db_xref="GI:15672203" /db_xref="GeneID:1113830" /translation="MYCIGCGAKIQTEAKNALGFLPAGALKKKIAERDQMEAVQAGDE GSEASIKTEDLYCQRCFRLRHYNEIAPTSLTDADFLRLLKEIGQHDALIVNVVDIFDF NGSLIPNLHKLTGGNDLLMVANKRDVLPKSLKVGKLTAWLREQAASRSLKPKDILVTS AQNKDDVAELMEAIEYYRRGRDVYVVGVTNVGKSTLINAIIKSASGSEDVITTSRFPG TTLDKIEIPLDEDSALIDTPGIIHRGQIAHYLEPEDLKYVSPRKEIKPKTYQLDPEQT LFFGGLARFDFISGERQGMTAYFDNEINVHRTKLEGATEFYEKHKGELLAPALVGAKL VRREFKITDKSDIVFSGLGWVRVPQKAVVAAWVPEGVDVVVRKALIG" gene 224321..224680 /gene="yccE" /locus_tag="L24277" /db_xref="GeneID:1113831" CDS 224321..224680 /gene="yccE" /locus_tag="L24277" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266378.1" /db_xref="GI:15672204" /db_xref="GeneID:1113831" /translation="MQLGETAEEACLRELYEETGLQLEIERLAFIHENFFTGQESDFL NKVNCHELSFYFLMKPLTENLSVKSESFGTDGSKEFLKWIPIAEYKNYKAFPTFFADE LKNLSVNSQIKRIVTTE" gene 224764..226008 /gene="hflX" /locus_tag="L0162" /db_xref="GeneID:1113832" CDS 224764..226008 /gene="hflX" /locus_tag="L0162" /note="GTP-binding protein; putative counterpart of YnbA of Bacillus subtilis and HflX of Escherichia coli" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266379.2" /db_xref="GI:30023980" /db_xref="GeneID:1113832" /translation="MIDLEEKQERVLLAGVETAENFQAFESSMIELAELTKTAGGLVI DQFTQKRERPDSRTMIGSGKLEQMRWAIEVGEIDTVIFNDRLSPRQNVNLEEALGVKV IDRMQLILDIFAMRARSHEGMLQVEEAQLNYLLPRLVGQGIMLSRQGGGIGSKGPGET KLETDRRYIRTRIENIDKALKKVEKTRENIRQKRSKSGIFRIGLIGYTNAGKSSIMNA LVGLDKEQYEQNELFATLDATTKAVKLVEDFTVSLTDTVGFIQNLPTELIKAFKSTLE ESANVDLLIHVVDASNPHHEIHEQTVLKIMEDLKLTNIPVLNVYNKMDIAPSDFLPTL SPSLQLSIKSESGVQWLKTAILEKLHELFDAFELELPYEKAYQLPELRKSALVQSVVE GEKGYLIKGLIAPELSWKLPNN" gene 226054..226368 /gene="yccF" /locus_tag="L26054" /db_xref="GeneID:1113833" CDS 226054..226368 /gene="yccF" /locus_tag="L26054" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266380.2" /db_xref="GI:30023981" /db_xref="GeneID:1113833" /translation="MEMNGKQKRYLRSLAVNIKPIVQIGKSGLSNEILTSIRNAADAR ELIKVNILQNSDEVATDVAEAIEEMGLDVVQIIGRNLIVFKVSDRKENRKISVEVKNI VK" gene 226415..227014 /gene="yccG" /locus_tag="L26400" /db_xref="GeneID:1113834" CDS 226415..227014 /gene="yccG" /locus_tag="L26400" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266381.1" /db_xref="GI:15672207" /db_xref="GeneID:1113834" /translation="MVIDLLTPFTKVELKAKEDEKRRAIGLFWGNFNPVHVGHLTIAD QVRQELNLEKVVFLPEHNTDGHVAAMLTAAIEDCPGLEVDACRLKAKDGADIYQTVLE LHEENPDCDFYFIIGGDMIYGLAHWAHIDELLELVQFVGIRRPRYRAGTSYPIMWVDV PMMDISGNLIREQLHRGIKPHFLLAPKVLDYILKEGLYV" gene 227007..227597 /gene="yccH" /locus_tag="L26998" /db_xref="GeneID:1113835" CDS 227007..227597 /gene="yccH" /locus_tag="L26998" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266382.1" /db_xref="GI:15672208" /db_xref="GeneID:1113835" /translation="MFDFYPEVNLSREDLLAKIASMVKKSRFEHMLGVEKAAIALAQK YEVDPHKASLAGLLHDYCKEVDDETFLALIDKYGLDSDLKNWDNNIWHGKVGIYKMRE DFGLEDEEVLRAIEIHTVGDKEMSGLAKVLYVADYIEEGRTFPGVIEARAVANQDLNQ AVAFETMRLVEYLAERRLTIYPQTFEAYNAFIGYLS" gene 227643..228068 /gene="yccI" /locus_tag="L27646" /db_xref="GeneID:1113836" CDS 227643..228068 /gene="yccI" /locus_tag="L27646" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266383.1" /db_xref="GI:15672209" /db_xref="GeneID:1113836" /translation="MIRKAEMKDYLDIARLSGVLGYPISEVAVKKNLARILKDADHEF LVFELGERVTAFIEAEIYAPVYAEQVMLNVLGLVVDEKNQGQGIGAQLLNALEEKAKA REIKVIRLNSGVKRHEAHQFYEHQGYTSNHSQKRFLKFL" gene 228234..228593 /gene="yccJ" /locus_tag="L28204" /db_xref="GeneID:1113837" CDS 228234..228593 /gene="yccJ" /locus_tag="L28204" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266384.1" /db_xref="GI:15672210" /db_xref="GeneID:1113837" /translation="MDSKKLLEVVVKAADDKKALDIVALDMSEVTFVADYFVIMEAMN SRQLDAIADNIAEAAELAGAKAAGHIEGDAKTGWVLIDLGDIVVSVFGHDERGHFNLE KLWSDAPMVDISGFMAE" gene 228693..229427 /gene="yccK" /locus_tag="L28696" /db_xref="GeneID:1113838" CDS 228693..229427 /gene="yccK" /locus_tag="L28696" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266385.1" /db_xref="GI:15672211" /db_xref="GeneID:1113838" /translation="MVFYEDFSRVYDQVMDQELYEQWLDFTKRHLPKETKSVFELACG SGALSVRLAQEGYKVTGLDISEEMLTLASKKARQAGYQLDFTAGDMRELSGLGKFDAV TCYSDSLCYLENLDELQATFDGVFEILNEGGTFIFDVHSTYQVDEVFPNYSYHENAED FAFLWDSFAGEVPHSIVHELSFFIQGSDGKFTRKDEVHEERTYPIDDYLARLATAGFK EAMVCADFTDEAPSEESARWFFVCKK" gene 229477..230646 /gene="yccL" /locus_tag="L29477" /db_xref="GeneID:1113839" CDS 229477..230646 /gene="yccL" /locus_tag="L29477" /note="similar to YlbM protein of Bacillus subtilis" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266386.1" /db_xref="GI:15672212" /db_xref="GeneID:1113839" /translation="MNKITGIIAEFNPFHKGHEYLLNQIEGIKIVAMSGNWMQRGEPA IFDKWTRAQMALACGADLVVELPVTVSAQAADFFASGAVDILKNLGITDLAFGSESAI DYNEIADIYEKRGEEMESYIQSLADQLSYPEKTQKMWQHFTGIEFDGNTPNHVLALAY AKAAAGKQINLQAIKRVGKFHSLELTEGFASATALRQELFSLTERQNLLTEQTNQSVS NKLVLTDLSAIKNHVPSAILAAYASPKTNWAAYFPLLQYKIRVDEHLENIFQVNQELS VRLKKAVKSAKNFDELVEQVYTKRYTKARVRRLLTYILLNIPKQFDLPEQIHVLGFSK TGQEILAQNRGKIISKIGQNPWDNLTQKADEIYQLGNVQFEEQNFGRKPIRSSIR" gene 230717..231142 /gene="ycdA" /locus_tag="L30663" /db_xref="GeneID:1113840" CDS 230717..231142 /gene="ycdA" /locus_tag="L30663" /note="similar to BacF protein from Enterococcus faecalis pheromone-responsive conjugative plasmid pPD1" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266387.1" /db_xref="GI:15672213" /db_xref="GeneID:1113840" /translation="MTEKSMKNLVKVTGILNIIGAALVVLSTIVSMASLSQALNSTGS NSFEAGFNAANSGPAMFIKIIIGFVGIATFILAIILLRQNRRFNLSNAAAILTLIAVI FAWVIIFVSLVLWIIAAVFLLRMKIKEGEENSNEISSQE" gene 231298..232014 /gene="ycdB" /locus_tag="L31280" /db_xref="GeneID:1113841" CDS 231298..232014 /gene="ycdB" /locus_tag="L31280" /note="similar to YeeN from E. coli" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266388.1" /db_xref="GI:15672214" /db_xref="GeneID:1113841" /translation="MGRKWANIVAKKTAKDGATSKVYAKFGVEIYAAAKQGEPDPESN SSLKFVIERAKQAQVPKHVIDKAIDKAKGGGDETFVQGRYEGFGPNGSMVIAETLTSN VNRTIANVRTTFHKNGGNIGAAGAVSYMFDNTGVIVFEGTDPDHIFEILLDAEVDVRD VTEEEGNIVVYTEPTDLHKGIAALKEAGITEFSTTELEMIPQSEVELSPEDLEIFEGL IDALEDDDDVQKVYHNVANL" gene 232081..232722 /gene="ycdC" /locus_tag="L32072" /db_xref="GeneID:1113842" CDS 232081..232722 /gene="ycdC" /locus_tag="L32072" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266389.1" /db_xref="GI:15672215" /db_xref="GeneID:1113842" /translation="MSSPKIDYKKSDKNYYLPKGISLIELPALNYLMIDGKGAPTSPA FQEAIQYLYATAYMISMSYRNPDFIIENFQPFVVPPLEGLWTSKNEPRAGKLDKNDFI WRLMIRMPDFVDSEIVEKAKKLVESKKGFDLSKVKFEAIQDGLCLQTIHLGSFDDEGE SFEKLFEYAKEHDLKAVHKEFHHREIYISDFRKTATEKLKTTLRIFVERGQEK" gene 232719..233378 /gene="ung" /locus_tag="L32653" /db_xref="GeneID:1113843" CDS 232719..233378 /gene="ung" /locus_tag="L32653" /EC_number="3.2.2.-" /note="Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine" /codon_start=1 /transl_table=11 /product="uracil-DNA glycosylase" /protein_id="NP_266390.1" /db_xref="GI:15672216" /db_xref="GeneID:1113843" /translation="MKKTDWSQPLRNRLAEDYFPKMIEFINQTYQEGKVYPPENQIFR AIELTPLAQTKVIIVGQDPYPQPGKAQGLAFSYPATFKVNRPDSIVNIQKELREEGFS KDDSDLTAWAEQGVLLLNAVLTVPEFASNAHAGKIWEPLTDEIIKIASDDERPKVFIL WGGFARKKAKLIDGSKHLILEAAHPSPLSASRGFFGSHPFSKTNEFLVESGQSPIDWS K" gene complement(233411..233719) /gene="ycdE" /locus_tag="L33417" /db_xref="GeneID:1113844" CDS complement(233411..233719) /gene="ycdE" /locus_tag="L33417" /note="similar to HI0107 of Haemophilus influenzae" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266391.1" /db_xref="GI:15672217" /db_xref="GeneID:1113844" /translation="MKNKEITAAIDLFSHETLKAALELGVKADKMSTVIMYPEPPAGI PTATGGEALPSDMEMILNAISNHQLTVPIAAKYSIDDYLEAINLQMNRHAHGKIVLYF" gene complement(234086..234322) /gene="ycdG" /locus_tag="L34092" /db_xref="GeneID:1113845" CDS complement(234086..234322) /gene="ycdG" /locus_tag="L34092" /note="aerobic energy metabolism; similar to several alcohol dehydrogenases" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_266392.1" /db_xref="GI:15672218" /db_xref="GeneID:1113845" /translation="MVKALQYKTFGKPDVLQLVDLPLVHPKADEVSIKVSHVGLNPMD WAIMGNPEVAPNFGVKLPQTFAYDFAGIIDEIGP" gene 234472..235017 /gene="ycdF" /locus_tag="L34460" /db_xref="GeneID:1113846" CDS 234472..235017 /gene="ycdF" /locus_tag="L34460" /note="similar to tetR-family transcription regulators" /codon_start=1 /transl_table=11 /product="transcription regulator" /protein_id="NP_266393.1" /db_xref="GI:15672219" /db_xref="GeneID:1113846" /translation="MKKTSQEKLYEAALELITAQGYENTTVLQIATKAGLTERTFFRK FKNKADIFFAGGEQYSQMLLTKMKESKANNPLAIVLESYFYAADFFDEHRERTVKRQK IIASHPDLEERELLKQSKIEELLVEYLLTAYGERSARLAVRLARAVYSVAWEEWLEND ADSLHHLLEKAIADFNELKNY" gene complement(235128..236588) /gene="ycdH" /locus_tag="L35134" /db_xref="GeneID:1113847" CDS complement(235128..236588) /gene="ycdH" /locus_tag="L35134" /note="transport and binding protein; similar to several multidrug resistance proteins" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="NP_266394.1" /db_xref="GI:15672220" /db_xref="GeneID:1113847" /translation="MNKIQEKRSIRAFMLSNVMAGLEGSIVATALPAMMAELHGIKLM SWVVTIYMLLMAVSSPIWTKLAERFEYKQMFVLGTLLFTIGSLGEGLAINMLMVIVAR ALMGLGAGVMIQLPFVIYGMMYQADERRRVIGNTVAAYSFSTIAGPIVGGLIVTLLDW RWVFFINIPIGIYMAFIVWKNFDLKTDHTKKSIDFAGSASLSIAVIAIMLHFQMMGNA VINLPLLLILLVVSFLFFIGFYFAEKRAVDPIVPLELFKNPSFIAKNIMFFMQYGFFG FYTNYLPTWGQGVMGATALVGGMVLIPSAIMLVIGTRNVNHLIQKVGEKKTIYIGFSI MVLGAIFLFSLPEHASIMMLFVATAILGTAFGIVNITLQVAVQESVAKHLIGAATAVN ALLRTMGTTLVLSGLSIALNRTFTEATAHNPKLTTTLLNQISDAKALKNIPVNLIAPL RHTLFNGMHLLALISGLLLFIALFVNWLDPWKKGLE" gene 236778..237140 /gene="rmeC" /locus_tag="L36748" /db_xref="GeneID:1113848" CDS 236778..237140 /gene="rmeC" /locus_tag="L36748" /note="MerR family of transcription regulators" /codon_start=1 /transl_table=11 /product="transcription regulator" /protein_id="NP_266395.1" /db_xref="GI:15672221" /db_xref="GeneID:1113848" /translation="MVTIATVAGRTGISAYNLRFYEKEGLISVPRTKAGIRDFDEATE SRINAIRHYRCAGLSLAQIKEVFANTDKHEMIIGVLKARKKEMEKELAELEKSMAYLD KKINIHQERLNEEATKLV" gene 237226..237402 /gene="rpsU" /locus_tag="L0398" /db_xref="GeneID:1113849" CDS 237226..237402 /gene="rpsU" /locus_tag="L0398" /note="a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S21" /protein_id="NP_266396.1" /db_xref="GI:15672222" /db_xref="GeneID:1113849" /translation="MSKTLVRKNESLDDALRRFKRSVTKAGTLQELRKREHYEKPSVK RKRKSEAARKRKKY" gene 237609..240020 /gene="ycdJ" /locus_tag="L37573" /db_xref="GeneID:1113850" CDS 237609..240020 /gene="ycdJ" /locus_tag="L37573" /note="similar to YpiL and YigE" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266397.1" /db_xref="GI:15672223" /db_xref="GeneID:1113850" /translation="MENQKKHFQMKSSSKFWLLSTGILLSLLVTSLPLAVKADENLAV TPPSQTEAVTDPTVNSSLAVSDSTTEGNAGSSQAEVPTSQVSSSALEASSPTSQASLA PSTEGSASSSGVSASMSSSSAPTSSSTSKAPSFPMDSSKAIVGVDSSLSASGTIISPA LTNGSIASQANGQDPAISSISATGSVANDITGPSTLDDVNITIKANNLVPNNFLTPDG LHWSANTEVIPITGQTTGQISTENFGQTDGPPIPATTYTMNAGDSGRITNVGRTLAGT NLDLIYKVISTDESSWQAPKESTSDCPIGLAFTGEQNIANSDGNSIVALYYGANNVNL NYQIVVHNTNFQIPVLASFITTDIDMAQGVKTNLANLLTVIPKTTNLATDSSGVIYDT TSPDTDLNGQASLPYGGYLGVGFLSNFDYDFYSPAPVRSGDSYQYSQGIRYDLFGSAL QAHLATQVRDIVYLNYYDADENNQLIVPQHQFIWFPNVSWNVPASKFPHYAYGQESQY RNGNTIIVGDYYHIQSTVTYDYYGTDGTYLGQQSTTGLYGHSYSVNVPYNFGNYYIEG SATQSGTYPKHDEVLDVYYKYVPPIVYYNTSNPYATTYYANGYEYVPNYIPPVVYYVP TYDSYGYGGGYSYSGGYGYSSGGGYSNSNGTYYPNYVPQSAYYSKEAQLVSEDNYNGG GSRNGENWWSDEGRDQVFGLGAEKFAQWGLMIGEESPVSPIVGPAITFGTELAKGKGI DDATAKSSAELGINLVVGGMATLAIAGTTALAPAIAIGVAAFIVMRGISIGYDYLYDH RRKRK" gene 240032..240631 /gene="yceA" /locus_tag="L40035" /db_xref="GeneID:1113851" CDS 240032..240631 /gene="yceA" /locus_tag="L40035" /note="similar to Y39C12A.3 protein of Caenorhabditis elegans; similar to YceC, YihA and YpiF" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266398.1" /db_xref="GI:15672224" /db_xref="GeneID:1113851" /translation="MIINFYTNEESCYGFENKTQMVFVRKNEVTSEGNQKMLWSIIGS GSLLSPFLTDFSLYLNHFSNEMNILLWLLLSSLGLCIIAFLISCVFILITDRKNEKLF KASGQNRALSQNEWRDIEKYESSNRLRLAMIWGAIVLFMSILFPLGNFYLTHNDGFIF ALIQTLIFGITVCFLLFYINHRATKNRRKILNLHNSMIT" gene 241142..241252 /gene="yceC" /locus_tag="L200011" /note="similar to ypiF and yihA; may contain frameshifts" /db_xref="GeneID:1113852" gene 241256..241705 /gene="yceD" /locus_tag="L41256" /db_xref="GeneID:1113853" CDS 241256..241705 /gene="yceD" /locus_tag="L41256" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266399.1" /db_xref="GI:15672225" /db_xref="GeneID:1113853" /translation="MKNDIDENKEKEVIQKAYHYNKFLVIWFIAVFIILVLRITKIIT DSYLAWGFGLLIVIYAISLHVQNHKLKIKSIASILVYIFNILSGLSAFLIILANQAHN LLELEIGALLALLNFILQVLAAIFALLSARKLRKLYPDIIDNRRKKI" gene 241794..242606 /gene="yceE" /locus_tag="L41779" /db_xref="GeneID:1113854" CDS 241794..242606 /gene="yceE" /locus_tag="L41779" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266400.1" /db_xref="GI:15672226" /db_xref="GeneID:1113854" /translation="MTKIKHIFSDLDGTLLDDQGKISKKTQEVIENSNLPFSLVSARA PQAMESLINQLNLKSSQVAFNGGLIFAKNEVIKANPMVHASAQELIKTIKKDYPEINL SLYSLSDWYVEKIDKDIEQEMQFTPQVPKLVDLETLITERPRLEIFKILLITPNESKL EEIKKHLEKLNFPDIIIQKTWETYLEITHLEAQKAKAVQFIAQREQLEQSELAAFGDN ENDLSMLKAVGLPIVMANASDDLKKIGKVITKSNTEDGVAYGIQKYITDSLF" gene 242796..243992 /gene="pgk" /locus_tag="L0010" /db_xref="GeneID:1113855" CDS 242796..243992 /gene="pgk" /locus_tag="L0010" /EC_number="2.7.2.3" /note="Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway" /codon_start=1 /transl_table=11 /product="phosphoglycerate kinase" /protein_id="NP_266401.1" /db_xref="GI:15672227" /db_xref="GeneID:1113855" /translation="MAKLTVKDVELKGKKVLVRVDFNVPIKDGVITNDNRITAALPTI KYILEQGGRAVLFSHLGRVKEEADKAGKSLAPVAKALSEKLGQDVVFPGTTRGAELEA AINELKDGEILLVENTRFEDIDGKKESKNDPELGKYWASLGDGIFVNDAFGTAHRAHA SNVGISANVDKAVAGFLLENEIAYIQEAVEAPERPFVAILGGSKVSDKIGVIENLLSK ADKVIIGGGMAYTFLKAQGYEIGTSLVEDDKLDLAKELLEKAAGKLILPLDHKVANAF AGYTEVKETADQNIPAGFMGLDVASKTIADYNTQLEGAKTVVWNGPVGVFENTDFQAG TVGLMEAIVKQPGVKSIIGGGDSAAAAINLGYADKFSWISTGGGASMELLEGKVLPGL AALTEK" gene 244069..245055 /gene="dhaK" /locus_tag="L44063" /db_xref="GeneID:1113856" CDS 244069..245055 /gene="dhaK" /locus_tag="L44063" /EC_number="2.7.1.2" /note="anaerobic energy metabolism; similar to Lactococcus lactis DhaL" /codon_start=1 /transl_table=11 /product="dihydroxyacetone kinase" /protein_id="NP_266402.2" /db_xref="GI:30023982" /db_xref="GeneID:1113856" /translation="MKFYNSTNEIPEEMLKGIDLTYPQLTYLPETGILYDNTYNEKTV PIISGGGSGHEPAHVGYVGSGMLAAAVTGPLFIPPKSKNILKAIRQVNSGKGVFVIIK NFEADLKEFNEAIKEARTEGIDVRYIVSHDDISVNAYNFHKRHRGVAGTILLHKILGA FAKEGGSIDEIEQLALSLSPEIYTLGVALAPVHFPHQKTSFVLAEDEVSFGIGIHGEP GYRVEKFEGSERIAIELVNKLKAEINWQKKANKNYILLVNGLGSTTLMELYSFQYDVM RLLELEGLSVKFCKVGNLMTSCDMSGISLTLCSVKDPKWLDYLNVPTGAFAW" gene complement(245056..245598) /gene="yceG" /locus_tag="L45062" /db_xref="GeneID:1113857" CDS complement(245056..245598) /gene="yceG" /locus_tag="L45062" /note="helix-turn-helix from TetR family; similar to Y07639" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266403.2" /db_xref="GI:30023983" /db_xref="GeneID:1113857" /translation="MKKSIITQKIIAKAFKDLMQSNAYHQISVSDIMQTAKIRRQTFY NYFQNQEELLSWIFENDFAELINDNSDYYGWQNELLLLLRYLDENQIFYQKIFVIDKN FEHFFLIQWENLLDKVIFDQEKKSDYHWSDLEKSFICRYNAAAICAITRESIIRGNSL EKLYSQIVNLLLAQIKIFES" gene 245692..246690 /gene="dhaL" /locus_tag="L45677" /db_xref="GeneID:1113858" CDS 245692..246690 /gene="dhaL" /locus_tag="L45677" /EC_number="2.7.1.2" /note="anaerobic energy metabolism; similar to dhaK in Lactococcus lactis" /codon_start=1 /transl_table=11 /product="dihydroxyacetone kinase" /protein_id="NP_266404.2" /db_xref="GI:30023984" /db_xref="GeneID:1113858" /translation="MSDEKIINQPQDVVSEMLDGLTYAYGDLIEKVPDFEIIQRKSPK SGKVALVSGGGSGHKPAHAGFVGEGMLSAAVCGAIFTSPTPDQIYEAIKSADEGAGVL LIIKNYLGDVMNFEMAREMAEMEEIKVEQIIVDDDIAVENSLYTQGRRGVAGTVLVHK ILGAAAHQEASLDEIKDLADKVVKNIKTIGLALSAATVPEVGKPGFVLDDNEIEYGVG IHSEPGYRREKMKTSYELATELVGKLKEEFKFEAGQKYGILVNGMGATPLMEQFIFMN DVAKLLTEENIEILFKKVGNYMTSIDMAGLSLTMIKLEDDQWLKNLNEDVKTISWG" gene 246700..247278 /gene="dhaM" /locus_tag="L46694" /db_xref="GeneID:1113859" CDS 246700..247278 /gene="dhaM" /locus_tag="L46694" /EC_number="2.7.1.2" /note="anaerobic energy metabolism; similar to the C-terminal part of dihydroxyacetone kinase from Citrobacter freundii" /codon_start=1 /transl_table=11 /product="dihydroxyacetone kinase" /protein_id="NP_266405.1" /db_xref="GI:15672231" /db_xref="GeneID:1113859" /translation="MLTIDTTIEWLGKFNEKIQENKAYLSELDGPIGDGDHGANMARG MSETMKALEVSNFGNVSEIFKKVAMTLMSKVGGASGPLYGSAFLAMSKTAIETLDTSE LIYAGLEAIQKRGKAQVGEKTMVDIWSAFLNDLQTDSASKDNLEKVVKASAGLLATKG RASYLGERSIGHIDPGTQSSAYLFETLLEVVA" gene 247275..247646 /gene="yceJ" /locus_tag="L47257" /db_xref="GeneID:1113860" CDS 247275..247646 /gene="yceJ" /locus_tag="L47257" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266406.1" /db_xref="GI:15672232" /db_xref="GeneID:1113860" /translation="MTYGIVIVSHSPEIASGLKKLIREVAKNISLTAIGGLENGEIGT SFDRVMNAIEENEADNLLTFFDLGSARMNLDLVSEMTDKELTIFNVPLIEGAYTASAL LEAGATFEAIKEQLEKMLIEK" gene 247656..248372 /gene="glpF1" /locus_tag="L47650" /db_xref="GeneID:1113861" CDS 247656..248372 /gene="glpF1" /locus_tag="L47650" /note="transport and binding protein; carbohydrates, organic alcohols and acids" /codon_start=1 /transl_table=11 /product="glycerol uptake facilitator" /protein_id="NP_266407.1" /db_xref="GI:15672233" /db_xref="GeneID:1113861" /translation="MTLQILGEFLGTFILVLLGNGVVAANVLGKTKSENAGWVTIAIG WGLAVAVAVWVVGFFSPAYLNPALVIGFLVLGKIKIGLAFAFIVAEFLGAMLGAVAVW LHYYPHWEETKDSSLILASFATAPAIRYSWSNFLGEAFDGALLMILIMAMGHYRLEGG FGPIIVGFLIMAVGFSLGPTTGYAMNPARDLGPRIMHALLPIKNKGTSGWGYAWIPAT GSIVGAVIAGLLYQWMLTLH" gene complement(248411..249790) /gene="pepDA" /locus_tag="L48417" /db_xref="GeneID:1113862" CDS complement(248411..249790) /gene="pepDA" /locus_tag="L48417" /note="degradation of proteins, peptides, and glycopeptides; similar to dipeptidase PepD of Lactobacillus helveticus" /codon_start=1 /transl_table=11 /product="dipeptidase" /protein_id="NP_266408.1" /db_xref="GI:15672234" /db_xref="GeneID:1113862" /translation="MTCTTFLVGKKASLDGTTLIARNEDGGDKPNPQRFVVINPENQP KHYRSITTACEFDLPENPLSYTSTPDADSSYGIWAAAGINSENVAMTATETSTTNSRI LGLDPYVETGLGEEDFTTITLPYIQSAREGVERMGQLLEEYGTYESNGMAFSDKDEIW WLETLGGHQWAAIRIPDDAYVIAPNRLNIDWYDFESSDTIYSTGLKEFIDKNKLNPDF DGYNLRHIFGSSTIKDTRYNNPRAWYVQNYFSPETTGNDDPFNQDLPFICHANRKISI EEIKFVMSSHYENTAYDPYSTTSSAAEQKLIRPIGLNRNLELHVLQIRDNIDKKLAGI HWLAFGPNSFNSLVPFYARVSDTPTCYRDTKADFDPTKMYWLTTMTAVLGDSNFQGYV DKRDNFDLNTMAKLRALQNETDKVSDQSLEAVNEKLAQIALTAQTELLGKMVISGSNH MKLRFDFND" gene 249968..250615 /gene="ycfA" /locus_tag="L49937" /db_xref="GeneID:1113863" CDS 249968..250615 /gene="ycfA" /locus_tag="L49937" /note="TetR/AcrR family of transcription regulators" /codon_start=1 /transl_table=11 /product="transcription regulator" /protein_id="NP_266409.1" /db_xref="GI:15672235" /db_xref="GeneID:1113863" /translation="MSEEQTLNEVYADTLKKMENLTEKQKRVLQASLELFASQGFEAT TSQQIAKRAGVSVGSVYHTFPTKQAILVAVLAPIFEGTMDTVANQFNDNTFGKGFESV EELVKVTIADRFYFADKNINVIRLMLGQMLVNSVFVEDLKKFFEQQAKQLVLPTIVRL QAEQKIKNLPIEKILQILFYPLATYIGKRVLGINNMSLEEEIEFATEITIKTLKV" gene 250701..251447 /gene="ycfB" /locus_tag="L50637" /db_xref="GeneID:1113864" CDS 250701..251447 /gene="ycfB" /locus_tag="L50637" /note="transport and binding protein" /codon_start=1 /transl_table=11 /product="ABC transporter ATP binding protein" /protein_id="NP_266410.1" /db_xref="GI:15672236" /db_xref="GeneID:1113864" /translation="MKSPIAINDISVKFGDKAILDHLSYEFESGKIICLIGPSGAGKS TFIKAIVGMQKLDSGNVKILERKIPDREVLGKLGYMAQEDALFKELTGKQNLEFFGSL QGIKKKDLQGKLDKAAATVNLTKQLNQSISNYSGGMQRRLSLAIALQTDAPILLLDEP TVGIDPELRQEIWEELRNQANQGKTILITTHVMDEAERCDVVLMLRNGKFIAEGSPKE IKEKYQVASVEEAFIVAGKNLELQNKGAAK" gene 251444..252586 /gene="ycfC" /locus_tag="L51437" /db_xref="GeneID:1113865" CDS 251444..252586 /gene="ycfC" /locus_tag="L51437" /note="transport and binding protein" /codon_start=1 /transl_table=11 /product="ABC transporter permease protein" /protein_id="NP_266411.1" /db_xref="GI:15672237" /db_xref="GeneID:1113865" /translation="MRTLAIFKRIMLQRRGDPRTLAMMFLAPIFILTLMYFLFQVPSN NAYRVGLKSDNTELTRALKDMPNDKAHLKVISVSENNRSTMNEKDLSAIVSISGKNID VSYANQSNGTSSAIKLLLTQVIQESQVKATKEETKQALQNLISKLPQTSGQSFSTNFR VDTEQYKVTSHYLYGDPSSTNATFDDLAPILVGAFAFFLVLLISGISLVNERTSGMLG RMLVTPVKRTEIVTGYTLSYGILAMIQTALMVVFTYWILGVHHNGNIGWVFVINFFIA IIALLFGLLLSTLAKTEFQFVQMIPLAIVPQFLFSGLIPVDTMPVILQAIAHCIPVYY GISAMQEVVKRGVGFSGIWFDLLIMLLFAALLYLANVLALKNVRRT" gene 252684..253853 /gene="ycfD" /locus_tag="L52686" /db_xref="GeneID:1113866" CDS 252684..253853 /gene="ycfD" /locus_tag="L52686" /note="UPF0064 family; similar to YwbD of Bacillus subtilis" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266412.1" /db_xref="GI:15672238" /db_xref="GeneID:1113866" /translation="MKKITVRTKAAKKLRAGYPLLVAEDLNSPFLEDDFAQFFDEKGQ ALGTGYLSKQNKGVGWLLDSSSVKIDHHFYVEKFVNARALRANFYQDELTNAFRLFNG EGDGLGGLTIDFYNGFAVFSWYNQFIYSQKKAIVKAFQVVFPDIKGAYEKLRFSEAAL ESQHIFGQEAAEPLLVMENGVTYATYLNEGLMTGIFLDQKNVRGALAGGLSTGKTLLN MFSYTGAFSVAAAFGGSSQTTSVDLAKRSLDKTREQFLVNGIEPESQKIYVMDVFGYF NYAKKKELTYDMIVLDPPSFARNGKKTFSVAKNYGDLVKEAVEILENNGTLIASTNAA NVSDKKFRQMIEEALKNKGVKFTVFQEEKLPADFHIADSFPEGNYLKVLFIKIKK" gene 254043..255965 /gene="fbp" /locus_tag="L54021" /db_xref="GeneID:1113867" CDS 254043..255965 /gene="fbp" /locus_tag="L54021" /EC_number="3.1.3.11" /note="gluconeogenesis; similar to fructose-1,6-bisphosphatase of Bacillus subtilis" /codon_start=1 /transl_table=11 /product="fructose-1,6-bisphosphatase" /protein_id="NP_266413.1" /db_xref="GI:15672239" /db_xref="GeneID:1113867" /translation="MDKKYYQLLKNQFSSKEAVLTEIINLSAICELPKATEHFMSDVH GEYDAFNHVLRNGSGSIKEKLRDCFPEFSATEISSLATLIYYPQEKLDSECQLKETEE FENYCRINLVYLLKTVKFVGQKYTRSKVRKAFPEKFRYILEELINEVDSTTDKRDYFD SILSQLQNLGEFTRLIVALADTIRRLTVDHLHVVGDIYDRGPYPDKIIDRLIKMPSVD VQWGNHDIVWMAAFSGSPLAMMNVIRICARYGNLDILEESYGINLRMILEYAERYYEP SEAFQPRLVEGVRLSDDEKALLNKLQEATAILQFKLESQLIKRRPDFQLEHRDVLHFI DFSEKTIKLGTEVYELTDFQAPTVNPEQPESLTAEEEKIISHLLNNFRSSDKLKRHVE FLQEKGAMYLSYNGNLLIHGCLPLHENGDFKSFTVNKEAHAGRDLLDFFDQEVRKCLA HPENSTDLATDLMWYLWVGECSSLFGKTAMTTFERYYIKDKKTHVEKKNPYYQLREEA EIIRKILENFGLDEGGHLVNGHTPIKEKNGENPIKADGKLIVIDGGFAKAYQKETGIA GYTILYNSFGIQLVAHQPFSTVKEAVEKGTDIISLKCLVAEVDQRKRVKDTNVGQTLL SEIADLEVLFEHYEEF" gene complement(256042..256130) /locus_tag="L200138" /db_xref="GeneID:1113595" tRNA complement(256042..256130) /locus_tag="L200138" /product="tRNA-Leu" /db_xref="GeneID:1113595" gene complement(256200..257471) /gene="ycfF" /locus_tag="L56208" /db_xref="GeneID:1113868" CDS complement(256200..257471) /gene="ycfF" /locus_tag="L56208" /note="similar to YtfP of Bacillus subtilis" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266414.1" /db_xref="GI:15672240" /db_xref="GeneID:1113868" /translation="MTKSAKTFDVIVVGAGPSGMMAAISAAQNGAKVALIDKNKKVGK KLLMTGGGRCNVTNARSVDEILTNVPGNGRFLHSAFSQFSNLDIIEFFESNGVKLKEE DHGRMFPITDKSKTIVDALFNKILSLHVSYFPSQAVDKLLIENGAVIGLETDSESFLS PTIILSTGGRAYPSTGSTGDGYRLARSAGHSISQLYATESALISDEPFILDKSLQGIS LREIKLSVLNSKGKAIISHQHDLLFTHFGISGPAAMRCSSFINQLLAKGEKMVTVSLD QFPEKKLGSLKNELTSLSKTDKSIKNAFSGLTQERMLLFILEKAGIDPSLSAKTLSEQ QIDKIASLFKNWQITISKTLPIEKSFVTGGGVSLKEINPKSMESKQTQGLFMTGELLD INGYTGGYNITCAFVTGFVAGKHAAQIASYF" gene 257612..258439 /gene="ycfG" /locus_tag="L57608" /db_xref="GeneID:1113869" CDS 257612..258439 /gene="ycfG" /locus_tag="L57608" /note="UPF0031 family" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266415.1" /db_xref="GI:15672241" /db_xref="GeneID:1113869" /translation="MIELTDEILAKVIKKRKKASYKGTYGRLLVIGGNRQYGGAAILV TTSAVYSGAGLVSVALAKENHSALQARLPEAMTLDFDDLIKLREVAKAADVIVIGPGL GLERLDLLTEVLNLLTENQKLVIDGSALTLFAREHLDLPFPENTVFTPHEMELERLSG LKIGQQTKEEVQDFVNQLGAIVVAKSSETRIFAPNRESFILKIGSPAQATGGMGDTLA GMVGGFLAQFHGETEEVVAAATYLHSLIASVLARKTYVVLPSRLIEEIPLFMKKYEC" gene 258588..259001 /gene="ycfH" /locus_tag="L58584" /db_xref="GeneID:1113870" CDS 258588..259001 /gene="ycfH" /locus_tag="L58584" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266416.1" /db_xref="GI:15672242" /db_xref="GeneID:1113870" /translation="MNAIELVQGAMKKAEKIRPKVGGFPYLAECMREAGVLKNVWTLP VGQSTFWTSAGVISVTNSPMVSGFHEVPVFDQEALIKALRADQAGQTTFPEFLSATWE AGVISYEADFSERKVTYLGSQGESYVEAYPAVEIH" gene 259172..261007 /gene="ycfI" /locus_tag="L59135" /db_xref="GeneID:1113871" CDS 259172..261007 /gene="ycfI" /locus_tag="L59135" /note="transport and binding protein; contains two ATP binding domains" /codon_start=1 /transl_table=11 /product="ABC transporter ATP binding protein" /protein_id="NP_266417.1" /db_xref="GI:15672243" /db_xref="GeneID:1113871" /translation="MLTIGRRYLNFWPVFWALFLLVIQVVTNLWLPTITADIINKGIG QSDMKYIWFMGLIMLFVSLASWLSAIGNVYFASKQSQGLGLKLRHDLFKKVLFMDERN FQEFGDATLITRTTNDVTQLQNVFQTMLRMMLMAPMMLIGSIFMAWKLSHDLLLVFLI ALPILTLAVVINIAISMPRFRSMQTKVDKINLIFQQGLTGVRVIRAFRRDQYEIDKFD EANRDLTHTSQVVLTTIAMLMPIMTVILSFTNIGIVWFGAHLISKNMMEMGSLVAFLT YATQILMSFMQLSAVAVMVPRAQVSAVRVREILESKDKITDENSSISVEALKRQRLSS DGNDKLSESNSVRNSLALNHVSFKFDEAKRQALSDLSVNVAAGQTLAIIGGTGSGKST ILNLIARLIDPTNGSVTIDGTDIRQISQYDLHEKVSFTQQKAQLFSGTVRSNLQFGKS DATDEEMWQALEIAQAADFVREQGGLELAVEQNGANFSGGQKQRISIARTLIKEAEIY LFDDSFSALDFATDRQLRTAINHSEKHKNKIKVIVAQRIATVMSADQILVLENGIAVG LGTHESLAKSCPQYQETMQSQLSDDDLVKMGVSIAHLTARGGDDQ" gene 261004..261699 /gene="ycgA" /locus_tag="L61006" /db_xref="GeneID:1113872" CDS 261004..261699 /gene="ycgA" /locus_tag="L61006" /note="transport and binding protein" /codon_start=1 /transl_table=11 /product="ABC transporter ATP binding protein" /protein_id="NP_266418.1" /db_xref="GI:15672244" /db_xref="GeneID:1113872" /translation="MMRGNYLNRGGKGADRFQKGRRAQNFFPTIIRLFKYMRRDLWGL LFSILIASLSVILSVQAPKILGNATTVIFDGVTKSLKNHTAIQIDMTKVESILLYVMV IYLISFISGILQQSIMTRISQRTVYTLRREFKNKMKKLPVSYYDSHSNGDIMSRMIND MDNISGTLNQTLIQLITSLLQFVGTIYFMLTISWQLALVAFITVPLAMITVRIVAPLS QKFFAEQQKIWDY" gene 261696..262880 /gene="ycgB" /locus_tag="L61680" /db_xref="GeneID:1113873" CDS 261696..262880 /gene="ycgB" /locus_tag="L61680" /note="transport and binding protein" /codon_start=1 /transl_table=11 /product="ABC transporter ATP binding protein" /protein_id="NP_266419.1" /db_xref="GI:15672245" /db_xref="GeneID:1113873" /translation="MNDQIEENYAGHAVIKTFNHEASAEKEFAKRNDNFYKSAWKAQF VSTLIYPTMRFVNNLDYLAMAVIGGLKVISGTVNLGDVQAMLQYTNQFAQPITNISNM LNTIQATVASAERIFEVLDEKEMTDGIPVSEKVADESSKKAVSNLGATDKTDFINFDQ VAFSYNENQSLMTDVNFSVEVGQMIAIVGPTGAGKTTMINLLERFYDVTSGKILLEGK DIREIDREQLRGRMAMVLQETWLFSGTIMDNLQYGRLEATQEEVIQAAKMAHADEFIT TLPQGYQTLLNEAASNISQGQRQLLTIARAFLANPEILILDEATSSVDTRTERLIQSA MNRLLKGRTSFVVAHRLSTIRDANQILVMENGNIVEMGNHESLLKENGLYASLYNSQF AK" gene 262977..263630 /gene="ycgC" /locus_tag="L62955" /db_xref="GeneID:1113874" CDS 262977..263630 /gene="ycgC" /locus_tag="L62955" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266420.1" /db_xref="GI:15672246" /db_xref="GeneID:1113874" /translation="MFKKSDKKIKENDQESNAAFEEFFNQVLKKMPARSAKIISSSLT VSKAKAEQFLASNSQKFDHLFDEFLVGVDSQTRRKCHETIHFATLTAAIVGFSPIPFS DAVLLVPIQLTMMMRLYKIFGASWSEALAKGITKELVVVGLGRSLVGNVLKFVPAVGT IAGGAINATVATTITEALGWVTVKMLNDGEDIFNNVLTFEGQFKGLVSKLQKANKKK" gene complement(263676..264695) /gene="ycgD" /locus_tag="L63684" /db_xref="GeneID:1113875" CDS complement(263676..264695) /gene="ycgD" /locus_tag="L63684" /note="aerobic energy metabolism" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_266421.2" /db_xref="GI:30023985" /db_xref="GeneID:1113875" /translation="MIKKLNIAYVGFGKSTNRYHIPYVKERENIVIKRIVNRTLGKRP EQAELEANGTLFSTDIADIINDDSIDLVVIVTPAFAHYDYAKELLSAGKNVLCDKPLV ETLEQAKELVALAKEKNLFFMPFQNRRFDSDFLTVKKVIEQGYLGDLVDITVNMDHFR PNDASQGGNFDGAWYGHGVHLVDQMVSLFGAPKEVQYDIRATRDYDSVDDYFSVNLLY PNLRATVAATEVAALPHPKWLVYGTRGTFIKMDVDQQENDLKVGMFPGDEGFGQDSPA DFGQLTYFNQNGDRIVKHIPTVAGDYGRVYDSAYESIINGADKLVSDEQILAVIKTLE NGFSK" gene complement(265021..265497) /gene="ycgE" /locus_tag="L65029" /db_xref="GeneID:1113876" CDS complement(265021..265497) /gene="ycgE" /locus_tag="L65029" /note="catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2" /codon_start=1 /transl_table=11 /product="S-ribosylhomocysteinase" /protein_id="NP_266422.1" /db_xref="GI:15672248" /db_xref="GeneID:1113876" /translation="MAEVESFQLDHTKVLAPYVRLIGSETGPKGDVITNFDVRFVQPN ANAIGMAALHTIEHSMASLIRDRIDGMIDFSPFGCQTGFHMIMWGEHSSEEIAKVIKS SLEELASDEFGWDNVPGVAEKECGNYRNHSLFGAKEWSKKILSEGISTDPYERKVI" gene 265711..266175 /gene="ycgF" /locus_tag="L65707" /db_xref="GeneID:1113877" CDS 265711..266175 /gene="ycgF" /locus_tag="L65707" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266423.1" /db_xref="GI:15672249" /db_xref="GeneID:1113877" /translation="MNIREVEKSSFSIIGKEGLGKAQEADIWIPPLWQEATNAFEEII HLIKQPLTIWGAMSDESGQFKPWNNGGLYLAGVEVENSAQKPENWTKWTLPGFRYFVV ETTTYEMNKTYSDMWNYLTQNDLKIVGAVQEHQSISAENPEELELWFPIERI" gene 266240..267085 /gene="ycgG" /locus_tag="L66233" /db_xref="GeneID:1113878" CDS 266240..267085 /gene="ycgG" /locus_tag="L66233" /note="aerobic energy metabolism; aldo/keto reductase family" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_266424.1" /db_xref="GI:15672250" /db_xref="GeneID:1113878" /translation="MTLTDTYTLNNGIKIPKVGFGTWQSASGEEAYNAVKAALEAGYR HIDTAAVYKNEESVGQAIADSGIPREELFVTTKLWGVGTTEDAAKALDESLKKLGLDY VDLYLIHWPNPKAFRPDFETRNLAVWKAMEAGVKAGKIRAIGVSNFHPRHLKPLLKFA EIKPAVNQIMVNPSDQQEEIVSFNVDNNILTEAYSPLGTGKIFEVPELADLASKYNKS IAQVVLRWSLHKGYLPLPKSVTPARIKENAEIFDFDLSIEDIAFIDSLHGKAGLAKNP DEVDF" gene 267248..267763 /gene="ycgH" /locus_tag="L67226" /db_xref="GeneID:1113879" CDS 267248..267763 /gene="ycgH" /locus_tag="L67226" /note="similar to nicotinamidase or pyrazinamidase from Mycobacterium smegmatis" /codon_start=1 /transl_table=11 /product="amidase" /protein_id="NP_266425.1" /db_xref="GI:15672251" /db_xref="GeneID:1113879" /translation="MMKKALVLVDFQNDFIDGSLGTKEAQAIIPNVIEKLSQYSKENR LATQDTHFEDYLTTQEGKNLPVTHCQNGTFGWEIRKEAQVGFAKIFEKTTFGSRTLAE FIRDENYDEVELVGICTDICVVSNALLIKAYAPEVKISVDASCCAGVSPEKHLAALET MRSCQIEITNA" gene 267882..268430 /gene="ycgI" /locus_tag="L67872" /db_xref="GeneID:1113880" CDS 267882..268430 /gene="ycgI" /locus_tag="L67872" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266426.1" /db_xref="GI:15672252" /db_xref="GeneID:1113880" /translation="MDYHQLFSRLNEKLSEENLQLHLHCVGGFVLEYYGMKATEDIDA FYESTEKVEKIIQEIGGEFHVGTSNEPWLSQAVGEVMSHSKTDETIIFVESHLTVGLS SLESILIDKIQAGRTKDVPDIAKIMKKLKIESPDPLLERFKHTDGSADPAVILEAFSL AYGEEALKNYLRKNPKILRLLQ" gene 268427..268711 /gene="ycgJ" /locus_tag="L68363" /db_xref="GeneID:1113881" CDS 268427..268711 /gene="ycgJ" /locus_tag="L68363" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266427.1" /db_xref="GI:15672253" /db_xref="GeneID:1113881" /translation="MTWIEYLLNAAQKSKWNLELWVRYLNKVIQRDKILLSKTDIDYL MSSEELTSFQRVFLELALEKETTPWEMTVGMSEPTQSIHLQSVLKELKKE" gene complement(268750..270069) /gene="acmA" /locus_tag="L68758" /db_xref="GeneID:1113882" CDS complement(268750..270069) /gene="acmA" /locus_tag="L68758" /EC_number="3.5.1.28" /experiment="experimental evidence, no additional details recorded" /note="cell wall hydrolase; muramidase-2 like protein in Enterococcus faecalis; in Enterococcus faecalis a mutant in this gene has no effect on virulence in mouse models; Listeria monocytogenes MurA in involved in general autolysis; contains an N-terminal muramid" /codon_start=1 /transl_table=11 /product="autolysin" /protein_id="NP_266428.1" /db_xref="GI:15672254" /db_xref="GeneID:1113882" /translation="MPVSRIKVKNRHLKKKAKKPLAFYKPATKFAGAVLIAGTLTTTH ELLLQQTSPMVQAATNSTEAFIESIAASAKPVADSNGLYPSVMIAQAILESNWGSSQL SRAPYYNLFGIQGTYQGKSVVFKTQEYLNGKWVTKDMPFRVYPSFNQSFQDNAYVLKT TNFGNGPYYAKAWRANAATYQAATAALTGKYATDPNYGASLNRIISQYNLTRFDGASS AGTSNSGGSTATNTNNNSNTSSTTYTVKSGDTLWGISQKYGISVAQIQSANNLKSTVI YIGQKLVLTTSSSSSNTNSSTSSGNSAGTTTPTTSVTPAKPASQTTIKVKSGDTLWGL SVKYKTTIAQLKSWNHLNSDTIFIGQNLIVSQSAGSSSSSTGSSSASTSSTSNSSAAS NTSIHKVVKGDTLWGLSQKSGSPIASIKAWNHLSSDTILIGQYLRIK" gene 270413..272656 /gene="nrdD" /locus_tag="L70400" /db_xref="GeneID:1113883" CDS 270413..272656 /gene="nrdD" /locus_tag="L70400" /EC_number="1.17.4.2" /note="Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates" /codon_start=1 /transl_table=11 /product="anaerobic ribonucleoside triphosphate reductase" /protein_id="NP_266429.1" /db_xref="GI:15672255" /db_xref="GeneID:1113883" /translation="MKSEVKYQDVTLEEINVIKRDGRSVKFNSEKIFDALTKAAKKVE LTDMSVLSELTDRVVSEIFTRFSENVKIYEIQSIVEQELLESGETQLAEEYISYRANR DLARTKATDINFTIEKLINRDQTVVNENANKDSNVFNTQRDLTAGAVSKAIGLKLLPP HVANAHQKGDIHYHDLDYSPFTTMANCCLIDFKNMFENGFKLGNAQVDSPKSIQTATA QASQIIANVASSQYGGCSFDRADEVLAPYAKLNYKKHLKDAQKWIDGAEKQEAYAREK TAKDIYDAMQSLEYEINTLFTSNGQTPFVTVGFGLGDDWYAREIQKAILNVRIGGLGS EHRTAIFPKLIFTLKRGLNLEVGTPNYDIKELALECSTKRMYPDILSYDKIVELTGSF KASMGCRSFLQGWKDENGNDVTAGRNNLGVVTVNLPRIALEAAGNKEKFWEIFNERIE IAHDALAFRVERAKEAQPKNAPILFMNGALGRLDAEGSVDELYNKERATVSLGYIGLY EVATTFYGPTWENNPEAKAFTIEIVKRMHEDCEDWSKASGYHYSVYSTPSESLTDRFC RMDKEKFGSVADITDKDYYTNSFHYDVRKNPTPFEKLEFEKDYPVYANGGFIHYCEYP VLQQNPKALEAVWDFAYDRIGYLGTNAPIDHCYACGFEGDFAATERGFKCPQCGNDDP KTCDVVKRTCGYLGNPQARPMVHGRHKEISSRVKHMNGSVGALNDGNLIDSVEVDEAK SKYFAEK" gene 272670..273269 /gene="nrdG" /locus_tag="L72609" /db_xref="GeneID:1113884" CDS 272670..273269 /gene="nrdG" /locus_tag="L72609" /note="salvage of nucleosides and nucleotides" /codon_start=1 /transl_table=11 /product="anaerobic ribonucleoside-triphosphate reductase activating protein" /protein_id="NP_266430.1" /db_xref="GI:15672256" /db_xref="GeneID:1113884" /translation="MNNPKPGEWRADELSQNYIADYKPFNFVDGEGVRCSLYVSGCMF HCEGCYNQATWSFRYGTPYTKELEDKIMADLAQPYVQGLTLLGGEPFLNTTFLIPLLK RIRRELPDKDIWSWTGYTWEEMLLETDDKLEILDLLDILVDGRFELSKKNLMLQFRGS SNQRIIDVPKSRKQGQVVIWEKLNDGEKTFEQIHKEKLI" gene complement(273378..273884) /gene="ychC" /locus_tag="L73386" /db_xref="GeneID:1113885" CDS complement(273378..273884) /gene="ychC" /locus_tag="L73386" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266431.1" /db_xref="GI:15672257" /db_xref="GeneID:1113885" /translation="MKTLLVLCEVKYWHDFREGLAKVGVSFLGFDKKKPNRFEIDQLV AKADFVVMRNRNVAHHSVQFAKEACKATDTPFWISSNFGLETIIKQLSQTFPDESFES TDENKKSKRKIENRVIQKQNYLAESAQSKESQNYLKGKKKHLPLKSALKDFKITDDEP DFTKLFKK" gene 274176..275444 /gene="eno" /locus_tag="L0008" /db_xref="GeneID:1113886" CDS 274176..275444 /gene="eno" /locus_tag="L0008" /EC_number="4.2.1.11" /note="enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis" /codon_start=1 /transl_table=11 /product="phosphopyruvate hydratase" /protein_id="NP_266432.1" /db_xref="GI:15672258" /db_xref="GeneID:1113886" /translation="MTVTIENIHAREIFDSRGNPTVEVDVRLTDGTLGRAAVPSGAST GDREAVELRDGGDRLQGKGVSKAVANVNGEIYEALKGQSPFNQAKLDHLMIELDGTKN KSRLGANAILGVSMAISRAAANSEKIPLYRYLGGVDLELPQPFFNVINGGVHADSGID VQEFLITPVKRESFRDGLEKIANIYHTLKKILADKGLETAVGDEGGFAPKLGSTENAI ATLYQAIESAGYVPGEEIAIAIDPASSEFYDDKEKVYRFEGQKLTSKELLTYYENLVE KYPALISIEDGFSEHDWEGFAAQTKAQGQKIQLVGDDIFVTNPEIFKEGIKKGVANAI LIKLNQIGTVTEAIEAISLARKAGYKTMISHRSGETVDSYIADFAVAMHAGQIKTGSM ARSERVEKYNQFLRIEEELGKDVALASFPG" gene complement(275512..275599) /locus_tag="L200137" /db_xref="GeneID:1113594" tRNA complement(275512..275599) /locus_tag="L200137" /product="tRNA-Ser" /db_xref="GeneID:1113594" gene 275743..276576 /gene="cbiO" /locus_tag="L75718" /db_xref="GeneID:1113887" CDS 275743..276576 /gene="cbiO" /locus_tag="L75718" /note="with CbiNQ forms the ABC transporter for cobalt import; Lactococcus has two adjacent copies of this gene" /codon_start=1 /transl_table=11 /product="cobalt transporter ATP-binding subunit" /protein_id="NP_266433.1" /db_xref="GI:15672259" /db_xref="GeneID:1113887" /translation="MNKILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGS GKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKIGMVFQNPDNQFVGATVEDD VAFGMENQGIPREEMIKRVDEALLAVNMLDFKTREPARLSGGQKQRVAVAGIIALRPE IIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEI IKEAAPSELFATSEDMVEIGLDVPFSSNLMKDLRKNGFDLPEKYLSEDELVELLADKL R" gene 276762..277628 /gene="cbiO" /locus_tag="L76755" /db_xref="GeneID:1113888" CDS 276762..277628 /gene="cbiO" /locus_tag="L76755" /note="with CbiNQ forms the ABC transporter for cobalt import; Lactococcus has two adjacent copies of this gene" /codon_start=1 /transl_table=11 /product="cobalt transporter ATP-binding subunit" /protein_id="NP_266434.1" /db_xref="GI:15672260" /db_xref="GeneID:1113888" /translation="MIKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSG KSTLLQHLNGLLQPTQGTVRVGDIVVTSTSKQKEIKPVRKKVGVVFQFPESQLFEETV LKDVAFGPQNFGISKEEAEKIAAEKLEMVGLSKEFWEKSPFELSGGQMRRVAIAGILA MEPEVLVLDEPTAGLDPKARIEMMKLFESIHQTGQTVVLVTHLMDDVADYADYVYLLE KGHIISCGTPSDVFQEVDFLKAHELGVPKATHFADQLQKTGVYTFEKLPITRAELVNL LTSLSVKSGGEN" gene 277628..278428 /gene="ychF" /locus_tag="L77627" /db_xref="GeneID:1113889" CDS 277628..278428 /gene="ychF" /locus_tag="L77627" /note="transport and binding protein" /codon_start=1 /transl_table=11 /product="ABC transporter permease protein" /protein_id="NP_266435.1" /db_xref="GI:15672261" /db_xref="GeneID:1113889" /translation="MQNMLMGRYIPGDSIIHRMDPRSKLLVMIAFVVIIFLAHDWLGY LLLVLYTLAGVLLSKISVSYFLKGLRPMIGLILFTVIFQMLFTNGQHVIFSLWFIKIS TESLINAVYIFFRFVLIIFMSTILTLTTPPLTLADGIEKGLGPLKKIKVPVHELGLML SISLRFIPTLMDDTTMIMNAQKARGMDFGEGNLLKKIKSVIPILIPLFVSSFRRADDL AVAMESRGYQGGDGRTKYRQLKWKMRDSLLVVSIIIMTILLILWSKVS" gene 278452..279063 /gene="ychG" /locus_tag="L78434" /db_xref="GeneID:1113890" CDS 278452..279063 /gene="ychG" /locus_tag="L78434" /note="similar to bacterocin transport accessory protein Bta of Streptococcus pneumoniae; maybe a part of trasport system ychDEF" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266436.1" /db_xref="GI:15672262" /db_xref="GeneID:1113890" /translation="MITLNVNSLENAEIFWKELGLEDEVALNETYDPNPETLAISVET IDEIHDKIIELGLPVSPITPAVDGRFMFSFIAPEDNTFIVIGEWVERPYTGEMRTEFF ENVKGLIPLAPERLSELTEGQFVLFGRVTCPWTRRFVKALPDYADKMIYYVDTENTDL NPELQAIRKAHEVETVPTFMKRSADGTFIKFDKKKESLSEFIK" gene 279273..280043 /gene="ychH" /locus_tag="L79267" /db_xref="GeneID:1113891" CDS 279273..280043 /gene="ychH" /locus_tag="L79267" /note="similar to acetyltransferases" /codon_start=1 /transl_table=11 /product="acetyltransferase" /protein_id="NP_266437.1" /db_xref="GI:15672263" /db_xref="GeneID:1113891" /translation="MEAQKLSAQEIIQFIGNAEKKTRVKVTLSGMPSFKAAGFLAENG RPNFKALANKGIQVLGDFHTHYSLKIIIGDWQAVRPLLSGLTENKDYTLELEGRNSAV PLLDTREINARIEPGAIIRDQVTIGDSAVIMMGAIINIGAEIGEGTMIDMGAILGGRA TVGKNSHIGAGAVLAGVIEPASAEPVRVGDNVLVGANAVVIEGVQVGSGSVVAAGAIV TQDVPENVVVAGVPARIIKEIDEKTQQKTALEDALRNL" gene 280180..281334 /gene="yciA" /locus_tag="L80177" /db_xref="GeneID:1113892" CDS 280180..281334 /gene="yciA" /locus_tag="L80177" /note="energy metabolism, amino acids and amines; similar to several hippurate hydrolases and amino acid amidohydrolases; may be a peptidase." /codon_start=1 /transl_table=11 /product="amino acid amidohydrolase" /protein_id="NP_266438.1" /db_xref="GI:15672264" /db_xref="GeneID:1113892" /translation="MINLIEIRRQLHQIPEIGLEEYETQKYLLAIIQELTQNKPFIQV RTWQTGILVYLAGSQSQKTIGWRTDIDGLPIEELTDLPYASKNGRMHACGHDIHMTVA LGLLEKMSESQPRDNLLFLFQPAEENEAGGKLMYDARAFENWLPDEFYGLHVRPDLKV GDIATNQHTLFAGTCEVELSFIGTGGHAAFPHTANDALVAAAYFITQVQTIVSRNVDP LASAVVTFGKMEAGTTNNIIAERAFLHGTIRSLTQEVNELTQKRLRELANGIAQSFNM EIELKLKQGGYLPVENHPKLAKELMEFFKKETKANLIDIAPAMTGEDFGYLLSKIPGV MFWLGIDSDAPLHSQKMNPDEHVLNFSVDTISQFLQFKVNRLSEGEKTIN" gene 281456..282574 /gene="xynD" /locus_tag="L81453" /db_xref="GeneID:1113893" CDS 281456..282574 /gene="xynD" /locus_tag="L81453" /codon_start=1 /transl_table=11 /product="endo-1,4-beta-xylanase D" /protein_id="NP_266439.1" /db_xref="GI:15672265" /db_xref="GeneID:1113893" /translation="MKQRRLKSKGAKKAFWKLTLLIGALLIVVAGVGTYYYDQGVQKQ KIAYEKQVDEARNAKDKAYDSRKANDIEQAHKLIDKLHVKDKTSLDKSMSQLTNYLSE IDKVNQIVAKAHENISEEGIKSSEEALELLKAPYEKSDKEALAKQVNADKQILIERQK EAELIANVQNQYANKKLIALTFDDGPNPNTTPQLLKIFSDAQVPATFFALGKQAQACP QIIKEEADRGNEVASHTWDHKDLVTLSPDQQKQEIESANQLINKITGKNVTLFRPPYG SYNKSVLSQTNLSAVNWTVDTNDWRYRTSAPVVQNVSTYAHDGAIILMHDIHQWSVDA VPQIIKNLKAQGYTFVTVSTLLTVQDGGAKAQQVYFGR" gene 282716..282789 /locus_tag="L200089" /db_xref="GeneID:1113546" tRNA 282716..282789 /locus_tag="L200089" /product="tRNA-Arg" /db_xref="GeneID:1113546" gene 283094..283167 /locus_tag="L200090" /db_xref="GeneID:1113547" tRNA 283094..283167 /locus_tag="L200090" /product="tRNA-Pro" /db_xref="GeneID:1113547" gene 283758..284369 /gene="rpsD" /locus_tag="L0381" /db_xref="GeneID:1113894" CDS 283758..284369 /gene="rpsD" /locus_tag="L0381" /note="primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S4" /protein_id="NP_266440.1" /db_xref="GI:15672266" /db_xref="GeneID:1113894" /translation="MSRYTGPSWKQSRRYGISLSGSGKEIARRNYVPGQHGPNNRSKL SEYGLQLAEKQKLRFSYGLSERQFRNLYIAATKVKEGTVGFNFMTLLEQRLDNVVFRL GLATTRRQARQFVNHGHILVDGKRVDIPSFRVQPGQVISVREKSMKVPAILEAVEATK GRANFVSFDADKLEGTLVRLPERDEINPEINEALIVEFYNKMM" gene 284496..286634 /gene="yciC" /locus_tag="L84502" /db_xref="GeneID:1113895" CDS 284496..286634 /gene="yciC" /locus_tag="L84502" /note="similar to ydcI of Bacillus subtilis; contains has S1 motif; similar to tex (toxin expression regulator) genes" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266441.1" /db_xref="GI:15672267" /db_xref="GeneID:1113895" /translation="MENVKKIAELLNIKNSQVEKVLELTAEGNTVPFIARYRKEATGS LDEVEIKKIIDEDNLLTKLSERKTAVLSKIEELGKLTDSLKAQILAAEKLTEVEDLYL PYKEKRRTKATIAKENGLFPLAQLIVKNSANLEEEAEKFVNENFTSPQKALEGAVDIL SEAISEDARLRSWLTGEIKNNSLLTSSLKKDAVDEKQVFQMYYEFSEKVSELPNYRVL ALNRGEKLGILSVKFENNEDKILRYFAARFAAQNNPMMQVAIKDAVKKKLIPAMERSI RTELTEKAEASAIEVFGENLKNLLLVAPLKGRVVMGFDPAYRTGAKLAIVDETGKLLM TTVIYPVKPANAGQIAQAKKDLAKFIREYGVNMIAIGNGTASRESESFVAEVLKENNF SDVYYVIVSESGASVYSASELAREEFPELTVEKRSAISIARRLQDPLAELVKIEPKAI GVGQYQHDVSEKKLTENLDFVVETVVNQVGVNVNTASPSLLSHVAGLNKSLAQNVVKY REENGALKTRAELKKVPRLGAKAFEQAAGFLRIPEGKNFLDNTGVHPESYKVTEQLLA EISADKPVSNEELLTKLSSVNIPEMAEKLGLGQETLTDIINDLQKPGRDLRDSFDAPI LRQDVLSAGDLQIGQQLEGVVRNVVDFGAFIDIGIKNDGLAHVSDLSKSFVKNPSDVV AVGQIVTVWVKSLDLQRGKINLTLVNPREK" gene 286731..287174 /gene="yciD" /locus_tag="L86677" /db_xref="GeneID:1113896" CDS 286731..287174 /gene="yciD" /locus_tag="L86677" /note="similar to adenylate kinase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266442.1" /db_xref="GI:15672268" /db_xref="GeneID:1113896" /translation="MLTNQELTAKVKEISLTYFKQSFDHEAKWNQRLRTTGGRFFPKD LHLDFNPKMAELKDFEGVILHELTHYHLYRSKRGYKHRDADFKRLLSQVGGLRYAPSV IDKKIKYYYSCQNCGQLYPRQRKIDTKKYRCGKCRGKLILKTSGN" gene 287447..288505 /gene="add" /locus_tag="L87453" /db_xref="GeneID:1113897" CDS 287447..288505 /gene="add" /locus_tag="L87453" /EC_number="3.5.4.4" /note="catalyzes the formation of inosine from adenosine" /codon_start=1 /transl_table=11 /product="adenosine deaminase" /protein_id="NP_266443.1" /db_xref="GI:15672269" /db_xref="GeneID:1113897" /translation="MKKKREKLVLKSEIIAQMPKVELHCHLDGSLSLSVIKELAKNAG IHMTMSDEEILEKAQAPENTKNLLEYLQRFDFVLPLLQTYKNLELAAYDVVRQAANDN IKYIEIRFAPSQHLLENLTLEEAVEAVIAGLSRAENDFDIRANALVCGLKQEPIQKLQ KLLPLFDKIPDEHLVGFDMAGDELNYPQEKFVDLIHDIKIKGVNVTLHAGECPACEKN ILDSIAMGASRIGHGIMTKNLSEAEQKMMIEKQIVLEMAPTSNFQTKAVTELAQYPFK ELYDKGIHVTLNTDNRMVSATNLSKEYEKISAWYPDFSLSDFEKINHYAIDGAFIGQE EKEELHQRFTKEYKKISE" gene complement(288537..288755) /gene="yciF" /locus_tag="L88546" /db_xref="GeneID:1113898" CDS complement(288537..288755) /gene="yciF" /locus_tag="L88546" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266444.1" /db_xref="GI:15672270" /db_xref="GeneID:1113898" /translation="MAGTTIVTYSSNHNGSINFYKDPNHYQDERYLKDSAWVKEESRK LLDSSQTLAIPTSFDEQAAQIISKIEIK" gene complement(288792..289205) /gene="yciG" /locus_tag="L88801" /db_xref="GeneID:1113899" CDS complement(288792..289205) /gene="yciG" /locus_tag="L88801" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266445.1" /db_xref="GI:15672271" /db_xref="GeneID:1113899" /translation="MENKSYEKTILWSATFLSLFALAACSNSKSSENQTKKENTSSSK VTSSSKTSNGKNSATHSTNTSPSSSQANTNNSEKVQKSSSPLSGYSAEQVEYARVTET LLSYYKYDYQPVSISVTKNGANHQVFPFSGSVVVP" gene complement(289409..291091) /gene="yciH" /locus_tag="L89418" /db_xref="GeneID:1113900" CDS complement(289409..291091) /gene="yciH" /locus_tag="L89418" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266446.1" /db_xref="GI:15672272" /db_xref="GeneID:1113900" /translation="MPKQLKIKADEVAVYAIGGLGEIGKNTYGVEYKDEIIIIDAGIK FPEDDLLGVDYVIPDYTYIVENIDRIKGLFITHGHEDHIGGIPFLLKQANIPIYAGPL SLALIRGKLEEHGLLRDAKLYEIHADSVIKFNHLSLDFFRTTHSIPEPLGIVVNTPQG KIVATGDFKFDFTPVGEPADLHRMAELGSEGVLLLLSDSTNAEIPTFSHSEKVVGASI MKIFERIEGRIIFASFASNIFRLQQAVDGAVKTGRKIVVFGRSMEKAIVNGLELGYIK APKGTFIEPNEVNQYASHELLIMCTGSQGEPMAALSRIANGMHRHITLQMGDTVVFSS NAIPGNTHGVNQLINKIAEAGVEVIYGKMNNIHTSGHGGQQEQKLMLRLIKPKYFMPV HGEYRMLKIHAGLAQDTGVPKENCFIQENGDVLALTADSARYADHFPASDTYVDGSGI GDVGNAVLHDRHELSEDGIVLAVATVDFEKKTVLAGPDMLSRGFIYMRESGDLIRSGQ RVLFNAIREAMHEENANEASVARAMREALSPFLYKQTERSPLVVPMIMTPDE" gene complement(291264..291494) /gene="ycjA" /locus_tag="L91273" /db_xref="GeneID:1113901" CDS complement(291264..291494) /gene="ycjA" /locus_tag="L91273" /note="similar to ykzG Bacillus subtilis" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266447.1" /db_xref="GI:15672273" /db_xref="GeneID:1113901" /translation="MIFKVFYQKDNTRSPRRETTEALYLDLDVATKEEGVILARELLA KNTAYHVEFIDSLSDESVEYEKETGVFEITSF" gene 291804..292529 /gene="ycjB" /locus_tag="L91807" /db_xref="GeneID:1113902" CDS 291804..292529 /gene="ycjB" /locus_tag="L91807" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266448.1" /db_xref="GI:15672274" /db_xref="GeneID:1113902" /translation="MKILAFDSSSKALSVAVVADGILLGEVTLNLKKNHSTTLMTSID FLMAQVGLEAKELDRIAVAQGPGSYTGLRLSATVGKTLAFSLNKELVGLSSLLAIANR VQDKNAYVLPIIDARRGNAYAALYKNGQQIIADQHCNFSEFLADLSEKVSSFEQIIFT GETDNFVEAIQNAGFSEEQIISDSLEKLPSAYEIAKIAEKLAPENVHAFVPNYLKKVE AEEKWLESHEKAENTPDDYVQRV" gene 292483..293052 /gene="ycjC" /locus_tag="L92414" /db_xref="GeneID:1113903" CDS 292483..293052 /gene="ycjC" /locus_tag="L92414" /note="ribosomal proteins; synthesis and modification; similar to several putative ribosomal-protein-alanine N-acetyltransferases" /codon_start=1 /transl_table=11 /product="acetyltransferase" /protein_id="NP_266449.1" /db_xref="GI:15672275" /db_xref="GeneID:1113903" /translation="MKKLKTLLTTTFKGFSGKKFNPRRYLEMADIELEHDREGVHYRL ADRVDIVALLAIERDVYNGDIPWTFSHFEHEIVKNDEAFFIVAEISGSVIGFIGTRIN HHGQDAHITNLAVFKAFQGQQIASTLIEQLIVLMSALGKNEMTLEVRRDNTKAQGLYR RQGFVTDKLLPEYYEDGADAIWMIKKLKK" gene 293057..293527 /gene="ycjD" /locus_tag="L93051" /db_xref="GeneID:1113904" CDS 293057..293527 /gene="ycjD" /locus_tag="L93051" /note="ribosomal proteins; synthesis and modification; similar to different ribosomal-protein-alanine acetyltransferases" /codon_start=1 /transl_table=11 /product="acetyltransferase" /protein_id="NP_266450.1" /db_xref="GI:15672276" /db_xref="GeneID:1113904" /translation="MKLKHLSYFEEKLEDKKYFPTIENLSAQIYELLSLAYEESPWTR AYILADINNENSDYFFLEEEGQIGGLLAISTIMDELEITNIAIHPDFQGQGLASFLLT EVSTFSGTLFLEVRKSNLAAQKCYEKFGFKIYHTRKNYYDKPLEDALLMRKEQF" gene 293530..294570 /gene="gcp" /locus_tag="L93500" /gene_synonym="gcp" /db_xref="GeneID:1113905" CDS 293530..294570 /gene="gcp" /locus_tag="L93500" /gene_synonym="gcp" /note="in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity" /codon_start=1 /transl_table=11 /product="putative DNA-binding/iron metalloprotein/AP endonuclease" /protein_id="NP_266451.1" /db_xref="GI:15672277" /db_xref="GeneID:1113905" /translation="MKDNYILAFETSCDETSVAILKNGNELLCNIIASQINSHKRFGG VVPEIASRHHVEQITVCIEAALEEAEISADQLTAVAVTEGPGLNGALLVGIMAAKTFA WANHLPLIPVNHMAGHLMAASLVDTIEYPAMALLVSGGHSELVYVEKEGSYKKVGETR DDAAGEAYDKVGRVMGLTYPSGKVIDELAHKGADTYNFPRAMMNTHEVEFSFSGLKSA FINLVHNENQKGNDVIADDLENLAASFQAAVVDVLMAKTKLAMEKYPVKTLIIGGGVS ANQGLRERLSAEITDEKLIIPPLRLCGDNAGMIAAAAYIEWKKGLENVQAGLDLNAKP SLVFEDIEEGEV" gene 294570..294770 /gene="ycjF" /locus_tag="L94552" /db_xref="GeneID:1113906" CDS 294570..294770 /gene="ycjF" /locus_tag="L94552" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266452.1" /db_xref="GI:15672278" /db_xref="GeneID:1113906" /translation="MMKLIGKLQNGMTFTEEFDGVNDFLALQQSDYNAIADEIEVVEV KIADEVLDFKGNMGQLYYELMK" gene complement(294964..295101) /gene="ycjG" /locus_tag="L94973" /db_xref="GeneID:1113907" CDS complement(294964..295101) /gene="ycjG" /locus_tag="L94973" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266453.1" /db_xref="GI:15672279" /db_xref="GeneID:1113907" /translation="MTTAYLLLGNDKSLETPAGLPIGKIFAYKEMEKLWLKKSSSDSW Q" gene complement(295201..295989) /gene="ycjH" /locus_tag="L95210" /db_xref="GeneID:1113908" CDS complement(295201..295989) /gene="ycjH" /locus_tag="L95210" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266454.1" /db_xref="GI:15672280" /db_xref="GeneID:1113908" /translation="MKNLTFTVSMSDLGLEIRLPSTAFLRIFDQNNARFDLQNDELFF LLKKGQIKMIANDLKLIPKLEFDKVVILNMAAYDLELEYLTQYLVNLAEEAGIILRDK AEPIKITSNIEKACATSADEFLTALTAFGIKLEKKKAFSPKAQHRWKKGLSEVEFFVN RSDSKATIIWEKSNQLVIKAGAKISESGGMKSDGTPGLAYRFTQTLREEQKANWDAKT FTTTEDIVLKSVNEVGHFLYFAGTNSWLQLVDKEGRTIHELSVV" gene 296289..297338 /gene="ycjI" /locus_tag="L96217" /db_xref="GeneID:1113909" CDS 296289..297338 /gene="ycjI" /locus_tag="L96217" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266455.1" /db_xref="GI:15672281" /db_xref="GeneID:1113909" /translation="MKKTSKKVIGLTASALIAVSLLAACGNSSSASKSDSKTISNLKI SFIPSKNPDDITTATKPIANILKSELKKQGYTVKNIDTSVGTNYQAVGEGLDAGSVDV GYGMSATTYAMYQDGSTPLLMATRKGLSNDGSDSAKYWNEHKPTTKTDKEVTSYSSLI IAGNSPMGKKLAKEANDGTLTWKDLNDAKWGLESTSSAAGYMYPSQWLTENFKHSIRD LKNTVTMDSYDSAMAQLASGQIDVMPEYADARMDDAAKWTTTFGAKESIWDDTNVIGV TPAIANDGIMVSEKSKIMTADFKKALSAAIKDMAKTDEGKKVIAIYSHDGYVDSTKAD YKTAIKVANSMSKAN" gene 297457..298197 /gene="phnC" /locus_tag="L97415" /db_xref="GeneID:1113910" CDS 297457..298197 /gene="phnC" /locus_tag="L97415" /note="transport and binding protein, anions" /codon_start=1 /transl_table=11 /product="phosphonate ABC transporter ATP-binding protein" /protein_id="NP_266456.1" /db_xref="GI:15672282" /db_xref="GeneID:1113910" /translation="MIKFENVSKIYPNGTKGLTDVNLQINQGEFVAIIGTSGAGKSTL IRCVNGLNDITSGSLIVNDTEVSKLKGKELRKFRRHVGMIFQSYNLVPRVTVLKNVMF ARVPDMSLFKVIFGLFSKEDKLVALDSLNKVGILDKAYIRADQLSGGQQQRVSLARAL SQESEILLADEPVSALDPVTAKEVMDDFKRINEEFNKTILLNIHHVELALEYASRIIA VKKGKIVYDGPSQEVTKEILDEVYRKEA" gene 298198..299010 /gene="phnB" /locus_tag="L98204" /db_xref="GeneID:1113911" CDS 298198..299010 /gene="phnB" /locus_tag="L98204" /note="transport and binding protein, anions" /codon_start=1 /transl_table=11 /product="phosphonate ABC transporter permease protein" /protein_id="NP_266457.1" /db_xref="GI:15672283" /db_xref="GeneID:1113911" /translation="MYDKIFKPKKIKLITGEVVEEKVSRTWLTWLIIILLIAFSVILT NFDFSALSRSGLFFQKLASMIPPNWAYFHKVLPPLLDTIKMSFFASLLGAILSVPFAI LAANNILKNRFGNGIIRLIFMLARTLPTLVLALIATYIFGLGTFAGVVAIFVFTFSFI GKQLFEVIETVDMGPFEAAEALGVSPLKAFFIAVFPQVLPTYLSTALYAFEGNVRYAA ILGYVGAGGIGNILNDRVNFRDFSSVGMILISILATVMIIDSISALIRKKIA" gene 299025..299834 /gene="phnE" /locus_tag="L99004" /db_xref="GeneID:1113912" CDS 299025..299834 /gene="phnE" /locus_tag="L99004" /note="transport and binding protein, anions" /codon_start=1 /transl_table=11 /product="phosphonate ABC transporter permease protein" /protein_id="NP_266458.1" /db_xref="GI:15672284" /db_xref="GeneID:1113912" /translation="MNSQIIEEYNHRPKNWFYYLLIFIVLLAVSIWSTSVVHYHGVSE HGALIAKNIFTGIFHPDTSLMFNLTETGLPYLLLQTFAIGLLGTLVGAIVAIPLSFLA ATNLVPNWLAYLIRFVLMAIRTIPSFVYALLFIPVVGLGSSAGVMALGFESIGMIAKL FIEAIEDLDMGVIEAMDAAGATTFQKIRFGVLPQLLPDLYSILLYRLDMNLRDAAILG LVGAGGIGAPLSFAMSGYKWSAVGAILLGLLVLIILVELISSRIRKKLAKG" gene 299840..301399 /gene="ycjM" /locus_tag="L99798" /db_xref="GeneID:1113913" CDS 299840..301399 /gene="ycjM" /locus_tag="L99798" /note="nucleotide and nucleoside interconversions; similar to nucleotide phosphodiesterases and UDP-sugar hydrolases" /codon_start=1 /transl_table=11 /product="phosphatase" /protein_id="NP_266459.1" /db_xref="GI:15672285" /db_xref="GeneID:1113913" /translation="MKIRILETSDLHGFVLPTNFTEREMNLPFSMAKAKSKIDELTAV AQEQGEIIVKIENGDLLQGSPLAYYLAKKSSRGIKDLVNVTNSFGYDVGLLGNHEFNY GIDYLKSYVNQVNYPILAANVLNNEGQPAFGPAYKIIEAQGVKIGIVGFLTQYIPHWE KPSIIKDLTFQSILTTAKDILPDLRQSVDLLIVAYHGGFERDLQTGLPTESLTGENEA YQLVEEYKDYIDALVTGHQHREIADHLFGVPVIQPGYRGAFVGEIELELDNHKKVVAS NARLHKTENCKVSSEVNQLISVVSEEAEDWLDQPMGEVHGEMIIRDPMTARLIEHPYI ELINKIQMEATGTEISGTALFNNEAKGFAKEISMRSILTNYIYPNTLAVLRVTGADLK AALERTAEHLELDKSGEIVFSPRFIEPKPEYYNYDMYEGVEYAINLQKEIGQRIVRLN FKGHQVKDDEILEIVVNQYRAVGGGNYPMFSADKIVREITVDMTELIADYLKKHPIIE ASVNHNFTVLK" gene 301726..302208 /gene="tpx" /locus_tag="L101699" /db_xref="GeneID:1113914" CDS 301726..302208 /gene="tpx" /locus_tag="L101699" /EC_number="1.11.1.-" /note="adaptations and atypical conditions; antioxidant activity; may remove peroidases or hydrogen peroxide; TPX/TAGD family" /codon_start=1 /transl_table=11 /product="thiol peroxidase" /protein_id="NP_266460.1" /db_xref="GI:15672286" /db_xref="GeneID:1113914" /translation="MPMNITSHGEKIATLNPPISGDAPDFELTDLKGNKIKLSKLEKP VLISVFPDINTRVCSLQTKHFNLEAAKHSEIDFLSISNNTADEQKNWCATEGVDMTIL ADDGTFGKAYGLILNGGPLEGRLARSVFVVKNGQIVYSEVLSELSDEPNYEKALAATK" gene 302381..304921 /gene="pepN" /locus_tag="L102360" /db_xref="GeneID:1113915" CDS 302381..304921 /gene="pepN" /locus_tag="L102360" /experiment="experimental evidence, no additional details recorded" /note="evidence experimental PMID:1352755; degradation of proteins, peptides, and glycopeptides" /codon_start=1 /transl_table=11 /product="aminopeptidase N" /protein_id="NP_266461.1" /db_xref="GI:15672287" /db_xref="GeneID:1113915" /translation="MAVKRLIETFVPENYKIFLDIDRKTKKIKGQVAITGEAKDSVIA FHAKGLHFSKVRAFSVDTNFIENEEDEEIVVKIGETGRVTVSFEYEAELTDNMMGIYP SYYEVNGEKKMLIGTQFESHFARQAFPSIDEPEAKATFDLSVKFDEEEGDIIVSNMPE LLNINGIHVFERTVKMSSYLLAFVFGELQFKKGKTKSGVEVGAFATKDHSEAALDFPL DIAIRSIEFYEDYYKTPYPLPHSWHIALPDFSAGAMENWGCITYREVCMLVDPENATI QSKQYVATVIAHELAHQWFGDLVTMQWWDDLWLNESFANNMEYVCMDALEPSWNVWES FSISEANMALNRDATDGVQSVHVEVTHPDEIGTLFDPAIVYAKGSRLMVMLRKWLGDE DFAAGLALYFKRHQYGNTVGDNLWDALAEVSGKDVAAFMHSWVNQPGYPVVTAEVIDD TLVLSQKQFFVGEGADKGRLWNVPLNTNWSGLPDLLSSEKVEIPGFAALKAKNDGKAL FLNDANMAHYIIDYKGQLLTDLLSEVETLENVTKFQILQDRKLLAKAGVISYADVVNI LPAFTNEESYLVNTGLSQLISELELFVDEDSETEKAFQSLVGKLFAKNYARLGWDKVA GESAGDESLRGIVLSKTLYAENADAKAKASQIFAAHKENLAGIPADIRPIVLNNEIKT TNSAELVKTYRETYVKTSLQEFKRELEGAVALIKDEKVIAELLESFKNADIVKPQDIA FSWFYLLRNDFSQDAAWAWEKANWAFLEEKLGGDMSYDKFVIYPGNTFKTADKLAEYK AFFEPKLENQGLKRSIEMAIKQITARVALIDSQKADVDKSIKEISEKL" gene complement(304960..306153) /gene="napC" /locus_tag="L104969" /db_xref="GeneID:1113916" CDS complement(304960..306153) /gene="napC" /locus_tag="L104969" /note="multidrug resistance; similar to NapC protein from Enterococcus hirae; similar to many tetracycline resistance efflux proteins of class H" /codon_start=1 /transl_table=11 /product="multidrug-efflux transporter" /protein_id="NP_266462.1" /db_xref="GI:15672288" /db_xref="GeneID:1113916" /translation="MKINKHALTFGLITTFLTGLGFTIISPVVPFMVAPFANAHDQAL IVTSLMAIYALCTFFAAPALGSLSDRFGRKPILLISLAGSALGYLIFGLAGSLWMLFL GRIIDGLTGGNIVTLFAYFADITDEENRTKVFGWTAAAVGVGTISGPTVGGLLAHFGN SVPFYFGALISIANLLYGAFVMNESLPETHRTRNFSLKQLNPFTQLFQLLRMKNLNRL LFAGILLWLPNGALQAIISQFSLDSFAWTPVLIGLAISIMGLMDILTQIFIMPRLLKL ANEDKLIRLALVCEIIAYLLFALSAFSKMWPFFILAMFIFAFGDSIFGTAFNGKLSKS ATSSEQGKLQGGSQALQALTRVIGPLIGGQIYISLGHFAPALMGFIFLIIALLVLSKT KSDQE" gene complement(306480..306959) /gene="napB" /locus_tag="L106489" /db_xref="GeneID:1113917" CDS complement(306480..306959) /gene="napB" /locus_tag="L106489" /note="similar to NapB protein of Enterococcus hirae" /codon_start=1 /transl_table=11 /product="MarR family transcriptional regulator" /protein_id="NP_266463.1" /db_xref="GI:15672289" /db_xref="GeneID:1113917" /translation="MIMTNLQQNQEQIMTSLTDLFNKIDAYYKPQMEAEFSNISLSEI ETIEFIAKTPYPNVTKLAHHLYMTRGAASKIAKKLLKKNLVESYQIPQNKKEIYFRLT KEGQEINDRHESLHQKFSEKDQVIFDELTDESVSNILKFLNKYNNHLDSAIRNNIEK" gene complement(306956..308233) /gene="ydaE" /locus_tag="L106965" /db_xref="GeneID:1113918" CDS complement(306956..308233) /gene="ydaE" /locus_tag="L106965" /note="transort and binding protein, cations; similar to several cation efflux system proteins" /codon_start=1 /transl_table=11 /product="cation transporter" /protein_id="NP_266464.1" /db_xref="GI:15672290" /db_xref="GeneID:1113918" /translation="MAASSTNNLKLAEKGVWVSIIAYIVLSIGQIAFAAIVHSSALQA NGFNNVTDIMGNIAILIGLRLARIPADSDHVYGHWKIESIASLISSFIMFFVGFEVLR ETVMTLLSGKEEAIDPLGALVGLFSAFVMLGVYLYNRALAKKTNSQALSAASKDNLSD AVTSIGTVVAILASSVGWEWLDTAMAVVICGFILKTAYDIFHESVFSLSDGFDENLVE EYREAICLVPKVKGVKLVRGRSYGSNIFLDVVVEMSPDLSVFESHEATEFIEKMLIDN YGVYDVDVHVEPAALPEEEHYASRSLELLAKEEQFLNLENLDKLTDSTFQEILADGKI ISASDKLIDFAKITDENSVSKNNNSKNSLTSLSVIPLAINHYSSSQVSKKTFILTYDY WKNEQNFVVTSIWRRNDYWRCIYRQTTLKREEK" gene 308509..308859 /gene="ydaF" /locus_tag="L108503" /db_xref="GeneID:1113919" CDS 308509..308859 /gene="ydaF" /locus_tag="L108503" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266465.1" /db_xref="GI:15672291" /db_xref="GeneID:1113919" /translation="MAEIPKEMLRAQTNVILLNVLKQGDNYVYGIIKQVKEASNGEME LNEATLYTIFKRLEKDGIISSYWGDESQGGRRKYYRLTEIGHENMRLAFESWSRVDEI IENLEANKKDESNK" gene 309171..310892 /gene="ydaG" /locus_tag="L109162" /db_xref="GeneID:1113920" CDS 309171..310892 /gene="ydaG" /locus_tag="L109162" /note="transport and binding protein" /codon_start=1 /transl_table=11 /product="ABC transporter ATP binding and permease protein" /protein_id="NP_266466.1" /db_xref="GI:15672292" /db_xref="GeneID:1113920" /translation="MKHKWVALFSIVSTFIYAGVQLYQPQIMKRIMTVMSSTTYSRHQ MADKVSGYGVELLVVAGIGIIFAIFSTLSAARIAQEIGADVREATYKKINTFSYENIE KFNAGNLVVRMTNDVTQVQNLMMMVFQILMRIPVLLIGAVVLSITTLPRLWWITVLLI VLIVLVTAVLMGRMGPHFMAFQKLMDRINAIAKQNLRGSRVVKSFVQEKNQIKDFDET SDELYDHNWAVGKLFSAMIPLFTVIAQGVIWLAIYFVSTFVTESTTVAQDSIGGIATF MTYMGMIMFAIIMGGMISMFASRGMVSIGRINEVLNTDPAMKFDENAKDEVLSGSVKF DHVSFSYPNDEEPTLKDISFEVEPGQMVGIVGATGAGKSTLAQLIPRLFDPTEGTVSV GGKDLKTVSRGTLKKNISIVLQKAILFSGTIAGNIKQGKADATDEEMTRAARIAQAAE FITTKDGQYDSEVEERGNNFSGGQKQRLSITRGVVKNPNVLILDDSTSALDAKSEKLV QEALNKDLKDTTTIIIAQKISSVVHADNILVLDQGKLVGQGTHQELVAENKIYQEIYD TQKAQED" gene 310896..312890 /gene="ydbA" /locus_tag="L110899" /db_xref="GeneID:1113921" CDS 310896..312890 /gene="ydbA" /locus_tag="L110899" /note="transport and binding protein" /codon_start=1 /transl_table=11 /product="ABC transporter ATP binding and permease protein" /protein_id="NP_266467.1" /db_xref="GI:15672293" /db_xref="GeneID:1113921" /translation="MENTKSTRKMSDTTRAIRFFYLYLKRYKLQFAVIMIFIILATWL QVVSPSLLGDAITNLTKYVTDFFTHQHAGQSQDALQQIAQQLSQQMHQTVDWHNVPEV VKSLPQAAQDQITANLPKGTTLETLKTVATSHAASTSTFMKGMWQLLAVYVATGVSML IYTLLFSRIVAHSTNRMRKGLFGKLERLTISYFDRHQDGDILARFTSDLDNIQNTLNQ ALVSVISNAAVFVGVIIQIFNKDVTFAWLTVAASPVAILSAVIIIRQSKKATDKQQEE VSQLNAYMDEKISGQKAIIVEGLQEDSINGFLEHNENVKKRTFAAQAWSGMIFPLMNG FQLLSIAIVIFGGTAYVLNDDSMSIATGLGLLVAFVQYVQSYYNPIMQISSNFGQLQL AITGATRLNVMFDEPEEVRPENGKKFDTIKDGIQIENLDFEYLPGKPVLKKVNIDVKK GQMVALVGPTGSGKTTVMNLMNRFYDVNGGAIKFDGTDIREFDLDSLRSNVGIVLQES VLFDGTIADNIKFGKPNATQEEIETVAKTTHIHDFIDSLPDKYETHVSDDESVFSVGQ KQQISIARTILTNPELLILDEATSNVDTVTEQQIQWAMEAAIAGRTSFVIAHRLKTIL NADKIVVLKDGEVIEEGNHHELVAQGGFYSELYHNQFVFE" gene 313067..314332 /gene="murA1" /locus_tag="L113067" /db_xref="GeneID:1113922" CDS 313067..314332 /gene="murA1" /locus_tag="L113067" /EC_number="2.5.1.7" /function="cell wall formation; adds enolpyruval to UDP-N-acetylglucosamine; first committed step in peptidoglycan biosynthesis" /note="adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active" /codon_start=1 /transl_table=11 /product="UDP-N-acetylglucosamine 1-carboxyvinyltransferase" /protein_id="NP_266468.1" /db_xref="GI:15672294" /db_xref="GeneID:1113922" /translation="MKKIVINGGKRISGTIPISGAKNSVVALIPATILANDVVTLEGV PDISDVASLVEIMEIMGAKIERNLEEGRLVIDTRSVVSRPLPYGKINSLRASYYFNGA LLGRFGQATVGLPGGCDLGPRPTDLHDKAFKALGAKKIQEEEAEHLEVIGDSLVGTTI YMDVVSVGATINTMLAASRAKGLTIIENAAREPEIIDVATLINNMGAQVRGAGTDIIR ITGVDEMHGAQHTVIPDRIEAGTYLALAAAMGDGVIIENVIYEHLESFIAKLEEMGVG LTIREDSIEVHKSENLKSVNITSVPYPGFATDLQQPITPLLLKAKGRGSIVDTIYQKR VNHVPELARMGANISVLDDRIIYDAPNELTGSCVQATDLRAGAALVTAGIIASGTTKI SNIEFILRGYDHIIEKLTAVGVDIQLIEE" gene 314378..314596 /gene="ydbC" /locus_tag="L114363" /db_xref="GeneID:1113923" CDS 314378..314596 /gene="ydbC" /locus_tag="L114363" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266469.1" /db_xref="GI:15672295" /db_xref="GeneID:1113923" /translation="MADKLKFEIIEELIVLSENAKGWRKELNRVSWNDAEPKYDIRTW SPDHEKMGKGITLSEEEFGVLLKELGNK" gene complement(314623..314961) /gene="ydbD" /locus_tag="L114632" /db_xref="GeneID:1113924" CDS complement(314623..314961) /gene="ydbD" /locus_tag="L114632" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266470.2" /db_xref="GI:30023986" /db_xref="GeneID:1113924" /translation="MALYPLIVFIALVFIFKFFRLRHLTNRKLKIPDVFTIFLILGMQ IFSKNVTSISIIPYYLLIISGLALVLLLLDLLYYKQFTYRRFLKLWWRLTFFITLIIY LILIVITFTH" gene complement(315003..315551) /gene="ydbE" /locus_tag="L1011" /db_xref="GeneID:1113925" CDS complement(315003..315551) /gene="ydbE" /locus_tag="L1011" /note="similar to BioY protein precursor of Bacillus sphaericus" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266471.1" /db_xref="GI:15672297" /db_xref="GeneID:1113925" /translation="MQNTKLYSLTLIALGAAIIAVLSPLSIPIGIVPVTLQTLAVGLV ATVLKARETFFAILLYLLLGFIGIPVFTGGTSGIAVLFGPTGGFLIAFLIMGTLISFG LHQINYKTIPAFIINIVGHLLMLVIGTLWLKFFTNVDWSLALKLGFTPFVIVEIIKAV LVTIFGLALIRALSHTNKYFTN" gene complement(315662..316138) /gene="ydbF" /locus_tag="L115671" /db_xref="GeneID:1113926" CDS complement(315662..316138) /gene="ydbF" /locus_tag="L115671" /note="regulatory funcion; similar to EbsC regulator of Enterococcus faecalis" /codon_start=1 /transl_table=11 /product="transcription regulator" /protein_id="NP_266472.1" /db_xref="GI:15672298" /db_xref="GeneID:1113926" /translation="MSKKQKLKKTLVEQILDKAKIEHTGLAINALESNSLPVDISRSD IYKTLALIGDKTGPVIGILPLTEHLSEKKLAKVSGNKKVSMIPQKDLQKTTGYIHGAN NPVGIWQNKKFPIFIDSIALEHDFIVCSAGEVGRSIKIAPKVLADFVHAQFVEIRE" gene complement(316202..316777) /gene="ydbH" /locus_tag="L116212" /db_xref="GeneID:1113927" CDS complement(316202..316777) /gene="ydbH" /locus_tag="L116212" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266473.1" /db_xref="GI:15672299" /db_xref="GeneID:1113927" /translation="MCASKRSFFMSNSKFNVRLLTEIAFMAALAFIISLIPNTVYGWI IVEIACIPILILSFRRGLTAGLVGGLIWGILSMITGHAYILTLSQAFLEYLIAPVSLG IAGLFRQKTASLKLVPVLLGTFVAVLLKYFFHFIAGIIFWSQYAWKGWGAVAYSLAVN GISAILTAIAAFVILIIFVKKFPKLFIYSNY" gene 317479..318339 /gene="plpA" /locus_tag="L117444" /db_xref="GeneID:1113928" CDS 317479..318339 /gene="plpA" /locus_tag="L117444" /note="membranes, lipoproteins, and porins; attached to the outer membrance by a lipid anchor; NLPA family of lipoproteins" /codon_start=1 /transl_table=11 /product="outer membrane lipoprotein precursor" /protein_id="NP_266474.1" /db_xref="GI:15672300" /db_xref="GeneID:1113928" /translation="MNPRNRNILIVVIVVVIVAIAAFFGFNHKSGESKTANKTVNIGI MTGTKEDDAIWSTVSKTAKDKYGITLKFTHFTDYTQPNTALKNGDIDLNAFQHYAFLN AWNKANDGDLKAIGNTTISPIRLYSKKITSLSQIKSGDTIAVPNDASNESRALYVLKN AGLIGLSVSGDTLATVKDINSNPKNLVIKELDAAQTPRALDSITAAVINDDFATTAKL TVEESIYTEPVNKDSEQWINIIVANKKDANNKIYKEVVKAYQTEATKKAIEKAYPDKR KIAAWGLKLD" gene 318483..319343 /gene="plpB" /locus_tag="L118475" /db_xref="GeneID:1113929" CDS 318483..319343 /gene="plpB" /locus_tag="L118475" /note="membranes, lipoproteins, and porins; attached to the outer membrance by a lipid anchor; NLPA family of lipoproteins" /codon_start=1 /transl_table=11 /product="outer membrane lipoprotein precursor" /protein_id="NP_266475.1" /db_xref="GI:15672301" /db_xref="GeneID:1113929" /translation="MNPRNRNIIIGIIVVVIVAIAAFIGFGQKSQANKTVNKTVKIGI MTGTKEDDSIWQTVSKTAKDKYGITLKFTHFTDYTQPNTALKNGDIDLNAFQHYAFLK AWNKANNGNLVAIGDTVISPISVYSKQLKNISDIKEGGTIAVPNDASNESRALYVLKS AGLIKLDVSGQTLATVKDITSNPKNLVIKELDASQTARALDSVDAAVINNNYAVTAGL KKSDAIFTEPVNKDSQQWINIIVANKKDENNTVYKDVVKAYETEATKKTIAKAYPDKS TIPAWGLKLK" gene 319460..320320 /gene="plpC" /locus_tag="L119452" /db_xref="GeneID:1113930" CDS 319460..320320 /gene="plpC" /locus_tag="L119452" /note="membranes, lipoproteins, and porins; attached to the outer membrance by a lipid anchor; NLPA family of lipoproteins" /codon_start=1 /transl_table=11 /product="outer membrane lipoprotein precursor" /protein_id="NP_266476.1" /db_xref="GI:15672302" /db_xref="GeneID:1113930" /translation="MNPKNRNIIVALAVIIVVALVAFFSLNHQASKKSTAQKTVKVGI MSGDKQDQEVWKSVAKTAKEKYDLKLKFVYFSDYNQPNEALLSGDIDVNAFQSYNYVK TWNKAHKSDIVAVGNTYITPMHIYSKEVSKLSDLKEGSTVAIPNDASNESRALFVLQS AGLIKLTTSDSSKLVGLPDITENPHQLKFKEVDASQTPRALDSVALSVVNYNYATAAS LPNSESVYMEPLNKTSAQYINFIAATSKEKNNKVYKEVAKAYASKATEKAIKEQYPDG GELPAWNLKL" gene 320339..321199 /gene="plpD" /locus_tag="L120334" /db_xref="GeneID:1113931" CDS 320339..321199 /gene="plpD" /locus_tag="L120334" /note="membranes, lipoproteins, and porins; attached to the outer membrance by a lipid anchor; NLPA family of lipoproteins" /codon_start=1 /transl_table=11 /product="outer membrane lipoprotein precursor" /protein_id="NP_266477.1" /db_xref="GI:15672303" /db_xref="GeneID:1113931" /translation="MNPRNRKILFGSLLLLVIIVGLITFTLRQGKSKSTSVSKIVKIG LMPGGKQEDAIWKQVQKIAKDQFGITLKFVNFTDGDQPNKALANHEVDLNAFQHYAYL KSWNKANNGNIVSIGDTIITPIHLYSTKYKNVTEIPDKSTIAIPNDVTNESRALYVLK NAGLIKLDTSRGALATVKDIRDNPKGLIIKEIDASQTPRALDSVAAAVINYNFAISAK ISEKESIYQEPLNEDSAQWINFIAANQSDKNNKVYKEVVKAYEQKNIADSIKKEYPDG GELPAWNLKL" gene 321303..322409 /gene="ydcB" /locus_tag="L121289" /db_xref="GeneID:1113932" CDS 321303..322409 /gene="ydcB" /locus_tag="L121289" /note="transport and binding protein; amino acids, peptides and amines" /codon_start=1 /transl_table=11 /product="amino acid ABC transporter ATP binding protein" /protein_id="NP_266478.1" /db_xref="GI:15672304" /db_xref="GeneID:1113932" /translation="MTAIIELNNLSVQFHQKGRLVTAVKDATLHIEKGDIYGVIGYSG AGKSTLVRTINLLQKPTKGQIVINGEKIFDSENPVKFTGAKLREFRQKIGMIFQHFNL LSEKTVFNNVAFALQHSQIEDKNGKKRYLTKKEKTDKVTELLKLVDLEELSDKYPAQL SGGQKQRVAIARALANDPEILISDEGTSALDPKTTNQILDLLKSLHEKLGITVVLITH EMQVVKEIANKVAVMQNGEIIEQNSLIDIFAQPKEALTKQFIETTSSVNRFIASLSRT ELLAQLADDEELIHLDYSGSELEDPVVSDITKKFDVTTNIFYGNVELLQGQPFGSLVL TLKGSSEHRAAAKAYFVERHLKFEVLGKIERTVD" gene 322409..323104 /gene="ydcC" /locus_tag="L122401" /db_xref="GeneID:1113933" CDS 322409..323104 /gene="ydcC" /locus_tag="L122401" /note="transport and binding protein; amino acids, peptides and amines" /codon_start=1 /transl_table=11 /product="amino acid ABC trasporter permease protein" /protein_id="NP_266479.1" /db_xref="GI:15672305" /db_xref="GeneID:1113933" /translation="MAEWFAHTFPNVVYLGWSGETGWWTAIVQTLYMTFISALIGGLL GLIFGIGVVVTAEDGITPNRPLFWILDKIVSIGRAFPFIILLAAIAPLTKILVGTQIG VTAALVPLALGVAPFYARQVQASLESVDHGKVEAAQTVGADFLDIVFTVYLREELASL IRVSTVTLISLIGLTAMAGAIGAGGLGNTAISYGYNRFANDVTWFATILILIFVLLVQ LVGDFLARRVSHR" gene 323152..323700 /gene="ydcD" /locus_tag="L123147" /db_xref="GeneID:1113934" CDS 323152..323700 /gene="ydcD" /locus_tag="L123147" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266480.1" /db_xref="GI:15672306" /db_xref="GeneID:1113934" /translation="MKNNSVKIVVATGIGAALFVIIGWLINIPTPIPNTSIQLQYAVL ALFSALFGPLAGFLIGFIGHALKDSFLYGAPWWTWVLGSGLIGLFLAFGVKRETLTQG IFGNKEIIRFNIVQFLANVVVWGIIAPIGDVLVYSEPANKVFTQGIVAGLVNALTIAV AGTLLLKLYAATRTKSGSLDKE" gene 323809..325506 /gene="ydcE" /locus_tag="L123777" /db_xref="GeneID:1113935" CDS 323809..325506 /gene="ydcE" /locus_tag="L123777" /note="transport and binding protein; contains two ATP-binding domains" /codon_start=1 /transl_table=11 /product="ABC transporter ATP binding protein" /protein_id="NP_266481.1" /db_xref="GI:15672307" /db_xref="GeneID:1113935" /translation="MEALISFKDFTFKYDLQKNPTLKKINLEIFPGEKVLIVGPSGSG KSTIGSCLNGILPHLHKGEASGKLSIAGLPFGTSIAELSEKVSTILQDTDGQFIGLSV AEDIAFALENDGLIHDELVSKVAYWSDKTETNKLLNHRPQDLSGGQKQRVSLAGVLID ESPILLFDEPLANLDPQTCLETMALIKDIHENNEVTTIIIEHRIEEVLPLGIDKIVVV NDGEIVATGSPAELLKTEIFNENSLREPLYLSALKAANATKLLTDFSDLKSLEVLSAK KLLTDFLDTYKFTDKAVSKNNILSVKNLSVNFAQHEVLKGINLEVQEGEKISIVGKNG VGKSTFANALCHFVEASGEILYREQSIIADSISERAKKIGYIMQNPNLMISQNIVSDE VAAGLRLRHVDEKMIQDKVEEILKVCGLYPFRNWPISSLSYGQKKRVTIASILILEPE ILVLDEPTAAQDLQSYREIMDFLDELNRRLHLTMIMITHDMYLITEYSDRTLVFADGK IIADSSPYQILENEDFVKMGNLSQPSLYQLARQTDTNPVLLTKAFINFQNQERLKHE" gene 325499..326320 /gene="ydcF" /locus_tag="L125503" /db_xref="GeneID:1113936" CDS 325499..326320 /gene="ydcF" /locus_tag="L125503" /note="transport and binding protein" /codon_start=1 /transl_table=11 /product="ABC transporter permease protein" /protein_id="NP_266482.1" /db_xref="GI:15672308" /db_xref="GeneID:1113936" /translation="MNNQLSVLGYQAGNSFIYQLNATAKLLFFLLISISSMVTYDTRY LAFVALFSVVLFYFSKIPFSSVKRVAQFAAIFAILNLLFVFIFDPGYGARLYDSKTIL WGPLTLEELFYLFNLVLKYFSTIPLALLFILTTNPSQFASSLNKIGLPYRSSYSVSLA LRYIPDMQERFLAIRNAGQARGMDLSKKVGLFSRIKLNVQLLLPLIFSSLEQIDTIST AMELRRFGKKKKRSWYSYQPLNVKDYLVILLALLGVAIVVLLFFVNQGRFFNPFH" gene 326483..326776 /gene="ydcG" /locus_tag="L126409" /db_xref="GeneID:1113937" CDS 326483..326776 /gene="ydcG" /locus_tag="L126409" /note="PBSX(XRE) family of transcription regulators" /codon_start=1 /transl_table=11 /product="transcription regulator" /protein_id="NP_266483.1" /db_xref="GI:15672309" /db_xref="GeneID:1113937" /translation="MENKIRELRRLSHLSQEDVAHIAHVSRQTINAIENDKYDPELTL AFKLAETLGTTVDELFNYQPTVVKRKENDVFWCEKYQCVLWKRAGIEKRNAVD" gene 326700..327479 /gene="fhuC" /locus_tag="L200012" /note="putative ferrichrome ABC transporter; may contain frameshift" /db_xref="GeneID:1113938" gene 327472..328422 /gene="fhuB" /locus_tag="L127476" /db_xref="GeneID:1113939" CDS 327472..328422 /gene="fhuB" /locus_tag="L127476" /note="transort and binding protein, cations" /codon_start=1 /transl_table=11 /product="ferrichrome ABC transporter permease protein" /protein_id="NP_266484.1" /db_xref="GI:15672310" /db_xref="GeneID:1113939" /translation="MPKKHFLTIFFALVFSLLFLSVIYLMLGNKNVPLTEILVNKMVL QLRFPRLISLYLTGFLLSVSGFIVQIMTRNPIAEMATLGISGGSSLALSLILTLGWST NDGISVLVSSLGAFIALAVVMLLTARTHFQPLKVVLVGTSVGLFATSLASSLTFASHD TQAYFRWIVGSFSGITNTKVLLMAVVSLIFLILLLLFSKQIYLLNFGDELAQSFGISV NFVRLVIMFLVALASGVTVASVGVVSFVGLIAPHIAKKLVRANFWQNVILSVLTGMLL LVLADLIARNLFKPYEFPAGSLTMLLGAPFFLWVITKEAK" gene 328424..329362 /gene="fhuG" /locus_tag="L128386" /db_xref="GeneID:1113940" CDS 328424..329362 /gene="fhuG" /locus_tag="L128386" /note="transort and binding protein, cations" /codon_start=1 /transl_table=11 /product="ferrichrome ABC transporter permease protein" /protein_id="NP_266485.1" /db_xref="GI:15672311" /db_xref="GeneID:1113940" /translation="MKRKFTLLFVLLLVLIVVDLTQFSTNPQILSILIPNFRLPRLIT ILSAGIALSLSGFIIQNITENPLADSGTIGITSGASAGSVAFLLIADHFKLTGLWNFS YPIFALIGALLSFVLIYFFALRKQVSSVRVLLTGIAITAFFQALITIGQLSVNAFDFQ KVAVWLSGDIWQTGSTYLFICVLLLVIGLIILPFFLRKLEILSLGEEMATTLGLEVQK TKIYLYLLALLFAAVGVLLVGGLAFVGLIAPHIAREIAGFKSRKSLIATALSGMIILS FADIISQTIIAPSSLPLGFVVAFIGAPYYIYLIQKV" gene 329447..330388 /gene="fhuD" /locus_tag="L129403" /db_xref="GeneID:1113941" CDS 329447..330388 /gene="fhuD" /locus_tag="L129403" /codon_start=1 /transl_table=11 /product="ferrichrome ABC transporter substrate binding protein" /protein_id="NP_266486.1" /db_xref="GI:15672312" /db_xref="GeneID:1113941" /translation="MKKVLTTLIAAGALLTLAACSSNSSSKKATSSDDKVTFHALNGD VKVPKNPKRIAVQNYPDEVASLGANVVGTDSWAFPNTFLSKDQKKNMVDLGAPKFNME KLIAQNPDLIITVDKDQVADYQKVAPTVLVNYKDLSGMNKSLDYFAKLLNREDEKASF LKNFKKEADKQKEKLAKVDVKPAKNTISLLELQGDKVYAFGDNFARGGQALTTGLGFK ESSKMAELSKGVGYAEVNTESLGEFDADYIFIDFADKDKEQYAALKNNPAWQNLKAVK EGHVITMDYDKVYFFGGPTAAKEELSLYTDAIIKATK" gene 330450..331355 /gene="fhuR" /locus_tag="L0219" /db_xref="GeneID:1113942" CDS 330450..331355 /gene="fhuR" /locus_tag="L0219" /note="LysR-family regulators; probably cotranscribed with other fhu genes" /codon_start=1 /transl_table=11 /product="fhu operon transcription regulator" /protein_id="NP_266487.1" /db_xref="GI:15672313" /db_xref="GeneID:1113942" /translation="MNIKQLRYVVAIANSGTFREASEQLFVSQPSMSIAVKDLEQELG FQIFERTNTGATLTIEGERFYEQAQTVLRNFETFESKYSKPKESDKTFSVASQHYDFL APVAVEFAKKNPEIKNFRIFESTTYNILQEVAQGHSELGVVYLNKQNRSGILRMLNKL ELDYEEIFLSQTHIYIRKGHPLAQRETISDDDLKPLDRVRFTQENEQFLYYSEDLIET FENTLIYNVTDRASLNGILERTDAYATGLGFIDKESVHNVTVVPMEGDNGNSLILVKH RGHLLSNAATSYKRSLEVYFENYEF" gene complement(331413..332594) /gene="yddA" /locus_tag="L131423" /db_xref="GeneID:1113943" CDS complement(331413..332594) /gene="yddA" /locus_tag="L131423" /note="transport and binding protein" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="NP_266488.1" /db_xref="GI:15672314" /db_xref="GeneID:1113943" /translation="MKKISPSLTLLALAINAFAIGSTEFISVGLMPMIVNTFNISLSQ AGLTVSLYALGVTVGAPLLTILTGTWNRKTLMVSIMGLFILGNLLSAFAPTFLLLLVG RVLASLAHGIFMSISTVIAADVVRPEKRASAIALMFTGLTVATVIGVPLGTFIGQHSN WHMSFVFIVVIGLIGLIATSILVPKGLPIPGKINLSGLARIFTNKSILMSLFITAFGY GGTFAAYTYLTPILEGTFRFSASTVVIILVAYGVMVAIGNSLGGHLANKNILPALQKM FAALALSLLFLFISASLASQALGLIATLLLGLFAFMNVPGLQLYVVQLAEKFTPKDIT LVSAFNIAAFNVGITLGSFVGGQISKGSSVVFTPLGGIIIILLAMFLIRLAQKDQASK L" gene complement(332607..333425) /gene="yddB" /locus_tag="L132617" /db_xref="GeneID:1113944" CDS complement(332607..333425) /gene="yddB" /locus_tag="L132617" /note="aerobic energy metabolism" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_266489.1" /db_xref="GI:15672315" /db_xref="GeneID:1113944" /translation="MKLNNQIEIPELGLGVFQIPNDETADVVKNAIVNGYRLIDTAKI YENEEGTGQGIKEGLAMTGLSRDDLFITSKLWGDNHSYEETVQNFEKSLKKLDLDYLD LYLIHWPGTHYAYKEAWNAMEDLYKAGKIKAIGVSNFQKSHLEELLSYAKITPVLNQI ELHPKLSQEELRNFLELHDIKVQAWSPLMQGQLLDNEVLKKIADKHGKSVAQIILRWD IQQDILVNVKSIKSERMIANRQIFDFSLDSEDMKAINSLNEELRVGPDPEHFNF" gene 333567..333914 /gene="yddC" /locus_tag="L133547" /db_xref="GeneID:1113945" CDS 333567..333914 /gene="yddC" /locus_tag="L133547" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266490.1" /db_xref="GI:15672316" /db_xref="GeneID:1113945" /translation="MKKIYNIGVEATMDVIGGKWKPIILCNLRHNPSRPGELRRQIPG ISQKMLTQQLRELEIDNIIVRKVYNQVPPKVEYSLSPYGETLNGLLDILCSWGEGHVQ TLKSMGEEVQVLE" gene 333940..334332 /gene="yddD" /locus_tag="L133932" /db_xref="GeneID:1113946" CDS 333940..334332 /gene="yddD" /locus_tag="L133932" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266491.1" /db_xref="GI:15672317" /db_xref="GeneID:1113946" /translation="MYQPAFNKIHHIAIIAADYEKSRQFYVDILGFSIIRENHRPEKG DIKLDLKMNEEKEIELFIKSDAPERLTYPEAKGYRHLAIKTTNIEEDRNYLISQGVKV EEIRQDEITDRKMLFFYDPDDLPIELHE" gene 334509..335210 /gene="gpmA" /locus_tag="L0011" /db_xref="GeneID:1113947" CDS 334509..335210 /gene="gpmA" /locus_tag="L0011" /EC_number="5.4.2.1" /note="catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate" /codon_start=1 /transl_table=11 /product="phosphoglycerate mutase" /protein_id="NP_266492.1" /db_xref="GI:15672318" /db_xref="GeneID:1113947" /translation="MPKLVFARHGESEWNLANLFTGWADVDLSENGTKQAIEAGKLIK EAGIEFDIAYTSVLKRAIKTTNLALEYSDQLWVPVVKSWRLNERHYGGLTGLNKADAA AKHGDEQVHIWRRSYDVLPPAMDHDDKYTAHGDRRYAGLEDSLIPDAENLKVTLERAL PFWEDQIAPALKEGKNVFVGAHGNSIRALVKQIKKLSDDEIMDVEIPNFPPLVFEFDD NLNVQNEYYLAPKKA" gene 335384..335947 /gene="ahpC" /locus_tag="L135351" /db_xref="GeneID:1113948" CDS 335384..335947 /gene="ahpC" /locus_tag="L135351" /note="cellular processes, detoxification; directly reduces organic hydroperoxides; Probably induced by heat shock, salt stress, oxidative stress and glucose limitation; general stress protein" /codon_start=1 /transl_table=11 /product="alkyl hydroperoxide reductase" /protein_id="NP_266493.1" /db_xref="GI:15672319" /db_xref="GeneID:1113948" /translation="MSLVGKKIEEFSTDAYLGGKFIKVSDKDFYGKWSVLCFYPADFS FVCPTELEDLEETYPTLKSLGVEVYSASTDTHFVHAAWHEHSDAISKITYPMLADPSQ KISRAFDVLDEEAGLAQRGTFIIDPDGVIQALEITADGIGRDASQLVDKIKAAQYVRN HPGEVCPAKWKEDGASLHVGIDLVGKI" gene 336014..337543 /gene="ahpF" /locus_tag="L135954" /db_xref="GeneID:1113949" CDS 336014..337543 /gene="ahpF" /locus_tag="L135954" /note="cellular processes, detoxification; protects the cell against DNA damage by alkyl hydroperoxides; similar to NADH peroxidase nox-1 of Streptococcus mutans" /codon_start=1 /transl_table=11 /product="alkyl hydroperoxide reductase" /protein_id="NP_266494.1" /db_xref="GI:15672320" /db_xref="GeneID:1113949" /translation="MILDETLRAQLMPYMDLLENPIILKVDADLESENGKKIVEFTDE LASLSEMISKETAKLNRKTAFSIEREGVSGVLFSGLPLGHELNSLVLALVQVSGRPPR IEQELVERIQAIQNPLHFETYVSLTCHNCPDVVQALNTMSILNPNISHTMIEGGMFQE EVEAKGIMAVPTVFKNGEEFHNGRASLEELLEKITGPESSEAFFDKDPYDVLVVGGGP AGASAAIYAARKGIRTGLIAERFGGQPLETLGIENLIGTPYVEGVQLGRQLEEHVKKY PVDLMNLQKAVKLEKKDLIEVSLENGALLKSKSVIISTGARWRDLGIPGEQEFKTKGV AYCPHCDGPLFAGKDVAVIGGGNSGIEAAIDLAGLVRHVTVLEFLPELKADKILQEKL ATLNNVTVLTNVETKEILGDDKVRGLNYQVRGSKETVHLELAGVFVLIGLVPNTQWLE GTIDLSARGEILTDKVGATNLPGVFAAGDCTDSVYKQIIISMGTGATASLGAFDYLIR N" gene 337709..339874 /gene="pbp2B" /locus_tag="L137682" /db_xref="GeneID:1113950" CDS 337709..339874 /gene="pbp2B" /locus_tag="L137682" /note="cell envelope, murein sacculus and peptidoglycan" /codon_start=1 /transl_table=11 /product="penicillin-binding protein 2B" /protein_id="NP_266495.1" /db_xref="GI:15672321" /db_xref="GeneID:1113950" /translation="MSDNKRKNDKRKQSDKSKKSHKEVKILKDPTKLIPKRVNLLFFV IFVLFMILIGKLFNMQVLNSHFYAEKSISAGGDVQIIEGAPRGNIYDATGKALASTVA VQAVEFTRSQNATADEIYQVANKLATILSNNIDVADLTTRDKKDYFLANSKNLEKIAN SLSEKEKKDKHGNDLSGSQIYDVELSKVKDSDLNFTAEQTFAAKLFKEMNSTTTFNTT KIATGSITAEQQATIAEQEGDLPGITIGTSWDRSYAQNSLTPLMGTITSQKSGIPAED LDAYLKKGYQRNDRVGTGLLEKGYESELQGTHSISKVKFDKNGDVSGTKTIQKGKRGD DLKLTINLDFQNGVNNIVKTQLDQLIAQGYGQYNRGAYAVVLNVKTGAVLALSGYQRD PNTGTITENTLGTFQSVFTPGSVVQMGTLTAAWNAGVISGNDTLTAQSIQFKDSNPIN DWWGDASPMALTAVEALQYSSNTYMMQLAMRMLGAPYTAANQFLDDTNRVKVYEQFRK AFASYGLGASTGFDIPGESTGYLPSAKSEAASGVNVLYESFGQYDNYTPLQLAVYAAT LGNNGTRLSPHIVQGIYEGGTDGQPGTLIKNITPKIMDKVNITPDNMDVLHQGMYAVV HGAGGLTTGRSMDSSKVSISGKTGTSESTKVLADGSQVIVTANNAVAFAPSDNPEIAI AVVLPDNTESNASSGTKANQSIVTGITDLYYSNEAFRKN" gene 340013..340609 /gene="recR" /locus_tag="L0265" /db_xref="GeneID:1113951" CDS 340013..340609 /gene="recR" /locus_tag="L0265" /function="RecBC-independent recombinational process of DNA repair" /note="involved in a recombinational process of DNA repair, independent of the recBC complex" /codon_start=1 /transl_table=11 /product="recombination protein RecR" /protein_id="NP_266496.1" /db_xref="GI:15672322" /db_xref="GeneID:1113951" /translation="MYYPEPIARLIESFSKLPGIGQKTATRLAFYTIGMEDQDVNEFA KNLLSAKRDLSFCSICGNLTESDPCAICTDPTRDRTTILVVEESKDVLAMEKIREYRG LYHVLHGTISPMNGISPDEINVKTLITRLMDSEVKEVIIATNATSDGEATAMYLARMI KPAGIKVTRLARGLAVGSDIEYADEITLSKAVENRLEI" gene 340726..341775 /gene="ddl" /locus_tag="L140690" /db_xref="GeneID:1113952" CDS 340726..341775 /gene="ddl" /locus_tag="L140690" /EC_number="6.3.2.4" /note="D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli" /codon_start=1 /transl_table=11 /product="D-alanyl-alanine synthetase A" /protein_id="NP_266497.1" /db_xref="GI:15672323" /db_xref="GeneID:1113952" /translation="MSKETLILLYGGRSAEREVSVLSAESVMRAVNYSRFVVKTYFIT KGGEFIKTQEFTDKPAEEEKLLTNDLAESYPKISPAAIYEKAAVVFPVLHGPMGEDGS IQGFLEILRLAYVGPNILSASSTMDKLLAKHVFEAVGVPQVPYVAAFADENQGEIAQE VVEKLEFPVFVKPANMGSSVGISKVDDLADLQPALSEAYKYDNRVVIEQGVDAREIEC AVLGNNSDVSATLPGEVVKDVEFYDYNSKYIDNKIQMDIPAKVPADLAQKMQEYAIKA YKAVNGTGLSRCDFFVTKDGNVYLNEINAIPGFTQWSMYPLLWENMGLSYSDLIEKLV DLAKETFETRENHLL" gene 341850..343172 /gene="murF" /locus_tag="L141766" /db_xref="GeneID:1113953" CDS 341850..343172 /gene="murF" /locus_tag="L141766" /function="peptidoglycan biosynthesis; catalyses the final step in synthesis of UDP-N-acetylmuramoly-pentapeptide" /note="cell envelope murein sacculus and peptidoglycan; MURCDEF family" /codon_start=1 /transl_table=11 /product="D-Ala-D-Ala adding enzyme" /protein_id="NP_266498.1" /db_xref="GI:15672324" /db_xref="GeneID:1113953" /translation="MKLTIHEIAQVVGAKNDWSQLADLSVNKIEFDSRLIEKGDIFLP LKGARDGHDFIEIAFDNGAIISFSEKEVEQAHLLVDDNLLAFQKLAKYYLEKTKVPVI AVTGSNGKTTTKDMIAAVLSKKFKTYKTQGNHNNEIGLPYTILHMPDDTEKLVLEMGM DHPGDIDFLSELAKPELAVITLIGEAHLEHMGSRENIAKGKMGITAGLHGELIAPADP IINAFIPDNQKIIRFGLPGEDLFITKLVEHKEKLTFETNFLDESITIPVPGKYNATNA MLAAFVGLHYGLSEAEIKKALKEVELTRNRTEWKKAKNGADLLSDVYNANPTAMRLIL ETFQAIPKNENGRKIAVLADMLELGPSAAQLHKDILKSIDFNKIDKVYLYGEMMKNLA EISTDKAVSYFTDLDLLTESLSADLKPTDQVLFKGSNSMKLSEVVEKL" gene 343342..344994 /gene="optS" /locus_tag="L143312" /db_xref="GeneID:1113954" CDS 343342..344994 /gene="optS" /locus_tag="L143312" /note="transport and binding protein; amino acids, peptides and amines" /codon_start=1 /transl_table=11 /product="oligopeptide ABC transporter substrate binding protein" /protein_id="NP_266499.1" /db_xref="GI:15672325" /db_xref="GeneID:1113954" /translation="MKQGKIIGLTSLIALSGIILVACGTKTSEQKNIKFSIPTDVASL DTTILTDQYSYDVAGNVEEGLTRVDSKGNAALALAKSIDVSKDGLTYTVTLRDNLKWS NGDRLTAKDFVYSWKRAVDPKTGSEYAYLMGAVSGANDIISGKSSLDSLGIKAESDTE FTVTLAQPTPYFKFLLSEPVYYPLDQKVVDKYGKQYGTSSDKTVYNGPFMFKSDKGWT GTNKTFSIYANPNYYDKSAVKSKQIDFQVISNANTGAQLYKQGKLDFTLLSTTDLINA NKKTKGYTVFKQARTDYIEYNQSGKNASSPDAQKALANQNIREALNLATNRAGVVKTA LPGSTVATSFTPVGMSKTSTGEDFATYAKQDYRYDPTKAKDLWEKGLKELGLTKLTLS LEAAGDLAPSEATANFLQTAYQQNLPGLTVNLKLVPFKQRLNDAQNGNFDMVLSGWGG DYAEPSTFLQLFTTGQSYNDGKFSSKTYDDAFKAATTTPDVLEPAKVDEHYKAAETAL YQGSYINPVDFQANPALMNPKITGLEFHSTGLAYDLKSAYVK" gene 345303..346940 /gene="optA" /locus_tag="L145267" /db_xref="GeneID:1113955" CDS 345303..346940 /gene="optA" /locus_tag="L145267" /note="transport and binding protein; amino acids, peptides and amines" /codon_start=1 /transl_table=11 /product="oligopeptide ABC transporter substrate binding protein" /protein_id="NP_266500.1" /db_xref="GI:15672326" /db_xref="GeneID:1113955" /translation="MKTWKKVTLGTVALGSAALLAACGNSGSSSSSSSKDIQWNLTSP IQTLDSSLATDTYSNIIIGNTNAGLTRVDKDGKAQPELAKSVDVSKDGLTYTFHLRDG LKWSNGDALTAKDFVYSWQRAVDPATASEYGYLLGPVKNANEINGGKADKSTLGVKAT DDKTFVVTLAQPTPYFEFLTANSVYYPLNQKVVEKYGKQYGTSSEKMVYSGPYKFEKS KGWNGSNQTFSIVKNDDYWDKSAVKTKEIDFQVVQDPKTSFNLYKQGKIVQASIGDPD LFKANKNNKDVVSLDEATTAYIQYNQSGKNKALANKNIREAFNLATDRQQYVDTVTPA SNPATGLTPAGMAKTNTGVDFAKYAAQPYKYDATAAKAAWAKGLSEIGETKLTLTLTT DDTSASKDSATFLKQAWEKQLPGLTLNIKSVPFKQRLNDSTTGNFDMVISLWGGDYAE PSTFLDLFVKDGPNNNGKINNVTYDKAIKAAEVTDALDPEKHYADYKAAEESLYTESN LNPLYFRTTPVLRNPNLKDVRFGSTGLMYDFKTAYLK" gene 347018..347929 /gene="optB" /locus_tag="L147009" /db_xref="GeneID:1113956" CDS 347018..347929 /gene="optB" /locus_tag="L147009" /note="transport and binding protein; amino acids, peptides and amines" /codon_start=1 /transl_table=11 /product="oligopeptide ABC trasporter permease protein" /protein_id="NP_266501.1" /db_xref="GI:15672327" /db_xref="GeneID:1113956" /translation="MIKYILKRLGLLLLTLFLIVTLTFFMMQVMPGTPFSNPKLTPDQ LEILKHAYGLDKPLWQQYFIYVGHMFTGNFGTSFVYTNQPVITMIAQRLPVSMQLGVQ ALILGTILGAFMGKASARRKNGILDGIFGFVSVLGISVPSFVIGTLILLYLGFNLNLF PISGWGTFSQTIMPTIALSFAPMAVVTRFVRSEMIESLSSDYILLARAKGLSEKEVVN KHALRNSLIPMLTLIGPMAANLLTGSVLIEKIFSIPGIGSQFVDSIPAKDFPVIMATT IVYAVILMLFILVTDILTAIVDPRVRL" gene 347945..348976 /gene="optC" /locus_tag="L147936" /db_xref="GeneID:1113957" CDS 347945..348976 /gene="optC" /locus_tag="L147936" /note="transport and binding protein; amino acids, peptides and amines" /codon_start=1 /transl_table=11 /product="oligopeptide ABC trasporter permease protein" /protein_id="NP_266502.1" /db_xref="GI:15672328" /db_xref="GeneID:1113957" /translation="MENLNKDFTLVGSKGSDSTEKIAKPALSFFQDAWRRFKKNKVAL VAMWIIAITLVFSVISAFVVPQSKANYFDPNKSQVYGNLPPKLSGDLPFWNGEFKAPG STERTDVYKSQDVPSKDKYVFGTDKYGRSLAKRTIVGLRISLIIALAAALIDLVIGVT YGIISGWMGGKVDMVMQRIIEIIQSVPNLVVVTMLALLLGQGISSIIIAIGLFAWTGM ARQVRNMVLSYKERDFVLASKTLGQSTWKIAVKHLLPNVSGVIVVQIMFDIPSMIMYE AVLSAINLGVKPPTSSLGTLINDGIASLQFYPFQLIIPAVVLSVLSLTFIFFGDGLRD AFDPRASED" gene 348979..350028 /gene="optD" /locus_tag="L148976" /db_xref="GeneID:1113958" CDS 348979..350028 /gene="optD" /locus_tag="L148976" /note="transport and binding protein; amino acids, peptides and amines" /codon_start=1 /transl_table=11 /product="oligopeptide ABC trasporter ATP binding protein" /protein_id="NP_266503.1" /db_xref="GI:15672329" /db_xref="GeneID:1113958" /translation="MAEEKVLEVKNLHVNFHTYAGDVKAIRDVSFDLEKGQTLAIVGE SGSGKSVTTKTLMGLNAKNAVIPQGELLFKGRNLLDLKEEEWQKIRGNEISMIFQDPM TSLDPTMRIGKQIAEPLLKHNKGMSKADAMKRALELMQQVGIPDAEVHINDYPHQWSG GMRQRAVIAIALAADPEILIADEPTTALDVTIQAQIMHMMAELQERINSSIVFITHDL GVVAGFAHKVAVMYAGEIVEYGTVEEIFYNPQHPYTWGLLDSMPTVDSSVDRLVSIPG TPPDLLNPPKGDAFAARNKFALAIDFEEEPPYFEVSPTHFAKTWLLDPRAPKVTPSDN ILARWKRWEELKGDK" gene 350025..350966 /gene="optF" /locus_tag="L150031" /db_xref="GeneID:1113959" CDS 350025..350966 /gene="optF" /locus_tag="L150031" /note="transport and binding protein; amino acids, peptides and amines" /codon_start=1 /transl_table=11 /product="oligopeptide ABC trasporter ATP binding protein" /protein_id="NP_266504.1" /db_xref="GI:15672330" /db_xref="GeneID:1113959" /translation="MMTEPKKVIEIKNLDLTFNKGKKGANKAINNVSLDIYEGETFGL VGESGSGKTTIGRAILKLYDNFITGGEILFEGKDVRNLKGSELREYRSEAQMIFQDPQ ASLNGRMRVKDIVAEGLDANGLVKTKAERDARVLELLRLVGLNDDHLTRYPHEFSGGQ RQRIGIARALAVKPKFVVADEPISALDVSIQAQVVNLMRDIQAKENLTYLFIAHDLSM VKYISDRIGVMHWGKILEVGTSDQVYNHPIHPYTKSLLSSIPSPDPISERERTPIVYD PTAELDGQEREMREITPGHFVFSTEAEAEIYKKNATV" gene 351198..352769 /gene="prfC" /locus_tag="L0369" /db_xref="GeneID:1113960" CDS 351198..352769 /gene="prfC" /locus_tag="L0369" /note="stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein" /codon_start=1 /transl_table=11 /product="peptide chain release factor 3" /protein_id="NP_266505.1" /db_xref="GI:15672331" /db_xref="GeneID:1113960" /translation="MTLQEEIKKRRTFAIISHPDAGKTTITEQLLKFGGAIREAGTVK ARKTGNFAKSDWMDIEKERGISVTSSVMQFDYAGKRVNILDTPGHEDFSEDTYRTLMA VDAAVMVIDSAKGIEAQTKKLFQVVKRRGIPVFTFINKLDRDGREPLDLLSELEEILG IASVPMNWPIGMGKNFQGLYDFTHGRVEVYQPEDGKRFVEFDENGEVPASHPLTKNPF FTQALEDAELLLDAGNQFSEEEVVAGQLTPVFFGSALTSFGVETFLETFLEYAPEPHS HKTVDEEEIEPLNPDFSGFIFKIQANMDPRHRDRIAFVRIVSGEFERGMDVNLIRTGK KVKLSNVTQFMAESRENVENAVAGDIIGVYDTGTYQVGDTLTTGKLKKSFEPLPTFTP ELFMRVQAKNVMKQKSFQKGIDQLVQEGAIQLYKSYTTGDIMLGAVGQLQFEVFKDRM EREYNSETIMTPMGTKTVRWIKEEDLDEKMSSSRNILARDRFDHPLFLFENEFAMRWF KDKYPDVELMEQFSV" gene 353033..354676 /gene="rheA" /locus_tag="L0339" /db_xref="GeneID:1113961" CDS 353033..354676 /gene="rheA" /locus_tag="L0339" /note="RNA processing; putative ATP-dependent RNA-binding protein with helicase activity; similar to DEAD box family helicases" /codon_start=1 /transl_table=11 /product="ATP-dependent RNA helicase" /protein_id="NP_266506.1" /db_xref="GI:15672332" /db_xref="GeneID:1113961" /translation="MKFSELGLSEGIVNTLTEIGYEQPTPIQEQTIKLALEGRDVLGQ AQTGTGKTAAFGLPTIEKIDASNPAIQALVIAPTRELAVQGQEELFRFGKSKGLKVRT VFGGSSIEKQIKGLKAGAHIVVGTPGRLVDLIKRKAIKLDQLETLILDEADEMLNMGF LEDIHFIIEKTPEARQTLLFSATMPNDIKKIGVKFMKNPEHIKIAAKEMTADRIDQYF VKTKEFEKFDVLTRLLDVERPELAIVFGRTKRRVDELIRGLKLRGYRAEGMHGDLDQN KRLAVLRDFKAGHIDVLVATDVAARGLDVSGVTHVYNYDITQDQESYVHRIGRTGRAG KSGRSVTFVSYNEMGYLRAIENMTKKPMKGLKPPTKEEAYQASLSVAMDDVLRDLSDD SAKAKLAKFDKQAASLLEKFDAKELVALLLQGRVKDPDNQEEVKITAERPLPYNGEGK GFKKKGKGGGGRYKGRGNGDRDGNRGGYRGNRDGKDGDRGGDRKRNWKDRDDNRGGYR GKRDDRRFDDRKQGEKTPRKRTTGTEKSAGFVMRSRGDK" gene 355047..355958 /gene="era" /locus_tag="L0155" /gene_synonym="yqfH" /gene_synonym="sdgE" /gene_synonym="bex" /gene_synonym="rbaA" /db_xref="GeneID:1113962" CDS 355047..355958 /gene="era" /locus_tag="L0155" /gene_synonym="yqfH" /gene_synonym="sdgE" /gene_synonym="bex" /gene_synonym="rbaA" /note="Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome" /codon_start=1 /transl_table=11 /product="GTP-binding protein Era" /protein_id="NP_266507.1" /db_xref="GI:15672333" /db_xref="GeneID:1113962" /translation="MTNNKFKSGFVAILGRPNVGKSTFMNHVMGQKIAIMSDKPQTTR NKIQGIYTTENEQIVFIDTPGIHKPHNALGDFMVQSAYSTLRECDVVLFMVAADEPRS TGENMIIERLKKAEVPVILVVNKIDKIHPDRLFEIVADYTSQMEFSEVVPISAKQGNN TERLIDTLSEKLDEGPQYFPEDQITDHPERFLVSEMIREKILLLTREEVPHSIAVTTD QMTRDEETGKIHIMATIIVERKSQKGIILGKGGDMIRKIGKMARRDIEIMLGDKVYLE TWVKIKNDWRDRKMDLADFGYNRDDYM" gene 356055..357647 /gene="asnB" /locus_tag="L00396" /db_xref="GeneID:1113963" CDS 356055..357647 /gene="asnB" /locus_tag="L00396" /function="asparagine biosynthesis" /note="functions in asparagine biosynthesis; converts glutamine, aspartate, ATP, and water to glutamate, asparagine, pyrophosphate and AMP" /codon_start=1 /transl_table=11 /product="asparagine synthetase B" /protein_id="NP_266508.1" /db_xref="GI:15672334" /db_xref="GeneID:1113963" /translation="MCGFLFMETSDLTIEEFKSNLELIEHRGPDDQQHVRDTLGNDFG FCRLSIMDLSDLGRQPFGLNGKRVMCNGEIYNFLSLRKFLETKGYKFTGDSDCEVLLP LFETTGIETMVKMLDAEFAFVLVDENTAEIFAARDPFGIRPLFYGYNKVTGKISFSSE AKALISTCNDVTPFPPGYYYANGEFHVFNDIAEVSTIVEEPLAEISGHIRRKLERAVK KRLHADAPMGYLLSGGLDSSLVCAIAAKELESPIKTFAIGMETDPIDLKYAREVADFL RTDHTEILMTKEDVLSAVREVIWHLETWDITTIRASIGMYLICKYIHENTELKVLMTG EVSDEMFGYKYTDFAPSAGAFQKEAQKRVHELYMYDVLRADRCLAAHSLEARVPFADL DFAAYVMSINPSRKLNTYGKGKYLLRHAFEGTELLPDEILFREKAAFSDAVGHSMVDY LKEFADEKYSDEDLAKASEKYPKHTPFTKESLMYREIFEEFYPGYEDWILDFWMPNRD WVGAEVTDPSARVLSNYGDSGK" gene 357841..358659 /gene="mutM" /locus_tag="L0271" /db_xref="GeneID:1113964" CDS 357841..358659 /gene="mutM" /locus_tag="L0271" /EC_number="3.2.2.23" /note="Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases" /codon_start=1 /transl_table=11 /product="formamidopyrimidine-DNA glycosylase" /protein_id="NP_266509.1" /db_xref="GI:15672335" /db_xref="GeneID:1113964" /translation="MPELPEVETVRRELEKRIVGQKIVSIEATYPRMVLTGFEQLKKE LTGKTIHGISRRGKYLIFEIGEKDRLISHLRMEGKYRLASLNVPMEKHDHLALKFTDE QLIYADVRKFGTWELISTDQVLPYFLKKNIGPEPTYETFDEQIFREKLQKSTKKIKPF LLEQTLVAGLGNIYVDEVLWLAKIHPEKVANQLTESSIHLLHDSIIEILQKAIKLGGS SIRTYSALGSTGKMQDELRVYGKTGEKCVRCGNEIQKIKVAGRGTHFCPFCQQK" gene 358813..359976 /gene="recA" /locus_tag="L0260" /db_xref="GeneID:1113965" CDS 358813..359976 /gene="recA" /locus_tag="L0260" /experiment="experimental evidence, no additional details recorded" /note="catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs" /codon_start=1 /transl_table=11 /product="recombinase A" /protein_id="NP_266510.1" /db_xref="GI:15672336" /db_xref="GeneID:1113965" /translation="MATKKKTNFDDITKKYGAERDKALADALALIEKDFGKGSLMRLG EAANQKVSVVSSGSLALDIALGAGGYPKGRIVEIYGPESSGKTTVALHAVAAVQKEGG IAAFIDAENALDPEYAKALGVNIDELLLSQPDYGEQGLQIAEKLITSGAVDLVVIDSV AALVPKAEIDGEIGDSSVGLQARMMSQAMRKLAGHINKTKTTAIFINQLREKVGVMFG SPETTPGGRALKFYASVRLDVRGSTKIEEGSGDNKTQIGKITKIKVVKNKVAPPFKVA LVDIMFGEGISRTGELLNIAVDEGIIKKSGAWFAYNDEKIGQGAEKAKNYLKEHQEIF DEIDHKVRTAHGLLDEAEVAETTEDTSTKAKATKAKKEEKVVETEEIELELED" gene complement(359989..361362) /gene="ydgB" /locus_tag="L160176" /db_xref="GeneID:1113966" CDS complement(359989..361362) /gene="ydgB" /locus_tag="L160176" /note="transport and binding protein; amino acids, peptides and amines; similar to many amino acid permeases" /codon_start=1 /transl_table=11 /product="amino acid permease" /protein_id="NP_266511.1" /db_xref="GI:15672337" /db_xref="GeneID:1113966" /translation="MNTNQNEENKPSQRGLKNRHIQLIAIAGTIGTGLFLGAGKSIHL TGPSIIFVYLIIGALMYILLRAIGEMLYQDPNQHSFLNFVSRYLGEKPGYFIQWSYLL VVVFVAMAELIAIGTYINFWLPDLPIWMTEVFVLVLLTLLNTLNPKFFGETEFWFGMI KIVAIIGLILTAIILIFSHYHTGTDTVSVTNITKGFEFFPNGLSNFFESFQMVMFAFV SMEFIGMTAAETDNPRPTLKKAINQIPIRIVLFYVGALLAIMSIYQWRDIPADKSPFV TIFQLIGIKWAAALVNFVVLTSAASALNSALFSITRNLYSLSKLNNDKILKPFTKFSK AGVPVNALLFTSLLILFTPFISMIPAISNSFVFITSVATNLFLVVYLMTLITYLKYRK SSDFDPKGFVLPAAHIFIPLAIAGFVLIFISLFCFKDTIVPAIGSVIWVLIFGLFTFF KKIKTAE" gene complement(361431..362810) /gene="ydgC" /locus_tag="L161441" /db_xref="GeneID:1113967" CDS complement(361431..362810) /gene="ydgC" /locus_tag="L161441" /note="transport and binding protein; amino acids, peptides and amines; similar to many amino acid permeases" /codon_start=1 /transl_table=11 /product="amino acid permease" /protein_id="NP_266512.1" /db_xref="GI:15672338" /db_xref="GeneID:1113967" /translation="MENLQEKHEAQRGLQNRHIQLIAIAGTIGTGLFLGAGKTIQMTG PSVIFAYILIGIAMFFFLRTIGEMLYNDPSQHSFLNFVTKYSGVRTGYFTQWSYWLVI VFVCISELTAIGTYIQFWLPQVPLWLIEIVMLALLFGLNTLNSRFFGETEFWFAMIKV AAIIGMIVTAIILVAGNFHYSTVLSGKTVHDSASLSNIFDGFQLFPHGAWNFVGALQM VMFAFTSMEFIGMTAAETVNPKKSLPKAINQIPVRILLFYVGALLAIMAIFNWHYIPA DKSPFVMVFQLIGIKWAAALINFVVLTSAASALNSSLFSATRNMYSLAQQHDKGRLTP FTKLSKAGIPINALYMATALSLLAPVLTLIPQIKNAFDFAASCTTNLFLVVYFITLYT YWQYRKSEDYNPKGFLTPKPQITVPFIVAIFAIVFASLFFNADTFYPALGAIVWTIFF GLYSHYKKI" gene 362957..363337 /gene="ydgD" /locus_tag="L162952" /db_xref="GeneID:1113968" CDS 362957..363337 /gene="ydgD" /locus_tag="L162952" /note="similar to YlbF protein of Bacillus subtilis; involved in competence and sporulation development" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266513.1" /db_xref="GI:15672339" /db_xref="GeneID:1113968" /translation="MLIIDQNLLEIDNLLEKIMDEFLKFPEVEAYQKAKADFMADENL QSQLKTLQDNSEYIAFRPELRALQHEINLNEKVYAFRLAENDLQQILTALTKKITNSI SEQIYVDENLPLKGGQHGRHHGKH" gene 363312..363638 /gene="ydgE" /locus_tag="L163307" /db_xref="GeneID:1113969" CDS 363312..363638 /gene="ydgE" /locus_tag="L163307" /note="similar to hypothetical YlbG protein of Bacillus subtilis" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266514.1" /db_xref="GI:15672340" /db_xref="GeneID:1113969" /translation="MDDIMESIEKKEIRPLFIKERIAVYVYCYSYKGTRQLSKFGDVV YTSQKSNYSLLYVNNENLSDLLSKLKDLKFVKKVRVGHIKELDQNFSEAFAQTNLAVK EEIERL" gene 363868..364386 /gene="ydgG" /locus_tag="L163845" /db_xref="GeneID:1113970" CDS 363868..364386 /gene="ydgG" /locus_tag="L163845" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266515.1" /db_xref="GI:15672341" /db_xref="GeneID:1113970" /translation="MLETHYYFTPILDHLEPFDHNDWHLYPIVTLPAAKQLRDAEDLP KNIVSLNACYDRLRKVSLDYLTVNLYGRKQGRAFLLLLQDVLEETTILDYTVQVRQQI LKEIGVSTLNFMEYRSFAKRHLALMLKDFRKNDFQASPASLIMTNEECLKIEDCPHAL LQQYLEQIEKTA" gene complement(364451..365044) /gene="ydgF" /locus_tag="L164461" /db_xref="GeneID:1113971" CDS complement(364451..365044) /gene="ydgF" /locus_tag="L164461" /note="similar to hypothetical YjbK protein Bacillus subtilis" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266516.1" /db_xref="GI:15672342" /db_xref="GeneID:1113971" /translation="MSTNLEIEYKSLLSLAEYDQLKKLFTHVTPVRQTNHYLDSKDFK LRKKKLALRIRTFDKSAEMTLKVPQEVGNIEYNIDLSLEEAQQLLGERNIVCGETDLS EICELLTARDINLEEITLIGSLTTIRYEQHLPIGLAALDKNDYLGHTDYELELEVDDS KQGKKDFFDFLDKNRVEYRFSKSKVVRFLDCLRHLRK" gene 365261..365905 /gene="ydgH" /locus_tag="L165247" /db_xref="GeneID:1113972" CDS 365261..365905 /gene="ydgH" /locus_tag="L165247" /note="similar to YoaT protein of Bacillus subtilis" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266517.1" /db_xref="GI:15672343" /db_xref="GeneID:1113972" /translation="MEKVEEKYHLKDFWDFGLKQFRSAIFGITIILSLIVTTFIKIPH LARYDTLLICVIVIQMILLVSKYERAYDLIPIMVFHVLGMILEIFKVKHGSWSYPDAG LFKIMDVPLYSAFMYSAIGSYIVRAIKEFDLEAINWPHWLMSIGISVLIYFAENIGSY FSAWTYSYQLKAWQFVDLGKISSWTLLIIVSIIIVIELQRYFSKKIKVKNIIKN" gene 366093..366752 /gene="ydgI" /locus_tag="L166082" /db_xref="GeneID:1113973" CDS 366093..366752 /gene="ydgI" /locus_tag="L166082" /note="similar to YjbM protein of Bacillus subtilis" /codon_start=1 /transl_table=11 /product="putative GTP pyrophosphokinase" /protein_id="NP_266518.2" /db_xref="GI:30023987" /db_xref="GeneID:1113973" /translation="MFNWEEFLDPYVQTVGELKIKFRGVRKQYLKKGLYSPIEFVTGR VKRRESIRNKAKLRGYTRENLAEMEDIAGVRVMVQFVDDVWDVLELLRKRKDFKIIEE RDYINNQKASGYRSYHVIVEYPIDTIDGFQIVNAEIQIRTLAMNFWATIEHSLNYKYG GLIPEDVKARLTNAAREAAQLDLEMGEIREDIQEAQLLFDSPQQKQDFKKENGEENEL W" gene 366739..367551 /gene="ppnK" /locus_tag="L166614" /db_xref="GeneID:1113974" CDS 366739..367551 /gene="ppnK" /locus_tag="L166614" /EC_number="2.7.1.23" /note="catalyzes the phosphorylation of NAD to NADP" /codon_start=1 /transl_table=11 /product="inorganic polyphosphate/ATP-NAD kinase" /protein_id="NP_266519.1" /db_xref="GI:15672345" /db_xref="GeneID:1113974" /translation="MNFGKKVWLIGNSSEKSKKTLNKLSKILKAEHFVFDDINPEIVI SVGGDGTLLRAMHMYEYQLDRVRFLGVHTGHLGFYTDFTDEDLFEVVEALYDENPAQA IHYPLIRVQVSFTDGYQIVRHVLNEATIRRASKTMVGDVRISDYLFERFRGDGLSIST PTGSTAYNKSIGGAVVHPRVKAMQVAEIASLNNVVYRTLGSPMIVAEKDTITVCPAPE DDYSLTFDQLTFEYKNIKSIEFSLDGTTISFANCAHTPFWERVSKSFIGEVE" gene 367551..368432 /gene="rluE" /locus_tag="L167555" /db_xref="GeneID:1113975" CDS 367551..368432 /gene="rluE" /locus_tag="L167555" /function="synthesis of pseudouridine from uracil-2650 in 23S ribosomal RNA" /note="RNA synthesis, modification, and DNA transcription; family 2 of pseudouridine synthases" /codon_start=1 /transl_table=11 /product="pseudouridine synthase" /protein_id="NP_266520.1" /db_xref="GI:15672346" /db_xref="GeneID:1113975" /translation="MQFAFRNEIEGSMVKSMLSRHGISRRLLTKVKFDGGKITVNGQE KNAIYRLEKDDLVTVTVPDEPDNEKLIPDDFPLNVLFEDDHYLVVEKPAGKPSITGSL HPTGAMSNAVKGYISQKNYANQTVHIITRLDRDTSGLMFLAKHRYAHALMNQHKFRDT MEKRYFAIVNDQDLPDSGRIDLPIGRRDDSIIQRQVRFDEKAKDALTSYVVAERKNDL ALLDIILHTGRTHQIRVHFSHLGYPLIGDDLYGGNHDLISRQALHCHHLQFLNPFTDE MVHVELDMPEDMKNLLK" gene complement(368474..369304) /gene="ppiA" /locus_tag="L168484" /db_xref="GeneID:1113976" CDS complement(368474..369304) /gene="ppiA" /locus_tag="L168484" /note="translation; protein modification" /codon_start=1 /transl_table=11 /product="peptidyl-prolyl cis-trans isomerase" /protein_id="NP_266521.1" /db_xref="GI:15672347" /db_xref="GeneID:1113976" /translation="MNTNKKNNTILFTIFGIVLVIVVGLLVFFANRPKTTDNTASSTS TSSSQKVDYPTNYKLHDAVKNSTTALNDLTLPQLSTTVAEDEAEVEIKTTAGNINIKL FPKLAPNAVQNFLVLAKNGYYKNNEFFRVIKDFMIQSGDPSNQGTGTASIFGGKTFDT EISNQLYNIRGALALANTGQASSSSSQFFIVQNSQDMTSQIQDKTKYPQKIIDAYKKG GYPSLDGSYTVFGQVISGMDVVDKIAKAEVTSSGSGEASSPVDPVKIKSVKILKNWKF" gene 369615..371048 /gene="lysQ" /locus_tag="L169610" /db_xref="GeneID:1113977" CDS 369615..371048 /gene="lysQ" /locus_tag="L169610" /note="transport and binding protein; amino acids, peptides and amines; there is another lysine specific permease LysP" /codon_start=1 /transl_table=11 /product="lysine specific permease" /protein_id="NP_266522.1" /db_xref="GI:15672348" /db_xref="GeneID:1113977" /translation="MENQNQVKRNLKQRHITMIALGGTIGTGLFLTSGATISQAGPWG AVLAYCFIGIMVYFVMTSLGEMATYLPTSGSFSDYGGRYVDPAFGFALGWNYWLNGAI TIAVDLTTAGLITQFWFPHLPSWIFSGIATVLIFIINVMAVGAFGETEYWLSTIKVIT IVLFLAIGLLTIFGVLGQGNVDVVANLSAGNHGFVGGISGFVGVLLIAGFSFQGTELL GITAGESEDPGKSIPKAMNSIFWRILLFYIFSIIVIAAIINFKDPRLLNPNSTAVMSP FTIVFKNIGFAVAASVMNAVILTSVISSANSVMYASTRILYSLGQEKGAPKFFGRTAK NGIPFYALLATTIICFIAFLTGIFGTQIYLFLVDLSSLTGFLAWLGISISHIRFRRAY IAQGKKLEDLPYKAKWFPFGPIVALLMTAAIAINLDPAMLFSEHWGEGLALYAAIPIF IILYFGYKWKYNTKIIPLEEVDLSREK" gene 371163..371975 /gene="ydhB" /locus_tag="L171116" /db_xref="GeneID:1113978" CDS 371163..371975 /gene="ydhB" /locus_tag="L171116" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266523.1" /db_xref="GI:15672349" /db_xref="GeneID:1113978" /translation="MKFIAIVGTNASFSYNRKLLWYMKKHFTKEAQIEIVEITDLPLF SEDIREIPEGVQKIAEAIREEDGLIFSTPEYDHAITAALKSLIEWLSWIKPQPLNSLP VMIVGVSLGNMGTVFAQENLRQILSSPGLDAFVLPSNQFLLGRAAEAFNQQDELIDER TISWLEHCFNNFMIYSKTLKPMRLPSLKKENNKEIIESEESKNSTETDEVWWTKETNQ GLPVLSDADTGASEYEEVIEPENSAYLQFLEEGETWKFDDIGELRGKSEEED" gene 371975..372952 /gene="ydhC" /locus_tag="L171943" /db_xref="GeneID:1113979" CDS 371975..372952 /gene="ydhC" /locus_tag="L171943" /note="similar to hypothetical protein TP0796 Treponema pallidum" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266524.1" /db_xref="GI:15672350" /db_xref="GeneID:1113979" /translation="MKILEKKSTLKISKTYRALGTVISLTIYGHQDEELLDKTYQLIK YYEQLFTVNRDQSELMAVNHKAGIEPVQVSGAVYGLTKIALEKSKEAFGFNAAIGPLV KLWHIGFSDAKLPTQAEIDEKLKIINPDRIILRDDEFSIFLPEKGMEIDLGAIAKGYI ADRIKDFWHAYGISSGIINLGGNLLLVGEAPHQTDKKWRIGIRNPLTNDKKSVLQLLS GEGSVVTSGISERYLKVNDKIYHHIIDSKTGYPHHNQLASVTILSKKSIDGEIETTRL FFADGPIENWLTENPEVYGAIFISKDKKIKAVGIPQSQIYVADQSFEFE" gene 373134..373424 /gene="ydhD" /locus_tag="L173048" /db_xref="GeneID:1113980" CDS 373134..373424 /gene="ydhD" /locus_tag="L173048" /note="transposon related function" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266525.1" /db_xref="GI:15672351" /db_xref="GeneID:1113980" /translation="MARRKFDKQFKNSAVKLILEEGYSVKEVSQELEVHANSLYRWVQ EVEEYGESAFPGNGTALADAQHKIKLLEKENRYLKEELELLKKFRVFLKRSK" gene 373520..374281 /gene="tra904D" /locus_tag="L0460" /db_xref="GeneID:1113981" CDS 373520..374281 /gene="tra904D" /locus_tag="L0460" /experiment="experimental evidence, no additional details recorded" /note="evidence experimental PMID:1328163; transposon related function; IS3/IS150/IS904 family transposase" /codon_start=1 /transl_table=11 /product="transposase of IS904D" /protein_id="NP_266526.1" /db_xref="GI:15672352" /db_xref="GeneID:1113981" /translation="MHRRPSKQQVEREILSEKIKAVFHEHKGRYGAVRITKVLHNTGI MTNTKRVGKLMHLMGLYAKGSRYKYKHYNRKGASLSRPNLINQIFKATAPNKVWLGDM TYIPTKEGTLYLAVNIDVFSRKIVGWSISSRMQDKLVRDCFLQACGKEHPQPGLIVHT DQGSQYTSSRYQSTLRQVGAQSSMSRKGNPYDNAMMESFYKTLKRELINDAHFETRAE ATQEIFKYIETYYNTKRMHSGLDYKSPKDFEKYNS" gene 374338..374895 /gene="ydhE" /locus_tag="L37953" /db_xref="GeneID:1113982" CDS 374338..374895 /gene="ydhE" /locus_tag="L37953" /note="transposon related function" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266527.1" /db_xref="GI:15672353" /db_xref="GeneID:1113982" /translation="MVKYSIELKQRIIQDYLSGKGGSTYLAKLHNVGSSSQVRHWIRN YRAEGLPTAHSKVNKNYSMELKENAVQCYLTTDLTYEAVARKFEITNFTLLASWVNHF KIYGEVPISKKRGRRKKLESIASSMTQNPNDSQRIKELEQELRYAQIEVAYLKGLRRL EKNALMNKNQDSSTVSVKPSNSKKS" gene 374892..375710 /gene="tra1077C" /locus_tag="L0468" /db_xref="GeneID:1113983" CDS 374892..375710 /gene="tra1077C" /locus_tag="L0468" /experiment="experimental evidence, no additional details recorded" /note="evidence experimental PMID:1328163; transposon related function; IS3/IS150/IS904 family transposase" /codon_start=1 /transl_table=11 /product="IS1077C transposase" /protein_id="NP_266528.1" /db_xref="GI:15672354" /db_xref="GeneID:1113983" /translation="MKVTGFPKATYYYWVNCFERVNKDELIEKEMLKIRQEHANAGYR PMRELLKQRGYHVNHKKVQRLMKKLGLRVTSYWHKSRKYNSYKGKVGTVAKNKLHRRF RTSIPHQKITTDTTEFKYYEDGIQKKCYLNPYIALFNSEVISYHISKQPSYQSIDIAL NQALAVTSDCPYRRTFHSDQGWGYQMRDYVSKLKSHRIFQSMSRKGNCHDNSVMENFF GLLKQEIYYGHIFSSFEELEQVIVIWIRYYNTKRIKQKLNWMSPIQFRLNYQNN" gene complement(375784..377268) /gene="lysS" /locus_tag="L0347" /db_xref="GeneID:1113984" CDS complement(375784..377268) /gene="lysS" /locus_tag="L0347" /EC_number="6.1.1.6" /note="class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1" /codon_start=1 /transl_table=11 /product="lysyl-tRNA synthetase" /protein_id="NP_266529.1" /db_xref="GI:15672355" /db_xref="GeneID:1113984" /translation="MAEIEELNDQMKVRREKMENLREAGIDPFGHKFTRTHNSQELHE AYDEKTKEELHELALSGIVAGRLMTKRGKGKVGFAHLQDREGQIQLYVRKDEVGEENY EIFKKADLGDFLGVEGEIMKTDMGELSIKAKKLTFLSKALRPLPEKFHGLTDTETRYR KRYLDLISNKESFNRFVTRSKIISEIRRYMDGRGYLEVETPVLNNEAGGAAARPFYTH HNSLDIDMALRIATELHLKRLIVGGMEKVYELGRVFRNEGMDMTHNPEFTTMESYEAY ADFEDIMDLTEGIFQHVAKTVVGQDVLEYDGKEINVGGKFKRVHMVDAIKEVAGVDFW PEMTFEEATALAKEHDIHVEKHFTSVGHIINEFFEKYVEETLIQPTFVFGHPKEISPL AKMNEKDPRFTDRFELFINGKEYANAFSELNDPIDQLERFEAQAKAKELGDDEATGVD YDYVEALEHGMPPTGGLGIGIDRLVMLFTGTTSIRDVLLFPTMK" gene complement(377467..378285) /gene="rlrG" /locus_tag="L0220" /db_xref="GeneID:1113985" CDS complement(377467..378285) /gene="rlrG" /locus_tag="L0220" /note="LysR-family regulators" /codon_start=1 /transl_table=11 /product="LysR family transcription regulator" /protein_id="NP_266530.1" /db_xref="GI:15672356" /db_xref="GeneID:1113985" /translation="MFALLETFIAVFETKSFTRAANQCFISQPTATVRIKKLEEELKV HLFSRGQHQEVIPTESAHLLYPKALKTLNDWNELQFSLKNQTPSRKPFKIAASHSSAT TVLPLIFKNLIPELEQLNIELMMLDSQEVFDLIRNHEIHFGIIEKPMMDETIETFPLF KDELVLAGNPESDIFFIREAGSGVAHYTHNYLKENNLNPKNLVSVNNNDMIVSQLKAG IGLSLISKRFINENIAFQNLGERYQRIFYGLSFLSEQDKLLKTVIKKIKNLSEF" gene 378449..379444 /gene="ydhF" /locus_tag="L178384" /db_xref="GeneID:1113986" CDS 378449..379444 /gene="ydhF" /locus_tag="L178384" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266531.1" /db_xref="GI:15672357" /db_xref="GeneID:1113986" /translation="MSILPGFLLSFAIAIVSYLLNRFIFHSLGSATIAILLGIILGNL YFKQVTLFAGTAWSEKKLLEFSVMFLGATVTFQTIGKLGFSGVGFILIQMISTIIFVL FMGKKLGFSANVSALMASGNAVCGSSAIAAVEPVIGAETSEKRTSIAMVNLMGTILML SLPFLGTWMFGNNDLLRGALIGGTEQSVGQVVASATMVNPNTTTLATLFKIMRIIMLV FVVLYFGFRSKKQKRNEQGPTQIKIKRNSFLPWYVLGFLVLCTLDTLIHFVPEVSATA KFLSGWCETIALAAIGLRLNLVEFIKAGKKLLIYGLSTLVFQVVLALILISLLIK" gene complement(379657..380601) /gene="ldhB" /locus_tag="L0018" /db_xref="GeneID:1113987" CDS complement(379657..380601) /gene="ldhB" /locus_tag="L0018" /EC_number="1.1.1.27" /note="glycolysis; similar to malate dehydrogenase" /codon_start=1 /transl_table=11 /product="L-lactate dehydrogenase" /protein_id="NP_266532.1" /db_xref="GI:15672358" /db_xref="GeneID:1113987" /translation="MKITSRKVVVIGTGFVGTSIAYSMINQGLVNELVLIDVNQDKAE GEALDLLDGVSWGQENVIVRAGDYKDCKNADIVVVTAGVNQKPGQSRLDLVNTNAKIM RSIVTQVMDSGFDGIFVIASNPVDILTYVAWETSGLDQSRIVGTGTTLDTTRFRKELA TKLEIDPRSVHGYIIGEHGDSEVAVWSHTTVGGKPILEFIVKNKKIGVEDLSNLSNKV KNAAYEIIDKKQATYYGIGMSTARIVKAILNNEQAILPVSAYLRGEYGQEGVFTGVPS IVNQNGVREIIELNIDAYEKKQFEKSVSQLKEVIESIK" gene complement(380895..381716) /gene="rlrD" /locus_tag="L0217" /db_xref="GeneID:1113988" CDS complement(380895..381716) /gene="rlrD" /locus_tag="L0217" /note="LysR-family regulators" /codon_start=1 /transl_table=11 /product="LysR family transcription regulator" /protein_id="NP_266533.1" /db_xref="GI:15672359" /db_xref="GeneID:1113988" /translation="MFSLFETFIVVYETKSFTLAGKYLFISQPTVTVRIKKLEEELKS TLFLRGKHQEIIPTEAAILFYPKAIAYLKKWEEDQAEVQKKSLAKHPFKIGVSHSAAL SIMPGIFKVFEGELEHLDVEINMYDSEKVFELVANHDLHFGIIERLLISDQTETFPLF LDELVLAGNTDSETFFTRESGSGIGYYIKRYLKSAPSAQRNIVRMNSNEMIISHIKAG LGSSLISKSFLTDDIPYQELGSNYHREFLGVSFDEEKDPMIQKLISKIKKETEIH" gene 381871..382845 /gene="ydiA" /locus_tag="L181867" /db_xref="GeneID:1113989" CDS 381871..382845 /gene="ydiA" /locus_tag="L181867" /note="similar to exfoliative toxin A; transport and binding protein; tellurite resistance protein or related permease" /codon_start=1 /transl_table=11 /product="permease" /protein_id="NP_266534.1" /db_xref="GI:15672360" /db_xref="GeneID:1113989" /translation="MMYSKFISFLKQIPLPICGLILGLISLGNLLYSKGYPILGNSYD MLGLFLMFLILLKIVLAMKHTISTLNDPIVASVSPTFTMSLMVLSVFLKRLSGFSLLA NVTWWTALILHLILMMYFIYLHVLPKELKIHDVYPSWFITFVGIGVISATSPDFGLEV GKVVVWITLLFYFILLPIVMHRVFILRKMHKSLLPLITIITAPGSLGLVGYLTVVEAK SKIFVIFLFILSQAIYFITLGLLTKLLRSAFYPSYAAFTFPLVISATAVNLTSKLSVF QFLNLELLANMEILIAIAIVTYVLIRYCIFLGSKLVQIMSEKYSPESI" gene 383134..384354 /gene="ydiB" /locus_tag="L183112" /db_xref="GeneID:1113990" CDS 383134..384354 /gene="ydiB" /locus_tag="L183112" /note="Required for the synthesis of the thiazole moiety" /codon_start=1 /transl_table=11 /product="thiamine biosynthesis protein ThiI" /protein_id="NP_266535.1" /db_xref="GI:15672361" /db_xref="GeneID:1113990" /translation="MTVLYDEIMVRYGELSTKGKNRGYFINRLAKNIREVLADMPELK ITAVRDRAHIELNGADYAEVSNRLTKVFGIQNFSPSIKVEKSMPIIKEEVVALFKEIY SEGQTFKIATRRADHNFELDSTELNIALGDVVFDNFSYAKVQMKKPDITLRAEIRQDA AYLSFEDIKGAGGMPVGTAGRGHLMLSGGIDSPVAGYLALKRGVEIEAVHFASPPYTS PGALKKAKDLAAKLTVFGGSITFIEVPFTEIQEEIKAKAPQAYLMTITRRFMMRVVDR VREERGGKVIINGESLGQVASQTLGSMSAINEVTNTPVIRPVVTMDKNEIIEIAEKID TFNLSILPFEDCCTVFAPPSPKTNPKLENCIQYEKRMDVEGMVDRAVKGIMLTTIIGE NWDQTEEEEFADFL" gene 384568..385971 /gene="ydiC" /locus_tag="L184516" /db_xref="GeneID:1113991" CDS 384568..385971 /gene="ydiC" /locus_tag="L184516" /note="transport and binding protein; multidrug resistance" /codon_start=1 /transl_table=11 /product="efflux pump antibiotic resistance protein" /protein_id="NP_266536.1" /db_xref="GI:15672362" /db_xref="GeneID:1113991" /translation="MSDRIKALIALGIFTFMSTLDGSIVNIALPTMSKELHVSTSQIT WVVTIYLIVISAIVLIFGRLGDLIGKSRIARIGWGIFILGSALAGLNFGWGLGFLLFA RVIQAIGASMFMATGFGIISEIFPPESRARALSISAMFVSVGSIAGPALGGLILQVAS WNYIFWINVPIGILAWIFGNHALPKEKTSGKWSDIDFKGGTLMTSVIVLLFLALNFGQ ALGWTNPLIIIGALLGFILFGIFILTEKKVAQPLLDLGIFKSKLFSMSIIMALFNFTV AMFSSILLPFYLQDFRNYGPGLAGMIMMAYPVAMLIASPLAGSAADKMDKEIVTFVGI SGIVLSQLGYLLINPHSAPWLVVVILLIQGMSMGIFQSPNNALIMETVDRKYLGIAGS VNSLARNMAFVLGTSLATLILFTAMSNQLGYKVTTYLHNQPDVFLHGFHVAFYFSTFL VLVTWVLGLFRLLGRKK" gene 386132..386737 /gene="ydiD" /locus_tag="L186107" /db_xref="GeneID:1113992" CDS 386132..386737 /gene="ydiD" /locus_tag="L186107" /note="fatty acid and phospholipid metabolism" /codon_start=1 /transl_table=11 /product="acyl carrier protein phosphodiesterase" /protein_id="NP_266537.1" /db_xref="GI:15672363" /db_xref="GeneID:1113992" /translation="MSKLLVVKGHPLTADYSLSLKGLDAFVKAYKAAHPEDEIEELDV FSADIPTLNTELVSAMFAGENAELTASQKDKLARFAGFTEQFLSADKVVIANPMYNLM IPAELKSWVDTVNVAGKTFKYTAEGPVGLANGKKVLHLQANGGVYGAQDPATIYMSAI FNFIGSDFRQIAVEGHAYDPEKTEELLSEFINKVELEAQTF" gene 386834..387268 /gene="ydiE" /locus_tag="L186839" /db_xref="GeneID:1113993" CDS 386834..387268 /gene="ydiE" /locus_tag="L186839" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266538.1" /db_xref="GI:15672364" /db_xref="GeneID:1113993" /translation="MVKHLFNSHIDWVGGRNSIGDLQAGALNEKISIPKTMDGPGVGT NPDEMLLGAASTCYSITLAAMLERNDILLEHLKVDAKGIVDVTKGTFTYEKITYHVAM KLTKESDEVKAIKLAKRAESSCMISRAIQGNIELETIIRIEK" gene complement(387304..389346) /gene="ydiF" /locus_tag="L187315" /db_xref="GeneID:1113994" CDS complement(387304..389346) /gene="ydiF" /locus_tag="L187315" /note="transort and binding protein, cations" /codon_start=1 /transl_table=11 /product="Na+/H+ antiporter" /protein_id="NP_266539.1" /db_xref="GI:15672365" /db_xref="GeneID:1113994" /translation="MLHIIFYVIVFLLVLVFSNVLNKVFPKLALPLIQVVLGLILGFF GADEVLHVAPEFFLGFIIAPLLFRESEEADVKHILKHSKIILVLIFPLVFITTLGLGL ISNWIYMGLPLAACFALGASLAPTDAVAVGALSKNFSFPRRVMSVLQGEGLLNDASGI ISFQIALVALVTGYFSFPDATMKLVISALGGAAIGFTLIYIKGLVLRLLEDVDARDVS GYLLLELVVPLAAFLISEELHVSGIIAAVVAGVMSANGLKRTTLFDAQVEKLKSTIWD TLTFILNSFVFLFLGIELYQLVVPLLVDPVYSSALLIVLALALTAGLFALRFIVIAFY YWLRSLKQKQPFSAYWNDVFLLTFAGSKGTVSIATILLVPRTVDVQPVLVFLAAAVTG LSFLVGMFILPFFAVKKVSKVNNISKIAILSEVVDELHQDMKSAKNPQGYDIAIDAYQ ERIQQLIIEQESTDMAIDYNDLQLLIIRIESEGLEVALRENKISMYTYRTYQRYIRSL ETSIVHSLVSSIQFVYVIALRAFHLLTSRVLHVDFYFKKTKAAMETTRDEITELYFNN TELILQALDNLNGVFDEQLLNFLQSERLRTSEIVATGGHISRMMNKAQPNNITEMMRA YYLERKVIFEHELSGAITAREAKDMRLNVNILEDYSLASNHHTLLFDFLERRKNKN" gene complement(389437..389907) /gene="ydiG" /locus_tag="L189448" /db_xref="GeneID:1113995" CDS complement(389437..389907) /gene="ydiG" /locus_tag="L189448" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266540.1" /db_xref="GI:15672366" /db_xref="GeneID:1113995" /translation="MIDKKFEDKLNKLREMYINKRPEESEKLDDSKKFEAFMALSDEE KEEKLNAKLELLTDKLVTLDEKLGDLLAKNASADDISELKYYIDAVKNKKLILEQKLE LIKNGEFDAARKERVKRQLTDLELKRCKALLGKKDCSKINEKIALKKKAINRLK" gene complement(390031..391290) /gene="tyrS" /locus_tag="L0359" /db_xref="GeneID:1113996" CDS complement(390031..391290) /gene="tyrS" /locus_tag="L0359" /EC_number="6.1.1.1" /note="catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr)" /codon_start=1 /transl_table=11 /product="tyrosyl-tRNA synthetase" /protein_id="NP_266541.1" /db_xref="GI:15672367" /db_xref="GeneID:1113996" /translation="MNIFDELKARGLVFQTTDEAALSKALTEDMVSYYVGYDPTADSL HLGNLVLILTMKRLQMAGHKPYALVGGATGLIGDPSFKDSERSLQTKDTVTKWSGKIR SQLERFLDFENGENKAEMTNNYNWFENLTFIDFLRDVGKHFTVNYMISKDSVKSRMES GISYTEFAYQIMQGYDFYELNQLHNVTLQLGGSDQWGNMTAGTELLRRKANKQGHVIT IPLITDSTGKKFGKSEGNAIWLDADKTSPYEMYQFWLNVDDADAVKMLKIFTFLSLEE IAEIEEQFEAARHERLAQKVLAREVVSLVHGKAAYEQAVKTSEILFGGGDLRQLDAKS ILTGLKAAPQHQVTDDEDLTLVELLISAGIAPSKRQAREDITNGAIYINGERVQALDY VITDSDKIENRLTVIRRGKKKNFVLTY" gene 391435..393840 /gene="pbp1B" /locus_tag="L191431" /db_xref="GeneID:1113997" CDS 391435..393840 /gene="pbp1B" /locus_tag="L191431" /note="cell envelope, murein sacculus and peptidoglycan" /codon_start=1 /transl_table=11 /product="penicillin-binding protein 1B" /protein_id="NP_266542.1" /db_xref="GI:15672368" /db_xref="GeneID:1113997" /translation="MKKSSIDSQEEARARLKEKMENKRRKQSKSLSKNPKDNDEKSGW SITFKVVRGLIVIFGIIFALVGVFGAATGVGYFARLVEQTKTPNKTEMLAKINDIHGV SVINYSNGQAISDISSDLVRVTVKSDEISPNVKNALIATEDDSFKTNKGVVPKAVVRG ILGSVGGGTSSGGSTLTQQLIKQQVLGDSVTFQRKASEIVYALKLNSYLSKDQILTDY LNVSPFGRNNKGQNIAGIQEASLGIFGKSAKDLTIPEAAFIAGLPQSPIVYSPYAADG SLKSKENMSYGLERQKEVLFYLYRGGYISEADYKKYKAYDISTEFLQPGVAQSQEHGY LYNVVYNEAITDIYNYLIKRDKVSATDLGNDSTKQRYRELAEQSLQNGGYTVTTTINQ QVYDAMQNAVTNYSGLMQDGTGLIQTGNVLMDNKTGAVYGFIGGLDFSQSQVNHAFDT KRSPGSSIKPILAYGPAIDMGLMGSASVLSNYPAKYSSGQDIEHVGNKGTEMMPFSEA LNVSYNIPAYWTYQTILNKGKSVEPYMTKMGYDVADYSVESLPLGGGIDPTVVQHTNG YQTLANGGKYEPWYIVDSIKDDTGNVIYQHQSTGGTQVYSEATSTIMEYMLQDAIKSQ KTSKFYGELQSLNSSLATNVQWAGKTGTTDNYTDVWMMLSTPSVTLGSWAGHDDNSAM SQNSGFINNAKFTANLVNAINAADPNIFGPGQKFTDPNSDPNVTKSKVLVSTGEKPGK VNVKLSNGKTQEVNLGGDTTTSFWATKSGAPTTTYDFSIGGSASDIAAGWKKILPNYN FGQ" gene complement(393898..394965) /gene="pepA" /locus_tag="L193909" /db_xref="GeneID:1113998" CDS complement(393898..394965) /gene="pepA" /locus_tag="L193909" /experiment="experimental evidence, no additional details recorded" /note="evidence experimental PMID:8535515; degradation of proteins, peptides, and glycopeptides" /codon_start=1 /transl_table=11 /product="glutamyl aminopeptidase" /protein_id="NP_266543.1" /db_xref="GI:15672369" /db_xref="GeneID:1113998" /translation="MELFDKVKALTEIQATSGFEGSVRDYLKTRMIALGYQPEFDGLG GIFVTKTSKVANAPRIMIAAHMDEVGFMVSSIKADGTFRVVPLGGWNPLVVSGQRFTL FTRTGKKIPVVTGGLPPHLLRGTGVTPQIPAISDIVFDGAFENAAEATEFGIAQGDVI IPETETILSANGKNIISKAWDNRYGCLMILELLGFLADKELPATLIIGANVQEEVGLR GAKVSTTMFKPDLFFAVDCSPASDTFGDDNGRLGEGTTLRFFDPGHIMLPGMKNFLLE TADKAKVKTQVYMAKGGTDAGAAHLANNGVPSTTIGVVARYIHSHQTIFNIDDFNQAQ TFLRNIVTSLSTEKVAEIKNY" gene 395161..395352 /gene="ydjB" /locus_tag="L195067" /db_xref="GeneID:1113999" CDS 395161..395352 /gene="ydjB" /locus_tag="L195067" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266544.1" /db_xref="GI:15672370" /db_xref="GeneID:1113999" /translation="MIHELTDRARQHFSTRKIDAFWIFEEPTTGALFEGGLVSENKAI TFEINAKTLEVFEKNEKIL" gene 395394..395711 /gene="trxH" /locus_tag="L195348" /db_xref="GeneID:1114000" CDS 395394..395711 /gene="trxH" /locus_tag="L195348" /note="thioredoxin, glutaredoxin, and glutathione; similar to the thioredoxin H-type from plants" /codon_start=1 /transl_table=11 /product="thioredoxin H-type" /protein_id="NP_266545.1" /db_xref="GI:15672371" /db_xref="GeneID:1114000" /translation="MIIPENIENLAELVKGPEKTVFFFTAGWCGDCNFIKPKMPEIEV ENPDFKFVEVDRDEYMDLAIEWGIMGIPSFVVIEDGKEKARLVNKLRKTKEEVNTFLA SAK" gene 395797..396423 /gene="ydjD" /locus_tag="L195751" /db_xref="GeneID:1114001" CDS 395797..396423 /gene="ydjD" /locus_tag="L195751" /note="similar to YtpR of Bacillus subtilis and phenylalanine tRNA ligase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266546.1" /db_xref="GI:15672372" /db_xref="GeneID:1114001" /translation="MIATYNTNVGDVLMLITANDKGEKVNFERKGKVARVFIEETGAT VAWNIFEAKSLLANLSGNGQVVLSSDDIETLNKELGKSGFSDVLVHDAQPKFVVAEIV EMEDHPDSDHLHICKVNVGFADPVQIVCGAPNAALGLKTVAALPGAMMPNGSLIFPGA LRGVQSYGMLCSARELELPNAPEVRGIIELSSDLSAGKAFDSETMWQA" gene 396586..397926 /gene="noxE" /locus_tag="L196579" /db_xref="GeneID:1114002" CDS 396586..397926 /gene="noxE" /locus_tag="L196579" /note="aerobic energy metabolism" /codon_start=1 /transl_table=11 /product="NADH oxidase" /protein_id="NP_266547.1" /db_xref="GI:15672373" /db_xref="GeneID:1114002" /translation="MKIVVIGTNHAGIATANTLIDRYPGHEIVMIDRNSNMSYLGCGT AIWVGRQIEKPDELFYAKAEDFEKKGVKILTETEVSEIDFTNKMIYAKSKTGEKITES YDKLVLATGSRPIIPNLPGKDLKGIHFLKLFQEGQAIDEEFAKNDVKRIAVIGAGYIG TEIAEAAKRRGKEVLLFDAESTSLASYYDEEFAKGMDENLAQHGIELHFGELAQEFKA NEKGHVSQIVTNKSTYDVDLVINCIGFTANSALAGEHLETFKNGAIKVDKHQQSSDPD VSAVGDVATIYSNALQDFTYIALASNAVRSGIVAGHNIGGKSIESVGVQGSNGISIFG YNMTSTGLSVKAAKKIGLEVSFSDFEDKQKAWFLHENNDSVKIRIVYETKNRRIIGAQ LASKSEIIAGNINMFSLAIQEKKTIDELALLDLFFLPHFNSPYNYMTVAALNAK" gene 398016..398405 /gene="ssbA" /locus_tag="L0299" /db_xref="GeneID:1114003" CDS 398016..398405 /gene="ssbA" /locus_tag="L0299" /note="binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA" /codon_start=1 /transl_table=11 /product="single-stranded DNA-binding protein" /protein_id="NP_266548.1" /db_xref="GI:15672374" /db_xref="GeneID:1114003" /translation="MNKTMLIGRLTSAPEISKTTNDKSYVRVTLAVNRRFKNEKGERE ADFISIIIWGKSAETLVSYAKKGSLISIEGEIRTRNYTDKQNQKHYVTEILGLSYDLL ESRATIALRESAIKTEETLLDAEELPF" gene 398525..398809 /gene="groES" /locus_tag="L198515" /db_xref="GeneID:1114004" CDS 398525..398809 /gene="groES" /locus_tag="L198515" /experiment="experimental evidence, no additional details recorded" /note="10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring" /codon_start=1 /transl_table=11 /product="co-chaperonin GroES" /protein_id="NP_266549.1" /db_xref="GI:15672375" /db_xref="GeneID:1114004" /translation="MLKPLENRVVLRVKEEEEKSMGGIVLTSASQEKPQTAEVVAVGE GKTNHHGTLISPLVKVGDTVIFEKFAGTTVKMDGEEFLILKDSDLLAIVE" gene 398897..400525 /gene="groEL" /locus_tag="L198893" /db_xref="GeneID:1114005" CDS 398897..400525 /gene="groEL" /locus_tag="L198893" /experiment="experimental evidence, no additional details recorded" /note="60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth" /codon_start=1 /transl_table=11 /product="chaperonin GroEL" /protein_id="NP_266550.1" /db_xref="GI:15672376" /db_xref="GeneID:1114005" /translation="MSKDIKFSSDARTAMMRGIDILADTVKTTLGPKGRNVVLEKSYG SPLITNDGVTIAKEIELEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVREG LKNVTAGANPVGIRRGIELAAETAVASIKEMAIPVHDKSAIAQVATVSSRSEKVGEYI SDAMERVGSDGVITIEESKGMQTELDVVEGMQFDRGYLSQYMVSNTEKMVAELDNPYI LITDKKISNIQEILPLLEQILKTNRPLLIVADDVDGEALPTLVLNKIKGVFNVVAVKA PGFGDRRKAQLEDLAILTGGTVITEELGLDLKDATLEALGQAAKATVDKDHTTIVEGA GSADAISDRVAIIKAQIEKTTSDFDREKLQERLAKLAGGVAVVKVGAATETELKAMKL LIEDALNATRAAVEEGIVSGGGTALVNAIAALDKLSEEGDIQTGINIVRRALEEPVRQ IAANAGYEGSVIIDKLRSEEVGTGFNAATGQWVNMIEEGIVDPAKVTRSALQNAASVA GLILTTEAVVANKPEPAAPAMPPMDPSMGMGGMM" gene complement(400571..401383) /gene="yeaA" /locus_tag="L582" /db_xref="GeneID:1114006" CDS complement(400571..401383) /gene="yeaA" /locus_tag="L582" /note="similar to yycJ Bacillus subtilis" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266551.1" /db_xref="GI:15672377" /db_xref="GeneID:1114006" /translation="MTEQNGFKYSILASGSTGNSFYLETPKKKILVDAGLSGKKIESL LSEIDRDIHDIDALLITHEHSDHIKGIGVLARKYGIDLYANEDTWSELDSKNALGKIP VEQKHLFEMGKTMTFGDIDIESFGVSHDAIAPQFYRFMKDNKSFVMLTDTGYVSDRMR GTIENADAYLMESNHDIEILRMGAYPWRTKQRILSDQGHLSNEDGAEAAFSIHGNKTK RIFLGHLSLNNNIKELAHLTMDGYLQQHDVDTKKDLKILDTSHEHASQLYDI" gene complement(401554..402996) /gene="kinC" /locus_tag="L0124" /db_xref="GeneID:1114007" CDS complement(401554..402996) /gene="kinC" /locus_tag="L0124" /experiment="experimental evidence, no additional details recorded" /note="evidence experimental PMID:9172368; two-component systems" /codon_start=1 /transl_table=11 /product="sensor protein kinase" /protein_id="NP_266552.1" /db_xref="GI:15672378" /db_xref="GeneID:1114007" /translation="MIKFFNSMIFKGVVAHLLLFVILFMSSFDYNFAHLSTFIGYYLF SLVFVLVFLNQQHRMIVNVSKQMNDIKNGYLNRDKIPKGTSEINELYDEILKLGEDIV RTQNNLENQRNQLDSILAYMVDGVIATDRRGNIIMANKSALHYLNTDNDLLMQKNIVE VLKITDQYNFYDLLEKEPEITIETHDSGNESISLHIKFALFRRESGFISGIIAVLHDM TEQDKAERERRLFVSNVSHELRTPLTSVKAYLEALEDGAIEDKETASSFINVSLTETN RMIRMISDLLTLSRMDQDRIVLNKEMINLIAFLDYQINRLDQILETESNDLISSNFTL VRKYSEQPIWVEIDTDKIAQVIDNIIGNAIKYSPKGGTITISVEKRESDVLISISDQG MGIPKSDLLKIFDRFYRVDNASRNSKVGGTGLGLSIVHDIVKIHGGTIFASSEGEGKG TTFSFTLPYSLEAADDWDDGTDEFEFEDNE" gene complement(402989..403690) /gene="llrC" /locus_tag="L0125" /db_xref="GeneID:1114008" CDS complement(402989..403690) /gene="llrC" /locus_tag="L0125" /experiment="experimental evidence, no additional details recorded" /note="evidence experimental PMID:10708382; two-component systems; involved in acid stress resistance development" /codon_start=1 /transl_table=11 /product="two-component system regulator" /protein_id="NP_266553.1" /db_xref="GI:15672379" /db_xref="GeneID:1114008" /translation="MKKILVVDDEKPISDIVKFNLTKEGFEVFTAFDGEEALEAFKEV QPDLILLDLMLPKLDGLDVAREIRKTSDTPIIMVSAKDSEFDKVIGLELGADDYVTKP FSNRELLARIKANLRRINVAPAESTDNVKKELIIGNLRINPAHYAAYKNDKQLDLTHR EFELLYYLAQHLGEVITRENLLETVWGYDYFGDVRTVDVTVRRLREKVEDTPSRPQYV STRRGVGYYMSNPHD" gene 403868..404503 /gene="tmk" /locus_tag="L3846" /db_xref="GeneID:1114009" CDS 403868..404503 /gene="tmk" /locus_tag="L3846" /EC_number="2.7.4.9" /function="pyrimidine ribonucleotide biosynthesis" /note="catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP)" /codon_start=1 /transl_table=11 /product="thymidylate kinase" /protein_id="NP_266554.1" /db_xref="GI:15672380" /db_xref="GeneID:1114009" /translation="MNGILISLEGPDGAGKTTVLKEILPEIQKMKREIVPTREPGGVR VAEEIRQIILDPKNTDIDSKTELMLFAAARRLHMQEKMLPALQAGKVVIVDRFIDSSV AYQGYGRDLGVEVVDWLNYFATDGLKPDLTLYFDVDTDVALERIMKNRADEVNRLDLE RAEMHRKVREGYLEIVVKEPERFVKIDASQPLEKVVADTLSVLKKRFVSEF" gene 404636..405496 /gene="holB" /locus_tag="L0280" /db_xref="GeneID:1114010" CDS 404636..405496 /gene="holB" /locus_tag="L0280" /EC_number="2.7.7.7" /note="catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA." /codon_start=1 /transl_table=11 /product="DNA polymerase III subunit delta'" /protein_id="NP_266555.1" /db_xref="GI:15672381" /db_xref="GeneID:1114010" /translation="MEIKDIQPQLYKQFSTILQHGKLSHAYLFSGGFGSFELAIWLSQ ALFCENPENALPCGHCRSCRLVAQQEFTDLHIVEPDGQTIKTAQIRELTQVFNESGYE GNQQVLLIKEAEKMHPNAANALLKSIEEPETEIVVFLLTDNENMILQTIKSRTQIINF PKNVQYLQDFLEKNGILKTQAELLAEICNSTDKALELAQQSWFNEGLQRLQQFVKLLK TSADEAFLYLKELVEIFDDKEKQNQAFELLLQLFNQERMSQELLKTFQAIKMWKSNVR FESSLTFLVL" gene 405548..406330 /gene="yeaC" /locus_tag="L5532" /db_xref="GeneID:1114011" CDS 405548..406330 /gene="yeaC" /locus_tag="L5532" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266556.1" /db_xref="GI:15672382" /db_xref="GeneID:1114011" /translation="MIYEIKFAHGESNVFAISDIELAPQTEVILRSDKGNFYGKIVRE ISEEANLEIHHTIVREVNEDDLQVIAKLEERSKQAKDKVRQLVIEQGLEMKIIDVAYN FDQMQLFISFTAENRVDFRLLLRELATTFRIRIELRQIGPRDAAKIHGGLGPCGRPLC CSEFVYEFPNVSIKMAKNQNLSLKQNKLNGLCGRLMCCLTYEDSFYKEAQQLFPDFGE FVTTSEGKGKVVGLNVLKNRVKIRFGEYSKDFELAEIEVNHG" gene 406323..406649 /gene="yeaD" /locus_tag="L6328" /db_xref="GeneID:1114012" CDS 406323..406649 /gene="yeaD" /locus_tag="L6328" /note="in Bacillus subtilis this protein is involved in the negative regulation of DNA replication initiation; interacts with DnaN and DnaA" /codon_start=1 /transl_table=11 /product="DNA replication intiation control protein YabA" /protein_id="NP_266557.1" /db_xref="GI:15672383" /db_xref="GeneID:1114012" /translation="MADKYNVFDQLGELENTLNTTLTQISGIRQVLESSMTENATLRM ELEKLRDRLAEFEKKEVKKETPKDQPNPNLIQIFNEGFHVCHLHYAERLAEGESCLDC LELLYR" gene 406649..407524 /gene="yeaE" /locus_tag="L6615" /db_xref="GeneID:1114013" CDS 406649..407524 /gene="yeaE" /locus_tag="L6615" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266558.2" /db_xref="GI:30023988" /db_xref="GeneID:1114013" /translation="MENKFSIQRSFKGLKTAGSLYLVPTPIGNMQDMTLRSLETLKTV DLICSEDTRNTLRLLNHFEIKVPQESFHEHNSQEKIPKLIDFLKKGQSIAQVSDAGMP SISDPGHDLVLAAIDEGIDVIALPGASAGITALIASGLVPQPHIFYGFLPRKKGEQQK FLKSKLSYPETQIFYESPFRVGDTLANMQEIYGDREVVLVRELTKIYEEYRRGKISEV LESLTDQPIKGECLIIVSGADEVAQEVQEPELTALEAVKVLVEQSVKPNVAIKQIAKE RGLNRQELYAEFHDL" gene complement(407601..407792) /gene="yeaF" /locus_tag="L7612" /db_xref="GeneID:1114014" CDS complement(407601..407792) /gene="yeaF" /locus_tag="L7612" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266559.1" /db_xref="GI:15672385" /db_xref="GeneID:1114014" /translation="MENQYEILQSLIEKMEIVTVGSAVSKTKLNRKEIIDFVRSQHSL RIFDEENQKWINENVDGHC" gene complement(407855..408787) /gene="yeaG" /locus_tag="L7866" /db_xref="GeneID:1114015" CDS complement(407855..408787) /gene="yeaG" /locus_tag="L7866" /note="fatty acid and phospholipid metabolism" /codon_start=1 /transl_table=11 /product="mevalonate kinase" /protein_id="NP_266560.1" /db_xref="GI:15672386" /db_xref="GeneID:1114015" /translation="MTINKMGTGIAHSKLILIGEHSVVYGQPAIALPVTILKTTVTIT SSKYGQYIENNEFRRRLDLMGDEFEGIRQLIMRLLSKFHSSKMPFSLEIDSNIPQGRG LGASASLATAIIRAFYDFFDAELPQKDLLFYANFSENITHGKSSGIDVATVNSEHPLW FIKDSTIEPFELNLHGFIVIGDTGVHGFTSQAINIVREKLVEEKEKTQDSINHLGQLA TDSKDFLMTDKLKEFGHVMNKAHERLSDLGVSHPRLDNLVETARKNGALGAKLTGSGL GGVMVALAENEKDAIRISQRLLKNGAKNTWIYSF" gene 409093..410049 /gene="yeaH" /locus_tag="L9089" /db_xref="GeneID:1114016" CDS 409093..410049 /gene="yeaH" /locus_tag="L9089" /note="fatty acid and phospholipid metabolism" /codon_start=1 /transl_table=11 /product="diphosphomevalonate decarboxylase" /protein_id="NP_266561.1" /db_xref="GI:15672387" /db_xref="GeneID:1114016" /translation="MKNIVTARAHTNIALIKYWGKADIALNIPTTSSLSMTLEPFYTT TSVEFTDNESDSLILNSEVADSSRVSQFLEMMRGQYGNFPKVMIQSENHVPTAAGLAS SASSFAALTAAMFGLLDLEKDDSEMSRIARRGSGSASRSIFGNFSVWNKGEDHQSSFA ESFYNEDIGLSMIVAEISAEKKKMSSTKGMQLAQTAPTYSAWVEKSAIQLEEMKQAIL NADIEKVGLVAQDNALGMHEQNRLSNQPFDYFTHETRHVIDFVNQAYQSGLLAFVTID AGPNVKIITDHATEKVLLAKLQAEFPELTFDIARAGGAYEYL" gene 410036..411025 /gene="yebA" /locus_tag="L10014" /db_xref="GeneID:1114017" CDS 410036..411025 /gene="yebA" /locus_tag="L10014" /note="fatty acid and phospholipid metabolism" /codon_start=1 /transl_table=11 /product="mevalonate kinase" /protein_id="NP_266562.1" /db_xref="GI:15672388" /db_xref="GeneID:1114017" /translation="MNISEKKMSIKVPGKLFFAGEYSVTKEGNLALITTIETNFEVRI SATTGKSIFKTNVGLSDFEFSLSKIEFTKENPWNFALTALKNTLSAADSFEKKSVSKI LSSSPEISLEIVSDLGFGENKKGYGSSASVVCGLVNAVNQFFDFQLSLEKRFEIAAKT HFEVQGSGSMGDIAAIMYGGSVFYQNHKRVIPLEIPWATYVVQTGKAAKTSEKIKIKL SDEFYQASNELVIELATAIDIQDFALFKEKLSENQLLLLENIPEGYMTKELAIALNLL NSYPEFAAKISGAGFGENIILFAQNTQAIAEVQNKLSEYGINLEKFKVAQKNN" gene 411078..412121 /gene="yebB" /locus_tag="L11083" /db_xref="GeneID:1114018" CDS 411078..412121 /gene="yebB" /locus_tag="L11083" /EC_number="5.3.3.2" /note="catalyzes the isomerization of isopentenyl pyrophosphate to dimethylallyl diphosphate" /codon_start=1 /transl_table=11 /product="isopentenyl pyrophosphate isomerase" /protein_id="NP_266563.1" /db_xref="GI:15672389" /db_xref="GeneID:1114018" /translation="MKTEKEIHQHRKDEHLSLAYKYWREEKNQTSGLTFSDSRIIPNS LPELSTKKINFSSEVFGQNFEFPFYIEAMTGGTERADKINAQLAEIAKNQHLAMAVGS QSIALKFPELAAGFSEVRKIHSSGFLFANIGAGHSLENAKRAVDMIEANALEIHVNTA QELPMDEGDREFYWLENINEIASQLEVPVVVKEVGFGISQKTFKALAKTSVSGINIGG AGGTNFAWIERKRSKNGFNLDEFGLSTLESLLEAKMADNRKSLIATGGITSAQEIFKS LILGADLSSSAGFILKNLMQTGPEKVEEVIEQWKQDLNKLFVLTGSKNIEECRKVELL YSINMLNFIQQRK" gene 412279..412899 /gene="sodA" /locus_tag="L12227" /db_xref="GeneID:1114019" CDS 412279..412899 /gene="sodA" /locus_tag="L12227" /experiment="experimental evidence, no additional details recorded" /note="evidence experimental PMID:7665513; cellular processes, detoxification" /codon_start=1 /transl_table=11 /product="superoxide dismutase" /protein_id="NP_266564.1" /db_xref="GI:15672390" /db_xref="GeneID:1114019" /translation="MAFTLPELPYAPNALEPFFDEATMRLHHGKHHQTYVNNLNAAIE KHNELDDLSLEELLTDLSAIPEDIRTAVRNNGGGHLNHSQFWLWLRPNTDGSENHADG EIGDAIAKEFGSFETFKTEFKAAATGRFGSGWAWLVVDEAGKLKVVSTANQDNPISEG LTPVLGLDVWEHAYYLKYHNVRPDYIEAFFNLVNWDKVNELYAKAK" gene 413148..415502 /gene="cstA" /locus_tag="L13150" /db_xref="GeneID:1114020" CDS 413148..415502 /gene="cstA" /locus_tag="L13150" /note="adaptations and atypical conditions; peptide utilization during carbon starvation" /codon_start=1 /transl_table=11 /product="carbon starvation protein" /protein_id="NP_266565.1" /db_xref="GI:15672391" /db_xref="GeneID:1114020" /translation="MKDIGNSSNFTEEEELFLLRNKQGKIVGIKDLKQANFQETMKDW KKHLPKPSLLSIIIWVAVALLGGLAWSLIALAQGETINAIWFVIAAVCSYLIGYRFYA LYIQRKIMRPNDLRATPSESHNDGKEFDPTNRVVLFGHHFASIAGAGPLVGPVLAAQM GYLPGTIWIIFGVIFAGGVQDMLVLWYSHRRRAKSIGAMAHDEVGRFAGGLTSFIVFI MTMIVLAVLALICVTAMANSAWAVFSIGMTIPIALLMGIYLKYIRPGHVNEISAIGFI LLLVAIFGGRWVSESSFAHIFMLSPTALVWWVMGYTFIAAIIPAWILLTPRDYLSMFM KIGTIAVLAIAVVGVRPDVTIPALTNFAHNTDGPAFAGSLFPFLFVTIACGALSGFHV MMSSGTTPHLIAKESQTRMIGYGGMLFESFVAIMALVAAISLNPGIYYSMNTPQASIQ KLAASSYQADKSAEYNAAKAIPNVAMMPDGSKLSIDWEGTTGEKALEQVAKDVGEQSI VSRTGGAPTLAVSMSNILHKVPLIGGTNMMGFWYHFAIMFEVLFILSAVSAATKSTRY LLNDALRGFKKLGRLGDDDWLPSKIITTAVIVGVWGALLLMGVSDPNGGIKIMYPLFG ISNQLIAAVALAIVCVMVIRKGYLKWVWIPALPLVWDVCVTFAASWQKIFSNDVNIGY FASYSAAKAQVASGKLSGLALTNAQATMRNTMIQGSLSVIFLLCVAILLVICAFKVAK ILRTNEVGDKFSSEEVFEESNLFETSSFWPSKLEHKVLKSKVNE" gene 415804..417144 /gene="rheB" /locus_tag="L0340" /db_xref="GeneID:1114021" CDS 415804..417144 /gene="rheB" /locus_tag="L0340" /note="RNA processing; putative ATP-dependent RNA-binding protein with helicase activity; similar to other DEAD box family helicases" /codon_start=1 /transl_table=11 /product="ATP-dependent RNA helicase" /protein_id="NP_266566.1" /db_xref="GI:15672392" /db_xref="GeneID:1114021" /translation="MKFTDFNFKDYINQTLENIKFEKPTEVQEKLIPIVLSGRDLVGE SKTGSGKTHTFLLPIFQKIDTDLDEVQAVITAPSRELATQIYKAAQEFTKVNDKLRVS NFVGGTDKARQIKKLESSQPHVVIGTPGRIHDLIKSNALIVHTANTFVVDEADMTLDM GFLADVDQIASSFGKRVQMLVFSATIPQKLQPFLKKYLHNPVMQKIANKTVISDTIEN WLVSTKGSSHNQLLLQLTKATNPYMAMIFANTKGRVDDIHHFLTSNGLKVAKIHGDVP PRERKRIMNSIKNLDYQYVVATDIAARGIDIEGVSHIINDEIPKDLTFFVHRVGRSGR NGLQGTAITLYSPSDDSSIREIEKMGVTFQPKAIKDGEIVDSYDRDRREKRTKKQDEI STKTIGALKKGKKHVKPGYKRAIKWQIEEDNKKKRRAERNKNARKTRDSRKQSF" gene 417148..417732 /gene="yebE" /locus_tag="L17153" /db_xref="GeneID:1114022" CDS 417148..417732 /gene="yebE" /locus_tag="L17153" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266567.1" /db_xref="GI:15672393" /db_xref="GeneID:1114022" /translation="MKKTFKIIGAFVGLILLIPVICLALILSKSTDRTAENSTDIKTI LVLGSRINQNKKPAKITQERLDAALLLAKNNPQAKIIVSGAKGADEPVSEAFSMKNYL ITHHIRADRIISEDKAGDTAENIAYSKKYFDGKTVIVTSDFHLYRALYLAKQEGVKVE GFAAKTKVNNLLYYPNYYGHEILGLIYAFVFGKG" gene 417888..418634 /gene="yebF" /locus_tag="L17893" /db_xref="GeneID:1114023" CDS 417888..418634 /gene="yebF" /locus_tag="L17893" /note="RpiR family of transcription regulators" /codon_start=1 /transl_table=11 /product="transcription regulator" /protein_id="NP_266568.1" /db_xref="GI:15672394" /db_xref="GeneID:1114023" /translation="MMFLPEQISKLNELETLVFDFIIKSPEEVQQMTIRDLASQAHVS TSTIVRLCTKLGFEGWSDLKFYLKNQLKEKTPEEQHYDNMLEFNMFLRRMNTDNYQAK LNNAAQMIAKADYTVFLGLGTSGSLSEYATKYFVNTGLRSFVISDPFQAVQVQGMGNV VAVIMSVSGETEQVVNKELEFKAGGAKIISITNNEDCTVAKLADYQLSYNLVNEWSKQ YPLGNLTTQLPVLAILEILAHKSIDYHLKK" gene 418876..419202 /gene="ptcB" /locus_tag="L18872" /db_xref="GeneID:1114024" CDS 418876..419202 /gene="ptcB" /locus_tag="L18872" /EC_number="2.7.1.69" /note="transport and binding protein; PTS system" /codon_start=1 /transl_table=11 /product="cellobiose-specific PTS system IIB component" /protein_id="NP_266569.1" /db_xref="GI:15672395" /db_xref="GeneID:1114024" /translation="MADKVIALACAAGMSTSLLVSKMQKAAADNGKDYEIFAKSTADI DNMLAGTGSPKPDVLLLGPQVAFMKGEVAKKAEIAGVPMDVIKMQDYGMMRGDKVLAA AENLMN" gene 419287..419637 /gene="ptcA" /locus_tag="L19292" /db_xref="GeneID:1114025" CDS 419287..419637 /gene="ptcA" /locus_tag="L19292" /EC_number="2.7.1.69" /note="transport and binding protein; PTS system" /codon_start=1 /transl_table=11 /product="cellobiose-specific PTS system IIA component" /protein_id="NP_266570.1" /db_xref="GI:15672396" /db_xref="GeneID:1114025" /translation="MTDKYENPTSDDYMGVVMGIIMSGGNAKGLAFQAIQQAKAGEFA EAESSLNEASEQLREAHDVQTDLLTRLAQGEKIGWNLYMVHAQDHLMNAITFKDLAVE VVGQEQRLQALENK" gene 419728..420459 /gene="yecA" /locus_tag="L19721" /db_xref="GeneID:1114026" CDS 419728..420459 /gene="yecA" /locus_tag="L19721" /note="RpiR family of transcription regulators" /codon_start=1 /transl_table=11 /product="transcription regulator" /protein_id="NP_266571.1" /db_xref="GI:15672397" /db_xref="GeneID:1114026" /translation="MMSFFGNVDFQKLTYTERTCYSYLRDNVDKIPYMRVRDIALEAH VGTSSVMRLIHKMGYDSYTDFKEYIIDKKELEKGSSNTAIPFSLDIFSNDIEQRLDNL AHRVIESDNIIFTGVGSSGLICDYAARRLAGVGINTFSFSDVTYPIASKLPNTTNTLV IALSISGETNEIIEVLTSLRSNKDVYISCITPKLNSSIAELSDFVLTYRINEHRINTH YDLTSQLPTVYLTERLTDLVYQLSN" gene 420751..420945 /locus_tag="L200013" /db_xref="GeneID:1114027" CDS 420751..420945 /locus_tag="L200013" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_835291.1" /db_xref="GI:30023989" /db_xref="GeneID:1114027" /translation="MNNFIQNKIMPPMMKFLNTRAVTAIKNGMIYHYWFSILDSWSIA IPSRPRLHEQNQIGPTLFTN" gene 420905..422074 /gene="ptcC" /locus_tag="L20847" /db_xref="GeneID:1114028" CDS 420905..422074 /gene="ptcC" /locus_tag="L20847" /EC_number="2.7.1.69" /note="transport and binding protein; PTS system" /codon_start=1 /transl_table=11 /product="cellobiose-specific PTS system IIC component" /protein_id="NP_266572.1" /db_xref="GI:15672398" /db_xref="GeneID:1114028" /translation="MNKIKLGPLFLQINNASFGIMALLAVFGIAYAWVRDAGYEGVPA GLTGIIVHILLQPDTIHQVTSVTDPTKVSTAYQVGGVIDRAWLGGKGMVLSIIVGLLV GWIYTGFMRRNITIKMPEQVPENVAASFTSLVPAGAIIALAGVVHGITTIGFNTTFIE LVYKWIQTPLQHVTDGPVGVFVIAFMPVFIWWFGVHGATIIGGIMGPLLQANSADNAA LYKAGHLSLSNGAHIVTQSFMDQYLTVTGSGLTIGLVIFLLVSAKSVQGKTLGRMEIG PAVFNINEPILFGLPIVLNPILAIPFILAPLISGILTYLVIYLGIIPPFNGAYVPWTT PAVLSGYLVGGWQGMVWQVIILALTSLLYWPFAKAYDNILLKEEAETEAEINAAE" gene 422156..423592 /gene="celA" /locus_tag="L22116" /db_xref="GeneID:1114029" CDS 422156..423592 /gene="celA" /locus_tag="L22116" /EC_number="3.2.1.86" /note="converts 6-phospho-beta-D-glucosyl-(1,4)-D-glucose to glucose and glucose 6-phosphate; required for cellobiose uptake and metabolism" /codon_start=1 /transl_table=11 /product="6-phospho-beta-glucosidase" /protein_id="NP_266573.1" /db_xref="GI:15672399" /db_xref="GeneID:1114029" /translation="MTLKKDFLWGGAVAAHQLEGGWNAGGKGVSVADVMTAGSNGVER KITDGVIEGENYPNHEAIDFYHRYKEDIALFDELGLNCFRTSIAWTRIFPNGDEAEPN EEGLQFYDDLFDECLKHGIEPVITLSHFELPYHLVTEYGGFRNRKLIDFFVHFSEVVM NRYKDKVKYWMTFNEINNQANYLRDFAPFTNSGLKFPEGASEKEREEMMYQAAHYELV ASAKVVALGHKINPDFQIGCMIAMCPIYPATCKPEDMMASTVAMQRRYWFADVHVRGH YPSYLKAYFDRKEFKLDILDDDLKALEEGKVDYIGFSYYMSFAIKDHGKAPTFDYNED KDLVKNEYVKASEWGWQIDPLGLRYAMNWFYERYEKPLFIVENGFGAVDEVEADGSIH DPYRVDYLKAHIEAMKNAVDYDGVDLMGYTPWGFIDLVSAGTGEMKKRYGVIYVDKDN EGNGTLERSKKDSFTWYQKVIATNGEEL" gene 423878..424159 /gene="yecD" /locus_tag="L23787" /db_xref="GeneID:1114030" CDS 423878..424159 /gene="yecD" /locus_tag="L23787" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266574.1" /db_xref="GI:15672400" /db_xref="GeneID:1114030" /translation="MQAKYRGQLVEVWKISHRPIHEIWVRQAFEQERLSWNEWNKNVL NFESISGDLALVGDFLIQKDGRRFHVVSRENVQRDLVFMDTETNFKIGN" gene 424317..424387 /locus_tag="L200091" /db_xref="GeneID:1113548" tRNA 424317..424387 /locus_tag="L200091" /product="tRNA-Cys" /db_xref="GeneID:1113548" gene 424521..426485 /gene="ligA" /locus_tag="L0304" /db_xref="GeneID:1114031" CDS 424521..426485 /gene="ligA" /locus_tag="L0304" /EC_number="6.5.1.2" /note="this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB" /codon_start=1 /transl_table=11 /product="NAD-dependent DNA ligase LigA" /protein_id="NP_266575.1" /db_xref="GI:15672401" /db_xref="GeneID:1114031" /translation="MNIESKIKELTEKLNQYAYEYYTLDEPSVEDSEYDRLYQELVKL EAENPQLTRADSPTHRTGGVILDGFVKFRHPYNLYSLGDVFSREELAVWEERVRKEIA NPEYICELKIDGLSLSLYYENGLLMTAATRGDGTTGENITENVKRIKDVPLKLKEAID IVVRGEAYLPRKNFAKLNKERELEGATPFANPRNAAAGTLRQLDTKIVAKRGLATFLY QEASPATNDTQEEVLEYFEELGFQVNPERKFARNMDEIWEFIEEATRLRDELPYDIDG VVVKVNNLAEQEELGFTVKAPRWAIAYKFPAEQAETEILSVDWTVGRTGVVTPTANMT PVLLAQTTVARATLHNVDYIEEKDIRIGDHVLIYKAGDIIPKVGKVLLDKRPEGLEGL EIPTKCPECGSELIHFEDEVALRCVNPLCPAQIREKLIHFASRDAMNIVGLGPSVISQ LFDKKLVADVADLYQLTIEDLLTLDKVKETLAQKIVSAIAQSRENSAEKLLFGLGIRH VGGKAAKLLLERFANLRALSKATEEEISEIPSLGGVIATAVVSYFETDGAKILLDELE NAGVNFDYLGAVNIEGILSGKTVVLTGKLTTLKRSEAKEKLEALGANVSGSVSKKTDL VVAGEEAGSKLTKAQDLGIEIWSEQDLLDL" gene 426638..427666 /gene="yecE" /locus_tag="L26628" /db_xref="GeneID:1114032" CDS 426638..427666 /gene="yecE" /locus_tag="L26628" /note="similar to YegS from E. coli" /codon_start=1 /transl_table=11 /product="putative lipid kinase" /protein_id="NP_266576.1" /db_xref="GI:15672402" /db_xref="GeneID:1114032" /translation="MMKARLIYNPTSGQEIIKKYIADILDKLEQYGYEASAYQTTAEQ DSAKKEAARATEAGFDLIIAAGGDGTINEVVAGISPFEKRPQLAIVPTGTTNDFARAL KIPRGKPLEAIEIIGKNQILNIDVGHAVIRETQDEQYFINIAAGGGLTELTYSVPSHL KTAFGYLAYLAKGAELLPRVRKAPVRVVHDEGVFEGDISMFFAALTNSVGGFEKIAPD AKLDDGLFTLILVKTDNLFELIALLAIVANGKHLDDVNLEYIKTSKIEIEALGGQKIL LNLDGEYGGDAPVQFDNLKGHLDMYVNLDEINDDHYLGDEETLALEAVAQKFAEEANK IKDEDEED" gene 427883..429019 /gene="msmK" /locus_tag="L27865" /db_xref="GeneID:1114033" CDS 427883..429019 /gene="msmK" /locus_tag="L27865" /note="transport and binding protein, carbohydrates; organic alcohols and acids" /codon_start=1 /transl_table=11 /product="multiple sugar ABC transporter ATP-binding protein" /protein_id="NP_266577.1" /db_xref="GI:15672403" /db_xref="GeneID:1114033" /translation="MTTLSLDKIYKKYPNATQYAVEDFNIDIKDKEFIVFVGPSGCGK STTLRMVAGLEDITEGEFKIDGKIMNDVAPKDRDIAMVFQNYALYPHMTVFDNMAFGL KLRKFKKDEIKRRVEEAGTILGLSDLLDRKPADLSGGQRQRVAMGRAIVRDAKVFLMD EPLSNLDAKLRVSMRTEIAKIHRRIGATTIYVTHDQTEAMTLADRIVIMSSSPNSDKT GTVGRVEQIGTPQELYNEPANKFVAGFIGSPAMNFFNVKVASGKLTNNEGLNMDLPEG KAKLLKEQGYEGKEVILGIRPEDIQASNLAQQAYPNQTIEAEVVVSELLGAETMLYLR AGSTEFVSRVEARDFRNPGEKITVALNLNKSHFFDAQTEHRIID" gene 429327..432899 /gene="nifJ" /locus_tag="L29321" /db_xref="GeneID:1114034" CDS 429327..432899 /gene="nifJ" /locus_tag="L29321" /note="electron transport; oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin which reduces nitrogenase" /codon_start=1 /transl_table=11 /product="pyruvate-flavodoxin oxidoreductase" /protein_id="NP_266578.1" /db_xref="GI:15672404" /db_xref="GeneID:1114034" /translation="MKKTMDGNMAAAHIAYAFSEIAVIYPITPSSPMADYTDAWSVAG RKNIWGSTVKITELQSEAGAAGAMHGVLKAGGLATTYTASQGLLLMLPNMYKMAGELL PAVIHVAARAVAAGALNIFGDQSDVMSARITGFAMLAESSVQEVMDLSAVAHLATLEG SVPFLNFFDGFRTSHEIQKIDVIDYQDLLPMVNQEKLADFRDRAMNPDHPTVSGTNQN ADIYFQQRETVNSYYEALPEIVQKYMGKINKLRGTDYDLVNYYGAPDATEVIVSMGSV AGTIEQTVDYLNEQGRKVGFINVHLYRPFPLENFLEKLPKTVKSVAVLDRTKESGSNG EPLFLDVQSALFNSNVKQVIGGRYGIGGKDTRPEHIVSVFDELVKAQPKRMFTIGIND DVTNLSLTNSRVLDLTPADTFQAKFWGFGSDGTVGANKAAIKIIGDHTDKYVQAAFEY DSKKSGGLTISHLRFGDSPITSEYMTATLDFVACHNMTYVRKYNLTKGLKAGGLFLLN TSWNLEQLSKNLPNEMKKFIAENQIRFYTIDAMKIAHETGMERRINTIMQVAFFKLAH VMPFDEAYEILKKDAQKYAKKSPTIVEQNLNAMALALNGLHEVKIPESWAETQEEKTK VLTTESSRKKYVFEIVNKTNAFEGDELSVQTLVDNKMTFGDEPLGTSASEKRVIALEI PEWNAQACIQCNECSFVCPHAAIRPFLVDEDEWNQAPEGFHVMDYKGADGLKYRIQVS VEDCTGCGLCVEACPKKGEALKMIPYEGQEKESVNWAFAQTLKTKENPARPGTIAASQ FEKPLFEFSGACSGCGETPYIKLLTQMFGDRMMISNATGCSAIYGGTQATPYTTNEFE QGPAWSNSLFEDNAEYGYGMWLASQTRRQKLAAQVLEALPEMSDDLQKLAKDWVEHLE DSEGTRARAEKMKGMLASEHFNSAKLDEIYKQKDQFVKPTQWIFGGDGWAYDIGFGGL DHIVASGADVNILVMDNEVYANTGGQVSKATPASAIAQFAAGGKSNTKKDLGAMLMTY GDVYVAQIASGANMMQTIRTFDEAEKFKGPSVIIAYTPCISHGLYGGIHLALDEAKEA VNSGYWQLYRYNPLLEDLGKNPMILDFKKPDFSKVRDFLLTQSRFGNLLKVDAEHAES LYAKAAKDSRKRFMRYARTSGDLDKYLEREAKALAKKILNQRGL" gene 433205..434083 /gene="yedA" /locus_tag="L33187" /db_xref="GeneID:1114035" CDS 433205..434083 /gene="yedA" /locus_tag="L33187" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266579.1" /db_xref="GI:15672405" /db_xref="GeneID:1114035" /translation="MTDFNQFFNLEFWQKIFELNESPLRIAIAILDIAIISFFLYQAI RFVQGTKLMTLVRGVIIFIFIRIIAGLIGLTTVEWLLNQVITYGVIAGVIIFQPEIRR ALESLGRTTTLFTPTRKSSPDGHISAYEKSFAYMSERKIGALIAIEQGQNLNEFVSTG IRLDADITSELLINIFIPNTPLHDGAVIVQGNKIAVTSAYLPLTEKSGISKQFGTRHR AAIGLSEVSDALILVVSEETGGISIAHNGEFFADISKEKFHDILVAILVPKVEKNEKG TGKNRKNKAGGKKNGK" gene 435077..436435 /gene="glmM" /locus_tag="L35068" /db_xref="GeneID:1114036" CDS 435077..436435 /gene="glmM" /locus_tag="L35068" /note="amino sugars" /codon_start=1 /transl_table=11 /product="phosphoglucosamine mutase" /protein_id="NP_266580.1" /db_xref="GI:15672406" /db_xref="GeneID:1114036" /translation="MGKYFGTDGVRGEANVELTPEMAFKLGRFGGYVLSQHELGTPKV YVGRDTRISGQMLASSLISGLLSVGIEVYDLGVIATPGVAYLVKKDGASAGVMISASH NPALDNGIKFFGGDGYKLEDEKELEIEALIDAEEDTLPRPSAQGLGMLHDYIEGVRKY QAFLKTTAEGNFEGYKVVLDTANGAAYTSARAVFADLEANLTVIGENPDGLNINVKVG STHPEAMAKKVVETGSDLGLAFDGDADRLIAVDENGEIVDGDKIMFIVGKYLLGQGKL AQDTLVTTVMSNLGFHLALEEAGINSVITAVGDRYVVEEMKKNNYNFGGEQSGHMIFL DYNTTGDGQLSAIQLLKVMRETGKSLSELASEVTIYPQKLVNVRVKDNAAKKSAMDVP AIQKVISEMETSMNGKGRILVRPSGTEPLLRVMAEAPTHEEVNHVVDTIVEVVEAEIG VK" gene complement(436511..437227) /gene="rgrA" /locus_tag="L0150" /db_xref="GeneID:1114037" CDS complement(436511..437227) /gene="rgrA" /locus_tag="L0150" /codon_start=1 /transl_table=11 /product="GntR family transcription regulator" /protein_id="NP_266581.1" /db_xref="GI:15672407" /db_xref="GeneID:1114037" /translation="MKKYEVILQDLEKKIFNDIYKTNDILPSENELSANYESSRSTVR QALKILEEKGLIQRRHGYGSIVLAHDRLLFPISGLTSYKELQTSMGFHSETEVIRFER LEINPKLSETTGFAVGEHAISILRRRKVDGKFSILDWDLFLEKYSEGLTPEHAKISTY DYLEDTLGLDIAYAQKEVTIDFACEDDFKYLDLNPKDHHVVSVKSHVYLADNTLFQYT ESRHQVDRFRFTEFARRQKR" gene 437338..437823 /gene="yedE" /locus_tag="L37338" /db_xref="GeneID:1114038" CDS 437338..437823 /gene="yedE" /locus_tag="L37338" /note="similar to C part of PTS protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266582.1" /db_xref="GI:15672408" /db_xref="GeneID:1114038" /translation="MFGIGKKKELKDDKELYNPVSGEVIELSKVNDPVFSKKIMGDGF AVEPKENKIFAPVSAKVTLVQGHAIGFKRADGLDILLHLGIDTVALKGAPFKIKVKVD DIVNGGDELGTVDWGQIEAAGLDKTTMVIFTNTKDLLSGFEVKYGSANARDELGQASV K" gene 437921..439525 /gene="yedF" /locus_tag="L37906" /db_xref="GeneID:1114039" CDS 437921..439525 /gene="yedF" /locus_tag="L37906" /EC_number="2.7.1.69" /note="transport and binding protein; PTS system" /codon_start=1 /transl_table=11 /product="beta-glucoside-specific PTS system IIABC component" /protein_id="NP_266583.2" /db_xref="GI:30023990" /db_xref="GeneID:1114039" /translation="MKCFIDNEAKGELMANYSQLATDIIANVGGAENVTKVIHCITRL RFTLKDKDKADTAAIEALPGVAGAVYNSNLNQYQVVIGQAVEDVYDEVVEQLGDAVVD DEATAQAVAVTAPANGKKQNPIVHAFQVVIGTITGSMIPIIGLLAAGGMINGLLSIFV KGNRLIEVIDPASSTYVIISTLAMTPFYFLPVLVGFSAAKQLAPKDTVLQFIGAAVGG FMINPGITNLVNAHVGTNAAGKNVVVEAAAPVANFLGVTFNTSYFGIPVALPSYAYTI FPIIVAVAIAKPLNAWLKKVLPLALRPIFQPMITFFITASIVLLLVGPVISTISSGLS FVIDHILSLNLGIASIIVGGLYQCLVIFGLHWLVVPLISQELAATGASSLNMIVSFTM LAQGVGALTVFFKSKKADLKGLSAPAAISAFCGVTEPAMYGINLKYVRVFIMSSIGAA IGAGVAGFGGLQMFGFSGSLIGFPNFISNPLTHHAPAGNLMLFWIATAVCAVATFLLV WFFGYKDTDVMGEGVEQKNAFKDAVK" gene 439593..441902 /gene="yeeA" /locus_tag="L39593" /db_xref="GeneID:1114040" CDS 439593..441902 /gene="yeeA" /locus_tag="L39593" /note="similar to Lactococcus lactis ATCC 19435 protein Y18267" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266584.1" /db_xref="GI:15672410" /db_xref="GeneID:1114040" /translation="MTEKDWIIQYDKKEVGKRSYGQESLMSLGNGYLGLRGAPLWSTC SDNHYPGLYVAGVFNRTSTEVAGHDVINEDMVNWPNPQLIKVYIDGELVDFEASVEKQ ATIDFKNALQIERYQVKLAKGNLTLVTTKFVDPINFHDFGFVGEIIADFSCKLRIETF TDGSVLNQNVERYRAFDSKEFEVTKISKGLLVAKTRTSEIELAIASKSFLNGLAFPKI DSENDEILAEAIEIDLQKNQEVQFDKTIVIASSYESKNPVEFVLTELSATSVSKIQEN NTNYWEKVWSDADIVIESDHEDLQRMVRMNIFHIRQAAQHGANQFLDASVGSRGLTGE GYRGHIFWDEIFVLPYYAANEPETARDLLLYRINRLTAAQENAKVDGEKGAMFPWQSG LIGDEQSQFVHLNTVNNEWEPDNSRRQRHVSLAIVYNLWIYSQLTEDESILTDGGLDL IIETTKFWLNKAELGDDGRYHIDGVMGPDEYHEAYPGQEGGICDNAYTNLMLTWQLNW LTELSEKGFEIPKELLEKAQKVRKKLYLDIDENGVIAQYAKYFELKEVDFAAYEAKYG DIHRIDRLMKAEGISPDEYQVAKQADTLMLIYNLGQEHVTKLVKQLAYELPENWLKVN RDYYLARTVHGSTTSRPVFAGIDVKLGDFDEALDFLITAIGSDYYDIQGGTTAEGVHI GVMGETLEVIQNEFAGLSLREGQFAIAPYLPKSWTKLKFNQIFRGTKVEILIENGQLL LTASADLLTKVYDDEVQLKAGVQTKFDLK" gene 442048..442713 /gene="pgmB" /locus_tag="L0001" /db_xref="GeneID:1114041" CDS 442048..442713 /gene="pgmB" /locus_tag="L0001" /EC_number="5.4.2.6" /experiment="experimental evidence, no additional details recorded" /note="evidence experimental PMID:9084169; glycolysis" /codon_start=1 /transl_table=11 /product="beta-phosphoglucomutase" /protein_id="NP_266585.1" /db_xref="GI:15672411" /db_xref="GeneID:1114041" /translation="MFKAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQL KGVSREDSLQKILDLADKKVSAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKD LRSNKIKIALASASKNGPFLLEKMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGV APSESIGLEDSQAGIQAIKDSGALPIGVGRPEDLGDDIVIVPDTSYYTLEFLKEVWLQ KQK" gene complement(442772..443578) /gene="yeeB" /locus_tag="L42784" /db_xref="GeneID:1114042" CDS complement(442772..443578) /gene="yeeB" /locus_tag="L42784" /note="energy metabolism, sugars; similar to beta-1,4-D-xylanase of Butyrivibrio fibrisolvens" /codon_start=1 /transl_table=11 /product="sugar hydrolase" /protein_id="NP_266586.1" /db_xref="GI:15672412" /db_xref="GeneID:1114042" /translation="MIFLSTLFWYNKLMNKSTFSLNDTAWVDFYQLQNPRQNENYTFP AIIICPGGGYQHISQRESDPLALAFLAQGYQVLLLNYTVMNKGTNYNFLSQNLEEVQA VFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSEQIHRPKGVILCYPVTSFTFG WPSDLSHFNFEIENISEYNISEKVTSSTPPTFIWHTADDEGVPIYNSLKYCDRLSKHQ VPFEAHFFESGPHGVSLANRTTAPSDAYCLPSVHRWVSWASDWLERQIKN" gene 443651..444346 /gene="yeeC" /locus_tag="L43651" /db_xref="GeneID:1114043" CDS 443651..444346 /gene="yeeC" /locus_tag="L43651" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266587.1" /db_xref="GI:15672413" /db_xref="GeneID:1114043" /translation="MKKIIYSIGLISLLNFGTIAYGETATGTSASSGDATAQSSTGTS STSNSASSASSSSQNTSSSEGTNSTSQNQTQTSTTAQNQTDNVGQNQTPPVVENRDSS TDKNSGSQKETKNSTTIINETVNNNAKGNNILLMTLTSLSASVTIIGGIIAFVRHLRG RGKKKNPVSKAQSSKNGKTPSNSMTAEPSVSSKKTPNEEKVLTETQQINMQADELLKN HKKQQKEYRRRRR" gene 444288..444488 /gene="yeeD" /locus_tag="L44267" /db_xref="GeneID:1114044" CDS 444288..444488 /gene="yeeD" /locus_tag="L44267" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266588.1" /db_xref="GI:15672414" /db_xref="GeneID:1114044" /translation="MNCSKIIKNNKKNIVAEEDKKPFKVFYFAQIFEKLSVKFTDSFY FKDCDNEGDKLFEVATLKFSKV" gene 444575..445000 /gene="yeeE" /locus_tag="L44542" /db_xref="GeneID:1114045" CDS 444575..445000 /gene="yeeE" /locus_tag="L44542" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266589.1" /db_xref="GI:15672415" /db_xref="GeneID:1114045" /translation="MLQFAQKLGRKLEAQDVIVLTGELGAGKTTFTKGLALGLEIHQM VKSPTYTIVRSLEGRLPLHHMDVYRIGDDPDSFDLDDYLFGDGVSVIEWGEMLGDDLP KDYLEVIFDKYSKDLVNDQEREIILKPHGKRYEELVNNL" gene 444997..445515 /gene="yeeF" /locus_tag="L45003" /db_xref="GeneID:1114046" CDS 444997..445515 /gene="yeeF" /locus_tag="L45003" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266590.1" /db_xref="GI:15672416" /db_xref="GeneID:1114046" /translation="MTTELIVREANGADSSRVIEFLNKVGTESNFLTIDEVGILISEA EMTDFLNQQAEKDNNAYFLAFVGDEIAGILHLTADYHYRVRHIAELFIAVSEDYQGYG IGTILLEDALEWVEEVGTIKRLELTVQARNKKARHLYEKFDFELENVKKWGARDENGQ LIDVCEYVLFFD" gene 445619..447004 /gene="yeeG" /locus_tag="L45616" /db_xref="GeneID:1114047" CDS 445619..447004 /gene="yeeG" /locus_tag="L45616" /note="belongs to LytR family" /codon_start=1 /transl_table=11 /product="transcription regulator" /protein_id="NP_266591.1" /db_xref="GI:15672417" /db_xref="GeneID:1114047" /translation="MKLWIKTLLMLGSIILVTAIAAGGYTLTVLNSTTKAFKMTYTNA GNKKTEQVIQATEPLTILLMGVDTGGEGRGTSDSWNGNSDSQILMTLNPKTHTTTMVS IERDTMTNILDADGNIVSKQKMNAAYPLGYNSGSSSDGLKNAVSYAMKTISAQTGINI DSFVTVNFDGLVNMVDNVGGIDINNTTGQTLYISDTEPQYTAKVPPGKQHINGDQALV YTRDRHHLSNGDYGRAAHQREVIAALMKKILALDNITRYEQFLNEASKDFRTNIPINA STITSLLGYKDCFNKVVSIQYEGVGEMVDGASYQFMPTDIYLAMQNIMKKSLDESTVT TLPSSLITYESVFGSGTAPFYYLPSATVTEKGKSTVTYGVDTQGNLVSLNSKNSGNYV STSGGSVQSDSSSGSSSSSSDSTATSSSDSTYQQDNTYNDGYNNSNDSTTSSYGTDDT NTGNYGYGTSQ" gene 447083..447156 /locus_tag="L200092" /db_xref="GeneID:1113549" tRNA 447083..447156 /locus_tag="L200092" /product="tRNA-Arg" /db_xref="GeneID:1113549" misc_feature 447143..484092 /note="Bacteriophage bIL309" /db_xref="taxon:151537" gene complement(447236..448369) /gene="pi101" /locus_tag="L47248" /db_xref="GeneID:1114048" CDS complement(447236..448369) /gene="pi101" /locus_tag="L47248" /note="prophage pi1 protein 01; similar to integrase of Lactococcus lactis phage BK5-T" /codon_start=1 /transl_table=11 /product="integrase" /protein_id="NP_266592.1" /db_xref="GI:15672418" /db_xref="GeneID:1114048" /translation="MARYIKRGKVWQYEISYKDTDGKYKKLRKSGFPKKADAISEAGE IEANLAKGFYTVSQDILLTDHFKQWIEIFKKGKVSDGTYRKYLYTLSVLKKHFSTATI KTMNRVKYQEMLNEFAEGHSDSSVKQINVHVRASLENLLDDFIIKNDFTKGAISKGGK GSKSAELKYLDFEDFTKLIALAKEKINPIYSSSFMIYIAAMTGMRFSELLGLTWDNVD FEKGQIYVKRTWDIYKNNFAPTKNDQSVRFLAIDSSTMQVMINYKEQQEKLLKRLEIE PEHPFVFYNIKNGLITNNSLNKQLRNMCKKLGFKKIITCHGLRHTHASTMLYKGINIL YVSKRLGHSSLNVTMSVYSHILKELEEKDNENIKKIFSEINDE" gene complement(448492..449070) /gene="pi102" /locus_tag="L48504" /db_xref="GeneID:1114049" CDS complement(448492..449070) /gene="pi102" /locus_tag="L48504" /note="similar to orf3 of Lactococcus lactis phage TP901-1" /codon_start=1 /transl_table=11 /product="prophage pi1 protein 02" /protein_id="NP_266593.1" /db_xref="GI:15672419" /db_xref="GeneID:1114049" /translation="MGFKELLKAKSFNEYFDAKKDHQKMEEIKNRTQTDVLKNAGASL IPSSISNFGFKLSKDSISKGFEKKPLNDVTARLESGSELQSRVTMTRLVALGVFAFAA KKKKGGEKYLTIEGPDFVWTAEIKRDKKDIDKAMKFINQVNTNSKIYSKSMQINSSTT SIADELKKFKELLDSGTISQEEFEIQKAKLLK" gene complement(449154..449990) /gene="pi103" /locus_tag="L0250" /db_xref="GeneID:1114050" CDS complement(449154..449990) /gene="pi103" /locus_tag="L0250" /experiment="experimental evidence, no additional details recorded" /note="transcription regulator; evidence experimental PMID:8730874; similar to the repressor protein Rro of Lactococcus lactis phage r1t. cI type regulator" /codon_start=1 /transl_table=11 /product="prophage pi1 protein 03" /protein_id="NP_266594.1" /db_xref="GI:15672420" /db_xref="GeneID:1114050" /translation="MKKIRLPEMIDYFRKENGWTMKEFGEKLGKSESAISKWIKGVRS PMVEDFDKMVNLFNTDPDTLMYGASDLSTTLSEINKISSQLEEPRQKVVLNTATNQLD EQNQEKKKESKVIPINKIPDDLPPYISRKILENFVMPTNTMEYEPDEDMVDVPILGRI AAGLPLDAVENFDGTRPVPAHFLSSARDYYWLMVDGHSMEPKIPFGSYVLIEAVPDVT DGTIGAVLFQDDCQATLKKVYHEIDCLRLVSINKEFKDQFATQDNPAAVIGQAVKVEI DL" gene 450207..450389 /gene="pi104" /locus_tag="L50216" /db_xref="GeneID:1114051" CDS 450207..450389 /gene="pi104" /locus_tag="L50216" /note="transcription regulator; similar to BK5-T phage putative repressor protein Cro" /codon_start=1 /transl_table=11 /product="prophage pi1 protein 04" /protein_id="NP_266595.1" /db_xref="GI:15672421" /db_xref="GeneID:1114051" /translation="MEVLMEQVVTHYGEAIQQHSVEWYKKQLLKDLSVQFIKDSLLPQ LFEWSNAYKAAVELTK" gene 450421..450654 /gene="pi105" /locus_tag="L50391" /db_xref="GeneID:1114052" CDS 450421..450654 /gene="pi105" /locus_tag="L50391" /codon_start=1 /transl_table=11 /product="prophage pi1 protein 05" /protein_id="NP_266596.1" /db_xref="GI:15672422" /db_xref="GeneID:1114052" /translation="MNLEKIKQVKMLDNYEEIKDIVNAHIEMGWIVLLSDSNKVILGA EWPESYNMNFNLTVERKHFGVVGKPGVPGIGVI" gene 450763..450912 /gene="pi106" /locus_tag="L50721" /db_xref="GeneID:1114053" CDS 450763..450912 /gene="pi106" /locus_tag="L50721" /codon_start=1 /transl_table=11 /product="prophage pi1 protein 06" /protein_id="NP_266597.1" /db_xref="GI:15672423" /db_xref="GeneID:1114053" /translation="MPKETKQKLVISATVKTTEEAKKLLDDLEVLKNEYKLNISLSVG TLLIA" gene 451007..451414 /gene="pi107" /locus_tag="L51016" /db_xref="GeneID:1114054" CDS 451007..451414 /gene="pi107" /locus_tag="L51016" /note="similar to tec gene product of bacteriophage r1t" /codon_start=1 /transl_table=11 /product="prophage pi1 protein 07" /protein_id="NP_266598.1" /db_xref="GI:15672424" /db_xref="GeneID:1114054" /translation="MNFISVYLSATSWALCSFEFIRHPPFYSTKQIPQISAHSYYTKE NTKIHTQKGASMAEKKTYEPLDELLDSSGMKYKVIAKKINVPYTTFYKWRINPSRIDA VSAANIAEVIGVDLTDVIFVLKNFNQKLDKLAS" gene 451426..452181 /gene="pi108" /locus_tag="L51420" /db_xref="GeneID:1114055" CDS 451426..452181 /gene="pi108" /locus_tag="L51420" /note="similar to orf5 of the phage r1t" /codon_start=1 /transl_table=11 /product="prophage pi1 protein 08" /protein_id="NP_266599.1" /db_xref="GI:15672425" /db_xref="GeneID:1114055" /translation="MKELQNFTNGIFNLDVKVDGENILFSAEQAAKAMGITQVKNGKE YVKWERVNSYLPNSPEVGKGSFISEPMVYKLAFKANNAVSEKFTDWLAVEVLPTIRKH GAYMTDSKLEEALLNPDTLINLATQLKQEREEKAQLRALNSTLAVENQIMQPKAQYFD DLVERNLLTSFRDTAKMLKVGQKQLIDWLLENKYIYRDKKNKLMPYAQYNNDLFEIKE SKGATNSWKGAQTLITPVGRETFNLLLNEYKAS" gene 452194..452523 /gene="pi109" /locus_tag="L52191" /db_xref="GeneID:1114056" CDS 452194..452523 /gene="pi109" /locus_tag="L52191" /note="similar to orf6 of bacteriophage r1t" /codon_start=1 /transl_table=11 /product="prophage pi1 protein 09" /protein_id="NP_266600.1" /db_xref="GI:15672426" /db_xref="GeneID:1114056" /translation="MEQTLEVQATISVLIPEDKILVDKVEYQELKEKDFDGWVGMDVF IKKSNRSRTTIKNLLNCPEMVKKLSIENGGWVFYPADAGKWSFHYKEMMEFINNEFYQ KFNGGSK" gene 452524..452694 /locus_tag="L200014" /db_xref="GeneID:1114057" CDS 452524..452694 /locus_tag="L200014" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_835292.1" /db_xref="GI:30023991" /db_xref="GeneID:1114057" /translation="MKNTILTSREADAALQTALIDGAKWIITRTSDTVLYQGKTMNFT PLRSGGVLLEVY" gene 452738..452911 /gene="pi110" /locus_tag="L52711" /db_xref="GeneID:1114058" CDS 452738..452911 /gene="pi110" /locus_tag="L52711" /note="transcription regulator; similar to orf8 of bacteriophage r1t, similar to Cro repressor protein of the phage BK5-T" /codon_start=1 /transl_table=11 /product="prophage pi1 protein 10" /protein_id="NP_266601.1" /db_xref="GI:15672427" /db_xref="GeneID:1114058" /translation="MEQEKTINHLGQVVYQESVEFYKEKLSVHSKDFLQNSLIPQLYE WSNAYKAAVELTK" gene 453010..453816 /gene="pi111" /locus_tag="L53019" /db_xref="GeneID:1114059" CDS 453010..453816 /gene="pi111" /locus_tag="L53019" /note="prophage pi1 protein 11; similar to a putative recombinase of the Listeria monocytogenes bacteriophage A118" /codon_start=1 /transl_table=11 /product="recombinase" /protein_id="NP_266602.1" /db_xref="GI:15672428" /db_xref="GeneID:1114059" /translation="MSNQITKTQQTLKSPEVKKKFEEVLGKKTEGFVASLLSVVGNSN LKNADANSVMTAAMKAATLDLPIEPSLGFAYVIPYGREAQFQIGYKGFIQLALRSGQL TGLNCGIVYESQFVSYDPLFEELELDFSQQASGDAVGYFASMKLANGFKKVTYWSKEQ VLAHKKKFVKSANGPWRDHFDAMAQKTVLKAMLTKYAPASIESKMIQTAITEDDSERF ENAKDVTPDEPVISIDESMTSEVSQNEPATESQEQLPEDEVEELFPIGKS" gene 453816..454592 /gene="pi112" /locus_tag="L53819" /db_xref="GeneID:1114060" CDS 453816..454592 /gene="pi112" /locus_tag="L53819" /codon_start=1 /transl_table=11 /product="prophage pi1 protein 12" /protein_id="NP_266603.1" /db_xref="GI:15672429" /db_xref="GeneID:1114060" /translation="MNKRLSFSSLKAFSDCEAEAVAVMAGDWDRQATFSPSTIEAMNA GSYVHKYFESNKALEEFKLEHESDMFTKKGSLKSQFQIAEKMVQTLDHDPLFKTIYQG VKELEIFGKIQGIEFHGFLDCLNLERNIFIDIKTIRGSIRDKEWSEIEYRRVSWIKAR KYLWQMAIYQEILRQSDDEKIGKNISPVIYAVTKETFPDSAGITIPQEWLDDSLDEVC EFTDKYIEVLNGRVPVRCEQCNYCKATKRNIQTISYSDLI" gene 454820..455596 /gene="pi113" /locus_tag="L54802" /db_xref="GeneID:1114061" CDS 454820..455596 /gene="pi113" /locus_tag="L54802" /note="prophage pi1 protein 13; similar to a putative replisome organiser protein Rep2009 of the bacteriophage Tuc2009" /codon_start=1 /transl_table=11 /product="replisome organizer" /protein_id="NP_266604.2" /db_xref="GI:30023992" /db_xref="GeneID:1114061" /translation="MAKTSKKKIYFWLKLDENFFKNIVIKKARKSAGGDTMVLIYQRM MLQSLSNEGVLYYEGALDNLSEELSLSLDEDVEKIQMTLAFFSKYGLIQIDEEQNAEM LQVHAIVDQETDWARYKRNQRSSQKLDNVQSVSNTCPTEIELEKEKDIELKKDIEIRD IDSNSLLSKFLDTFINFSSKNRSKRAVATAEFIKLPSFQREQAVIGAMNYIQSYKNEH PDDEAGQYSVNAVNFLSNMMFMDYQEEVKADAGYDEDLGF" gene 455606..456490 /gene="pi114" /locus_tag="L0311" /db_xref="GeneID:1114062" CDS 455606..456490 /gene="pi114" /locus_tag="L0311" /note="prophage pi1 protein 14; similar to the orf12 of the phage r1t; functional equivalent to DnaC of Escherichia coli or DnaI of Bacillus subtilis, which are required for chromosomal replication" /codon_start=1 /transl_table=11 /product="DNA replication protein" /protein_id="NP_266605.2" /db_xref="GI:30023993" /db_xref="GeneID:1114062" /translation="MQSMADGIREFHKKREVKTGLFCEKHQQTELVRYKHPVSIDYDP LIHGELVDGLQVTSMSYCTECAKEGIYQHHQQSSAEIKANEDFLNKSKYGKYSLLKTQ SLVGKKSLWFARFNTFKVNGLEEQNVLNQAQRIAREYTQGQRFNTVFVGGAGRGKSHL AMAILQEVNENLKDDKFSTLFINISELIREIKNSWNYSDTKAEEERLTTLMRTVDLLV IDDLGTESTFSKDNSWVQGVIYNIYNAREGNTIITSNLTGKEMRSSYDDKIVSRIMEG SKNSVVKFEGITDKRKSK" gene 456487..456651 /locus_tag="L200015" /db_xref="GeneID:1114063" CDS 456487..456651 /locus_tag="L200015" /note="similar to bacteriophage bIL309 Orf16" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_835293.1" /db_xref="GI:30023994" /db_xref="GeneID:1114063" /translation="MKTIIIEQWENEHYPLGSIKKQKLAEKSDHEIIFILNRMAQMPA IVRFGEASEV" gene 456575..457051 /gene="pi115" /locus_tag="L56509" /db_xref="GeneID:1114064" CDS 456575..457051 /gene="pi115" /locus_tag="L56509" /codon_start=1 /transl_table=11 /product="prophage pi1 protein 15" /protein_id="NP_266606.1" /db_xref="GI:15672432" /db_xref="GeneID:1114064" /translation="MRLFLFLIAWLRCLQLLDLEKQVKFEFNFLRKEMINENDNKGTT YGSRIAANNTKQRLRRIACRTAHEWLDQSEEVFEQFHEKHRCDVFVVIYPPKRFKYDP PNYEPTSKALIDGLTDAGIWNDDNYNVIRRTSFEHGGLSGDTKTWKVELVVKELTE" gene 457159..457323 /locus_tag="L200016" /db_xref="GeneID:1114065" CDS 457159..457323 /locus_tag="L200016" /note="similar to bacteriophage bIL309 Orf18" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_835294.1" /db_xref="GI:30023995" /db_xref="GeneID:1114065" /translation="MTTQKEKNVLDFKDKDILKNHKVADKDDEWFHEQWKNKLSGLKE AGDGKVRKNL" gene 457298..457660 /gene="pi116" /locus_tag="L57295" /db_xref="GeneID:1114066" CDS 457298..457660 /gene="pi116" /locus_tag="L57295" /note="similar to orf18 of bacteriophage r1t" /codon_start=1 /transl_table=11 /product="prophage pi1 protein 16" /protein_id="NP_266607.1" /db_xref="GI:15672433" /db_xref="GeneID:1114066" /translation="MARLEKIYDVYFNGIKMGTGTKKELSKMLLVSPHSVAGWVKNGM ANSPKNNAVKIAVVNEKAMMEKYPGWKPYGGSKSKISDEITDRDRRKHETKEERRLRR NIRAQMAIEAARKEELGL" gene 457854..458060 /gene="pi117" /locus_tag="L57860" /db_xref="GeneID:1114067" CDS 457854..458060 /gene="pi117" /locus_tag="L57860" /codon_start=1 /transl_table=11 /product="prophage pi1 protein 17" /protein_id="NP_266608.1" /db_xref="GI:15672434" /db_xref="GeneID:1114067" /translation="MTVESLLKVIEEGMTVILKTEKNRIIVQFECGNDIEAFSCGFLY RKIKIIKIKNGSELIAILEDTKND" gene 458053..458325 /gene="pi118" /locus_tag="L58038" /db_xref="GeneID:1114068" CDS 458053..458325 /gene="pi118" /locus_tag="L58038" /codon_start=1 /transl_table=11 /product="prophage pi1 protein 18" /protein_id="NP_266609.1" /db_xref="GI:15672435" /db_xref="GeneID:1114068" /translation="MTKFETANELISFVKEKDLKRGFYQKGKRIQWLVGFDMLGFMQV TTPAQVRKSRSGFNCSVTNWNVLLEENFPKLDWFLSAKYIGTELEK" gene 458322..458876 /gene="pi119" /locus_tag="L58289" /db_xref="GeneID:1114069" CDS 458322..458876 /gene="pi119" /locus_tag="L58289" /note="similar to orf24 of the bacteriophage Tuc2009" /codon_start=1 /transl_table=11 /product="prophage pi1 protein 19" /protein_id="NP_266610.1" /db_xref="GI:15672436" /db_xref="GeneID:1114069" /translation="MKMTKFEEKLEILPIKTIQHPVGDTKYYAAVHVKTLIAQADEEI ANLKSQLQQQALPVVPDFIGKLINTFGAPEDGKYINYSASYLEIQKELDWIDNHQKTW LTALLIGFRVEKPQLFYLRDELTGQFLAKDNQFKNEDRYFFWTGADPLTHSIGTAWKL TFTQQEIDSMQTGSYELVPVEDGE" gene 458873..459292 /gene="pi120" /locus_tag="L58858" /db_xref="GeneID:1114070" CDS 458873..459292 /gene="pi120" /locus_tag="L58858" /note="prophage pi1 protein 16; de novo synthesis of thymidylate; similar to dUTPase of bacteriophage r1t" /codon_start=1 /transl_table=11 /product="deoxyuridine 5'-triphosphate nucleotidohydrolase" /protein_id="NP_266611.1" /db_xref="GI:15672437" /db_xref="GeneID:1114070" /translation="MTRGFKKLDENATIPERATEHSAGYDISASETVTIQPDEIKMVS TGLAVQLGDDEVLKLYDRSSNPVKRGIALINSVGIIDSDYYPQEFKGLFMNISKEPVT ISKGQRIMQGVFVKYLTTDDDNANGKRTGGFGSTGEL" gene 459292..459582 /gene="pi121" /locus_tag="L59286" /db_xref="GeneID:1114071" CDS 459292..459582 /gene="pi121" /locus_tag="L59286" /codon_start=1 /transl_table=11 /product="prophage pi1 protein 21" /protein_id="NP_266612.1" /db_xref="GI:15672438" /db_xref="GeneID:1114071" /translation="MDNKRISEIVEEEMIKQDANRYRDMRKILTIPKSIADELDSVFA GVDATDIGYVLDQTGPYGSRAFDDYYFKNKNIIALYLAGKALGVDLVKVGEG" gene 459579..459743 /gene="pi122" /locus_tag="L59567" /db_xref="GeneID:1114072" CDS 459579..459743 /gene="pi122" /locus_tag="L59567" /note="similar to orf17 of bacteriophage o1205" /codon_start=1 /transl_table=11 /product="prophage pi1 protein 22" /protein_id="NP_266613.1" /db_xref="GI:15672439" /db_xref="GeneID:1114072" /translation="MIEYAIYKGEKFIAEGTADELAKLLNVKPTTIKWWSRPVNSRRD KGNRKIAVKL" gene 459792..459935 /locus_tag="L200017" /db_xref="GeneID:1114073" CDS 459792..459935 /locus_tag="L200017" /note="similar to bacteriophage bIL309 Orf27" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_835295.1" /db_xref="GI:30023996" /db_xref="GeneID:1114073" /translation="MNNELQELLIQIIKAAMIAIPIWGLIIMAFIIFIFKNDIKKWWR NRK" gene 459932..460114 /gene="pi123" /locus_tag="L59938" /db_xref="GeneID:1114074" CDS 459932..460114 /gene="pi123" /locus_tag="L59938" /note="similar to orfx from lactococcal bacteriophage 712" /codon_start=1 /transl_table=11 /product="prophage pi1 protein 23" /protein_id="NP_266614.1" /db_xref="GI:15672440" /db_xref="GeneID:1114074" /translation="MKLMCKLSGHKWSKWRANLFSTHEERFCRRCYIRDKRLNRSDLD ESENVFPEKWLDKHMD" gene 460181..460288 /locus_tag="L200018" /db_xref="GeneID:1114075" CDS 460181..460288 /locus_tag="L200018" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_835296.1" /db_xref="GI:30023997" /db_xref="GeneID:1114075" /translation="MTTSNMISMFFKNATTSEWILTIVISLIAAYQNMD" gene 460296..460481 /gene="pi124" /locus_tag="L60272" /db_xref="GeneID:1114076" CDS 460296..460481 /gene="pi124" /locus_tag="L60272" /codon_start=1 /transl_table=11 /product="prophage pi1 protein 24" /protein_id="NP_266615.1" /db_xref="GI:15672441" /db_xref="GeneID:1114076" /translation="MKKFRLISNSFLKEDGQLHSRQQFVEANSLADVIEYIESNAGWY TDINVAFKVAYIEEVVE" gene complement(460534..460743) /gene="pi125" /locus_tag="L60543" /db_xref="GeneID:1114077" CDS complement(460534..460743) /gene="pi125" /locus_tag="L60543" /codon_start=1 /transl_table=11 /product="prophage pi1 protein 25" /protein_id="NP_266616.1" /db_xref="GI:15672442" /db_xref="GeneID:1114077" /translation="MSYVVNKTGDFSGYHEVHKGACPNRPIVTDSYLINKQFENDLDA MEYVKEIYPSLQVRPCLSCMDTSSR" gene 460956..461249 /gene="pi126" /locus_tag="L60929" /db_xref="GeneID:1114078" CDS 460956..461249 /gene="pi126" /locus_tag="L60929" /note="similar to orf4 of abiN locus from Lactococcus lactis S114 accession number Y11901" /codon_start=1 /transl_table=11 /product="prophage pi1 protein 26" /protein_id="NP_266617.1" /db_xref="GI:15672443" /db_xref="GeneID:1114078" /translation="MSQEITVDFSEQIAKAQTKIDRLKDMIHDVRDQKIVLDDIKNNH MPRDTKLELNLGGVLKCSVKINVGTLIPLLEQNIEDNTALIHELAKELGIDIK" gene 461360..461605 /gene="pi127" /locus_tag="L61369" /db_xref="GeneID:1114079" CDS 461360..461605 /gene="pi127" /locus_tag="L61369" /note="similar to Orf20 of S.thermophilus bacteriophage o1205" /codon_start=1 /transl_table=11 /product="prophage pi1 protein 27" /protein_id="NP_266618.1" /db_xref="GI:15672444" /db_xref="GeneID:1114079" /translation="MRKNRIKELRKAQKITLKGLSEKLKEKGLSFSDSQLSYYEQGKR SPRNEDIWEALAEIFDVSLAYVMGMEMGLVNIYPPTL" gene 461650..462039 /gene="pi128" /locus_tag="L61641" /db_xref="GeneID:1114080" CDS 461650..462039 /gene="pi128" /locus_tag="L61641" /note="similar to orf4 of abiN locus from Lactococcus lactis S114 accession number Y11901" /codon_start=1 /transl_table=11 /product="prophage pi1 protein 28" /protein_id="NP_266619.1" /db_xref="GI:15672445" /db_xref="GeneID:1114080" /translation="MDKVSTYERPKRTNAPMIKRAEKKEINMLSETKIRRNIETIEQK TCRLKNVIHAIKRQTELVELLEDKLQSGEIKKTDKFGAELTDRFSFFESNFNIPVGTL ISLLKDNIEGNTTIASELVAKLGIEVE" gene 462041..462439 /gene="pi129" /locus_tag="L62008" /db_xref="GeneID:1114081" CDS 462041..462439 /gene="pi129" /locus_tag="L62008" /note="similar to the 64 protein (GP64) from Mycobacteriophage l5" /codon_start=1 /transl_table=11 /product="prophage pi1 protein 29" /protein_id="NP_266620.1" /db_xref="GI:15672446" /db_xref="GeneID:1114081" /translation="MKKIKNIAISTVLGASALIGLSACSQADKVSQNVSNDADNFKVE RRVVIINTRTDKIEFVAKGLISVNTEDSKKLVILAKVGKSQYKKDIINLTNNNMYTVE DLSGANVNSYKYEVTWLPESVVPVKIVGEK" gene 462436..462588 /gene="pi130" /locus_tag="L62412" /db_xref="GeneID:1114082" CDS 462436..462588 /gene="pi130" /locus_tag="L62412" /codon_start=1 /transl_table=11 /product="prophage pi1 protein 30" /protein_id="NP_266621.1" /db_xref="GI:15672447" /db_xref="GeneID:1114082" /translation="MMGISIANFLITLLTYLSIWSVIVVIFIGLMSLIAYWAYLVYKF LRKIGK" gene 462765..463187 /gene="pi131" /locus_tag="L62774" /db_xref="GeneID:1114083" CDS 462765..463187 /gene="pi131" /locus_tag="L62774" /note="similar to orf6 of abiN locus from Lactococcus lactis S114 accession number Y11901" /codon_start=1 /transl_table=11 /product="prophage pi1 protein 31" /protein_id="NP_266622.1" /db_xref="GI:15672448" /db_xref="GeneID:1114083" /translation="MADKLDRIIGDYVNGRLEARIKSIESRYLYKQKVDNLGIRTAYS GGSEPESHVLNKEALENDEEYIKLKDLMYQFSLWYEPLIKEEKEIIKLKHCGYGGFTW YRVMMELDNEGIEISEKKAKFIYYRFRKDINPHIGYFI" gene 463425..463928 /gene="pi132" /locus_tag="L63293" /db_xref="GeneID:1114084" CDS 463425..463928 /gene="pi132" /locus_tag="L63293" /codon_start=1 /transl_table=11 /product="prophage pi1 protein 32" /protein_id="NP_266623.2" /db_xref="GI:30023998" /db_xref="GeneID:1114084" /translation="MRLHRCANVGCRELIPLKHNYCQKHYDERLGNYINQRAESKAKA SLTLRGQRNQAEQNREYDQTRRKELHNGFYQDKRWSKVSEYVKARDGYVDAIEGKVWD KGDLIADHIIPRRLLSGMEQYNTDNLWLLTKSQHNKKTAIENKLSDQQLKNVGRDWWK KVLKNKK" gene 464045..464497 /gene="pi133" /locus_tag="L64021" /db_xref="GeneID:1114085" CDS 464045..464497 /gene="pi133" /locus_tag="L64021" /note="prophage pi1 protein 33; similar to small subunit (orf152 gp) of terminase from Streptococcus thermophilus bacteriophage Sfi21" /codon_start=1 /transl_table=11 /product="terminase small subunit" /protein_id="NP_266624.1" /db_xref="GI:15672450" /db_xref="GeneID:1114085" /translation="MAKKSFKDINDGRLIYQPPDHLGRTAKQIWRRVVLFLETQKPVE RIDQTLVEMYCTQYEIYRNSYEHLKKHGEVQEIYKPVQDMTGEIIDRQFQGFKRNPMT QIYSDAIKNLTKIGSELGLSPKSRSELMGLNMQEDEEEIDWTSKFGGG" gene 464497..466311 /gene="pi134" /locus_tag="L64491" /db_xref="GeneID:1114086" CDS 464497..466311 /gene="pi134" /locus_tag="L64491" /note="prophage pi1 protein 34; similar to large subunit (orf623 gp) of terminase from Streptococcus thermophilus bacteriophage Sfi21" /codon_start=1 /transl_table=11 /product="terminase large subunit" /protein_id="NP_266625.1" /db_xref="GI:15672451" /db_xref="GeneID:1114086" /translation="MDNYKDLTERYPDDPALSYAIGVLDGTIISGEKIKQACKRHIDD LRRIDKDDAFIYIYDSEQAKKIVEFSTLLKDVTSGEPFEASPYQKFILASVQGWRNPE TKGMRFKTIFISMARTNGKTQVLATYALYNFLFGSPKINRQLAVSSIDIAHTHNLFNY MRFNWIQLKDGVFKKLAKALDINDNSQVMEIKKQSAVMKKLSAQGSPADSDHYTTGIV DEYHLFGQKQRDFISSMTSGMVNNPLAQMFFISTAGVDPTVPMFEDYKRYSKMLESGD WSSSEKDLVLIWDQDSEDEAYLIETWPKSNPLMEIESMRKNLTEGMITERDSLNSQGR IRDFYVKNMNLWQNAKKNAYLPLDLVQDAIVDEFDYFGRDVFIGFDYSQTNDDTSLAF VFPHSGSKFHLYQHSWIPIAKAGSIEAKEQRDNIDYRAVQEKGFATITRDRFGLIDED EVFNWMLNFIEKNELRVKAILYDQWGTGNFIRRLDEVKEEYLLIPVRQGIKSLNEPTK FLQSSFIKHNITMLDDQALIQGLVNAVTVSDNNGIKLDKNVNSQKIDAADAIVNALYE GQFYFNDFTNVEEKKTNSPFGNMNDEEISDYFINGFSF" gene 466320..466484 /locus_tag="L200019" /db_xref="GeneID:1114087" CDS 466320..466484 /locus_tag="L200019" /note="similar to bacteriophage bIL309 Orf40" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_835297.1" /db_xref="GI:30023999" /db_xref="GeneID:1114087" /translation="MKNLITYLPALLVFVGFLFVSVGVFIINVPLGLIVSGVLLFALA YMYSNKGGHT" gene 466481..467560 /gene="pi135" /locus_tag="L66478" /db_xref="GeneID:1114088" CDS 466481..467560 /gene="pi135" /locus_tag="L66478" /note="similar to a hypothetical protein of Lactobacillus bacteriophage phi adh accession number AJ131519" /codon_start=1 /transl_table=11 /product="prophage pi1 protein 35" /protein_id="NP_266626.1" /db_xref="GI:15672452" /db_xref="GeneID:1114088" /translation="MSILNPFERRSSITPNNYYPFMVQNGSIVPNSLVDATEALKNSD LYAVTSLISSDIAGTRFIGNQVFTSVLNNPSHLTNAFSFWQTAILNLLLNGNVFLAIL KGDNSLMKELRLIPSNAITIDLTDDTLTYEVNQFDDYPSAKYNASEMIHVKIMAYGVD TLHNLVGHSPLESLTSEIGQQKEANRLSLSTLKGALNPTSVVKVPQGTLSSEAKDSIR KEFEKANGGNNSGRVMVLDQSADFSTVSINADVANYLNSMNWGRTQIAKAFGVSDSYL NGTGDQQSSLDQIKDLYVNALNRFIEPLISELRIKCDSSIGVDMSPITDYSNSVFKAD ILNWVKEGIIEPTEAKTLLESKGII" gene 467560..468147 /gene="pi136" /locus_tag="L67524" /db_xref="GeneID:1114089" CDS 467560..468147 /gene="pi136" /locus_tag="L67524" /note="prophage pi1 protein 36; similar to orf26 of Bacillus subtilis bacteriophage phi-105" /codon_start=1 /transl_table=11 /product="prohead protease" /protein_id="NP_266627.1" /db_xref="GI:15672453" /db_xref="GeneID:1114089" /translation="MENIEYRYFDSTELETRSPTNTGFIGQIAGYAIKFNTPSTAMAP FIEYIAPIALDNVDLSDVLALYNHDYANVLGRVDAGTLKLSIDKVGLHFVLDMPDTTV GHDVYNNIKAGNLKGMSFGFSVADGGDSWQQGADSPIRIINQLQTLSEISVVSRPAYD DTSVQVTRSMDAFLSERTRKYKEKVKIYLGGLNEN" gene 468137..469450 /gene="pi137" /locus_tag="L68137" /db_xref="GeneID:1114090" CDS 468137..469450 /gene="pi137" /locus_tag="L68137" /note="prophage pi1 protein 37; similar to orf27 of Bacillus subtilis bacteriophage phi-105, encoding capsid protein" /codon_start=1 /transl_table=11 /product="capsid protein" /protein_id="NP_266628.1" /db_xref="GI:15672454" /db_xref="GeneID:1114090" /translation="MKIEKLKKDLATKTAELNTKKAEIRSFTESEDKTIDEVKAGMTE IKEKEDEIKEIRSNIEVLEQASALKVEEKRDDSDLVAPELEENSADNEEDDPEKLKTE TKSEAEKDKKTVKDEEKRDAGGLQDMKLKVGGEIADKKVTAFADYLKTGEVRDVTGIA LKDGKVIIPETILTPEKEVHQFPRLGSLVRTESVTTTTGKLPIFNNSTDLLTAHTEYG QTTKNATPVITPILWDLKTYTGGYVFSQELISDSSYDWQAELQSRLIELRDNTDDSLI ITALTDGIKKTTSTYLLGDLKKVLNVTLKPQDSAAASIVMSQSAYNLFDMATDAMGRP LLQPNVTAATGYTLLGKTVVIVDDKLFPSASAGDVNIVVAPLKKAVINFKLTEITGQF QDTYDIWYKQLGIFLRQNVVQASKDLIVNLTGKLKAVTVVQSTAV" gene 469461..469766 /gene="pi138" /locus_tag="L69467" /db_xref="GeneID:1114091" CDS 469461..469766 /gene="pi138" /locus_tag="L69467" /codon_start=1 /transl_table=11 /product="prophage pi1 protein 38" /protein_id="NP_266629.1" /db_xref="GI:15672455" /db_xref="GeneID:1114091" /translation="MALITAQELLDENHIDSNYDEIATMNRLIHDASALIRGSISDSV TDEQIMDNLPDQYNRAVSALATRLYFSRDLSEGYGIGIQIMINQIRARMWEVLNGTT" gene 469753..470088 /gene="pi139" /locus_tag="L69762" /db_xref="GeneID:1114092" CDS 469753..470088 /gene="pi139" /locus_tag="L69762" /note="similar to putative head-tail joining protein (orf10) of Streptococcus thermophilus bacteriophage DT1" /codon_start=1 /transl_table=11 /product="prophage pi1 protein 39" /protein_id="NP_266630.1" /db_xref="GI:15672456" /db_xref="GeneID:1114092" /translation="MAQLNLADFNKKVQLGDVKTLTNEYTGAGYDSFVPKINVWFASK TRTLSQSYQLQGTALENSRTIIIRHNSSAEKLKAAVIDNVQYDIVNYSPDETSNIIRY DYLTLKRSS" gene 470085..470570 /gene="pi140" /locus_tag="L70070" /db_xref="GeneID:1114093" CDS 470085..470570 /gene="pi140" /locus_tag="L70070" /note="tail component; similar to putative tail component protein (Orf11) of Streptococcus thermophilus bacteriophage DT1" /codon_start=1 /transl_table=11 /product="prophage pi1 protein 40" /protein_id="NP_266631.1" /db_xref="GI:15672457" /db_xref="GeneID:1114093" /translation="MMEEKQLFEDIMNGIIFQAESVSTSLTVEDKAKITKAGANAFAI GLEKVTKDKHYRIRKTGENPHLADSILVQNTNIDGIKDGNSTVGWDYTKSRVGHLIEN GTRFPMYSKKGTKYRKGGQVAITSDPFVSTYRDSMEAQVAMFSAEAEVFSEILKKKGA E" gene 470567..470962 /gene="pi141" /locus_tag="L70498" /db_xref="GeneID:1114094" CDS 470567..470962 /gene="pi141" /locus_tag="L70498" /note="tail component; similar to a putative tail component protein (Orf12) of Streptococcus thermophilus bacteriophage DT1" /codon_start=1 /transl_table=11 /product="prophage pi1 protein 41" /protein_id="NP_266632.1" /db_xref="GI:15672458" /db_xref="GeneID:1114094" /translation="MRPTQEVSQIVGAFRPSWLVFENFIPKEHVNDLDNTQVLLTEFK SDITNYGDGTFNSVVLAVTIQIFYGFNLSESMLLAEIELMEKLKDSGWLTISSEPHYL DVSTNTTKQQTKKNITVEKIVEINELKGE" gene 470964..471569 /gene="pi142" /locus_tag="L70961" /db_xref="GeneID:1114095" CDS 470964..471569 /gene="pi142" /locus_tag="L70961" /note="prophage pi1 protein 42; similar to small major structural protein of Streptococcus thermophilus phage phi7201 accession number AF001793)" /codon_start=1 /transl_table=11 /product="small major structural protein" /protein_id="NP_266633.1" /db_xref="GI:15672459" /db_xref="GeneID:1114095" /translation="MTIVGLKKTYLGLIDKKTGKIIAGPEGLTTDGLYMSNPKDLGTA SANITNIAAAGTQKFGDNGLVDVVSSKSFPQVAAVWNNLPFDIKAKIKGEVSDKKGGY VQSQDLPQVALIIESELIDRSHSIFYAFGNGHMTETALNIQTDNAAQNRVEDALTYQS LAFEAWNNQGMKTFNSADSGFDKTAMLKEVMGGYAASGLGV" gene 471629..471973 /gene="pi143" /locus_tag="L71563" /db_xref="GeneID:1114096" CDS 471629..471973 /gene="pi143" /locus_tag="L71563" /codon_start=1 /transl_table=11 /product="prophage pi1 protein 43" /protein_id="NP_266634.1" /db_xref="GI:15672460" /db_xref="GeneID:1114096" /translation="MEIKIKKLKKTVEVKASIKNLKKSYKFAKNMAEAEEKISEGNDE LVLDYLDSIIEFVSDIAKLSKKEKEELEELEMEELMEVVSYIVAKLQGASDSDIKKAK ENGEVGLAQESE" gene 472143..475982 /gene="pi144" /locus_tag="L72137" /db_xref="GeneID:1114097" CDS 472143..475982 /gene="pi144" /locus_tag="L72137" /note="tail component; similar to putative tail component protein (Orf15) of Streptococcus thermophilus bacteriophage DT1" /codon_start=1 /transl_table=11 /product="prophage pi1 protein 44" /protein_id="NP_266635.1" /db_xref="GI:15672461" /db_xref="GeneID:1114097" /translation="MEFVNLKRKEEYMAKEKVAGTLATNIGVNTTNAVTSIESLKNSV KDSTNAWKQMESQMKLSGDTLGASKAKYEGLSDSLSKQKSVLERLKQEQSEVNRSTSA GEKAYQKYASQITQAEVKLTALNGQQDKAKQAYEYQKSGLAKLNEEVQHSNKLTEERV KQLEAEGKTEEANKAKIDGLKSAQEKYSQILKIQKTELEKLGESGDKNSKAYRLQEVR VAQMSTKVSEATRDIKRLNGTEIKPRTEGIGKVKSQLRSLNGLLDRTHSHFKDVFLGN ILATGVIGAIGDIKSKFTGALEAGVEYNKEMQNLSVSLNNFTNGNQKLNDSLVDNIKN LREESGYSIDTLSLLTKKTYGLTGSADGAKKLSDAFVNLGRATGKSDDAMQNIITKFT QMNASGEITSGSITKMEKTLPGFAKTLATTMGVSRDKLNELANNGKISMSDLSKTIEN MSAAKPKGLENYLTSFDGFSGHLKEKYQSLSGKITEGFFKTNNNFLKNISKSLDGEET EKAFTHIGDSANKAVTTISTAFSSVFKGTKNPLADFANGLANEIEKLGNFISKHANDI KNFFGMVKELGSAAFKLIGDTLKTVIPWLEKFGTWASKHPKDVKKIALAIIGLNVALK GTLGVLKGVEKYEALKKLFVIKDAEKGTKALTGLGKAAVGAGKGMKLAFNFLKTNPFI LIITGIVAVVAAFVELYKHNKKFRKFINGIAKAVSKWAGSVVKWFKKTWDGVSKGFNN FGKSFSKVFNSLLNGIKNAWNGAWSWIGNVFNKYIDIFKSVLKLFTDFFTGKWGNLGK DIQKIWNALWGFVESIFGKKVDSIKKGIEGFGTKIWDTFNTIKTKVSDFWKGMWDGLI QFGKDGINSVIGVINNGIGGINGVIHTFGGSKNAISKIPKLANGTKGAPKGVALINDA PGEHYQEAVIDNSGQMHVLEGRNRLVNFQGGETVVPAHAIPHFENGTPDWLSSIGSWV KDKWDGLTEMIKHPIKTLTHFMTNAISGISGSPLVTSIAPALGNGFVNAIVDPIKKLL GSLKKKHEDDGGGSQGSPSGSGVQRWAGQVKQALAANGLSTSQDMIDRVLRQIASESS GNEKAVQGNIGDINNITGDLAKGLMQTISSTFNANKFPGHGDIFNGYDNLLAALNYAK KKYGPSLSFLGNGHGYENGGIINAHGFYEIGEGNKPEMVIPLSVEKNARANQLLAEAN QRINGNNRASSNTADLSPVLTLLSNIFNSIEDVKKNPLIAYALLDGRNVSQGLAPYMN QALTDYVNQQDRLWGKN" gene 475985..477520 /gene="pi145" /locus_tag="L75985" /db_xref="GeneID:1114098" CDS 475985..477520 /gene="pi145" /locus_tag="L75985" /note="tail component; similar to putative tail component protein (Orf17) of Streptococcus thermophilus bacteriophage DT1" /codon_start=1 /transl_table=11 /product="prophage pi1 protein 45" /protein_id="NP_266636.1" /db_xref="GI:15672462" /db_xref="GeneID:1114098" /translation="MAFSVKFNDVDLSTIVDGFTAITRNIGAGWTNTVQPNPIIGADF TQNSINSKSITVNFIANVKLDRFTSVRKALASALNVKQPAALIFDDDPNQVWWAVPDG TPTLDESSFYQAVGSITFLVPSGVSESVETNVLNASNSGGQLGTITNNSDSSVDVEIN NTGNLDAFPTIEITNVHENGYIAIAGQNGAIEIGNRQEADGVVKPESEYLYNSNSDLS FSKFIDATGTANPQNSGLGTNGTISFQSDGLRFATQGTMSGSQFAGGGMKVMTLPADS NGHVGAVNFYSHFNLFAWAGAMGQTGILQILFTDINDKLVAGYGITKSDMSGNSAKCS FWVGGNTPKEYTSFGFETNNAEKNQKYPNNMFNSSTGDADFLKEGASLGFYWYGSRKT IYVPELADVEVSKVYLYLGQFKGSNKFINNLSIRQVNLTKNNVSVWKDVPNRYAANSK ITVNMNGKDTVVINGMPAIQEKIRGTEPFSIPPGRSTLKILQSTWNTTPPIVQISYKE RNL" gene 477520..481845 /gene="pi146" /locus_tag="L77514" /db_xref="GeneID:1114099" CDS 477520..481845 /gene="pi146" /locus_tag="L77514" /note="tail component; similar to putative tail-host specificity protein (Orf18) of Streptococcus thermophilus bacteriophage DT1" /codon_start=1 /transl_table=11 /product="prophage pi1 protein 46" /protein_id="NP_266637.1" /db_xref="GI:15672463" /db_xref="GeneID:1114099" /translation="MEIVVHDNTLKTVAIINNDIPMLPSFFNDNWHRYKDQGAETFIF TVNKFINGQLQDYCRFLNEQAYISFTYDGIDHLFGVENVQESDYQITLTCSSLNLELR NEQANALVNTSSHNIQWYFDQMELISNAQITIGTNEVSSLTRTINYDGQESKLARLIS VIGNFNAEFEFITHLNDDGTLDSIILNIYRANDGVNIQGVGTNRNDVSLNFGKNISGI TRTGDTTNLFNATKITGSDDLNWNSSEFSYVNSDGVEEFYKRKNDDTAFAPLSLNLFK SQIKSNNGDKWIRKDFQTEYTNVNDMWGYCVSQFKQFAYPTVTYEVLANSSLVLESVG NDRPLSIGDTINIQDDNFMDSDGNVGLLLSARVSEMEISFSNPTLNKITFSNFKKQQS EASADIQAIVNQLVDAATPYIGSIDTTNGTQFKNGTGSTTLSAHIFKGSATTETIADS YEWSKDGTVIAPTQTITVDASGVSDKAVYSFKATVAGKVVANQSVTITNVDDGTNGRS VTNVSQKWRLTTTTATPTQTWSDAGWLTTQPTTTATNKYLWSITRTTFNLAPLTQDVI EQKAVYGDKGDKGDTGNDGRAGKDGVGLRSTTVTYTISSSGTVTPTTGWTSQVPTLVK EQYLWTKTLWTYTDNTSETGYSVSYIAKDGNNGHDGFPGKDGVGISNTIIEYVGAVSG TSKPTGGWSTTIPTVPAGQYLWTRTTWQYTDGTSEQGYINALMGLTGASGRDGIAGKD GKGIKATAITYQASTNGTTAPTGTWSTSVPSVAKGSFLWTRTIWTYTDNTTETGYAVA YMGTNGNNGTNGIAGKDGTGIKTTTITYAVGTSGTTAPTGGWNSQVPNVPAGQYLWTK TVWDYTDKTSETGYSVSKFGEKGDKGDQGVQGIQGVDGRQGIPGPKGADGKTQYTHIA YANSADGKTNFSTSDSNRTYIGMYVDFNINDSTTPSDYSWTLVKGADGTQGTPGKPGT DGKTPYFHTAWSYSADGTDGFTTVYPNLNLLDGTSKSAKTATIYKDDVAGIIYWDTKQ LSEKTITGSVYLDLTNSPYDVWFQLYTTNGVLYGNTIKAGQKGYSRFSGKVSTITDNN ANIAFRTPTKVTDTITFDYSEMKIEEGSTATPYMPSSSKITTADYPSYIGQYTDFKQS DSTNPSDYTWSLIRGNDGDPGKVVSDTEPTTRFKGLTWKYSGTADLTASDGTVIKPNT EYYYNGTHWMINYLSANNIEANSIKADKIDAKNLTITDGEFVSTTTNGPVTTSTEIKD NHIAISKTDGTVNTKNDLAVDTEQGFAMKFTNNTTGLTREASVNFQGVSTSDSNGNYA QLTPQGTKLSTDVPWTDITRASGVGTSGTLRARINNGVFYAQSKDVTIPSIAPNSLIT IGTMSSKFSGVSGFDTLGLLYSPGQLSVASVTVGNDGKINIGNPNPTTMSGKVIQFSI NIPLG" gene 481865..482191 /gene="pi147" /locus_tag="L81862" /db_xref="GeneID:1114100" CDS 481865..482191 /gene="pi147" /locus_tag="L81862" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266638.1" /db_xref="GI:15672464" /db_xref="GeneID:1114100" /translation="MESVIQHALVVVKDVIDNWGAITVVSIIIGSGYRILNKKQELRD KAQEDQLLIMRQEIKRIELSQAINHDYGLQIVSSIFDEYTSLGGNHYAHEIYEKYKKE KEHENN" gene 482178..482465 /gene="pi148" /locus_tag="L82103" /db_xref="GeneID:1114101" CDS 482178..482465 /gene="pi148" /locus_tag="L82103" /note="similar to holin of Staphylococcus aureus bacteriophage phi PVL, similar to orf95 of Lactococcus lactis phage BK5-T" /codon_start=1 /transl_table=11 /product="prophage pi1 protein 48" /protein_id="NP_266639.1" /db_xref="GI:15672465" /db_xref="GeneID:1114101" /translation="MKTIDKGTLTRTVLLWLAIINQILTALGINPLPLDDNTVSTVIT TVFALWAWWKNNDFTHAAKKGTELTKSLKNGDSVQVVKASDADHEFTEGGE" gene 482465..483244 /gene="pi149" /locus_tag="L82453" /db_xref="GeneID:1114102" CDS 482465..483244 /gene="pi149" /locus_tag="L82453" /note="prophage pi1 protein 49; similar to orf259 of Lactococcus lactis phage BK5-T" /codon_start=1 /transl_table=11 /product="muramidase" /protein_id="NP_266640.1" /db_xref="GI:15672466" /db_xref="GeneID:1114102" /translation="MSSIENMIAWMQARKGKVTYSMTSRMGPKSYDCSSSVFFAMIAG GFLSEGSMGNTETLFGMSGTKLKEISRGEVQRGDIFISGTPGGSAGSDGHTGIFLSNG SFIHCSYTHNGIAVDTNDAYMSTRLPHHFYRIVGSGSGKTDSKPQMITLNVDGQFGNA TAKRLQEYFDTAGKDGVISHQYKQTFNQNIYAAQFDSSLTGSNVVKALQRFLGIGQDG LFGQGTIKALQKHLGTTQDGTISPVSDSVRELQRRLNANKL" gene complement(483349..483552) /gene="yeiD" /locus_tag="L83361" /db_xref="GeneID:1114103" CDS complement(483349..483552) /gene="yeiD" /locus_tag="L83361" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266641.1" /db_xref="GI:15672467" /db_xref="GeneID:1114103" /translation="MNLLKKYFLEYKNYITFYFRCQEKSALALEKSALSLPKYLVICT CIWNSIYDKDIILIYLKKNSNIC" gene 484226..484987 /gene="truA" /locus_tag="L0331" /gene_synonym="hisT" /db_xref="GeneID:1114104" CDS 484226..484987 /gene="truA" /locus_tag="L0331" /gene_synonym="hisT" /EC_number="5.4.99.12" /note="mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability" /codon_start=1 /transl_table=11 /product="tRNA pseudouridine synthase A" /protein_id="NP_266642.1" /db_xref="GI:15672468" /db_xref="GeneID:1114104" /translation="MTRYKATIAYDGTDFAGFQSQTNQRTVQKEIEKILTKLNSFEPV ILQGSGRTDSGVHAFGQVIHFDLKGKVRDLERLRFGLDTQTPADIAVKKVELVPDDWH ARYQKHEKTYEYYLENSITRSPFQRHSKAYFRYPLNFERMQEAMSKLVGEHDFTGFTA SGSSVDDKVRTIYQAEIIRLDEENFKFIFRGNGFLYKQVRNMVGTVIKIGNDRMPVSQ IDKILTSKNRDFAGPTAAPEGLYLKEVKYAENTDI" gene 485020..485808 /gene="thiD2" /locus_tag="L0202" /db_xref="GeneID:1114105" CDS 485020..485808 /gene="thiD2" /locus_tag="L0202" /EC_number="2.7.4.7" /note="catalyzes the formation of 4-amino-2-methyl-5-diphosphomethylpyrimidine" /codon_start=1 /transl_table=11 /product="phosphomethylpyrimidine kinase" /protein_id="NP_266643.1" /db_xref="GI:15672469" /db_xref="GeneID:1114105" /translation="MPKNLNESKKILTIAGSDILSGGGMQADLATFAANGLYGFCALT SIVTVKEDKFFVHPVEKELFQEELESLSDVDFSAIKIGLLPNKEILELTKNWLTDLSV KSDTPIILDPVIVFKENADYSVNEMRDLFISQLFPLATVITPNLKEAEILTGLSVKSK SEMKEAAKLLHDFGAKNVVIKGGNRFDQKQAIDLAYDGKAFYELSSPIIENNNNGAGC TFASSIAANMAYNHPFKDSVKNAKDFVYQAIQNANEYGVFQNKK" gene 485857..486348 /gene="yeiE" /locus_tag="L85854" /db_xref="GeneID:1114106" CDS 485857..486348 /gene="yeiE" /locus_tag="L85854" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266644.1" /db_xref="GI:15672470" /db_xref="GeneID:1114106" /translation="MDNRNIKKLTLLAIWTAVTFVLGRLFTFPIPGSAGNILTLLDVG IYTAVFLFGKREAAIIGGFAAFLLDLTAGYSNYMFFSLIIHGGQGYLAGLTRYKWLNF LLSLVFMVGGYFIVGGLMYGWGSAIAGLWVNIIQVVVGFALAKVLSPLIERTGILNGF RKA" gene 486329..486871 /gene="yeiF" /locus_tag="L86338" /db_xref="GeneID:1114107" CDS 486329..486871 /gene="yeiF" /locus_tag="L86338" /note="similar to YwlG protein from Bacillus subtilis" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266645.1" /db_xref="GI:15672471" /db_xref="GeneID:1114107" /translation="MDLEKLKKDTQVIIDDVIKQTEIKAGQVFVLGLSSSEVNGGLIG HASSSEIGQVIVSVIHKTLSDKGIYLAVQACEHLNRALLIEEELAEKKDWEIVSVIPQ LHAGGSGQVAAYQLFKSPVEVEHIVANAGLDIGDTSIGMHVKHVQIPVRPILRELGGA HVTALKSRPKLIGGERARYK" gene 486872..488008 /gene="yeiG" /locus_tag="L86881" /db_xref="GeneID:1114108" CDS 486872..488008 /gene="yeiG" /locus_tag="L86881" /note="energy metabolism; similar to several amino acid aminotransferases" /codon_start=1 /transl_table=11 /product="YeiG" /protein_id="NP_266646.1" /db_xref="GI:15672472" /db_xref="GeneID:1114108" /translation="MKEMLIMTPGPTEVAENVRLARAKATTNPDIDLAFYDFYKKTCS KLAQFLKTKNDVRVLAGEGILGLEAACASLTEKGDRVLVLDNGIFGHGFSDFIELYGG EAILLESSGKEAFSLEILEKFLEKDHDFKYATVVHCDTPSGVLNDLSSICPLLKKYGI LTVVDSVAAMGGEELQVDKWQIDIALGGSQKVISAPPGLTIASISTEAYQAMTERKSP IASFYCNLLTFKDYYEKKWFPYTMPISDIYGLDQAIDNLLADQEILKRHAMIGHATRQ AIENSPLELYLQNGYSNTVSVIKVPEGLNDQEILRKMRENYRVMITGSFDHLAGKVLR IGHMGENARPNKVAYSLYALQKVLEDFGIAFKNNLQEDFLEALN" gene 488243..489850 /gene="pyrG" /locus_tag="L88252" /db_xref="GeneID:1114109" CDS 488243..489850 /gene="pyrG" /locus_tag="L88252" /EC_number="6.3.4.2" /note="CTP synthase; CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer" /codon_start=1 /transl_table=11 /product="CTP synthetase" /protein_id="NP_266647.1" /db_xref="GI:15672473" /db_xref="GeneID:1114109" /translation="MSTKYIFVTGGGTSSMGKGIVAASLGRLLKNRGLKVTVQKFDPY LNIDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFIDINLNKYSNVTSGKVYSEILRK ERKGEYLGATVQMVPHVTNMLKEKIKRAATTTDADIIITEVGGTVGDMESLPFIEALR QMKAEVGADNVMYIHTVPILHLRAAGELKTKIAQNATKTLREYGIQANMLVLRSEVPI TTEMRDKIAMFCDVAPEAVIQSLDVEHLYQIPLNLQAQNMDQIVCDHLKLDAPKADMT EWSAMVDHVMNLKKKVKIALVGKYVELPDAYISVTEALKHAGYSSDAEVDINWVNAND VTDENVAELVGDAAGIIVPGGFGHRGTEGKIAAIKYARENDVPMLGICLGMQLTAVEF ARNVLGLEGAHSFELDPETKYPVIDIMRDQVDVEDMGGTLRLGLYPAKLKNGSRAKAA YNDAEVVQRRHRHRYEFNNKFREDFEKAGFVFSGVSPDNRLVEIVELSDKKFFVACQY HPELQSRPNRPEELYTEFIRVAVENSK" gene 489989..490902 /locus_tag="L200020" /note="similar to L-2-hydroxyisocaproate dehydrogenase; may contain a frameshift mutation" /db_xref="GeneID:1114110" gene complement(490934..491806) /gene="yejC" /locus_tag="L90946" /db_xref="GeneID:1114111" CDS complement(490934..491806) /gene="yejC" /locus_tag="L90946" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266648.1" /db_xref="GI:15672474" /db_xref="GeneID:1114111" /translation="MAPTPINKNKVVCLVNGRVHRRSGGDFLENLDPSLQTVIMRDYP EATSHDFICNEHQVKFRLEVLDTLFHLDLQKNFTVNDLLNEELTKANFEIHDVEEQLQ TQETIGERVADKVTEFVGSWAFILTYLGILVVWMFVNVSGIFGVEWDKYPFILLNLFL SITAAMQAPLIMMSQNRAAHHDRLSAKNDFQVNVKSEKGVAALHEKLDHLMMDDQASN MQIQKIQTEMLGDIQILLNEVYQQNQDIRERLDDVEDQLDDFEETFDSFEETLDSIEE NTDDEEEEGMANAD" gene complement(492452..492931) /gene="yejD" /locus_tag="L92464" /db_xref="GeneID:1114112" CDS complement(492452..492931) /gene="yejD" /locus_tag="L92464" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266649.1" /db_xref="GI:15672475" /db_xref="GeneID:1114112" /translation="MNKLFNQAVNVYLAAPFFSESQIKKVELLENALSKNKTVANFFS PMRCQHPESLPQEVEAFTPEWAKATMENDVNEVNKADIIVAIVDFDHQDTDSGTAWEL GYAIALEKPTYLIRFEDTIPANIMLTERNRAFFTQIEQVEEYDFLESKLIPYSGKYQ" gene complement(492915..493337) /gene="yejE" /locus_tag="L92927" /db_xref="GeneID:1114113" CDS complement(492915..493337) /gene="yejE" /locus_tag="L92927" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266650.1" /db_xref="GI:15672476" /db_xref="GeneID:1114113" /translation="MGMVSDAVIRHQGKVIAVYPDGILPLEPPRQNASQLYLTSGMDE RKRKLIDLGEAFVILAGGFGTMEESFQLLTEMSINQTAVRPVIFVGRKFYQPLFDLLR LQLKEGMISKEVIDAISLVDTAEETIELLGDLKLEQVV" gene complement(493469..494122) /gene="dukA" /locus_tag="L93481" /db_xref="GeneID:1114114" CDS complement(493469..494122) /gene="dukA" /locus_tag="L93481" /EC_number="2.7.1.113" /note="nucleotide and nucleoside interconversions; heterodimer of a deoxyadenosine and a deoxyguanosine kinase" /codon_start=1 /transl_table=11 /product="deoxynucleoside kinase" /protein_id="NP_266651.1" /db_xref="GI:15672477" /db_xref="GeneID:1114114" /translation="MTVLVLAGTIGAGKSSLTEMLAEELKTQAFYESVDDNKVLPLFY ENPQKYAFLLQIYFLNKRFDSIKRALSDNNNVLDRSIYEDSLLFHLNADLGRADETEV EVYDDLLNNMLEEIDSLSFKKRPDLLIHVKVSFDKMLERIKKRGRQFEQLEYDPSLYD YYKELNSRYDTWFEDFDICPKIQIGGDKYDFVEDEQSKIHVLQQIKEKLKEIEGENN" gene 494602..497784 /gene="dnaE" /locus_tag="L0307" /db_xref="GeneID:1114115" CDS 494602..497784 /gene="dnaE" /locus_tag="L0307" /EC_number="2.7.7.7" /note="Catalyzes DNA-template-directed extension of the 3'-end of a DNA strand by one nucleotide at a time. Proposed to be responsible for the synthesis of the lagging strand. In the low GC gram positive bacteria this enzyme is less processive and more error prone than its counterpart in other bacteria." /codon_start=1 /transl_table=11 /product="DNA polymerase III DnaE" /protein_id="NP_266652.1" /db_xref="GI:15672478" /db_xref="GeneID:1114115" /translation="MFAPLNTKTEYSFLDSVVKVDDYLETAHRLGYQTVGICDVGNLH AAFRFVRKAQKFNLQPIISIELNFEWRGLPIAFSFIAKDTEGYKNLLRISTLHNYGRR QFSDIQNHLSGIALIIPETYGSLSELTELSSVADEAFIGIDQLTDKGAKFNLPTLPFP AIRYLNFADNEILAILHAVRDGVSFDESLTISSNELLQRPEAYETYFLKYFPQALKNL SALTAKIAYQFDEKLELPRFDKKRQAVEHLREEATLGLSARLEEKNLLTEVSSVNLQD LSVYQERLEKELSVIHQMGFDDYFLIVADLLRYAREQDIYCGMGRGSAAGSLVAYVLG ITQVDPVQHNLFFERFLNPERVAMPDIDIDMPDDRRAELLAYMKNRYGSDHVAQIVTF STLGKRQALRDVGKAFGMTEAELSNLTRMLVRRFGTLADEYENNQRFKAEVLKNGKLK RIYEVARRIEGMPRQTSTHASGVVLSEESLVNYVSLKPSEDLALTQYEAPDVEAIGLL KIDFLGLRNLTIISRLRDLVKRRQKIDIDPLKINLEDEDTLALFRAGNTMGIFQFENP QMRRFLRNLAPSKFDDIVDATSIFRPGPSQFIPQFVARRHGKEIVPTVDDSISEILKP TYGIMIYQEQIMQVAQAFAGFSLGKADLLRRAISKKKGSELEKLREDFLDSASHNGHS KEKAEEIYDLIERFANYGFNRSHGFAYGALAFQIAYFKAHFPDEFYEIQLRDRKREVM ILDALENGFEIEKPSINLMKIGDFVKNKKIRLGLAHVQGISRDLAKWIVENQPYKDLA DFVEKLPNNFHKKENILPLIQIGAFDYADSNRGKLAYNLADHANLLNYYSDDIFMASS GGGFAYHEAEDYSETEKYDFEKNLLGIGVTPHPLQNLARRFEGNFTPLAQLVKNRRMT ILVEINYIRTHRTKTGQTMAFLTVSDSRENFDVTLFPEIYRQFSGELEQGKFYLISGK VTERNDELQLVTDRISPALETDRKLWLNLRDDKYNQKISQILREFPGSHQVILHYSNL KKTIQTKIYVEESEILQKRLEGYVIAGIYK" gene complement(497815..498468) /gene="hly" /locus_tag="L97827" /db_xref="GeneID:1114116" CDS complement(497815..498468) /gene="hly" /locus_tag="L97827" /note="cell killing" /codon_start=1 /transl_table=11 /product="hemolysin like protein" /protein_id="NP_266653.1" /db_xref="GI:15672479" /db_xref="GeneID:1114116" /translation="MEETQGSKTYQILNEIFNAVTHGAGTGLAIAALVLLVIKGAASG SALEVVAFTIYGASLVILFLCSTLAHGLHFTKAVKVFRVFDHNGIFFLIAGTYTPYCL VALNNWLGWIVLAVIWICSILGIVLTSIYLPKWGKTPKLSTVLYVVLGWMILIVIYPL WNALDPVGFWLLVAGGVVYSVGALIYHFKFPFAHVVWHLFVLLAAMLMFFSVYLYVG" gene 498649..499506 /gene="yejH" /locus_tag="L98583" /db_xref="GeneID:1114117" CDS 498649..499506 /gene="yejH" /locus_tag="L98583" /note="similar to DegV of Bacillus subtilis" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266654.1" /db_xref="GI:15672480" /db_xref="GeneID:1114117" /translation="MGVQIVNMPIKIVTDSSITIEPGIARELDITIVPLSVTIDGTMY SDDDLKFEDFMVKMAASKNLPKTSQPPVGVFAEVYEKIAAEDDEIISIHLTEALSGTV EAARQGGMLSGRNVTVIDSDFTDQAQKFQVVEAARLAKAGASKEEILEKIKYIRENTE LFIGFSTLENLVKGGRVSRMTGLFGSLLQVRVIGTLKDRELNTLLRGRGSKTFYKWLE ELSDSISSSGRKIREIGISHAQGLEFSQKAKEVLQKFVEKPISILDTNTTIATHTGPG AWAIMIDYE" gene 499499..500359 /gene="yejI" /locus_tag="L99502" /db_xref="GeneID:1114118" CDS 499499..500359 /gene="yejI" /locus_tag="L99502" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266655.2" /db_xref="GI:30024000" /db_xref="GeneID:1114118" /translation="MNDKSKNMMKNFIRTFAGLLLAILLILGFFLLVFPKAGDRFLAD KKVSTLSAKNLTYAALGDSLTEGVGDATGQGGFVPLFAKDIENKTDSSVSSQNFGKAG DTSTQIYNRMMKSKKITDGLKKADIITITIGGNDVLKVIRDNVSKLSSMTEKDFTKPE ELYQARVKKLLDKIREDNPKAQIYVLGIYNPFYLNFPELTVMQNVIDSWNTATAGVVS QEKNTYFIPINDLLYKGSGDKQAVESGSTSDAVSNNLLYTEDHFHPNNVGYQLMADAV FASYKEVNQK" gene 500356..501567 /gene="yejJ" /locus_tag="L100350" /db_xref="GeneID:1114119" CDS 500356..501567 /gene="yejJ" /locus_tag="L100350" /note="similar to glycosyl hyrolases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266656.1" /db_xref="GI:15672482" /db_xref="GeneID:1114119" /translation="MTKRLKKKAKPVVFLALVLGCALILSGVLGLAGHLNEQESSKTK KKSQLSETKRSSTSPKNMDKNIEQMTLEQKVGQLFMTGMPANNYNQATFDAIEKYQVG SIILTGRSNLSVPEMKDITDKLQGLEPANRKLLISCDQEGGNVQVLQGQGFSQIPDGL TQGSWTADKLQKESQTWGSELYAAGVNFDLAPVADQVLSADFAPQNAPIGYWSRQYAY DKASIISHAQAFTEGMKAAKVLTTAKHFPGLGAVTGNTDISAGVRDDQTNSNSESVQI FKDLISSGTPSIMTATAIYDKIDPNLPGAFSSKMVDGLLRKQLGFDGLVITDDLSNAV QVQSWTPGQRAVLALSAGNDLVLANEPTQIPEMISEVLQKVKADPDFAKKISQSATRV IKVKEEMKLVE" gene 501577..502233 /gene="yfaA" /locus_tag="L101577" /db_xref="GeneID:1114120" CDS 501577..502233 /gene="yfaA" /locus_tag="L101577" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266657.1" /db_xref="GI:15672483" /db_xref="GeneID:1114120" /translation="MENNENQTRKSKTKNSTKPKTEKEEGLKKRPIWKWLFIILLALN IAGVVFIAIRVTSPRDQTVLNQKSTNSSDQKVAQITSTTSQLNELINSYLETYQTKEM TYKFYISNQQAVLEASYKLFGTKIPLYIYFEPLALSDGSISLSVQNISAGSLSLPTSE VLQIVKAYDLPDFVQVESKKNQVVINLSKINVSGNLYIKANQIDLAKGNFVFDFMKKA" gene 502338..502613 /gene="hslA" /locus_tag="L102317" /db_xref="GeneID:1114121" CDS 502338..502613 /gene="hslA" /locus_tag="L102317" /note="DNA replication, restriction, modification, recombination, and repair" /codon_start=1 /transl_table=11 /product="HU like DNA-binding protein" /protein_id="NP_266658.1" /db_xref="GI:15672484" /db_xref="GeneID:1114121" /translation="MANKQDLIAEVAAKTGLTKKDSEKAVNAFGEVVTEFLAKGEKVQ LIGFGTFETRERAAREGRNPQTGEAIKIAATVVPAFKAGKALKDAVK" misc_feature 502595..517773 /note="Bacteriophage bIL312" /db_xref="taxon:151539" gene complement(502723..503871) /gene="ps201" /locus_tag="L102735" /db_xref="GeneID:1114122" CDS complement(502723..503871) /gene="ps201" /locus_tag="L102735" /note="prophage ps2 protein 01" /codon_start=1 /transl_table=11 /product="integrase" /protein_id="NP_266659.1" /db_xref="GI:15672485" /db_xref="GeneID:1114122" /translation="MWIENLPNGKYKYFERYRDPLTEKLKKVSVTLDKKTPRAQKVAQ AELLEKIESKINNSSTSNAKFTDIAEEWWSFYKKSIKQSSISALQSSFNFIIDYFDKE IKISNVTSKVIQKFINDADCPRSKLERSKSTLNLIFDYAVDLEYIEYNPARKAKLPKK IQTVKDLEKIQNKYLEQNELKALLSELYSRPNTRRLALLAEFMSLNGCRMGEAIALKK ENYKRSERKIDIHGTLDKTVGYSKGVKTTPKTASSFRTVDLSDREIEILDEIIEQNNL SKSVINDYNEMGYIFVSKRGIPLQTNSFNLAIKRANSRLKSPINKNLSSHIFRHTLIS YLAENNVPLKAIVDRVGHKDGGKTTTAIYTHVTENMKSSIIDILNKKN" gene complement(503995..504486) /gene="ps202" /locus_tag="L104007" /db_xref="GeneID:1114123" CDS complement(503995..504486) /gene="ps202" /locus_tag="L104007" /codon_start=1 /transl_table=11 /product="prophage ps2 protein 02" /protein_id="NP_266660.1" /db_xref="GI:15672486" /db_xref="GeneID:1114123" /translation="MKKILITIMGLLLILSLFSFSDIASAKTKKSVKKKSFTVHNVYK IYYSKVDSKTTGVITETGPDVARFIRVGYSAKVDTLKNAEKAKKNAKLFLNNVVKNIK PPKNEDDVIIIQYGEGEGFDRSKNFQTFFNILLNKNSYNILKENKGDFTKLDKQDYSN NGY" gene complement(504540..504836) /gene="ps203" /locus_tag="L104552" /db_xref="GeneID:1114124" CDS complement(504540..504836) /gene="ps203" /locus_tag="L104552" /codon_start=1 /transl_table=11 /product="prophage ps2 protein 03" /protein_id="NP_266661.1" /db_xref="GI:15672487" /db_xref="GeneID:1114124" /translation="MEMFTKTQKAQSDNIYEKEVKSHIAPKDGFTHVLMINSLSKWIN QLFGVEDKYTTQIDNILTKMQKEGYEIISVEHTAIKNQGLFKDMEGFHTLISYK" gene complement(504883..505470) /gene="ps204" /locus_tag="L104895" /db_xref="GeneID:1114125" CDS complement(504883..505470) /gene="ps204" /locus_tag="L104895" /note="similar to gp17v protein of Escherichia coli bacteriophage KVP40" /codon_start=1 /transl_table=11 /product="prophage ps2 protein 04" /protein_id="NP_266662.1" /db_xref="GI:15672488" /db_xref="GeneID:1114125" /translation="MNEQELIGYLLLEMEKQNIHITCDDCFPKNAMVNIKRKLMIYNP TKITAFKIAHELSHVINKDICRGSENDALNPQEFRANHEAILLLWEIFEANGGSYEYF NVFVDITESPFELAESIIKNEYLELHEAITEIFEDEIKVSINKQEMHDYIVDYIGYFD VIEAINVYQFLDRYHLSHNFFNMAEKEFQQLLGVG" gene complement(505482..505850) /gene="ps205" /locus_tag="L105494" /db_xref="GeneID:1114126" CDS complement(505482..505850) /gene="ps205" /locus_tag="L105494" /note="prophage ps2 protein 05; similar to Rad protein of Lactobacillus bacteriophage phi adh" /codon_start=1 /transl_table=11 /product="transcription repressor" /protein_id="NP_266663.1" /db_xref="GI:15672489" /db_xref="GeneID:1114126" /translation="MDLYEKIKELAAQKHTSIRKIEEHLGYGNGTIRRWNKNKPNYDK IQAVAKYFNVSVDYLLGNEELKKTNKPVDLKKVISEKKPTSWDDPRIDWNEWVSFDGE PISDDVKKILFAIYGDKLTD" gene 506144..506335 /gene="ps206" /locus_tag="L106117" /db_xref="GeneID:1114127" CDS 506144..506335 /gene="ps206" /locus_tag="L106117" /note="similar to Orf65a of Lactobacillus bacteriophage phi adh" /codon_start=1 /transl_table=11 /product="prophage ps2 protein 06" /protein_id="NP_266664.1" /db_xref="GI:15672490" /db_xref="GeneID:1114127" /translation="MPTSDNGLRLVNSFIEETGIEKMSLAAKYGVAKNVMIDILSGHL QSPKAHQVILKIIDDFKLR" gene 506351..506611 /gene="ps207" /locus_tag="L106345" /db_xref="GeneID:1114128" CDS 506351..506611 /gene="ps207" /locus_tag="L106345" /note="prophage ps2 protein 07; similar to excisionase of Streptococcus pneumoniae transposon Tn5252" /codon_start=1 /transl_table=11 /product="excisionase" /protein_id="NP_266665.1" /db_xref="GI:15672491" /db_xref="GeneID:1114128" /translation="MPYAKITYLPVENAEDAEWCDKKHLMQKWEGLTKGTLTAWLTEM RDRPEFKKGVLNPTHGLVFINKEVFKDFVEWKEATRYKSYKK" gene 506770..506964 /gene="ps208" /locus_tag="L106731" /db_xref="GeneID:1114129" CDS 506770..506964 /gene="ps208" /locus_tag="L106731" /codon_start=1 /transl_table=11 /product="prophage ps2 protein 08" /protein_id="NP_266666.1" /db_xref="GI:15672492" /db_xref="GeneID:1114129" /translation="MNNTTNKETYILDDSIAFELMDLLKAKARHFIKLNEYVYRLFDG QSVVTFTTLENDIQVEMIKG" gene 506969..507394 /gene="ps209" /locus_tag="L106963" /db_xref="GeneID:1114130" CDS 506969..507394 /gene="ps209" /locus_tag="L106963" /codon_start=1 /transl_table=11 /product="prophage ps2 protein 09" /protein_id="NP_266667.1" /db_xref="GI:15672493" /db_xref="GeneID:1114130" /translation="MATIDEQLNVRTEIEQAVAKQCDYTEFNPVFEDLFFSLNWLEEQ DGLKLEKYDIYKALMTAYSVGFNRGKKAHKPTKWLEKETEEFEDYWQLYNTVKNQAIK DISGGSEVRQSREFNSLVTRRMYEAGMAEEKKNWTSWDK" gene 507429..507668 /gene="ps210" /locus_tag="L107339" /db_xref="GeneID:1114131" CDS 507429..507668 /gene="ps210" /locus_tag="L107339" /codon_start=1 /transl_table=11 /product="prophage ps2 protein 10" /protein_id="NP_266668.1" /db_xref="GI:15672494" /db_xref="GeneID:1114131" /translation="MQNIIRACPYVAGIDSVGLRSLKGYHTELTDKQIEKLDPLNANT GTVDYSFKVRKYKQGVRFEGEKEGGEISLFDEVAK" gene 507665..507919 /gene="ps211" /locus_tag="L107665" /db_xref="GeneID:1114132" CDS 507665..507919 /gene="ps211" /locus_tag="L107665" /codon_start=1 /transl_table=11 /product="prophage ps2 protein 11" /protein_id="NP_266669.1" /db_xref="GI:15672495" /db_xref="GeneID:1114132" /translation="MIEHHQGYTAIKRYGRNSFRPAGKHPFKMIHNARAVKYDLIQQF EASTGILLSSGMKSNLCTQPVPFLGKQLAVMKVQIKENKP" gene 507916..508110 /gene="ps212" /locus_tag="L107922" /db_xref="GeneID:1114133" CDS 507916..508110 /gene="ps212" /locus_tag="L107922" /codon_start=1 /transl_table=11 /product="prophage ps2 protein 12" /protein_id="NP_266670.1" /db_xref="GI:15672496" /db_xref="GeneID:1114133" /translation="MKITIDVLENESNKDNLEYLISDTSNEAITVLMFALIGEARQRA SYEQFLETITRIWGYMNEDN" gene 508097..508423 /gene="ps213" /locus_tag="L108106" /db_xref="GeneID:1114134" CDS 508097..508423 /gene="ps213" /locus_tag="L108106" /codon_start=1 /transl_table=11 /product="prophage ps2 protein 13" /protein_id="NP_266671.1" /db_xref="GI:15672497" /db_xref="GeneID:1114134" /translation="MKITDLQKIDQNIIKILADHKGIDKAINGKMLAQSLNVDFRTLQ GRISFLQGKGCAIGSIDNIGYFAPTNEEERTKGITKKENMAYSTLKAVMGVRSASLDW LDEMID" gene 508431..509009 /gene="ps214" /locus_tag="L108425" /db_xref="GeneID:1114135" CDS 508431..509009 /gene="ps214" /locus_tag="L108425" /codon_start=1 /transl_table=11 /product="prophage ps2 protein 14" /protein_id="NP_266672.1" /db_xref="GI:15672498" /db_xref="GeneID:1114135" /translation="MELLTIRLNKIVAKKLMKGGGETLILEKEDFYQYVYLVPNNMSF SGHFDSVLDISVSQHWEIFNFLTSKYQEQGYKKVHYKHPAHPSNKFMKFLNKLQRDQS EKVATVYRQNAFEKFKDEIVMHQGFLNSKNMMKFIILGKKHGYNYKYLMMWAVSEIEA TCDGTQKQGLLADFISLADEYFDEKEREVLSD" gene 509002..510444 /gene="ps215" /locus_tag="L109011" /db_xref="GeneID:1114136" CDS 509002..510444 /gene="ps215" /locus_tag="L109011" /note="similar to Orf11 of Staphlococcus aureus transposon Tn557" /codon_start=1 /transl_table=11 /product="prophage ps2 protein 15" /protein_id="NP_266673.1" /db_xref="GI:15672499" /db_xref="GeneID:1114136" /translation="MTNVDDDFQNMINSYEEEKAKAESKKSEQKPPQSDKIVKVKFEA ENFALNQYGKPKVNSLKNIRIAIENDNILKNQFVFNSFTQEIEIRTPFKLRGVEIEND GLKEVYITAILEHFEEKYDVLFDSRLLVNVINKIAYENKYNPVQDFMEDCYKNWDKVK RARSLFPDYLGAKESDLTERMTKLFFVGAVSKVYRPHDKFDFVLDLVGGQGSGKTTFL TKMGQGWYTDSMKNFDDKDQLVMMLRALIVNDDEMAISNKIPFADLKKFITQTVLSFR APYGTKVENYAKNFVIARTTNHEEYQKDRTGARRFLPVHCSKELQKYHPVSDLDDATV RQVWGEMVHYYKEGFSFKLSEEEEKQLNLERSDYEYFDEQEELLEQYLEIPIPTDFYK VQGNNTRMHERRAYIGFILQSGETPKHEFRGEIKPREFVTATYFYWEAMGIETGKGSA KIVSKFKNSMNNKNGWQKSKRKGTRGYKRE" gene 510596..511180 /gene="ps216" /locus_tag="L110560" /db_xref="GeneID:1114137" CDS 510596..511180 /gene="ps216" /locus_tag="L110560" /codon_start=1 /transl_table=11 /product="prophage ps2 protein 16" /protein_id="NP_266674.1" /db_xref="GI:15672500" /db_xref="GeneID:1114137" /translation="MNNSYPKSWSRIMTQTIAELNKKKNLTRLDLKRGALALVKGLNV RNKKINAESEANYIKAVWDNFQLYEMALSVIGMLTPKEVIETFPIYKRYDGHKYETKD YFSVQKSLAAYDLNQPINTVDDKAFEFLWDYDNDDLVEFAVDFMGAMSHINRLEKGKD LFSQFLEETQGIKSRVIEINGIEVITFDNDDELD" gene 511357..511542 /gene="yfbB" /locus_tag="L111351" /db_xref="GeneID:1114138" CDS 511357..511542 /gene="yfbB" /locus_tag="L111351" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266675.1" /db_xref="GI:15672501" /db_xref="GeneID:1114138" /translation="MAKDKIKNLEIPVAENERNKAVENLLSLKEYFDNQLQSDQETHQ AIATLGDKLGVLWNADK" gene 511569..512177 /gene="ps218" /locus_tag="L111521" /db_xref="GeneID:1114139" CDS 511569..512177 /gene="ps218" /locus_tag="L111521" /codon_start=1 /transl_table=11 /product="prophage ps2 protein 18" /protein_id="NP_266676.1" /db_xref="GI:15672502" /db_xref="GeneID:1114139" /translation="MQVKYIEEAKNKLEKQAKPLTQKFDKTNQLISELKNKIEKMENQ SQNDDIDESLKALSELNNAKQLLETLEKRLTEEQKELDVFWSSQEVDDTIGEALSRAD SLSNIQQDLLKITLSKDTKKKLKEYNKEVDDQRYRLQESGNYLLEKSNVYSRSPLNNL IGQKNGSHKNNWFFGIVRVMADQYEKELMAFLKSEKIMTDLD" gene 512186..512776 /gene="ps219" /locus_tag="L112195" /db_xref="GeneID:1114140" CDS 512186..512776 /gene="ps219" /locus_tag="L112195" /note="similar to Orf26 of Bacillus subtilis bacteriophage phi-105" /codon_start=1 /transl_table=11 /product="prophage ps2 protein 19" /protein_id="NP_266677.1" /db_xref="GI:15672503" /db_xref="GeneID:1114140" /translation="MTKKTEINFGIDSKLEIRDANKKAGFIGQIAGYAIVFNKPSVPN APFIEYIAPTALDNVDLSDVLALYNHDYANVLGRVDAGTLKLSIDNIGLHFVLDMPDT TVGHDVYNNIKAGNLKGMSFGFVVADGGDSWQQGVSKPIRTINQLQTLGEISVVSKPA YDDTSINVTRSIKQFEDERTRKYKEKVRAYLDGLSD" gene 512992..513321 /gene="ps220" /locus_tag="L113001" /db_xref="GeneID:1114141" CDS 512992..513321 /gene="ps220" /locus_tag="L113001" /codon_start=1 /transl_table=11 /product="prophage ps2 protein 20" /protein_id="NP_266678.1" /db_xref="GI:15672504" /db_xref="GeneID:1114141" /translation="MVRYYWGRPQDVVRWYLRGTLYLSAQSRKSYIEKTGAERGNLPR LLKLLDNLDELFDSVDTDSIAVLCLRYVELLSVAETTKRTGLLAYQITAKTGKIMKKA KEIISKA" gene 513422..513742 /gene="ps221" /locus_tag="L113377" /db_xref="GeneID:1114142" CDS 513422..513742 /gene="ps221" /locus_tag="L113377" /codon_start=1 /transl_table=11 /product="prophage ps2 protein 21" /protein_id="NP_266679.1" /db_xref="GI:15672505" /db_xref="GeneID:1114142" /translation="MNELEFNIRLYLIGTMKSWTDRIDSTDQLTPQRFIFNAMTELFD SLSDDDLELIRLRYMERLTLSEVASRHLLNERTIRNHTNPTIKQVKKIIKQGNELSIK QKSP" gene complement(514066..514338) /gene="yfbG" /locus_tag="L114078" /db_xref="GeneID:1114143" CDS complement(514066..514338) /gene="yfbG" /locus_tag="L114078" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266680.1" /db_xref="GI:15672506" /db_xref="GeneID:1114143" /translation="MFIFYVFVAALIWAGVSYWLHKNKPLKNAGEVQQVYLIITSISV IIIALIILVFLIYMMVSSKSLDNLSWAIICILVIAVAALFFKENKI" gene 514455..514676 /gene="yfbH" /locus_tag="L114419" /db_xref="GeneID:1114144" CDS 514455..514676 /gene="yfbH" /locus_tag="L114419" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266681.1" /db_xref="GI:15672507" /db_xref="GeneID:1114144" /translation="MIYFLIKLKNGGSNMKFEGTWLVVIILSIEVLAFGEFEQSNQIL LIGGISIILSTLFEASTLIRHFIKEQTKV" gene 514845..515333 /gene="yfbI" /locus_tag="L114740" /db_xref="GeneID:1114145" CDS 514845..515333 /gene="yfbI" /locus_tag="L114740" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266682.1" /db_xref="GI:15672508" /db_xref="GeneID:1114145" /translation="MSKKYYFENVDELVQHLIFKYKELSPLKLQKSLYFLFAFYAGNY QISEEQGVAESDYDYPKYLFKADFEAWTYGPVIRHVYDKNKKDEYMAKEFNFEGNENS EISKFIDDVSEMIMAKSDFALVDRSHDDKAWKDAIAIGNSSPMSEEVIANEYKELFKN MG" gene 515299..515865 /gene="yfbJ" /locus_tag="L115302" /db_xref="GeneID:1114146" CDS 515299..515865 /gene="yfbJ" /locus_tag="L115302" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266683.1" /db_xref="GI:15672509" /db_xref="GeneID:1114146" /translation="MSTKNYSKIWDKSSSEKKYDDKLASNTLLDSNKILETDNKAEIK FYSDDSKKSFLEKEDQFTNFLNKNQVEDFKFRMLEFLTKPNSLYNSTSHWHKVDKNKR LKHLFSLKLSAEDITKHLDDVHKVHIVDNFGTMTAYRIYLYKNIEKNEYLIFLIDPLH LAIPSEETLNDKVYINNRSNTICISDII" gene 516184..516366 /gene="yfbK" /locus_tag="L116178" /db_xref="GeneID:1114147" CDS 516184..516366 /gene="yfbK" /locus_tag="L116178" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266684.1" /db_xref="GI:15672510" /db_xref="GeneID:1114147" /translation="MLTTREQYRIMKLLTKHYKSSKITLKILLGRVTVGSSCLPQVIL RSGFFYIKKALALSQC" gene 517114..517314 /gene="cspD" /locus_tag="L117090" /db_xref="GeneID:1114148" CDS 517114..517314 /gene="cspD" /locus_tag="L117090" /note="adaptations and atypical conditions; cold-shock domain family (CSD)" /codon_start=1 /transl_table=11 /product="cold shock protein D" /protein_id="NP_266685.1" /db_xref="GI:15672511" /db_xref="GeneID:1114148" /translation="MANGTVKWFNADKGFGFITSEEGKDLFAHFSAIQSDGFKSLDEG QKVEFDVEEGQRGLQAVNITKA" gene 517530..517603 /locus_tag="L200093" /db_xref="GeneID:1113550" tRNA 517530..517603 /locus_tag="L200093" /product="tRNA-Met" /db_xref="GeneID:1113550" gene complement(517855..518352) /gene="yfbM" /locus_tag="L117867" /db_xref="GeneID:1114149" CDS complement(517855..518352) /gene="yfbM" /locus_tag="L117867" /note="regulatory function" /codon_start=1 /transl_table=11 /product="transcription regulator" /protein_id="NP_266686.1" /db_xref="GI:15672512" /db_xref="GeneID:1114149" /translation="MKVILRKALPDDYEQIAFVHYKAWLETYTGLLPESFLKNRTLES SINIFKNNLCSNTVVAIVEGKIIGFCGWGPLRNNSFEENFGEIHGIYLLDSYKKHKIG RKMLEFALEKLSTKNYPKVGLWVLSSNENAIHFYKKLGFSDTGIVKEENLGEIITESF FTKEI" gene 518499..519008 /gene="ogt" /locus_tag="L118481" /db_xref="GeneID:1114150" CDS 518499..519008 /gene="ogt" /locus_tag="L118481" /note="DNA replication, restriction, modification, recombination, and repair" /codon_start=1 /transl_table=11 /product="6-O-methylguanine-DNA methyltransferase" /protein_id="NP_266687.1" /db_xref="GI:15672513" /db_xref="GeneID:1114150" /translation="MLTKKNYQSPLGEITLLSDETYLLGVWFKEQKYFAANYDLNQAK EDKSLPIINAIDWLDAYFKGENPDLKKIKLKPEVTEFRKKVLKILSDVPYGSLITYKE ISNLLQVNEEKKRNMSQAVGGAVGHNPLSIIIPCHRVVGTDGSMTGYAGGLEKKKALL TLEQAHLKK" gene 519022..519582 /gene="adaA" /locus_tag="L0149" /db_xref="GeneID:1114151" CDS 519022..519582 /gene="adaA" /locus_tag="L0149" /codon_start=1 /transl_table=11 /product="methylphosphotriester-DNA alkyltransferase" /protein_id="NP_266688.1" /db_xref="GI:15672514" /db_xref="GeneID:1114151" /translation="MEITDETWEIIKNNDKNFDNKLWYGVATTKIFCRPSCVSRLPKR ENVSIFQAAEQALEEGYRPCKRCRPMDKIIPNEVWVEEIDLLLKNHYDEDLSLEELGQ RLHGSSSYLRHIYKKIKGLTPQQELTRIRLEQARIRLLKGNEAISEIARDVGMMNTPY FIKSFKKRYGLAPNQYRKAYNINSKK" gene 519676..520485 /gene="yfcA" /locus_tag="L119676" /db_xref="GeneID:1114152" CDS 519676..520485 /gene="yfcA" /locus_tag="L119676" /note="transport and binding protein" /codon_start=1 /transl_table=11 /product="ABC transporter ATP binding protein" /protein_id="NP_266689.1" /db_xref="GI:15672515" /db_xref="GeneID:1114152" /translation="MKIKNIKKSYGNNQVLNDISFELKAGDKVALLGNNGAGKSTLMN IINGNVKASSGKIEYGKMKPTSNNTGYIMQNMTLPPDALVSEVLALFSNDEQSKEYGL KLVKEFKMESYLRQRFSNLSGGQKQKLFLVSALQNSPEYFFLDEITTGLDSESRGELF KFLSSNLKVKNSTLLLVTHYLEEALQLCDRFIILKDGKIIADLQKSDLIQEEFSFVEF LVEVPEFEAYKLKEKQYKLPKELAEQAIIKFNKELVLYQKTYRINLEELLS" gene 520482..521207 /gene="yfcB" /locus_tag="L120437" /db_xref="GeneID:1114153" CDS 520482..521207 /gene="yfcB" /locus_tag="L120437" /note="transport and binding protein" /codon_start=1 /transl_table=11 /product="ABC transporter permease protein" /protein_id="NP_266690.1" /db_xref="GI:15672516" /db_xref="GeneID:1114153" /translation="MKFLKYFTFELRLRYRNPSQILFVFIFPLFLMFAFSSSFGKSIP HYIENNIASILLYSVLSASLTSLSVQIADHQSGKIYQLFVQRGIKKLFYIIAQIVSFM IIIFCSTLVILVVAHYAYDYEFPKLSLLILFYLKLYLYSIPFCLLAMIIGLLAKNTAT ASAIAMPLMFLSFFFSGMMIPLAQLSGGIRKIADNFFLTQLLSDLNHTLTSNYTVVPN WSRISLSVGLICLLALLVYRRKA" gene 521270..521728 /gene="yfcC" /locus_tag="L121252" /db_xref="GeneID:1114154" CDS 521270..521728 /gene="yfcC" /locus_tag="L121252" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266691.1" /db_xref="GI:15672517" /db_xref="GeneID:1114154" /translation="MKLKKQIDPNIEEAEIVIVARRQEEFSAIVKEYHLEDLSSIDNE KLYLATNKGFEIVNIREILYLKSEKNYLDFHMTDGVIRVRSPLYFYEKKLALNFIKIS RNTLVNFEQIRRLETDFVYGVLLYLGNEKLPVSRKYLANINKKLEEGAKK" gene 521725..522102 /gene="yfcD" /locus_tag="L121731" /db_xref="GeneID:1114155" CDS 521725..522102 /gene="yfcD" /locus_tag="L121731" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266692.1" /db_xref="GI:15672518" /db_xref="GeneID:1114155" /translation="MKYVISGLKGAFIAIVCGVLLTLYFGGKIDFESMTLILVYGFVQ GAMSKVIDEYVTIALLEFVSQALASYLLAWGYLLVNTWLFDSSWQHHIWSFTITWLLI FILVYLYSIVRNRKIVKRFNRQK" gene 522216..523361 /gene="nifZ" /locus_tag="L122222" /db_xref="GeneID:1114156" CDS 522216..523361 /gene="nifZ" /locus_tag="L122222" /note="energy metabolism, electron transport; similar to NifZ of Bacillus subtilis; cysteine sulfinate desulfinase/cysteine desulfurase, evidenced by COGnitor" /codon_start=1 /transl_table=11 /product="pyridoxal-phosphate dependent aminotransferase" /protein_id="NP_266693.1" /db_xref="GI:15672519" /db_xref="GeneID:1114156" /translation="MIYFDNSATTAVNPMVLRTYTDVATKIMGNPSSLHGLGTTATRL LEASRRQIAELLGVDSQEIFFTSGGTEGDNWILKGVAFEKRPYGNHIIVSNVEHPAVK NTAEWLKTQGFEVDFAPVDGDGFVIVSELEKLIRDETILISIMAVNNEVGTIQPIGEI SDLLADKPTISFHVDAVQAIGKIPLEAWLTERVDFAVLSAHKFHGPRGVGIVVAKKGK RLTPLLHGGGQEHNWRSTTENLAGIAATSKALRLALDDDDFKRQKVRAMKQVILEELE KHRKVHVFSKVENFAPNILTFGIRGVRGEVVVHAFEQHEIYISTTSACSSKKNAAAGT LVAMNVPSKLATSAVRISLDSTNNMAEVEQFLTVFRQIYQELEKVSG" gene 523468..524346 /gene="yfcF" /locus_tag="L123471" /db_xref="GeneID:1114157" CDS 523468..524346 /gene="yfcF" /locus_tag="L123471" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266694.1" /db_xref="GI:15672520" /db_xref="GeneID:1114157" /translation="MEKRTRDYKKNGSKKMSKQGKVLILALLAFLIFFVGFKIYHSKD VQASTIKLVNKSNETYAYSGSKKLTGLQKINGNNYYFDSTTGVMKTGLMTLDGGTVYF SPQTGKMVYGLQKINGYYYYFTKKTGKDDVVKAYEAVASQLKSDNSVIEKTISSGMKL VGKSPYVYGGGRTDDSVAANEFDCSSFIAQMFRLGGQSLVYQFAASTSLLAQTGEAED WSDKARGDLLITADDASEDEQHAAIYLGGGFILHDSTSTNGVSISRLNQVINKKVLGT MTWGQLFEPGHVRREV" gene complement(524403..526052) /gene="yfcG" /locus_tag="L124415" /db_xref="GeneID:1114158" CDS complement(524403..526052) /gene="yfcG" /locus_tag="L124415" /note="transport and binding protein; amino acids, peptides and amines; probably a substrate binding protein of an oligopeptide or aminoacid ABC transporter" /codon_start=1 /transl_table=11 /product="peptide-binding protein" /protein_id="NP_266695.1" /db_xref="GI:15672521" /db_xref="GeneID:1114158" /translation="MNKSKIFAFSAFSLSAALLLTACGNSVSKSEDSAQEAKYSFASN ILTLDTSMAADVNSIDVLLNVDAGLVRWNPKAQVVNNLAKSIDISKDGKTYNVTLRDG LKWSNGAKLRAADFVYGWQRTVDPKTGSQYAYALTPVANASEIMTGKKPVDTLGIKAE SDTKLVITLATPTPYFNKLLTLPAYYPVNEAFVKKMGNKYGTSSDTSLYNGAFKFVKG KNNWTGSNETFSIVKNDQFYDAKNVKLSGATYQIVNNPNTAVNLFKSGKLDVANLATP ELVSANKKNKDYKALTSPRIDVLEYNQSGKVPELSNLKIRQALNLATNRKNLLEIAAP SFSITNTVTPKKLDQAPNGEDFATYAAQPYKYDATKAAELFKEGLKELGKTSITLELE GANDNSFAKAAVDYLKGNLEKDLPGLTINEKLVSSAQRQKDAQNNNFQILLTSWGADY NEPSDFLMNFVSGSTMNHGLVKNPNFDKAYQAATTAPDVLSADKRYAHYKDAENALYE AANVNPLATESVSLLLNPKLKGISTYNSAMIFDLRHAEIAK" gene complement(526263..527195) /gene="cysM" /locus_tag="L0088" /db_xref="GeneID:1114159" CDS complement(526263..527195) /gene="cysM" /locus_tag="L0088" /EC_number="2.5.1.47" /note="serine family" /codon_start=1 /transl_table=11 /product="cysteine synthase" /protein_id="NP_266696.1" /db_xref="GI:15672522" /db_xref="GeneID:1114159" /translation="MTKIYDNITELIGQTPIVKLQHVPAESADVYVKLEAFNPGGSVK DRIALAMIRAAEADGHLKPGGTIVEPTSGNTGIGLAFVGSALGYKVVIVMPESFSLER RKLIQAYGAQLVLTPASGGMKAAIAKAKELSETEGYFLAMQFENPANPEIHEKTTGAE IIDAFGPTGLDAFVAGAGTGGTITGVSHALKKANPTIKTYVVEADESAILSGEAAGPH KIQGISAGFIPGNLDTKSYDEIIRVKGDDAILTARHLGGKEGFLVGISSGAAIYAALE VAKKLGKGKKVLAIAPDNGERYLSTALYDFESEK" gene 527413..528498 /gene="acmD" /locus_tag="L127411" /db_xref="GeneID:1114160" CDS 527413..528498 /gene="acmD" /locus_tag="L127411" /EC_number="3.5.1.28" /note="cell envelope, murein sacculus and peptidoglycan; muramidase needed for cell separation and responsible for autolysis" /codon_start=1 /transl_table=11 /product="N-acetylmuramidase" /protein_id="NP_266697.1" /db_xref="GI:15672523" /db_xref="GeneID:1114160" /translation="MKQKHKLALGASIVALASLGGIKAQAASVQEIINAAVPVANDYG LYPSVMIAQGILESSGGQSALASNYNNIFGVKYTSGTPVYLPTQEYLNGTMTNVVEPF QAYSSVYDACVAQAKMLRASSYYSGAWRENTSSYLDATAWLEGRYATDPTYASKLNSV ISELGLSVYDQGGEISGGTAVTTSSSASTNSAGTYKVQEGDSLSAIAAQYGTTVDALV SANSLENANDIHVGEVLQVAGASTTTTSTNTTSNVSSSSTYTVKSGDSLYSIAEQYGM TVSSLMSANGIYDVNSMLQVGQVLQVTVSTSATTSNTTTSNSYTIQNGDSIYSIATAN GMTADQLAALNGFGINDMIHPGQTIRI" gene complement(528537..529169) /gene="yfcI" /locus_tag="L128550" /db_xref="GeneID:1114161" CDS complement(528537..529169) /gene="yfcI" /locus_tag="L128550" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266698.1" /db_xref="GI:15672524" /db_xref="GeneID:1114161" /translation="MKIEKIVNKIAQENTYLLSNSTSHLIIDPGSDSSALLERLKITD KTISAILLTHAHFDHIIGLNELRKHFPDVPIYLHSAEKEWMKNPKLNASFFFLGTAVT GPEADYFYEINQFYDIDAFKFQVLETPGHSIGGVSLLFKLENESFVFSGDALFKNAIG RWDLPTGNQAQLLKSIREQLFTLDENTQVFPGHGPKTSIGTEKQNNPFFQ" gene complement(529170..531164) /gene="ponA" /locus_tag="L129183" /db_xref="GeneID:1114162" CDS complement(529170..531164) /gene="ponA" /locus_tag="L129183" /note="cell envelope, murein sacculus and peptidoglycan" /codon_start=1 /transl_table=11 /product="penicillin-binding protein 1A" /protein_id="NP_266699.1" /db_xref="GI:15672525" /db_xref="GeneID:1114162" /translation="MWTAVKLFLIAFFSLIILALAAGGAVFVYYAKDAPALTLDKLES KPSTKVYDSSEKVVATLGAEQRNLVKTDNIPVMLVNAVTSIEDHRFFNTRGIDPIRIA GAFVNNLKGGSLNGGSTLDMQLIKLSFFSTDESDQTLSVKIQEAWMALKLDQKWTKEQ IFTAYVNKVNMANGYYGMGTASQAYYGKDLTQLSIAQLALLAGMPQAPNTYNPYTNPT SAKWRRDMVIRAMRRYDKITAEEEKKALATPIDDGLQPLKQSVTIPSYADNFLKQAIA QAKTLAGDDILTEGAKIYTTLDTTAQQNLYNIVNTGNYITYPDDTMQVASTVTDVKTG AVIAQIGGRNQPSNVTFGFNQAVQTDRDWGSTMKPIVDYGPAFENNIYTSTNNYVSDS PTTYPNGTPLKNWDNTYFGSMTVKSALALSRNIPAVKTLINVGLDNSSKFVNGLGITL DPLEYSNAISSNSKNGGASSEKMAAAYAAFSNGGIYTKPYYVSKVVFPDGRTVEYKPD RSRAMQASTAYIMTNILQSVLTLPLSESVGSYAAVPGLAAAGKTGTSNYTDSEMDQIT EKYGSLPGMVSPDENFVGYTPQYSMAVWTGYSNRMTPIYGTSTQIATKVFSSMMTQLT PDPSSVATWTMPEGVSQEGTALVKTDSSGQTISQSSANGS" gene complement(531232..531873) /gene="recU" /locus_tag="L131245" /db_xref="GeneID:1114163" CDS complement(531232..531873) /gene="recU" /locus_tag="L131245" /note="functions in homologous recombination, DNA repair, and chromosome segregation; binds preferentially to three- and four-stranded DNA intermediates; introduces specific nick sites in four-stranded DNA substrates; functions similarly to Escherichia coli RuvC" /codon_start=1 /transl_table=11 /product="Holliday junction-specific endonuclease" /protein_id="NP_266700.1" /db_xref="GI:15672526" /db_xref="GeneID:1114163" /translation="MVNYPNGRSRAYSTVPKKKKSLTELSVTKKSTSKTKGMVAFGKR GMNFEAEINATNEYYLSRGLAVIHKKPTPIQIVKVDYPQRSRAKITEAYFRQASTTDY SGVYKGHYIDFEAKETQQKTVFPLKNFHEHQIVHMSNVLAQGGIAFVLLHFARLNETY LLPSSCLITFYYEKGGLKSIPLSHIRENGYKIETNHIPRIPYLEIVNKLCEVQ" gene 531954..532478 /gene="yfdB" /locus_tag="L131937" /db_xref="GeneID:1114164" CDS 531954..532478 /gene="yfdB" /locus_tag="L131937" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266701.1" /db_xref="GI:15672527" /db_xref="GeneID:1114164" /translation="MNSLLIMGYTSFDLGIFNEKDIKVSIIKKTIRRKLINFLEEGLR WIIFTGNLGFEYWALEVAKELQTDYDFQIGTIFSFETHGQNWNESNQVKLAAFKQVDF VKYAFETYESPSQFRQYNDFILENTEGAFVFYDEENETKLKYMVEKMKQNTNYEVYLL DFEDLQETFEEMNE" gene 532638..533024 /gene="yfdC" /locus_tag="L132585" /db_xref="GeneID:1114165" CDS 532638..533024 /gene="yfdC" /locus_tag="L132585" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266702.1" /db_xref="GI:15672528" /db_xref="GeneID:1114165" /translation="MIDLYLSPSCTSCRKARAWLQSHKVPFVEHNILTQPMTTNDLRH ILTKTENGTEDIISTRSKVFQKLAVDVDNLTINELLDLVTEFPNLLRRPIITDSKHLQ IGFNEDEIRAFLPREYRRAEMLSTID" gene 533116..533397 /gene="yfdD" /locus_tag="L133111" /db_xref="GeneID:1114166" CDS 533116..533397 /gene="yfdD" /locus_tag="L133111" /note="similar to YktA protein of Bacillus subtilis" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266703.1" /db_xref="GI:15672529" /db_xref="GeneID:1114166" /translation="MKENYNYPLDLSWSTTEMTEVLSFFNQVEKFYESKVEKEVFLES YNAFKKIVPSKMQEKQLGRDFELSSGYSLYHAVKEVKASGKRFVSADKA" gene 533381..534142 /gene="yfdE" /locus_tag="L133367" /db_xref="GeneID:1114167" CDS 533381..534142 /gene="yfdE" /locus_tag="L133367" /note="similar to myo-inositol monophosphatases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266704.2" /db_xref="GI:30024001" /db_xref="GeneID:1114167" /translation="MLTRLELAKDWVRDAGNFLKENIAAPLEITEKTRYDDLVTNFDK EVQEQIVANILHHFPEDKILAEEDEEKIKFDSEIPHLWVLDPIDGTTNFIVQKDNFAV MLAYYEYGVGKFGLILDVMKDKLYWCDSHKAFCNQKELELKERPLAQSLLGVNSYMYR SNSGGLLDLSHQTLGVRIIGSAGISYGQLLEGKIIGYFSSLQPWDYAAGSIIAERIGY VTLTISGESPHFNCRERVFTAPSYLISEIQKYIKK" gene 534233..535516 /gene="murA2" /locus_tag="L134243" /db_xref="GeneID:1114168" CDS 534233..535516 /gene="murA2" /locus_tag="L134243" /EC_number="2.5.1.7" /function="adds enolpyruvyl to UDP-N-acetylglucosamine; first committed step in peptidoglycan biosynthesis" /note="adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active" /codon_start=1 /transl_table=11 /product="UDP-N-acetylglucosamine 1-carboxyvinyltransferase" /protein_id="NP_266705.1" /db_xref="GI:15672531" /db_xref="GeneID:1114168" /translation="MMDKIIVKGGQTKLQGEVEIEGAKNAVLPLLAATLLASEGEVVL TNVPILSDVFMMNNLVNHLGTAISFDQEAKKIIAKSNSEIKTTAPYEYVSKMRASIVV MGPILARNGQARVSMPGGCSIGSRPIDLHLRGFEQMGATITQNAGYIEAKADKLKGAH IYLDFPSVGATQNLILAATLADGTTTLENAAREPEIVDLANLLNKMGANVKGAGTDTI IIKGVEKMHGANHSVVQDRIEAGTFMVAAAMTQGDVLIKDAIAEHNRPLISKLSEMGV NFIQEESGLRVVGPEKLKATSVKTLPHPGFPTDMQSQMTAAQAVAVGESVMVETVFEN RFQHLKEMRRIGLEVDITRNTALIQGNSNLQGAAVKSTDLRASAALILLGLVAKGQTT VRRLSHLDRGYYKFHEKLKALGADIIRVEDEDGEG" gene 535516..535710 /gene="yfdG" /locus_tag="L135490" /db_xref="GeneID:1114169" CDS 535516..535710 /gene="yfdG" /locus_tag="L135490" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266706.1" /db_xref="GI:15672532" /db_xref="GeneID:1114169" /translation="MFKKTIKFLGLRLSIIIIFVIVLLVLAAVLGLMVGYGFLGGGNP SNVFNHNLWKEVMDKLSPAK" gene 535867..537150 /gene="tig" /locus_tag="L0336" /db_xref="GeneID:1114170" CDS 535867..537150 /gene="tig" /locus_tag="L0336" /function="chaperone maintaining newly synthesized proteins in an open conformation" /note="Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer" /codon_start=1 /transl_table=11 /product="trigger factor" /protein_id="NP_266707.1" /db_xref="GI:15672533" /db_xref="GeneID:1114170" /translation="MTVSFEKTSDTKGTLSFSIDQETIKTGLDKAFNKVKANISVPGF RKGKISRQMFNKMYGEEALFEEALNAVLPTAYDAAVKEAGIEPVAQPKIDVAKMEKGS DWELTAEVVVKPTVSLGDYKDLTVEVEATKEVSDEEVETRLTNSQNNLAELVVKETAA ENGDTVVIDFVGSVDGVEFEGGKGSNHSLELGSGQFIPGFEEQLVGTKAGETVEVKVT FPENYQAEDLAGKEALFVTTVNEVKAKELPELDDELAKDIDEEVETLDELKAKFRKEL EESKAEAYNDAVETAAIEAAVANAEIKEIPEEMIHEEVHRAMNEFLGGMQQQGISPEM YFQITGTSEDDLHKQYEADADKRVRTNLVIEAIAAAENFTTSDEEVKAEIEDLAGQYN MPVEQVEKLLPVDMLKHDIAMKKAVEVIATTAKVK" gene 537561..539108 /locus_tag="L200142" /db_xref="GeneID:1115945" rRNA 537561..539108 /locus_tag="L200142" /product="16S ribosomal RNA" /db_xref="GeneID:1115945" gene 539202..539274 /locus_tag="L200094" /db_xref="GeneID:1113551" tRNA 539202..539274 /locus_tag="L200094" /product="tRNA-Ala" /db_xref="GeneID:1113551" gene 539413..542313 /locus_tag="L200143" /db_xref="GeneID:1115946" rRNA 539413..542313 /locus_tag="L200143" /product="23S ribosomal RNA" /db_xref="GeneID:1115946" gene 542397..542512 /locus_tag="L200144" /db_xref="GeneID:1115947" rRNA 542397..542512 /locus_tag="L200144" /product="5S ribosomal RNA" /db_xref="GeneID:1115947" gene 542516..542588 /locus_tag="L200095" /db_xref="GeneID:1113552" tRNA 542516..542588 /locus_tag="L200095" /product="tRNA-Val" /db_xref="GeneID:1113552" gene 542618..542690 /locus_tag="L200096" /db_xref="GeneID:1113553" tRNA 542618..542690 /locus_tag="L200096" /product="tRNA-Asp" /db_xref="GeneID:1113553" gene 542708..542780 /locus_tag="L200097" /db_xref="GeneID:1113554" tRNA 542708..542780 /locus_tag="L200097" /product="tRNA-Lys" /db_xref="GeneID:1113554" gene 542789..542870 /locus_tag="L200098" /db_xref="GeneID:1113555" tRNA 542789..542870 /locus_tag="L200098" /product="tRNA-Leu" /db_xref="GeneID:1113555" gene 542883..542955 /locus_tag="L200099" /db_xref="GeneID:1113556" tRNA 542883..542955 /locus_tag="L200099" /product="tRNA-Thr" /db_xref="GeneID:1113556" gene 542981..543052 /locus_tag="L200100" /db_xref="GeneID:1113557" tRNA 542981..543052 /locus_tag="L200100" /product="tRNA-Gly" /db_xref="GeneID:1113557" gene 543091..543164 /locus_tag="L200101" /db_xref="GeneID:1113558" tRNA 543091..543164 /locus_tag="L200101" /product="tRNA-Arg" /db_xref="GeneID:1113558" gene 543170..543243 /locus_tag="L200102" /db_xref="GeneID:1113559" tRNA 543170..543243 /locus_tag="L200102" /product="tRNA-Pro" /db_xref="GeneID:1113559" gene 543281..543354 /locus_tag="L200103" /db_xref="GeneID:1113560" tRNA 543281..543354 /locus_tag="L200103" /product="tRNA-Met" /db_xref="GeneID:1113560" gene 543367..543440 /locus_tag="L200104" /db_xref="GeneID:1113561" tRNA 543367..543440 /locus_tag="L200104" /product="tRNA-Met" /db_xref="GeneID:1113561" gene 543448..543520 /locus_tag="L200105" /db_xref="GeneID:1113562" tRNA 543448..543520 /locus_tag="L200105" /product="tRNA-Phe" /db_xref="GeneID:1113562" gene 543531..543601 /locus_tag="L200106" /db_xref="GeneID:1113563" tRNA 543531..543601 /locus_tag="L200106" /product="tRNA-Gly" /db_xref="GeneID:1113563" gene 543628..543701 /locus_tag="L200107" /db_xref="GeneID:1113564" tRNA 543628..543701 /locus_tag="L200107" /product="tRNA-Ile" /db_xref="GeneID:1113564" gene 543744..543831 /locus_tag="L200108" /db_xref="GeneID:1113565" tRNA 543744..543831 /locus_tag="L200108" /product="tRNA-Ser" /db_xref="GeneID:1113565" gene 544010..545923 /gene="dnaG" /locus_tag="L0269" /db_xref="GeneID:1114171" CDS 544010..545923 /gene="dnaG" /locus_tag="L0269" /EC_number="2.7.7.-" /function="synthesizes small RNA primers for Okazaki fragments on both template strands at replication forks during chromosomal DNA synthesis" /note="synthesizes RNA primers at the replication forks" /codon_start=1 /transl_table=11 /product="DNA primase" /protein_id="NP_266708.1" /db_xref="GI:15672534" /db_xref="GeneID:1114171" /translation="MVSLDTEVVNDLKSKVNIADLISQYVALSRTGKNYIGLCPFHGE KTPSFNVNAEKGFYHCFGCGRSGDAIEFLKEYNQVGFVDAVKELADFAGVTLNISDDR EEKNNPNAPLFEINNQAARLYNILLMSTELGERARKYLEERGITDDVIKRFNIGLAPE ENDFIFKNLSNKFDEEIMAKSGLFHFSNNNVFDAFTNRIMFPITNEYGHTIGFSGRKW QENDDSKAKYINTSATTIFDKSYELWNLDKAKPTISKQHEVYLMEGFMDVIAAYKAGI NNVVASMGTALTEKHIRRLKQMAKKFVLVYDGDSAGQNAIYKAIDLIGESAVQIVKVP EGLDPDEYSKNYGLKGLSALMETGRIQPIEFLIDYLRPENLANLQTQLDFIEQISPMI AKLPSITAQDAYIRKLVEILPDFEYNQVEQAVNLRRENMTITDHPVSNLDASSLTESF TDENDYSSLESVMPVDFEEAYYENNVKTQQTYRRSESAQVVQPSVQVPKLSRSEKAEE MLLHRMIYHSSVLKKFSQDENFRFVHKRYQDLFDKILLEAMVYEQIDESHLASELSDE ERSLFYQIISLDLPDTASSQEIKDLVSIFSNEMEQIKFEELIQQLATAEKAGNKERVL ELTLQIINQKKKL" gene 546000..547343 /gene="rpoD" /locus_tag="L0139" /db_xref="GeneID:1114172" CDS 546000..547343 /gene="rpoD" /locus_tag="L0139" /function="RNA synthesis, modification, and DNA transcription" /experiment="experimental evidence, no additional details recorded" /note="sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; primary sigma factor of bacterium" /codon_start=1 /transl_table=11 /product="RNA polymerase sigma factor RpoD" /protein_id="NP_266709.1" /db_xref="GI:15672535" /db_xref="GeneID:1114172" /translation="MAANKKRISQISKETGVQNRVLVEKAQEIGLLVKSHSSSVGPGE ERRLLEALNVKPVVVEKMDSPKTLARVEVKENGDTFNVKAYEKAVKSYITKRKPLGEA LDEEIMDELSVKFGIVDDALEDLFKQIQDAGISIVDKDGNPSPLALVTDEIEKEEVSD TAMDEIVTNVRIDDPVRMYLKEIGRYPLISLDEETKLAEAIIAGGEGAEFAKQMLAEA NLRLVVSIAKRYSGRGMQFLDLIQEGNMGLMKAVDKFDHTKGFKFSTYATWWIRQAIT RAIADQARTIRIPVHMVETINKLIRVQRNLLQELGRDPSPEEIGKELHMAPDKVREVL KIAQEPVSLETPIGEEDDSHLGDFIEDDVIESPVDYTNRILLREQLDEVMDTLTDREE NVLRMRFGLDDGRMHTLEDVGKQFKVTRERIRQIEAKAIKKLRHPRRSKPLRDFM" gene 547458..548201 /gene="yfeA" /locus_tag="L147423" /db_xref="GeneID:1114173" CDS 547458..548201 /gene="yfeA" /locus_tag="L147423" /note="RpiR family of transcription regulators" /codon_start=1 /transl_table=11 /product="transcription regulator" /protein_id="NP_266710.1" /db_xref="GI:15672536" /db_xref="GeneID:1114173" /translation="MNHLTSVEIYIWNYLEENKAKIIQMTVAQIAESAHVSPSSIIRT LKKKNFSGFSEYKNMEKQKLNRHDWIYGLTKDANQVVSENIEELLMTVRLLESENLAK VVENIFHAASVVIISRGLSVRIADSFARDLQFLDVKAVSLYQDNMQAYLEKLPRNTFV IGLSLSGETDLIVATAQKAKRDGKKVLAITGNYKSRLVEQSDLLLLAYQKNLSGKILV DYNNMLPLELIIHLLIQLYKQYKEYGAIV" gene 548432..549733 /gene="glpT" /locus_tag="L148346" /db_xref="GeneID:1114174" CDS 548432..549733 /gene="glpT" /locus_tag="L148346" /note="transport and binding protein, carbohydrates, organic alcohols and acids; similar to Lactococcus lactishexose phosphate transport in Accession Number X71493" /codon_start=1 /transl_table=11 /product="glycerol-3-phosphatase transporter" /protein_id="NP_266711.1" /db_xref="GI:15672537" /db_xref="GeneID:1114174" /translation="MYKMWQTRVLISTAFVYIGYYIIRLIFTVQQNDISKAYGFSMGQ IGTILSMFGIGYGISKLIMGTLADRANPNRYVATGLIVSAIINALYGTTQSFGMIVFL MLLNSVMQGMGAAACQRLVGLWFGRKAKGSIMARGTAFSIWSSAHNAGAFMCVAVINL SAFFFGASLQWSFWTASIVSIVIAIIVLFLGSDRPTTKGLPTIEEYSGDKVVIKDGEI VEGDVSNDNVFKIFFEYIVKNKLVWAVILTSLSIYVVRYGIMSWIPNYLVNIKGFDNS TAKWLTGIFELAAVPGVIIIGFITDLLKGRRAIMVLVSLIAMLACLITYFAATNHTLI IIVLLIMGTFIYAPATIVGLMVNEAVPKFANGMSTGTMGFCQYIIGEVTATLVIGWLV QAYGWSAGNIIVYIFAGIAILASIYILVHQNRLYKKIDDAG" gene 550016..550354 /gene="yffA" /locus_tag="L150017" /db_xref="GeneID:1114175" CDS 550016..550354 /gene="yffA" /locus_tag="L150017" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266712.1" /db_xref="GI:15672538" /db_xref="GeneID:1114175" /translation="MTTTVYFEKNGGIDIELRGARKVLSLRKHIKIDPENLESVQLVS DMKKPKFYKKVAGTNAWYYGGWFRENGENEFWDVRNNERVLVITTKNFKYKKLYIEVG PDFRLNPSKL" gene 550405..552651 /gene="clpE" /locus_tag="L0221" /db_xref="GeneID:1114176" CDS 550405..552651 /gene="clpE" /locus_tag="L0221" /experiment="experimental evidence, no additional details recorded" /note="evidence experimental PMID:10094684; adaptations and atypical conditions; CLPC subfamily" /codon_start=1 /transl_table=11 /product="ATP-dependent protease ATP-binding subunit" /protein_id="NP_266713.1" /db_xref="GI:15672539" /db_xref="GeneID:1114176" /translation="MLCQNCNINEATIHLYTSVNGQKKQIDLCQNCYQIMKSGGQEAL FGAGNASNGNSDEPFNPFNDIFSALHGQDFNGAASTQTPPTQTGGRGPRGPQNPRAKQ PKGMLEEFGINITESARRGEIDPVIGRDEEIKRVIEILNRRTKNNPVLIGEPGVGKTA VVEGLAQKIVDGDVPQKLQNKEVIRLDVVSLVQGTGIRGQFEERMQKLMDEIRKRNDV IMFIDEIHEIVGAGSAGDGNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALER RMQPVKVDEPSVDETITILRGIQARYEDYHHVKYTDEAIEAAAHLSNRYIQDRFLPDK AIDLLDESGSKKNLTLKFVDPEDINRRIADAETKKNEATQAEDFEKAAHFRDQITKLR ELQNHEVSDDEIPVITEKDIEQIVEQKTHIPVGDLKEKEQTQLINLADDLKAHVIGQD EAVDKIAKAIRRSRVGLGKPNRPIGSFLFVGPTGVGKTELAKQLAKELFGSSESMIRF DMSEYMEKHSVAKLIGAPPGYVGYEEAGQLTERVRRNPYSLILLDEIEKAHPDVMHMF LQILEDGRLTDAQGRTVSFKDSLIIMTSNAGTGKVEASVGFGAAREGRTKSVLGQLGD FFSPEFMNRFDGIIEFSALSKENLLKIVDLMLDEVNEQIGRNDIHLSVTQAAKEKLVD LGYNPAMGARPLRRTIQENIEDSIADFYIEHPEYKELVADLIDDKIVISNQAQETAET TDEEVPAE" gene complement(553073..553543) /gene="yffB" /locus_tag="L153086" /db_xref="GeneID:1114177" CDS complement(553073..553543) /gene="yffB" /locus_tag="L153086" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266714.1" /db_xref="GI:15672540" /db_xref="GeneID:1114177" /translation="MKLSSGWEQSVYVLLILARLPENRTMSSIALANRLKVSPSYLKK IIKSLVDEGLLRSTPGKNGGFSLNKELHDISFYDVFLAIEGRGRIFQSQGLLQNFIGS ESGKAKRCAITSALDEIENTLVRTLSNVSLAQVADETQYNYNLGYLDEWIDEMD" gene 553716..554729 /gene="gapA" /locus_tag="L0004" /db_xref="GeneID:1114178" CDS 553716..554729 /gene="gapA" /locus_tag="L0004" /EC_number="1.2.1.12" /experiment="experimental evidence, no additional details recorded" /note="evidence experimental PMID:7773380; glycolysis" /codon_start=1 /transl_table=11 /product="glyceraldehyde 3-phosphate dehydrogenase" /protein_id="NP_266715.1" /db_xref="GI:15672541" /db_xref="GeneID:1114178" /translation="MVVKVGINGFGRIGRLALRRIQEVEGVEVAHINDLTDPAMLAHL LKYDTTQGRFKGTVEVKEDGFDVNGKFVKVTAERNPEDIQWADSGVEIVLEATGFFAT KEKAEKHLHPGGAKKVLITAPGGNDVKTVVFNTNHTILDGTETVISAGSCTTNSLAPM ADALNKNFGVKGGTMTTVHSYTGDQMTLDGPHRGGDFRRARAAAENIVPASSGAAKAI GLVLPELSGLMKGHAQRVSTPTGSITELVTVLEKHVTVDEINEAMKAAADESFGYNVD EIVSSDIIGMAYGSLFDATLTEVTDLKDGGQLVKTAAWYDNEMSFTAQLIRTLEYFAK IAK" gene complement(554872..555507) /gene="def" /locus_tag="L154885" /db_xref="GeneID:1114179" CDS complement(554872..555507) /gene="def" /locus_tag="L154885" /EC_number="3.5.1.88" /note="cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+)" /codon_start=1 /transl_table=11 /product="peptide deformylase" /protein_id="NP_266716.1" /db_xref="GI:15672542" /db_xref="GeneID:1114179" /translation="MNRDEIQANLIKASHMISMDDIIREGYPTLREVANDVTLPLSDE DIILGEKMLQFLHNSQDPVMAEKMGLRGGVGLAANQLGLLKKVIAVLIPNEPEVDEDG NEIPPKEAYKMREIMYNAKVVSHSVQDAAVEGGEGCLSVDREVPGYVVRHARVTVEYY NKEGEKKKIRLKDFPAICVQHEIDHTNGVMFYDHINMNDPWEIKDGMIIVK" gene 555661..556116 /gene="yffD" /locus_tag="L155602" /db_xref="GeneID:1114180" CDS 555661..556116 /gene="yffD" /locus_tag="L155602" /function="RNA synthesis, modification, and DNA transcription" /note="hydrolyzes diadenosine polyphosphate" /codon_start=1 /transl_table=11 /product="dinucleoside polyphosphate hydrolase" /protein_id="NP_266717.1" /db_xref="GI:15672543" /db_xref="GeneID:1114180" /translation="MKEYRQNVAAIILNKENKIWLGKRADGMSWGFPQGGIEAGEKPE TAIIRELSEEIGTKEFEIIGQYPGTLKYDFPKEMKFPTWTYAGQEQHYFLVRLHEEAK INLESHPEEIEFSTYQFLGLSEIRKMDFGFKNDVYHQALDYFSKIIEKN" gene 556127..558205 /gene="uvrB" /locus_tag="L0257" /db_xref="GeneID:1114181" CDS 556127..558205 /gene="uvrB" /locus_tag="L0257" /note="The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion" /codon_start=1 /transl_table=11 /product="excinuclease ABC subunit B" /protein_id="NP_266718.1" /db_xref="GI:15672544" /db_xref="GeneID:1114181" /translation="MAIERITDNKFELVSKYEPAGDQGEAIAELVDNIENGEKAQILR GATGTGKTYTMSQVIARTGKPTLVMAHNKTLAGQLYSEFKEFFPNNAVEYFVSYYDYY QPEAYVPSSDTYIEKDSSVNDEIDKLRHSATSSLLERNDVIVVASVSCIYGLGSPKEY QDSVVSLRPGQEISRDQLLNDLVGIQFERNDIDFQRGCFRVRGDVVEVFPASRDEHAF RVEFFGDEIDRIREIEVLTGQVLGEVDHLAIFPATHFMTNDDRMEESIAKIEAELEEQ LKVFRSEGKLLEAQRLEQRTNYDIEMLREMGYCNGVENYSRHMDGREEGEPPYTLLDF FPDDFMIMIDESHMTMGQVKGMYNGDRARKEMLCNYGFRLPSALDNRPLKREEFESHV HQIVYVSATPGDYEMEQTDTIVEQIIRPTGLLDPVVEVRPMMGQIDDLVGEIHKRAEK NERVFVTTLTKKMSEDLTAYFKEMGIKVKYMHSDIKTLERTEIIRDLRLGVFDVLVGI NLLREGIDVPEVSLVAILDADKEGFLRNERGLIQTIGRAARNSEGHVILYSDMAKALD ENDPVDKEILDSGYYTEYEGQKYKITRSMKHAMDETARRREIQMAYNEEHGITPQTIK KEIRDLIAITKKTDSGEIEEVDASAMTKKERKALVKKLEKEMQQAASALDFEGAAQLR DMVLELRAMD" gene 558401..559210 /gene="gltS" /locus_tag="L158343" /db_xref="GeneID:1114182" CDS 558401..559210 /gene="gltS" /locus_tag="L158343" /note="transport and binding protein; amino acids, peptides and amines" /codon_start=1 /transl_table=11 /product="glutamate or arginine ABC transporter substrate binding protein" /protein_id="NP_266719.1" /db_xref="GI:15672545" /db_xref="GeneID:1114182" /translation="MKKLALGMVGLAAVATLAACGNGKSATNQVDKVKKAGVLKVALS PDYPPFEFQIIKDGKNTVVGSDVDLANAIGKKLGVKVKIESMDFNNVLASLNTGKADI AISGISKEPSREKSVNFSDVYYTASNYLVVKKSDLSKYRSVDDFKGKKVAAQKGSTQE GIVTSQFKGATEIALPQIGDEINEVKGGQVQGAVIENLIAKSYVAANSDLAIANVDVK TPKDSYGSAVALPKGSDELTKVVNSVIKEELKNGQINKDIQKNYTLSENNK" gene 559225..560343 /gene="argE" /locus_tag="L0115" /db_xref="GeneID:1114183" CDS 559225..560343 /gene="argE" /locus_tag="L0115" /EC_number="3.5.1.16" /note="glutamate family; fifth step in arginine biosynthesis" /codon_start=1 /transl_table=11 /product="acetylornithine deacetylase" /protein_id="NP_266720.1" /db_xref="GI:15672546" /db_xref="GeneID:1114183" /translation="MEKAVDLLKSLVNIPSSSGNEEEILIFLEKWFIEKQFDFVIRKE TFVAGQIKAKGKKEPKKEAIILTGHVDTVVSGHLADWKFSPTDARVEEGKLFGLGASD MKGGDVGNLLAAASFIGKDLSQDIWVVGTANEELDGKGSEDFARYFSENWSYDSACCI IAEPTDLEKIYIGQRGNHFMKLHFSGKAGHASVQEHFQQSALGAVTYFLENIEQIVED LKIYKNSQLGLPTFVVTSILSGDENSPNKTADFAELVVDCRLTPELEEVFEQVMSELA VQYHFTHEDIVTPVLSTLTDNQAPFIQLLTNLSGAKTTAASGSNEQGFFENVGIRTVV FGPGQHEQCHIANESIILEKLEEHIEILQSFIKKMQES" gene complement(560411..560866) /gene="fabZ1" /locus_tag="L160425" /db_xref="GeneID:1114184" CDS complement(560411..560866) /gene="fabZ1" /locus_tag="L160425" /note="fatty acid and phospholipid metabolism" /codon_start=1 /transl_table=11 /product="hydroxymyristoyl-acyl carrier protein dehydratase" /protein_id="NP_266721.1" /db_xref="GI:15672547" /db_xref="GeneID:1114184" /translation="MTKKYAMTATEVMEVIPNRYPIMFIDYVDEISENKIVATKNVTI NEEVFNGHFPGNPTFPGVLILESLAQAGSILILKKEEFQGKMAYIGGIDKAKFRQKVT PGDVMKLEFEITKFRGKVGTADAAAYVDGKKVTTCQFTFIVDEAAEQTN" gene 561142..561894 /gene="fabI" /locus_tag="L161132" /db_xref="GeneID:1114185" CDS 561142..561894 /gene="fabI" /locus_tag="L161132" /EC_number="1.3.1.10" /note="Catalyzes a key regulatory step in fatty acid biosynthesis" /codon_start=1 /transl_table=11 /product="enoyl-(acyl carrier protein) reductase" /protein_id="NP_266722.1" /db_xref="GI:15672548" /db_xref="GeneID:1114185" /translation="MFLEGKKIVIMGVANNKSIAWGCAKAMKDQGATLIYTYQNERME KQLAKLAEPEDLLIECDVTSDESIRRAFGTIEARVGKIDGLVHAIAYSKKEELGGNVT DISRDGYALAQDISAYSLLAVAKAAKPLLKKGSGIVTLTYMGSVRAIPNYNVMGIAKA ALESTVRYLAAEMAHVGVHVNGISAGAIKTLAVSGVSGYKDLIKESDSRTADGVGVTI DDVGQTAAFLVSPLASGVIGDIVYVDKGVHLT" gene 562156..562563 /gene="yfgC" /locus_tag="L162152" /db_xref="GeneID:1114186" CDS 562156..562563 /gene="yfgC" /locus_tag="L162152" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266723.1" /db_xref="GI:15672549" /db_xref="GeneID:1114186" /translation="MKLMKKTLVTLAVTLGISGALSPAVNAATKTTNASISVLNIITM ADRVYFQYNGKAISTATAFQSAHSFTPTNWVTQNGISLINKNGSWGRIYQGKYTVGSG INAGKFGHVGVSFNKYIRTTILGNGQWTYSTFN" gene 562632..563272 /gene="yfgE" /locus_tag="L200021" /note="ABC transporter ATP-binding and permease; transport and binding protein; may contain a frameshift mutation" /db_xref="GeneID:1114187" gene 563253..564173 /gene="yfgF" /locus_tag="L163255" /db_xref="GeneID:1114188" CDS 563253..564173 /gene="yfgF" /locus_tag="L163255" /note="transport and binding protein" /codon_start=1 /transl_table=11 /product="ABC transporter permease protein" /protein_id="NP_266724.1" /db_xref="GI:15672550" /db_xref="GeneID:1114188" /translation="MKVTLIKELFYLTKSKIYLVISGIIIGLLILGTFQASLNLKGAE SLFVEDKQSDINFQKNIHKDYSISNNGNQSILNNATRYDYEQLNQANQAISFVGFPQF IFKSYGMTIISLLAGFFGVLVANYDYKFGTFKRRLGQQSWKIILLGKSVGLVVSLIVM YLLIFSLAACSGEILHLFFKSENAGEYGQSLYPLINSDSFYLLFFSFMIGLALAMMCF ALTLASKRANLIGSAFMIYLFILPNTGCFDWSNMTLNIFAPFGNHLGVPPLSMTQISP LFILVLFVTYLLIILTGGMLIFFKHTRYNI" gene complement(564298..565221) /gene="yfgG" /locus_tag="L164312" /db_xref="GeneID:1114189" CDS complement(564298..565221) /gene="yfgG" /locus_tag="L164312" /note="involved in biogenesis of membrane proteins; Firmicutes specific proteins are shorter than other bacterial counterparts and have a signal peptide and lipid attachment site" /codon_start=1 /transl_table=11 /product="OxaA-like protein precursor" /protein_id="NP_266725.1" /db_xref="GI:15672551" /db_xref="GeneID:1114189" /translation="MTAGLLFLSGCVQTHVVDGVRVPTEAATHGITYNFLVRPMSAFV DLFANNLHMGYGWGIIFVTLIIRFLILPLGLNQAYKSTYMQEKMAYLAPVFAPLQERL KKAQTPEEKMAAQQALMAAQKDNGINMLSSIGCLPMLIQWPFFIALYNAAAYTTGISS STFYGIPLGHPSVVLVIISGVLYFIQTWISTLSMTPEQKKSGMAMLIMSPAMIVVFSF MSPAGVALYWAVGGFVIVIQQIIITFIMKPRMRRRIDEEFTKNPPKINNEGLKDVTPT SVQENFKEITSERNEKERKSGGRNAGKQNRK" gene complement(565435..566193) /gene="yfgH" /locus_tag="L165449" /db_xref="GeneID:1114190" CDS complement(565435..566193) /gene="yfgH" /locus_tag="L165449" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266726.1" /db_xref="GI:15672552" /db_xref="GeneID:1114190" /translation="MKKILSFDIDNTLNEPKMPIFPEMAELLATLSQKYIIAPISGQK YDQFLIQIINNLPESANLDNFHLFVAQGTQYYAHKDGEWKQVFNYALTDEQANAIMGA LEKAAKELGHWDESVLAPGDEINENRESMIAYSAIGQKAGVEAKQAWDPDMTKRNEIA KLASQYAPEFEFEVAGTTTINGFVPGQNKEFGMNHLMEELNVTKEEILYFGDMTQPGG NDYPVVQMGIETITVRDWKETAAILKAIIAMEEA" gene complement(566288..566878) /gene="yfgL" /locus_tag="L166479" /db_xref="GeneID:1114191" CDS complement(566288..566878) /gene="yfgL" /locus_tag="L166479" /note="similar to several membrane proteins" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266727.1" /db_xref="GI:15672553" /db_xref="GeneID:1114191" /translation="MKKSKASDVAILSIFIAIMVVVQLLSQIIYSVWPLPIVPTLLHI PVIIGSIVLGVRKGAFLGLVMGLISVINSTIVTLPSSFMFSPLQPVPGTNHGSIWALV IAIVPRVLVGILPALVYRLAQNRFGAGLAAFVGTATNTLLVLSFIFLFFHDVTKQTFG ALLASIITGNSIAEVIIAVILTMAIVPALSKARGNS" gene complement(566895..567431) /gene="dfpA" /locus_tag="L166912" /db_xref="GeneID:1114192" CDS complement(566895..567431) /gene="dfpA" /locus_tag="L166912" /EC_number="4.1.1.36" /note="decarboxylates 4-phosphopantothenoylcysteine to form 4'-phosphopantotheine." /codon_start=1 /transl_table=11 /product="phosphopantothenoylcysteine decarboxylase" /protein_id="NP_266728.1" /db_xref="GI:15672554" /db_xref="GeneID:1114192" /translation="MTKITLAVTGSIAAYKAADLTSLLTKEGHDVTVLMTKSATQFIT PLTLQVLSKNKVHLDIMDEERPELVNHIDLAKNTELFLVAPATADTISRLAQGRADDI VTSVALALEPSVPKYFAPAMNTKMYQHPLTQKNIEILKKIDYNMIQPKKSLLACGDFG EGALADLPDILSDLKNSL" gene complement(567424..568119) /gene="dfpB" /locus_tag="L167675" /db_xref="GeneID:1114193" CDS complement(567424..568119) /gene="dfpB" /locus_tag="L167675" /note="biosynthesis of cofactors; prosthetic groups, and carriers; apparently the middle part of the protein; probably involved in pantothenate metabolism" /codon_start=1 /transl_table=11 /product="phosphopantothenate--cysteine ligase" /protein_id="NP_266729.1" /db_xref="GI:15672555" /db_xref="GeneID:1114193" /translation="MKVLITSGGTTEPIDNVRGISNFATGSLGKVTAENFLNAGHEVY LLAGLQAKLPEFTDRLTYIPIEGTHDLYEQMKNLVPDMDVVIHSMAVSDYRPIYMTGL ENFTDKFSKEELLNFRPEKVGKISSKSDYQIMLLEKTPKIISYIKEWNPNVLLFGFKL LVGVEKSELLSVAREKLLTNHADFILANDLENIHGNDHQAFLVSKNHEITLKTKAEIA DRLLKTSEELKND" gene complement(568265..568450) /gene="xylH" /locus_tag="L168282" /db_xref="GeneID:1114194" CDS complement(568265..568450) /gene="xylH" /locus_tag="L168282" /note="central intermediary metabolism" /codon_start=1 /transl_table=11 /product="4-oxalocrotonate tautomerase" /protein_id="NP_266730.1" /db_xref="GI:15672556" /db_xref="GeneID:1114194" /translation="MPYVHVELFEGRTVEQKAIIAKEITESISKHAGAPTSAIHVIFN DLPEGMLYQGGEMKKKK" gene 568648..570975 /gene="yfgQ" /locus_tag="L168650" /db_xref="GeneID:1114195" CDS 568648..570975 /gene="yfgQ" /locus_tag="L168650" /note="transort and binding protein, cations" /codon_start=1 /transl_table=11 /product="cation-transporting ATPase" /protein_id="NP_266731.1" /db_xref="GI:15672557" /db_xref="GeneID:1114195" /translation="MSLKGLTSFEVEERIRQGKINKNIDETDRPVWEIVKRNTFTFFN LIFAVIAILISLVQAWNQLIFLPIIVINTIVGIYQEIKAKRYLDQMTLLHAPQSTVIR NGQQEKIASDDLVEEDIIILKTGNQIVADARIVEGSIFVNESLLTGEADEIEKNVDNK LLSGSFVVSGEAKVILEKVGKDSYISKLTEQAKLVDHGEDSEMLRALNKLLKWVSFII LPIAVILFTQNYFVNHNTLQTSVVAMVAAVIGMIPEGLYLLTTIALTLSSVKLARNQV LLHNMKSIESLARVDVLCVDKTGTITEPRMSVEQVFVSPSSNISEAKFMSLLSDYISA NTDDNDTMKAIREFMLAKGDLQNKMTGVKKIIPFSSKVKYSAVCFENESYLLGAPEIV LGKTYEKVSSEINHLLEEGFRVLVLAGTKEKIYDQLNLGAYALGYVVLANPIRENAKS TFNYFAEQGVNIKVISGDNPQTVSAVAKRAGITGAERFIDANLLKTKEDLDQAVESYT VFGRVTPDQKRRLVQALKRKDHTVAMTGDGVNDILAMKSADCSIAMASGSDAATQVAQ VVLLDSDFGHMTQVVTEGRRVVNNVQRSAILFLVKNLFSIILAIISAIFVFTYPLQAS QLSLISLFTIGIPGFLLSLEENDKRIEKDFIKNVILKALPASLTEITAVLGVVIAGAA FKLTASEISTSAVILLAVVGFMILTKISAPLNRFKMGIIIFNIVGIIISGFMFNSLFS ISKISLDSFVLVALLSLFSESLFRNFDSLLKKFFK" gene 570988..571431 /gene="yfhA" /locus_tag="L170990" /db_xref="GeneID:1114196" CDS 570988..571431 /gene="yfhA" /locus_tag="L170990" /note="paralogous to yafE" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266732.1" /db_xref="GI:15672558" /db_xref="GeneID:1114196" /translation="MKEINKDMRNKELIEELISLWENSVKETHSFLSVKEIEDIKQYV PQALKAIEHLIVEFDDNEKPIAFMGIVGEKLEMLFISPNRMKKGLGRKLLEEAIKNYS VNELVVNEQNPQAKGFYEHLGFKVYKRNPIDEQGNQYPILFMHLG" gene 571538..572470 /gene="yfhB" /locus_tag="L171552" /db_xref="GeneID:1114197" CDS 571538..572470 /gene="yfhB" /locus_tag="L171552" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266733.1" /db_xref="GI:15672559" /db_xref="GeneID:1114197" /translation="MAFLIISLIIMLIGLLRLKINKRSIIGGIFLASGLILSLASLFF ELLNLIYLYLPSGDFATLIIAYGILPLIFLLVCGYFIFNSKTMRTKEGKSATAKLSAL FGLNLLIAFPALFMLFTFSTKTIPQIIWYILLYILLIDIILCFLFAAYILYSWMSQMI PLQKKIDYIIILGSGVRSEEVPPLLKSRLDKGIEYYQKNPTAKFVVSGGQGADEPVSE AFAMRKYLHSQNIPNHQILFEDKFTTTYENMLFSKRIINEDWSDKEMPPSIIFSTNNY HVLRGSLYAQRVKLKAQGVGGTHSTLFLTYGLNS" gene 572714..573307 /gene="yfhC" /locus_tag="L172704" /db_xref="GeneID:1114198" CDS 572714..573307 /gene="yfhC" /locus_tag="L172704" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266734.1" /db_xref="GI:15672560" /db_xref="GeneID:1114198" /translation="MKKILIALIIIVPIAITGFLGYDFFKKNFAHVHGIIMYSDNKDE ADTILENNKKYIDKSLTVEGKYSSKSDVLVLNTQAANKLINEKVFNNVTKKGDKFKFK TVENLSAEPALWTGKEDKTITDDKGQSVKPKSTKYIVLGEYSATSKLLILNDEDYQKF DAKAKFVSVIKEKRDADKVLKSYITSGSIPSQIFPYK" gene 573505..573987 /gene="crtK" /locus_tag="L173469" /db_xref="GeneID:1114199" CDS 573505..573987 /gene="crtK" /locus_tag="L173469" /codon_start=1 /transl_table=11 /product="carotenoid biosynthetic protein CrtK" /protein_id="NP_266735.1" /db_xref="GI:15672561" /db_xref="GeneID:1114199" /translation="MTSKKLKALGQLILFIVGIELIGGLSGLLAGDIKGIYNNLKLPP LAPPDYLFGIVWPVLYALIAISAYLIFYKLKTQRSEGQNALFYFGIQLILNFIWSIIF FKGYFWLGVIIILLLDFIVYLCIIKFSKINKWSAFLLIPYFIWIIFATYLSISVAILN" gene 574106..574507 /gene="yfhF" /locus_tag="L174076" /db_xref="GeneID:1114200" CDS 574106..574507 /gene="yfhF" /locus_tag="L174076" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266736.1" /db_xref="GI:15672562" /db_xref="GeneID:1114200" /translation="MNFIKPFIISGVIFLILDICWLFFANKKIYQPNIGNLMGDFKVI PAIIFYIIYLGALTFFVLMPGLEKNSITYVLLSGALLGLVCYSTYDLTNLASIKDWSL MVTIIDIIWGTFVSSLSASLSFLVITKFMEG" gene 574511..576307 /gene="yfhG" /locus_tag="L174523" /db_xref="GeneID:1114201" CDS 574511..576307 /gene="yfhG" /locus_tag="L174523" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266737.1" /db_xref="GI:15672563" /db_xref="GeneID:1114201" /translation="MEKVKSEDRLLESIIAGAQKVINGKDELNKINVFPVADGDTGSN LASLMQTIIDNLSNNNYSTNLLFDEVASAALIGARGNSGIIFAQYLNAVSDYYSVYET NLEILVLAFNRAVKSAYDSLIEPKEGTILSVMKRWAEVLLITFKESTSFEKALLEAKG EAWKALKETQFQMSILKKNKLVDSGAKGFYYFISGFTDAYCGEKVSKIQEGLIPSIKE LNTEDIKEHFISEAPKNRYCSEFIIKEPLKQEKDLKESLRRWGDSLVIAGNKKQIKIH IHTNHPENILALLEKTGTIIYQKVDDMQLQYEISQNRKSSIAIVTDSVADLSADFILE NQIFVLPLNVSVGEQAFLDKLTINPQIFSEKYNKNLKMTTSQPSIQSVDSLFSFLEGK YEHIIVISVSSKLSGTYQLLNQRITAKKSLENRVHLIDSKLNSVAQGLLVKQVAKLIS EERSIESVLNETEKITDRIFIYVVVEDLSPMINSGRIPKILGETAQKLSMHPIISLDK RGNGKLIGASFSQNKSMDKILKKINLLSKEGQIEELALTHVLSEESALKINELLKEKT TKNCEIIDSSAAIGISAGIGSLAIAGLLKEVK" gene 576304..577077 /gene="yfhH" /locus_tag="L176238" /db_xref="GeneID:1114202" CDS 576304..577077 /gene="yfhH" /locus_tag="L176238" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266738.1" /db_xref="GI:15672564" /db_xref="GeneID:1114202" /translation="MNYIAVLVTLLLYFICWFLIATSKKNYGLIDIAWGGGFVLTAVV SYLFSPRITIQNSLILVLVILWGVRLAIHLGRRNWNKPEDYRYTNMRKRWGNNFPKLK AFLTVFMVQYLLLIIISLPIIQVNSNVNSQFYWWQILGIIIWIFGFIFEVFGDRQLEV FKKLPQNKGKLLTSGLWSLTRHPNYFGESMCWWGIFLISLTTLSTLWLVISPLLITSL LLFVSGVPILEKKYKNREDFKEYAKTTPKFVPFIGKKGL" gene 577224..577586 /gene="yfhI" /locus_tag="L177221" /db_xref="GeneID:1114203" CDS 577224..577586 /gene="yfhI" /locus_tag="L177221" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266739.1" /db_xref="GI:15672565" /db_xref="GeneID:1114203" /translation="MKKVLVGLLAIMVMIIASGYTYYKMNYGGESYYVQILVNGEREE TTADDHTPMVIYHYKLDSFNSKGDKKLVKFMASHNLRNQAYLELTYNKHKGVTNWNEV QEKEIPKPALKELQSLEN" gene 577706..578074 /gene="yfhJ" /locus_tag="L177700" /db_xref="GeneID:1114204" CDS 577706..578074 /gene="yfhJ" /locus_tag="L177700" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266740.1" /db_xref="GI:15672566" /db_xref="GeneID:1114204" /translation="MAFNICVNLYVKEVEKEVDFFRSIGFLEIERHKMENSDSVVISP LSDGNAFLQIWDIEFIKKVSPEVANDKPSLLFTVYNIEEMNEKLKKITPTTSDLMDAN GKKAFNFQSPSGNYYAFMEI" gene 578303..578587 /gene="yfhK" /locus_tag="L178303" /db_xref="GeneID:1114205" CDS 578303..578587 /gene="yfhK" /locus_tag="L178303" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266741.1" /db_xref="GI:15672567" /db_xref="GeneID:1114205" /translation="MIIVNAKFYIKEDKKSQFLKEIEGLISASKKDEGCLEYSLYEST DNQLEFVMIENWESQEAIEKHNTNPLLLAFAKNLSTYSSKKPVLQIAETK" gene complement(578890..579588) /gene="yfhL" /locus_tag="L178908" /db_xref="GeneID:1114206" CDS complement(578890..579588) /gene="yfhL" /locus_tag="L178908" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266742.1" /db_xref="GI:15672568" /db_xref="GeneID:1114206" /translation="MEYQLSSTSMAPLVEISLDNNEEIQIESGAMVYHNAAVKLEGKM NSNGKGGLRGALKALGRSITSGESFFITKASAIGANGKISLAPASLGSIKEILVGKEQ WNLNTGAFLVSEGGVHYIMERQKLDGALFGGTGGLFVMKTQGSGKMLISGYGDIVEIA LDGTEDFVVDNQHVLAWTESLSYSIEVASGTFGFKTGEGLVNKFRGKGKILIQSRNVE ALAQSIIPFIPSKG" gene complement(579746..580126) /gene="yfiA" /locus_tag="L179764" /db_xref="GeneID:1114207" CDS complement(579746..580126) /gene="yfiA" /locus_tag="L179764" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266743.1" /db_xref="GI:15672569" /db_xref="GeneID:1114207" /translation="MQQVKIRRIKMSVDRSYSSYEVIRAYQDRGMMKWGSFATGELTE AQNAFVKEQNSDKILQPLSHHIILHLLNQSFTNQVQVKIKYQSKVKITEVFGFVSEFI NNQVRIKSTDKIHLISIEKIINIS" gene complement(580086..581552) /gene="umuC" /locus_tag="L180104" /db_xref="GeneID:1114208" CDS complement(580086..581552) /gene="umuC" /locus_tag="L180104" /function="SOS responce" /experiment="experimental evidence, no additional details recorded" /note="DNA replication, restriction, modification, recombination, and repair; evidence experimental PMID:9097419; involved in UV protection and mutagenesis; may modify DNA replication machinery to allow bypass through a damaged template" /codon_start=1 /transl_table=11 /product="UmuC" /protein_id="NP_266744.1" /db_xref="GI:15672570" /db_xref="GeneID:1114208" /translation="MDKHKLNNFFDYSLEPRRAILFEDVKSNYASIECVQRNLNPLTT SLCVMSRADNTKGLTLASSPTFKKVFGMKNISRASDLPFIIETRKFNFPQWYRTHTDI YGQRTEPTLQHVAFIESWAKRTWLVPPQMQLYVDYKIKVTEILTNYTSIEEIHSYSID ESFLDITESLNFFYPDIRNRYEQMNLITLDLQREILDKLGLYVTVGMGDNPLLAKLAM DNYAKHNQNMRALIRYEDVPSKLWTLPKMTDFWGIGKRTEKRLNKLGISSIKELTNAD PLLLKQKLGTIGLQHFFHANGIDESNVREKYIPKSSSFSNSQILPRDYHKQKEIELVI KEMAENLAIGLRKGGRMASNLSLYVGAAASSEHSSIKISRNIEATQNTKELQDLAILL FREKYQGGAVRQIGISGNQLSDNSVKQLSLFETVEENQFNEKQESLQKAIDEIREKFD FLSIQKASSLSEGSRVIYRNKLIGGHAASQNKEDKDVS" gene complement(582008..582541) /gene="yfiC" /locus_tag="L182026" /db_xref="GeneID:1114209" CDS complement(582008..582541) /gene="yfiC" /locus_tag="L182026" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266745.1" /db_xref="GI:15672571" /db_xref="GeneID:1114209" /translation="MKYFVRLATEQDKPAVAKFYDNSLPLIDEKQTSWIKNIYPSIDT ALKAIDLSQLFVCYDSNDIVSGTVILNNQSDKEYENITWSTPELDPNQILIIHTLVID PKKLNQGIASAMINFIKDFGKSNSMVTIRLDTNFKNTPAQKLYEKHQFVFRGRTNLKS FDNKGWDDCVFYEFCLK" gene 582842..583351 /gene="yfiD" /locus_tag="L182797" /db_xref="GeneID:1114210" CDS 582842..583351 /gene="yfiD" /locus_tag="L182797" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266746.1" /db_xref="GI:15672572" /db_xref="GeneID:1114210" /translation="MKIKKIIIAATTFAIVFSTCIGIKSLADNYWTGHGEIQTINNNI DTLSNRVKSKNQVISDLNQTIANLKSSVDSQSSQVNSLQTQLTQANVDKQNEINAKIN EINTKIAEGNQKVADKQKEVDTANQTISQLNQQLNDLRQKSGQDNDQALREVQDTRAK SDQAVKDAQ" gene complement(583404..583835) /gene="rmaJ" /locus_tag="L583407" /db_xref="GeneID:1114211" CDS complement(583404..583835) /gene="rmaJ" /locus_tag="L583407" /note="MarR-family regulators" /codon_start=1 /transl_table=11 /product="transcription regulator" /protein_id="NP_266747.1" /db_xref="GI:15672573" /db_xref="GeneID:1114211" /translation="MTDNILSKELCFQLYIASKEIIKKYNSYLNRYSLTYTGFIAMLA IENKMTINKLGEELSLDSGTLSPLLKRLEAKGYIVRKRSDKDERSVELFLTDKGAQVK KELPSISLEIGDSLVSCNENINYDLLLSQLLTLNKSLKTEI" gene 583936..584349 /gene="yfiE" /locus_tag="L183902" /db_xref="GeneID:1114212" CDS 583936..584349 /gene="yfiE" /locus_tag="L183902" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266748.1" /db_xref="GI:15672574" /db_xref="GeneID:1114212" /translation="MKKIFSTKMINIGGRNGEVHSPDKSFNLDIVAPGRKVEGATNPE QLFAAGYSACFNSALDYIKKSKNIEGESTIEVTVSLYNLSQNEIPDVVLGVDITGHIE GVGTEETEELLKLTHKTCPYSRATQGNIEVTIKAI" gene 584876..585445 /gene="yfiG" /locus_tag="L184871" /db_xref="GeneID:1114213" CDS 584876..585445 /gene="yfiG" /locus_tag="L184871" /EC_number="2.7.1.21" /note="catalyzes the formation of thymidine 5'-phosphate from thymidine" /codon_start=1 /transl_table=11 /product="thymidine kinase" /protein_id="NP_266749.1" /db_xref="GI:15672575" /db_xref="GeneID:1114213" /translation="MAQLYFKYGTMNSGKSIEILKVAHNYEEQGKPVLLMTSSLDTRA GVGTVASRIGMKAEAVAIDEEMSVFDYVNSLPAKPFCVLIDEAQFLNKKHVYDFARVV DELNVPVMAFGLKNDFRNELFEGSKYLLLLADKIEEIKTICWYCSKKATMVIRTIDGK PVYEGEQLQIGGNETYIPVCRKHYFKPEI" gene 585501..585944 /gene="yfiH" /locus_tag="L185472" /db_xref="GeneID:1114214" CDS 585501..585944 /gene="yfiH" /locus_tag="L185472" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266750.1" /db_xref="GI:15672576" /db_xref="GeneID:1114214" /translation="MFYHFKGTITGEDYQRILGQMTKRMMLVFSGIMLIFLVINLFMS KGQWLWPVVSALLVLVLGNLFLHWQLKSRFLKNFKPQELDMYVTEEQIKAQMNVRNVE IFSDRVHFFQGRNQVMIFKKDMLQDLTQWDSFVNMAKNLPLQTKK" gene 585962..587035 /gene="prfA" /locus_tag="L0373" /db_xref="GeneID:1114215" CDS 585962..587035 /gene="prfA" /locus_tag="L0373" /note="recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2" /codon_start=1 /transl_table=11 /product="peptide chain release factor 1" /protein_id="NP_266751.1" /db_xref="GI:15672577" /db_xref="GeneID:1114215" /translation="MFDQLESIVGRYEELGELLSDPEVVSDTKRFMELSREEADLRDK VATYNEYKKVLETISDSEEMLGEGGLDDDMKEMLKEELSSAKSQKELLEEEIKILLLP KDPNDGKNIILEIRGAAGGDEAALFAGDLLNMYQHFSESQGWKFEIMEANITGIGGYK EVSALISGPSVYSKLKYESGAHRVQRVPVTETQGRVHTSTATVLVMPEVEEFEMTIDQ KDLRVDIYHASGAGGQNVNKVATAVRMVHLPTGIKVEMQEERTQQKNRDKAIKLLNTK VFDYYQQIELDKQNAERKSTVGTGDRSERIRTYNFPQNRVTDHRIGLTLQKLDSILSG KMDEVIDALIVYDQTKKLEELNK" gene 587035..587562 /gene="yfiI" /locus_tag="L187045" /db_xref="GeneID:1114216" CDS 587035..587562 /gene="yfiI" /locus_tag="L187045" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266752.1" /db_xref="GI:15672578" /db_xref="GeneID:1114216" /translation="MDFEFEGFVIREVGHENRKMQTSKKVNNVSTDVTIFKVKGFDLS FDLLYCRGENGDVWVVAEKIESLSKHLHRAQRTRMSIENYKEKQYCRLWQEVKKDEDW SRTKKSLPLSELGKYSKNPLRQSFSELGAKLGTLEELVSETNQNRKQYALLFPAQEVK IPLCAYLLTRISPLI" gene 587730..588380 /gene="yfiJ" /locus_tag="L187716" /db_xref="GeneID:1114217" CDS 587730..588380 /gene="yfiJ" /locus_tag="L187716" /note="electron transport" /codon_start=1 /transl_table=11 /product="NADPH-flavin oxidoreductase" /protein_id="NP_266753.1" /db_xref="GI:15672579" /db_xref="GeneID:1114217" /translation="MIKAAQSGASSNFLQAYSIIEIADNDLRRELAKISGSDDYVNQT GVFYIFVADWYRQAQILQTENKDVKALQNMEALTVAIVDTTIAAQNMAIAAESMGLGI CYIGGIRNDIDKVADLLDLPELTVPLFGLTIGMPKTRNEVKPRLPRANILSVNAYNRV TVSDLQAYNEQTSDYYANRSHHQKSTDWTQEMSNFLTKPRREDVAKFLKKQGFTLN" gene 588486..589298 /gene="hemK" /locus_tag="L188472" /db_xref="GeneID:1114218" CDS 588486..589298 /gene="hemK" /locus_tag="L188472" /EC_number="1.3.3.4" /note="heme and porphyrin; may be involved in the oxidation of protoporphyrinogen into protoporphyrin IX" /codon_start=1 /transl_table=11 /product="protoporphyrinogen oxidase" /protein_id="NP_266754.1" /db_xref="GI:15672580" /db_xref="GeneID:1114218" /translation="MLWIEAVRTLSADLEDPFELEFVWRNLHELNKLSWLNLMREKIT DQELKLLTEVSKRLHQNEPPQYIVGWAEFRDLKLKVDERVLIPRPETEELVEMILAEN EKDSLKILDIGTGSGAIAISLAQARENWSVKASDISKEALTLAAENAEINQANLEFIQ SDVLDKITDSFDIIVSNPPYIAFDETYEMDNSVIKYEPDLALFAENQGLAIYQKIADQ AVNHLTDNGKIYLEIGYKQGQAVQAIFQEKFTDKLVSIHQDIFGKDRMISVK" gene 589332..589796 /gene="yfiL" /locus_tag="L189315" /db_xref="GeneID:1114219" CDS 589332..589796 /gene="yfiL" /locus_tag="L189315" /note="probably an acetyltransferase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266755.1" /db_xref="GI:15672581" /db_xref="GeneID:1114219" /translation="MNSLIFEQVFQQKEDFLPILLLADDGPHLENYLENGDLFTLSLK NGKTVACAVVIKKQKNTFEIENFAVETSFQGQGFGQQMMKQLITYLKENLAADELILG TDDVSNNVAFYEKCGFTITHKISNYFLDNCDHPIFEGKVQLKDKIYLRKKLK" gene 589901..590713 /gene="yfjA" /locus_tag="L189883" /db_xref="GeneID:1114220" CDS 589901..590713 /gene="yfjA" /locus_tag="L189883" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266756.1" /db_xref="GI:15672582" /db_xref="GeneID:1114220" /translation="MKFVQGGLNNFANELEKVEGGFYGIIGLLFRRPYKVPDDLKNIR ENLFIEAKTLQKELDKQSEKENNNKNRLSARAIKALKSGQLAILPTETVYGLFADAMN EEAVQKLYSVKGRPTERALNMNISSFEDILKYSINQPVYLQKIVEAFLPGPLTIILEA SKDVPEWIHIGKSTVGFRMPNIAVTQKIIKEVGVLVGPSANLSGSKSPSFFADLSPEI LENAAVAVQDDSIYGLDTTIIDLTQEKPKLLRQGAVTKEELLKKVPELGQIE" gene 590943..592190 /gene="glyA" /locus_tag="L0082" /db_xref="GeneID:1114221" CDS 590943..592190 /gene="glyA" /locus_tag="L0082" /EC_number="2.1.2.1" /note="catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate" /codon_start=1 /transl_table=11 /product="serine hydroxymethyltransferase" /protein_id="NP_266757.1" /db_xref="GI:15672583" /db_xref="GeneID:1114221" /translation="MIFDKEDFESFDPELWAAIHAEEIRQQQNIELIASENIVSKAVM AAQGSVLTNKYAEGYPGKRYYGGTEAVDVVENLAIERAKELFGAKFANVQPHSGSQAN AAAYMALIQPGDTVLGMDLNAGGHLTHGASVNFSGKTYHFVPYGVNSETELLDYDEIL KIAKQVQPKLIVAGASAYSRLIDFAKFREIADSVGAKLMVDMAHIAGLVATGAHPNPL PYADVVTTTTHKTLRGPRGGMILTNDEALAKKINSAIFPGTQGGPLEHVIAAKAVAFK EALDPEFTTYIEQVIKNTQAMAEEFAKVEGLRLIAGGSDNHLLNLKVLDLGINGKEAQ DLLDSVHITLNKEAIPDETLSPFKTSGVRIGAAAITSRGFKEVEAKKVAQLVSEALVN HDNQEKLAEVRKAALELTRQFPL" gene 592351..592953 /gene="yfjB" /locus_tag="L192354" /db_xref="GeneID:1114222" CDS 592351..592953 /gene="yfjB" /locus_tag="L192354" /note="transposon related function; similar to Orf14 of Enterococcus faecalis transposon Tn916" /codon_start=1 /transl_table=11 /product="transposon-related protein" /protein_id="NP_266758.1" /db_xref="GI:15672584" /db_xref="GeneID:1114222" /translation="MFKKLIGLIVLILLVFSGFYVYRMHENVKDVMSYEAEVEKSLKA QGLSGDTKLALAIIYTETKGKQVDIMQSSESLNGTTNTFSTEQESIKQGISNLSKVLE YASQKKVDAWAGVQAYNYGKAYVDYIAAHGGKNTIALSKDYSRDVVAPSLGNTTGETY YHLTLDSLIYNKGKLYSNGGNIFYAKEVEWNMLLLDLLNW" gene 593080..594177 /gene="serC" /locus_tag="L0083" /db_xref="GeneID:1114223" CDS 593080..594177 /gene="serC" /locus_tag="L0083" /EC_number="2.6.1.52" /note="catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine" /codon_start=1 /transl_table=11 /product="phosphoserine aminotransferase" /protein_id="NP_266759.1" /db_xref="GI:15672585" /db_xref="GeneID:1114223" /translation="MIYNFGAGPSVLPKEVLKKVQEELLDFEKSGMSVMEISHRSKAF QKVIDEAENDLRDLMSIPQNYKILFLQGGASSQFSMVPMNLAIGKKAYYNISGAFGEK AYDEAVKLSHFLDLMAISLGSTKKDNYNHLLKIDKSKIDEKNGAYLHLTTNNTIEGTS IFPENLPEFASLPLVADMSSNILAVDYDVSKFGLIYAGAQKNLGIAGLTIVIIREDLL NEAESLSSMMDYQILVENGSMYNTPPTFAIYVAGLVFKWVKAQGGVKKLEEMNQRKAQ LLYDLIDQSDFYQNPIKNKDERSICNVVFTSPSQELDELFTQKAEEKGFKSLKGHRSV GGMRASIYNAFPLEGVVELVKFMKEFEEGYK" gene 594174..595370 /gene="serA" /locus_tag="L0084" /db_xref="GeneID:1114224" CDS 594174..595370 /gene="serA" /locus_tag="L0084" /EC_number="1.1.1.95" /note="serine family; similar to N-terminal part of SerA" /codon_start=1 /transl_table=11 /product="D-3-phosphoglycerate dehydrogenase" /protein_id="NP_266760.1" /db_xref="GI:15672586" /db_xref="GeneID:1114224" /translation="MTYHIKTIGNNIDQIALDEIGEGFLVNQVSEAESDAFICRAQPF HDYEFSKALLAIGRAGAGFNNIPIEKCASKGIVVFNAPGGNANAVKELVLSMMIFGTR NLKPANKWLTGQKGDDNTIDGAVEHGKKAFSGSEISGKTLGVIGLGNIGSKVANDAQR LGMRVIGYDPYLSIEHAWNLSHHVKRVNDLAEIFEKADYITVHTPATDETTKMLNWKN LSKCKKGVILLNYARDEITDKEAVLKAIDEGIVRFFGTDFGSEKFYHHPQVFLTPHLG GSTAEASLNCTRMALDSVQTYLKTGEIINSVNFPRVLQELNTPYRVTLINKNVPNVVA QISLAVAAENINIANIVNRGQGDYAYTLLDLDEKDEGKLAALVSRFEAADNIIRVRLI ENQSLV" gene 595394..596044 /gene="serB" /locus_tag="L0085" /db_xref="GeneID:1114225" CDS 595394..596044 /gene="serB" /locus_tag="L0085" /EC_number="3.1.3.3" /note="serine family" /codon_start=1 /transl_table=11 /product="phosphoserine phosphatase" /protein_id="NP_266761.1" /db_xref="GI:15672587" /db_xref="GeneID:1114225" /translation="MAAKGLLVMDVDSTLIEEEVIDLLGEKAGMGDKISEITAAAMSG EIDFKESLRERVALLSGLPTTIFDDVYKEIHLTKGATGLIETLHAKGWKVGLVSGGFH EIVDKIARDLKIDYVFANRLSVENGHLTGKTHGTVVDKDFKVDRLKQWANENKLNLSE VIAVGDGANDIPMLNTAGIGIAFCAKPAVKAAVSYHIDKRNLLTVLEFVDKLADKE" gene complement(596163..596456) /gene="yfjC" /locus_tag="L196178" /db_xref="GeneID:1114226" CDS complement(596163..596456) /gene="yfjC" /locus_tag="L196178" /EC_number="3.6.1.7" /note="membranes, lipoproteins, and porins" /codon_start=1 /transl_table=11 /product="acylphosphate phosphohydrolase" /protein_id="NP_266762.1" /db_xref="GI:15672588" /db_xref="GeneID:1114226" /translation="MFKVKMIVSGRVQGVGFRYFVIISARELGILGRVWNNDDGTVEI LAQTEDEKKLEEFTAIVRGEKSSKGRLSPFAKVTDVKSSPANFPDFTDFNIKY" gene 596779..597537 /gene="yfjD" /locus_tag="L196779" /db_xref="GeneID:1114227" CDS 596779..597537 /gene="yfjD" /locus_tag="L196779" /note="RNA synthesis, modification, and DNA transcription" /codon_start=1 /transl_table=11 /product="tRNA/rRNA methyltransferase" /protein_id="NP_266763.1" /db_xref="GI:15672589" /db_xref="GeneID:1114227" /translation="MEIISSKDNKKIKEARKLLTKKYRKNSYLIEGFHLLEEALKAGR SIKQIFVEENKLTKLTEMIGSEKLLTDLSVNLVSKEVLKSLADSESPQGLIAEVTKIE EVIDFSAAKFLLLENVQDPGNVGTMIRTADAAGFSAVILLGETADIYSPKVMRSMQGS NFHLPLVRMAKEDCFAQLKKAGISILTTTLSANSVSYKIINEPHFALIMGNEGAGVSD EAVKAADKLVHIDMPGQAESLNVAVAAGILMFSL" gene complement(597682..598125) /gene="yfjE" /locus_tag="L197697" /db_xref="GeneID:1114228" CDS complement(597682..598125) /gene="yfjE" /locus_tag="L197697" /note="An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group" /codon_start=1 /transl_table=11 /product="flavodoxin" /protein_id="NP_266764.2" /db_xref="GI:30024002" /db_xref="GeneID:1114228" /translation="MPLAKIVYASMTGNTEACADIVADKLEELGFEVELDECSSVDAD EMADADLCIVGTYTYGDGELPDEIVDFYEELAEVDLSGKIYGCFGSGDTFYDDFCICV DMFEAQFEKTGATKGAELVRVDLSPEDEDEAHLEAFAETLAAHFN" gene complement(598274..599779) /gene="yfjF" /locus_tag="L198289" /db_xref="GeneID:1114229" CDS complement(598274..599779) /gene="yfjF" /locus_tag="L198289" /note="transport and binding protein; multidrug resistance; similar to many multidrug resistance transporters" /codon_start=1 /transl_table=11 /product="membrane-bound transport protein" /protein_id="NP_266765.1" /db_xref="GI:15672591" /db_xref="GeneID:1114229" /translation="MAKSKKNEKEKLPKELTRNAWILVVGAIAPMLDSTMVNIAINKL QSDLHTSLDMIQWAITGYVLALAVAVPVCGYVVNHIDGKKVMQWSLLSFGLFSFLSGI AWNIDSFIIFRAVQGFSAGFITLLMTTLLMQITPPDKLGQLMAVVSTPIILGPIIGPV LGGAIVSGANWHWIFYINIPVVIIAVLLNHFYLSSFKPFNPKAKLDWFGTLLLAGGSV GLIYGMMKGSTNAKNFFNSQMITFVIIGLALFVIYGIYNRIRKNNTVLPLRFFKSKNF TAANIGIFLAGIASNGPMLLLPLFFQNTKGFTAVEAGLMLIPQGLGMMVTRPLIGKMI DRMGARPVVLVSLAISLLGTLPFIFVHENTNLIWLGLVLFVRGMGIGGLQMPMMTDIF IGLDKQDIPGASVGQRIIQNVGSSFGSAVISAVVTAVVTSEIAGQMTTKLHQLAAMHT NLTPTVIAKAKTSVEKAVTLNGYQLGFLVSSIVLIVIAIPAMFLSQKKVNK" gene 599993..600295 /gene="yfjG" /locus_tag="L199942" /db_xref="GeneID:1114230" CDS 599993..600295 /gene="yfjG" /locus_tag="L199942" /note="similar to tetR-family transcription regulators" /codon_start=1 /transl_table=11 /product="transcription regulator" /protein_id="NP_266766.1" /db_xref="GI:15672592" /db_xref="GeneID:1114230" /translation="MFEEKEKKSPNHSRRRGDELKKAIYKAAVHILENEGYEKVTFQN VAKEAKTTRSVLYRYWDDVFDLIFEAVRFNISQNPEWRGNVIDQEINSGSLRTRFN" gene 600267..600620 /gene="yfjH" /locus_tag="L200264" /db_xref="GeneID:1114231" CDS 600267..600620 /gene="yfjH" /locus_tag="L200264" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266767.1" /db_xref="GI:15672593" /db_xref="GeneID:1114231" /translation="MGACGQDLIELLTFMRENFKLYPKGFLAFVSFMQSQGKNVLEST VGNVLPSNLIIMERLLARAQERGEAREKIGQTAKLLPFQMTRYHMLLEGQSMNDKQIN ELVDEVLLPIYIKNT" gene 600904..601758 /gene="pepM" /locus_tag="L883" /db_xref="GeneID:1114232" CDS 600904..601758 /gene="pepM" /locus_tag="L883" /EC_number="3.4.11.18" /note="catalyzes the removal of N-terminal amino acids from peptides and arylamides" /codon_start=1 /transl_table=11 /product="methionine aminopeptidase" /protein_id="NP_266768.1" /db_xref="GI:15672594" /db_xref="GeneID:1114232" /translation="MITLKSQREIEQMERSSKILADIHIGLRELIKPGIDMWEIEEYV RKVCKEKNVLPLQIGVDEGNYNPFPYATCCCLNDEVAHAFPRHQILKDGDLIKVDMVL GLVEDGSVDVSKLNFDDAESMVKYQEEFRGGVADSCWAYAVGQVSDEVKNLMDVTREC LYLGIEQAKVGNRIGDIGAAIQEYAESRGYGVVRDLVGHGVGPTMHEEPMVPHYGRAG RGLRLREGMVLTIEPMINTGGWEIDHDGERGYVTLDGSLSCQYEHQFVITKDGPVILT SQGEERTY" gene 601790..602683 /gene="ygaB" /locus_tag="L1778" /db_xref="GeneID:1114233" CDS 601790..602683 /gene="ygaB" /locus_tag="L1778" /note="probably tRNA-processing ribonuclease; similar to ribonuclease BN; evidenced by COGnitor" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266769.1" /db_xref="GI:15672595" /db_xref="GeneID:1114233" /translation="MKKVIQKIAELTTTFMTFFKSSEMSLSSIAVAYYLLLAIFPLGL IVGNILPFLHINTTALLSFLSEQLPSDVYKGIEPVINNLLNQRNTGLLSLSVLAGFWT FSRALSALQMSMNKAYEVFNHRDFIVSRIIGLAAGFAILLFLYFSIVLSTFGQLILEQ VHRLFPFDDHLYRTLHNMTLPAIAVATFLSLMMLYFILPNVKIRKLRYTMPGTIFSTF VLVFLTNWIAKYVSFALQRLDDLKLIGSLVVFALMIWFIFIARVLIIGAILNAVYQKT KVGKIETRRGEIVEFIKEIRK" gene complement(602814..603260) /gene="ygaC" /locus_tag="L2829" /db_xref="GeneID:1114234" CDS complement(602814..603260) /gene="ygaC" /locus_tag="L2829" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266770.1" /db_xref="GI:15672596" /db_xref="GeneID:1114234" /translation="MKKLMNLFKSETVRYLIFGVLATAVYAFVKWLTWQAWHSGWGSE TAAQASSIIFAFFTNKLFVFKHESSNLLRDFINFTSGRIVLLLLSIFINWWFIDQHPD ILMNLFGLSKNNMVAALNLVVQVLIIVINYLYSKFFVFKKDKNLTE" gene 603398..604129 /gene="ygaD" /locus_tag="L3407" /db_xref="GeneID:1114235" CDS 603398..604129 /gene="ygaD" /locus_tag="L3407" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266771.1" /db_xref="GI:15672597" /db_xref="GeneID:1114235" /translation="MNQMMKKVVILLLISGLVLVTPHAFATAGGFRGGGNRSTRTGGN FGGGNTNSHYSNTGSNSYTSNSSTSRMGSRYNRGRIWKWLIVLAGLGFYFIRNRVKLP FKKRGYFQEKTLNDSALEAEIEAIFLKVQDAWDKHDLRALSESYGDNLYEKHEKILQK MSDKGQINHTRSVVLDGIMRYKEVKDNQFEVDLYFVAIDYLVSVNSGQIIAGNTQERR AFKQRWTFSGQKGALRVEKMKEFKI" gene 604161..604436 /gene="ygaE" /locus_tag="L4152" /db_xref="GeneID:1114236" CDS 604161..604436 /gene="ygaE" /locus_tag="L4152" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266772.1" /db_xref="GI:15672598" /db_xref="GeneID:1114236" /translation="MILYLLVLLAVWNLIVFVFYAVDKYKAQHHLWRIPEKVLLAQAL LGGGTGAILAGHLCHHKTRKWYFNFSWYVGLLVDAGLIFLIIKFFAK" gene 604542..604718 /gene="ygaF" /locus_tag="L4536" /db_xref="GeneID:1114237" CDS 604542..604718 /gene="ygaF" /locus_tag="L4536" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266773.1" /db_xref="GI:15672599" /db_xref="GeneID:1114237" /translation="MPKQRFYSFMIGTVLEAWIFSWSFLSASWFLATFFGFLLVRRIF LAYRLDKFIRDMKM" gene 604822..605751 /gene="ptsK" /locus_tag="L4822" /db_xref="GeneID:1114238" CDS 604822..605751 /gene="ptsK" /locus_tag="L4822" /note="catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system" /codon_start=1 /transl_table=11 /product="HPr kinase/phosphorylase" /protein_id="NP_266774.1" /db_xref="GI:15672600" /db_xref="GeneID:1114238" /translation="MAVSVQDLLDKIHFHVIYSTETALQKEITTSEIMRPGLEMAGYF DYFTPERIQLFGMKEWSYMMTVVGDNRYDLLKKVMAKETPVVIVARNLEIPSEMVAAA KKSDIVLLQSREATSRLNSVLTSFLDERLAERTTVHGVLMDIFGVGVLIQGASGIGKS ETGLELVKRGHRLVADDRVDVFQRDAFTLSGEPAEILRNMIEIRGVGIIDVMSLFGAG AVKDSTDIDMAIYLEYYDKEKAFDRLGNAPTIVEFSDVEVPQTRIPVKTGRNVSVIVE AAVMNFRAKQMGFDATKTFEDRLTDLISHNKES" gene 605815..606600 /gene="lgt" /locus_tag="L5776" /db_xref="GeneID:1114239" CDS 605815..606600 /gene="lgt" /locus_tag="L5776" /note="transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein" /codon_start=1 /transl_table=11 /product="prolipoprotein diacylglyceryl transferase" /protein_id="NP_266775.1" /db_xref="GI:15672601" /db_xref="GeneID:1114239" /translation="MNNLFPFLALNKIALQLGPLAIHWYAIFIVGGAALAVWLACKEA PKRNIKTDDIIDFVLFAFPLGIVGARLYYVIFQWSYYSQHPSQIIAMWDGGGAIYGSL IAGAIVLFVFSYYRMIHPLDLLDITIPGVFLAQAMGRWGNFVNQEAYGKIVSNLDWLP AFIRNQMFIDGHYRMPTFLFESIGTLSGFILVMVFRHRIKGLKRGDIFSFYLVWYGAV RFIVEGMRTDSLMLGPARVSQWLSVLLVIVGLVLFIYRRMKKN" gene 606768..607187 /gene="ygaI" /locus_tag="L6768" /db_xref="GeneID:1114240" CDS 606768..607187 /gene="ygaI" /locus_tag="L6768" /note="similar to a tropomyosin-related protein STRP from Saccharomyces cerevisiae" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266776.1" /db_xref="GI:15672602" /db_xref="GeneID:1114240" /translation="MGNIALLIIAIAFAVLVVFLVIVLHKVSKVVEEANRTVKLVSSD VDVLLHQADGIMTKANTLLDDVNGKVATIDPLFTAVADLSESVSDINASSRKLVTRLN RGSTKRKTTSASAVVLAKTAKKFFVKKDKTEAGVKVN" gene 607217..607780 /gene="ygaJ" /locus_tag="L7226" /db_xref="GeneID:1114241" CDS 607217..607780 /gene="ygaJ" /locus_tag="L7226" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266777.1" /db_xref="GI:15672603" /db_xref="GeneID:1114241" /translation="MSKKTGFLVGALVGAAAALFLAPKKGSELREGAGKIYDDLKENP QETLTGMRDTALDFSAEKFNDIKEKFDSGEISADKAKEFLLSKRDLIMEKVDSGELSK DSVVDFFNDTKDAVVEKINSMKDSGEELFDENESDISEEAAEVVAKFRDAKDEVKEDI DTESLAEEAKKIADKAKELTNFPDEKE" gene 607913..609331 /gene="gnd" /locus_tag="L0046" /db_xref="GeneID:1114242" CDS 607913..609331 /gene="gnd" /locus_tag="L0046" /EC_number="1.1.1.44" /note="catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate" /codon_start=1 /transl_table=11 /product="6-phosphogluconate dehydrogenase" /protein_id="NP_266778.1" /db_xref="GI:15672604" /db_xref="GeneID:1114242" /translation="MAQANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEEVYK EHQDKNLVLTKTLEEFVGSLEKPRRIMLMVQAGAATDATIKSLLPLLDKGDILIDGGN THFPDTMRRNAELADSGINFIGTGVSGGEKGALLGPSMMPGGQKEAYDLVAPIFEQIA AKAPQDGKPCVAYMGANGAGHYVKMVHNGIEYGDMQLIAESYDLLKRVLGLSNAEIQA IFEEWNEGELDSYLIEITKEVLKRKDDEGEGYIVDKILDKAGNKGTGKWTSESALDLG VPLPLITESVFARYISTYKDERVKASKVLSGPAVNFSGDKKEVIEKIRKALYFSKIMS YAQGFAQLRKASEEFDWDLPYGTIAQIWRAGCIIRAEFLQNITDAFDKDSELENLLLD DYFVDITKRYQEAVRDVVSLAVQAGIPIPTFTSAISYYDSYRSENLPANLIQAQRDYF GAHTYERTDKAGIFHYDWYTED" gene 609512..611524 /gene="kupA" /locus_tag="L9458" /db_xref="GeneID:1114243" CDS 609512..611524 /gene="kupA" /locus_tag="L9458" /note="transort and binding protein, cations" /codon_start=1 /transl_table=11 /product="potassium uptake protein" /protein_id="NP_266779.1" /db_xref="GI:15672605" /db_xref="GeneID:1114243" /translation="MGYESNRSFNKATGAGFIIAMGIVYGDIGTSPLYTMESIVQGQG GLERISETSIIGALSLIIWTLTLITTVKYVWIALKADNNHEGGIFSLFTLVRKYAKWL IIPAMIGGAALLSDGALTPAVTVTSAIEGLRSIPAFHEAFGQQQLPIVIITLAILAVL FLIQRFGTSIVGKVFGPVMFIWFSFLGITGLINLFGDFSVLQAINPYWAIHLLLSPEN KAGIFVLGSVFLATTGAEALYSDLGHVGRGNIHVSWPFVKVCIILSYCGQGAWLLQNR GKSLGDINPFFAVLPQNLIIFSVILATLAAIIASQALISGSFTLVSEAIRLKLLPRLR IFYPGETFGQLYIPAVNLGLWLAASFIVVYFQSSAHMEAAYGLAITVTMLMTTTLLTV YLSHYQKVKKVLVGLFFTVFIFIEGLFFAASAVKFMHGGYVVVIIAAMILFVMAIWHK SDQLFYKYLNSSNLNDYKEQMDKLRKDETYDLYHTNVVYLTAKMDKEWIDRSILYSIL DKRPKKAKVYWFVKVNVTDEPYTSEYEVDMLGTDFIVCVNLYLGFHMRQEIPRYLRTI VTNLMESGRLPQQNQTYSITPGRKVGDFRFIILEEKLINARQMPGFERFVLQTKEQIK KITASPARWFGLHFSEVTVETVPLVLSDVKNLEIHERISEENQGES" gene 611749..613764 /gene="kupB" /locus_tag="L11749" /db_xref="GeneID:1114244" CDS 611749..613764 /gene="kupB" /locus_tag="L11749" /note="transort and binding protein, cations" /codon_start=1 /transl_table=11 /product="potassium uptake protein" /protein_id="NP_266780.1" /db_xref="GI:15672606" /db_xref="GeneID:1114244" /translation="MGQVHLHNRSFNKATSAGFLIALGIVYGDIGTSPLYAMQAIVRG QGGLANLSESFILGAVSLVIWTLTLITTVKYVLIALKADNHHEGGIFSLFTLVRRMRK WLIIPAMIGGATLLADGALTPAVTVTSAIEGLRGVTHVYSNQTAVMVTTLIILAFLFL IQRFGASLVGRLFGPIMFIWFGFLGVSGLINSFLDLSILKAINPYYAIHLLFSPENKA GFFILGSIFLVTTGAEALYSDLGHVGRGNIYVSWPFVKICIILSYCGQGAWLLAHRGE HIEKLNPFFAVLPDNMVIYVVILSTLAAIIASQALISGSFTLVSEAIRLKLLPLFKIY YPGQTLGQLYIPAVNFALWVTTSFFVLYFKTSEHMEAAYSLAITITMLMTTTLLTYFL IQKGTPKIAIAIISIGLFCIEGSFFAASLVQFINGAYIVVLIALAIIFVMFIWNKSHK IVMKYIKSLNINEYKNQLNALRHDESYDLYQTNVVYLTSKMDHEWIDRSILYSILDKR PKRAECYWFVNVKVTDEPYTSEYKVDMMDTDFIVRVNLYLGFRMRQEVPRYLRTIVTD LMESGRLPRQHQHYSITPGRKVGDFRFVVVEEKLMNARQMPGFERFVLQTKAQIKRIT ASPIRWFGLQFSEVTVETVPLVLSDVRNLEIHERLEQVDEAEASATH" gene 614196..614861 /gene="ygbB" /locus_tag="L14190" /db_xref="GeneID:1114245" CDS 614196..614861 /gene="ygbB" /locus_tag="L14190" /note="similar to YqfU of Bacillus subtilis" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266781.1" /db_xref="GI:15672607" /db_xref="GeneID:1114245" /translation="MTIIGVKIDKKFMRDLLILILGVGLYVLSVQLFVIPNRLASNGV AGFSVLMDFVFGINPALTFFLVNVPLFIFGGRSLPRRILLLSIPGALAMSGWLMIYEA LGVTGFQFSHVIFAGIFDGLLSGFGAGLVIISEGTFGGSILLSRILEEQWNFKIDKVL FMVDVVVLSVSLLTFLSLPNFAVTLLSCYIFSKMTLIVGREDYRKSLMNRGKRIYQKV FAA" gene 614999..615883 /gene="miaA" /locus_tag="L15012" /db_xref="GeneID:1114246" CDS 614999..615883 /gene="miaA" /locus_tag="L15012" /EC_number="2.5.1.75" /function="biosyntheiss of the modified base isopentenyladenosine in tRNA" /note="IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity" /codon_start=1 /transl_table=11 /product="tRNA delta(2)-isopentenylpyrophosphate transferase" /protein_id="NP_266782.1" /db_xref="GI:15672608" /db_xref="GeneID:1114246" /translation="MKNNKVLVVVGPTAVGKTALGIDLAIKFNGEIISGDSQQVYQGL DIGTAKVTMAEQAQVPHHLIDVRKWTENFSVHDFVIEANQLIKEILDQGKVPIIVGGT GLYIQSLIEGYHLGGQENHEEMMKLREELSLLSDEELFAKVIKINPDISELNRRRAIR FLELQTFGSQDENLGSDYDFLLIGLNADRKVLYDRINQRVDQMMREGLLDEARTLYEQ APEVQAAKGIGYKEFFPYFSGDISLEEAVELVKRNSRRYAKRQLTWFKNRMSVEFEDV FSKNYPEPIFDKVTQFLN" gene 615966..616634 /gene="ygbD" /locus_tag="L15964" /db_xref="GeneID:1114247" CDS 615966..616634 /gene="ygbD" /locus_tag="L15964" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266783.1" /db_xref="GI:15672609" /db_xref="GeneID:1114247" /translation="MTDKKWIDLGMKYGGFMAQDHIFLENRLAALTDVKDKRLLVTPP ASVLNAYFAELYQKRSPKDATDYFFELSKAFDIFEENPDFQLEGKNGYENFRFIRLNL SGKSFGFSYKNDAEEAIIFSEFPVKVTAELMFEIAQIFPHYLLVEEDGKLTMKPAQFQ SEFEKVKDLTALTEQAENGEYIRLAGYNIEDLLEQAEEIGFLSPLCFGRDGRKHFIYI TKGF" gene 616805..617701 /gene="ygbE" /locus_tag="L16806" /db_xref="GeneID:1114248" CDS 616805..617701 /gene="ygbE" /locus_tag="L16806" /note="probably membrane protease subunit; evidenced by COGnitor" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266784.1" /db_xref="GI:15672610" /db_xref="GeneID:1114248" /translation="MIFIPLVVLAIILLILIFSLSTIVFVVKQQTVAIVERFGKYQFT ANPGFHLKLPWGIDRIAARVQLRLLQTEMTVETKTADNVFVTMNIATQYRVNEQSIKD AYYKLMNPGEQIKAYIEDALRSAVPKLTLDDVFEKKDEIALEVQKTVAEEMQTYGYII VKTLITKVEPDAEVKQSMNEINAAQRKQDASQMLANANKIQVVTAAEAEAEKDRLHGV GIAEQRKAIVDGLAQQITEIKKLGVALDEEQIMAILLTNQYLDTLNQFAAGGNSTIFL PSGAEGAESLRTQILSAIKAGK" gene 617800..617871 /locus_tag="L200109" /db_xref="GeneID:1113566" tRNA 617800..617871 /locus_tag="L200109" /product="tRNA-Arg" /db_xref="GeneID:1113566" gene 618076..618336 /gene="ygbF" /locus_tag="L18041" /db_xref="GeneID:1114249" CDS 618076..618336 /gene="ygbF" /locus_tag="L18041" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266785.1" /db_xref="GI:15672611" /db_xref="GeneID:1114249" /translation="MNQEKFIKYLSWVATGMSVMMYVSYLPQIANNLSGMKGNPIQPL VAAINCTLWVTYGIGKKPRDLALATANFPGIIFGLVTFFTAL" gene 618494..618569 /locus_tag="L200110" /db_xref="GeneID:1113567" tRNA 618494..618569 /locus_tag="L200110" /product="tRNA-Lys" /db_xref="GeneID:1113567" gene 618694..619617 /gene="ygbG" /locus_tag="L18686" /db_xref="GeneID:1114250" CDS 618694..619617 /gene="ygbG" /locus_tag="L18686" /EC_number="3.1.26.11" /note="member of metallo-beta-lactamase family; the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase; in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not; associates with two zinc ions" /codon_start=1 /transl_table=11 /product="ribonuclease Z" /protein_id="NP_266786.1" /db_xref="GI:15672612" /db_xref="GeneID:1114250" /translation="MEIQFLGTGAGQPSKSRNTQAIALKMLDERNEIWLFDCGEATQH QILNTTIKPRKITKIFITHLHGDHIFGLPGFLSSRSFQSSDEQTDLELYGPVGIKDFV LTALRISGSRLAYRINFHEIDSAGKIFEDDSFEVHTDLLDHTIFCLGYRVVEKNRIGE LDANALKEAGLPFGPLFGKIKKGEIVQYEGKTFDPKDYIGADKAGKIVTILGDTRKSN VAVRLAYGADLLVHEATYEANESKMAKAHGHSTTKQAADVAKEAGVNRLLLTHISARY VGPLVGQLVREAQTVHSNTFVVKDFYEEKIG" gene 619610..620311 /gene="ygcA" /locus_tag="L19516" /db_xref="GeneID:1114251" CDS 619610..620311 /gene="ygcA" /locus_tag="L19516" /note="aerobic energy metabolism" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_266787.1" /db_xref="GI:15672613" /db_xref="GeneID:1114251" /translation="MVRNIVITGATGDIAKEIVKSLSKENDHLILVSRSRKALIERYG QLENVTLLTNDELLTNEQSFVVDILINNAGFGIFKEFTELTDGEITEQFVINTLMPIQ LTRLLEPKVQLINIASIAGKLPTGKSSIYVASKAALITFSDALRMENPQLIVTTVNTG PVKTKFHKDNGDYLEKVGKNAISASKVADKVVNNLGKRKREINLPWTLSTAAKLRAIF PSLFDFISAKFFNFK" gene 620478..622706 /gene="recJ" /locus_tag="L0259" /db_xref="GeneID:1114252" CDS 620478..622706 /gene="recJ" /locus_tag="L0259" /codon_start=1 /transl_table=11 /product="single-stranded DNA specific exonuclease" /protein_id="NP_266788.1" /db_xref="GI:15672614" /db_xref="GeneID:1114252" /translation="MIKAKYDWKVADTAISEDFLKIAKKHKLDELTSRVLYQRGIHAE AEIEQFLKPSLENLHDPFLLHDMEKATGRILSAIEQGENILIYGDYDADGMTASSVMK SALDELGAEAQVYLPNRFTDGYGPNLDVYQYYIKNENINLIITVDNGVAGLEAITWAQ ENGVDVIVTDHHSIPDQLPPAYAIVHPEHPDSQYPFKYLAGVGVAFKVACALLEYAPS EMLDLVAIGTIADMVSLTDENRILVAHGLKVLAQTERAGLQELMKYAGVDFDKITEET VGFQIAPRLNALGRLDDPNPAIELLTGWDEDEAHEIAKMIDQKNSERKEIVEKIHNEA LSMLTDEPVQILYHKDWHKGVLGIVAGRLLEAIHKPVIMLAQEDGILRGSARSIENFD IFKALNAHRELFIAFGGHKQAAGMTLSLENVEAVKKAMIDYIVDNHLDMSKKSPLEIA DRCHLDDISLSTITNLAKLAPFGMDNPKPRFLIEDYKVIQSRSMGKDNAHLKLKIQEE KQQIDAVYFQHGSEELEFEQAQTKLVATLSSNSWNGNTSLQLMIEDADSVGVELLDIR SKQIPIPKEANIFSQNQLKHGIMEDVLVIEEIPGDLAGLSVLKEAVSKAASDDFKMIY FKNKITDSYYLTGSGTREEFARLYKAIYQFPEFDIRYKLKSLADYLKIPHLLLVKMIK IFEELEFVSIDNGLMTVNKTADKREISESTIYQELEKIVKMQELFALAPVKEIYQNLL EK" gene 622784..623341 /gene="apt" /locus_tag="L22735" /db_xref="GeneID:1114253" CDS 622784..623341 /gene="apt" /locus_tag="L22735" /EC_number="2.4.2.7" /note="catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis" /codon_start=1 /transl_table=11 /product="adenine phosphoribosyltransferase" /protein_id="NP_266789.1" /db_xref="GI:15672615" /db_xref="GeneID:1114253" /translation="MLEKRSTDNSVSNKNMELKDYIATIENYPKEGVVFRDISPLMAD GNAYNYAATEIVQYARDKEIDMVVGPEARGFIIGCPVAFALGVGFAPVRKPGKLPREV IEATYEKEYGTDTLTMHSDSIKPGQRVLIVDDLLATGGTIAATIELVEKMGGIVVGCA FLIELDELKGREKIGDYDYKVLMHY" gene 623557..624120 /gene="rpoE" /locus_tag="L0141" /db_xref="GeneID:1114254" CDS 623557..624120 /gene="rpoE" /locus_tag="L0141" /EC_number="2.7.7.6" /note="participates in both the initiation and recycling phases of transcription; in the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling" /codon_start=1 /transl_table=11 /product="DNA-directed RNA polymerase subunit delta" /protein_id="NP_266790.1" /db_xref="GI:15672616" /db_xref="GeneID:1114254" /translation="MKITALEGQKISELSMIEVAHALLEQNGKEMQFSEIIRAIQDYL EKSDDEIKASISRFYTEINTDGSFIPLGNNIWALRSWYAIDEIDEEVIALDEIEDEEE EKPAKKRKKVNAFGIEDEIDPEDEEGTKETTEEDMSYDTQAEDEDKDDVAAYDAELAE VELDNVDEEVDIDVEDDEDDSDDTDED" gene 624257..625909 /gene="ygcC" /locus_tag="L24228" /db_xref="GeneID:1114255" CDS 624257..625909 /gene="ygcC" /locus_tag="L24228" /note="similar to YrrL of Bacillus subtilis" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266791.1" /db_xref="GI:15672617" /db_xref="GeneID:1114255" /translation="MVDKETTEFSRGSFKEKILRQLEENAAKQAETKFPDPEDFERPS RSDSEEPERKIEPRKVDLEPFKLPVFDFPAADENEEEPFVENENLSEEGDSLRKNLDG VVSEEIQNQDIPPQFSRSESKVQDEKIEQEQFSEKKESEKMVKHQPSRRTNSSSKKTS SIKKNKNKNKNKKKKKVTAGKIIAVIVVLLVLVVGGTGWYGYNFVKSGIQPLDSKNAT AKSINIPAGSSSKQIGEILQRQSIIKNGMVFQYYTKFKNYSEFKSGYYNLAPNMSLST IAGKLEEGGTEKPVAPTLGKILVPEGYTLTQIAKAVTVNSGSNEKNAKTPFSEADFMK TVQDPTFIAKMVKAYPKLFASLPTKDSGIKYQLEGYLFPATYDYTKSSTVESVIENMI QAANTQLTPYYDTIAQKNLTVNEVLSLAALVEKEANNDDDRRNVAGTFYNRMNAGMTL GSNLSILYAEGKLGEKTSLSEDANIDTNLDSPYNLYANTGFGPGPVDSPSLSSIKAVL DPAQNDYLYFVADVTTGKVYFAKNLDEQNANVQKYVNDKISS" gene 625972..626442 /gene="greA" /locus_tag="L0140" /db_xref="GeneID:1114256" CDS 625972..626442 /gene="greA" /locus_tag="L0140" /note="necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus" /codon_start=1 /transl_table=11 /product="transcription elongation factor GreA" /protein_id="NP_266792.1" /db_xref="GI:15672618" /db_xref="GeneID:1114256" /translation="MEKTFPMTQEGLDKLKLELENLKLVKRPEVIDRIKVARSYGDLS ENSEYEAAKDEQAFIEGRISTVETMIRYAEIVDNAKIAKDEVALGKNVTFVEVGETDE ESYQIVGTAEADPFSGKISNESPIARVLIGKKVGDIVNVPLPVGEMTVKIVKVD" gene complement(626561..627322) /gene="tra904E" /locus_tag="L0461" /db_xref="GeneID:1114257" CDS complement(626561..627322) /gene="tra904E" /locus_tag="L0461" /experiment="experimental evidence, no additional details recorded" /note="evidence experimental PMID:1328163; transposon related function. IS3/IS150/IS904 family transposase" /codon_start=1 /transl_table=11 /product="transposase of IS904E" /protein_id="NP_266793.1" /db_xref="GI:15672619" /db_xref="GeneID:1114257" /translation="MHRRPSKQQVEREILSEKIKAVFHEHKGRYGAVRITKVLHNTGI MTNTKRVGKLMHLMGLYAKGSRYKYKHYNRKGASLSRPNLINQIFKATAPNKVWLGDM TYIPTKEGTLYLAVNIDVFSRKIVGWSMSSRMQDKLVRDCFLQACGKEHPQPGLIVHT DQGSQYTSSRYQSTLRQVGAQSSMSRKGNPYDNAMMESFYKTLKRELINDAHFETRAE ATQEIFKYIETYYNTKRMHSGLDYKSPKDFEKYNS" gene complement(627418..627708) /gene="ygcD" /locus_tag="L27434" /db_xref="GeneID:1114258" CDS complement(627418..627708) /gene="ygcD" /locus_tag="L27434" /note="transposon related function" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266794.1" /db_xref="GI:15672620" /db_xref="GeneID:1114258" /translation="MARRKFDKQFKNSAVKLILEEGYSVKEVSQELEVHANSLYRWVQ EVEEYGESAFPGNGTALADAQHKIKLLEKENRYLKEELELLKKFRVFLKRSK" gene complement(627782..628465) /gene="tra1077D" /locus_tag="L0469" /db_xref="GeneID:1114259" CDS complement(627782..628465) /gene="tra1077D" /locus_tag="L0469" /experiment="experimental evidence, no additional details recorded" /note="evidence experimental PMID:1328163; transposon related function. IS3/IS150/IS904 family transposase" /codon_start=1 /transl_table=11 /product="IS1077D transposase" /protein_id="NP_266795.1" /db_xref="GI:15672621" /db_xref="GeneID:1114259" /translation="MSELLKQRGYHVNHKKVQRLMKKLGLRVTSYWHKSRKYNSYKGK VGTVAKNKLHRRFRTSTPHQKITTDTTEFKYYEDGIQKKCYLNPYIDLFNSEVISYHI SKQPSYQSIDIALNQALAVTSDCPYRRTFHSDQGWGYQMRDYVSKLKSHRIFQSMSRK GNGHDNSVMENFFGLLKQEIYYGHIFSSFEELEQVIVIWIRYYNTKRIKQKLNWMSPI QFRLNYQNN" gene complement(628597..629154) /gene="ygcE" /locus_tag="L28615" /db_xref="GeneID:1114260" CDS complement(628597..629154) /gene="ygcE" /locus_tag="L28615" /note="transposon related function" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266796.1" /db_xref="GI:15672622" /db_xref="GeneID:1114260" /translation="MVKYSIELKQRVIQDYLSGKGGSTYLAKLHNVGSSSQVRHWIRN YRAEGLPTAHSKVNKNYSMELKENAVQCYLTTDLTYEAVARKFEITNFTLLASWVNHF KIYGEVPISKKRGRRKKLESIASSMTQNPNDSQRIKELEQELRYAQIEVAYLKGLRRL EKNALMNKNQDSSTVSVKPSNSKKS" gene 629354..629809 /gene="ctsR" /locus_tag="L0223" /db_xref="GeneID:1114261" CDS 629354..629809 /gene="ctsR" /locus_tag="L0223" /note="transctiptional regulator; adaptations and atypical conditions; regulator of class III stress genes (clpC, clpP)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266797.1" /db_xref="GI:15672623" /db_xref="GeneID:1114261" /translation="MAGQKNTSDIIEAYLRKLLEEAQVIEIKRADLANQFDVVPSQIN YVIKTRFTASKGFDVESKRGGGGYIKIVKYQYSARHEFLTALYQKVPANLSSKAAHDI VQLLFDEKVLTEREGNLLLLVITDGAISPFTRGIMMKSIINRLDRDDEI" gene 629799..632249 /gene="clpC" /locus_tag="L0222" /db_xref="GeneID:1114262" CDS 629799..632249 /gene="clpC" /locus_tag="L0222" /experiment="experimental evidence, no additional details recorded" /note="evidence experimental PMID:10094684; adaptations and atypical conditions; CLPC subfamily" /codon_start=1 /transl_table=11 /product="ATP-dependent protease ATP-binding subunit" /protein_id="NP_266798.1" /db_xref="GI:15672624" /db_xref="GeneID:1114262" /translation="MKFENIKYTPTLDRILEKAEEYAHQYQYGTIESAHLLAAMATTS GSIAYSLLAGMNVDSSDLLIDLEDLSSHVKVKRSTLRFSPRAEEVMTAASFLAIHNNS EAVGTEHLLYALLQVEDGFGLQLLKLQKINIVSLRKELEKRTGLKVPESKKAVTPMSK RKMAKGVAENSTTPTLDSVSSDLTEEARLGKLDPMIGREAEIDRLIHILSRRTKNNPV LVGEPGVGKSAIIEGLAQRIVNGQVPIGLMNSRIMALNMATVVAGTKFRGEFEDRLTA IVEEVSSDPDVIIFIDELHTIIGAGGGMDSVNDAANILKPALARGDFQMVGATTYHEY QKYIEKDEALERRLARINVDEPSPDEAIAILQGLREKFEDYHQVKFTDQAIKSAVMLS VRYMTSRKLPDKAIDLLDEAAAAVKISVKNQQTKRLDLEKELTEAQEELSEAVIKLDI KASRTKEKAVEKIADKIYKFSVKEDKRQEVTDQAVVAVASTLTGVPITQMTKSESDRL INLEKELHKRVVGQEEAISAVSRAIRRARSGVADSRRPMGSFMFLGPTGVGKTELAKA LADSVFGSEDNMIRVDMSEFMEKHSTSRLIGAPPGYVGYDEGGQLTERVRNKPYSVVL LDEVEKAHPDVFNIMLQILDDGFVTDTKGRKVDFRNTIIIMTSNLGATALRDDKTVGF GAKNITADYSAMKSRILEELKRHYRPEFLNRIDENIVFHSLESQEIEQIVKIMSKSLI KRLAEQDIHVKLTPSAVKLIAEVGFDPEYGARPLRKALQKEVEDLLSEQLLSGEIKAG NHVSIGASNKKIKIAQIV" gene 632384..632941 /gene="ygdA" /locus_tag="L32389" /db_xref="GeneID:1114263" CDS 632384..632941 /gene="ygdA" /locus_tag="L32389" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266799.1" /db_xref="GI:15672625" /db_xref="GeneID:1114263" /translation="MIKFNIRGENVEVTDAIRAYVEDKIGKLDKYFNDGHEVTAYVNL KVYSEKRAKVEVTLPAKNVTLRAEDTSQDMYSSIDFVEEKLERQIRKYKTRMNRKPRN AVPTGQAFGDEFAPLEKADEVAEDHVDIVRTKHVALKPMDAEEAVLQMDMLGHDFYVF TDADSNGTHVVYRRTDGRYGLIETE" gene 633126..634427 /gene="eno" /locus_tag="L0007" /db_xref="GeneID:1114264" CDS 633126..634427 /gene="eno" /locus_tag="L0007" /EC_number="4.2.1.11" /note="enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis" /codon_start=1 /transl_table=11 /product="phosphopyruvate hydratase" /protein_id="NP_266800.1" /db_xref="GI:15672626" /db_xref="GeneID:1114264" /translation="MSIITDIYAREVLDSRGNPTLEVEVYTEDGAFGRGMVPSGASTG EHEAVELRDGDKSRYNGLGTQKAVDNVNNIIAEAIIGYEVTDQQAIDRAMIALDGTEN KGKLGANAILGVSIAAARAAADELGVPLYNYLGGFNAKVLPTPMMNIINGGSHSDAPI AFQEFMIVPVGAPTFKEALRWGAEIFHALKKILKARGLETAVGDEGGFAPKFDGTEDG VETILKAIEAAGYKAGEDGVMIGFDCASSEFYENGVYDYTKFEGEGGKKLSASEQVDY LEELVSKYPIITIEDGMDENDWDGWKILTERLGKKVQLVGDDFFVTNTKYLERGIREN ASNAILIKVNQIGTLTETFEAIEMAKEAGFTAIVSHRSGETEDSTISDIAVATNAGQI KTGSLSRTDRMAKYNQLLRIEDQLAEVAQYKGLKAFYNLKK" gene 634512..635450 /gene="xerD" /locus_tag="L34517" /db_xref="GeneID:1114265" CDS 634512..635450 /gene="xerD" /locus_tag="L34517" /note="DNA replication, restriction, modification, recombination, and repair" /codon_start=1 /transl_table=11 /product="integrase-recombinase" /protein_id="NP_266801.1" /db_xref="GI:15672627" /db_xref="GeneID:1114265" /translation="MMQFEQLVKEYLLELKLGNYSKKTMAVYEQHIDKFIDFYKKEIC KEMDIYAINKMHYKLFISQLLDNSLRATYINAILKSNKAFYSYLIREQVLKTSPMDSI KLLKETKQALTTFNDDEVKAMLNVWNFNTYLNARNKCIIAVLADTGIRISELINIKDS DLTDQYIRVLGKGDKWRVVPISNELNYLLTKYKRLRDNHFNKIRNRNGKVRELDSELF LGNTGRSIKTITNIEVMITQTGLQANVRASVRCSPHQFRHYWTCKSLELGQDIFTISK LLGHTNLSTTQIYLQKLTNEQLISKAVKFSPLKHLK" gene 635723..636490 /gene="ygdC" /locus_tag="L35731" /db_xref="GeneID:1114266" CDS 635723..636490 /gene="ygdC" /locus_tag="L35731" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266802.1" /db_xref="GI:15672628" /db_xref="GeneID:1114266" /translation="METIIKNKKIAIIIAIIVVLGTILLGAYHQSVSRYSSKIAVQID NVEKLSENNFAPQNHVNDYGQWIVLSKNANNKSNLFQMIKMTREYDKKFSKDESEAKK NEKKITDEVNNKWIEIYTQSMLKASESESYGNKITKVWRDAIFENYATVNGKHYTDFK DAIHAFQTQYSNEFSELNSFFQDNIDSANNLSELIRIYFPEKSNRADDLENFAQDVFN FNDEAINPSGSYSTRSSKLSELDTKALSSSKTVGMSF" gene 637078..637218 /gene="ygdD" /locus_tag="L37026" /db_xref="GeneID:1114267" CDS 637078..637218 /gene="ygdD" /locus_tag="L37026" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266803.1" /db_xref="GI:15672629" /db_xref="GeneID:1114267" /translation="MTWSKESREKQSNRFINPFKVIDYRGEVIAVYKNSVEEFLAFVG EE" gene 637534..637716 /gene="ygdF" /locus_tag="L37539" /db_xref="GeneID:1114268" CDS 637534..637716 /gene="ygdF" /locus_tag="L37539" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266804.1" /db_xref="GI:15672630" /db_xref="GeneID:1114268" /translation="MNNNLKEKLFFCYNKKLKQYLYFECGIDSEFSALHPKTMKEFWV YVKTEELDKALTNYKK" gene 637738..638907 /gene="ygdE" /locus_tag="L37749" /db_xref="GeneID:1114269" CDS 637738..638907 /gene="ygdE" /locus_tag="L37749" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266805.1" /db_xref="GI:15672631" /db_xref="GeneID:1114269" /translation="MKNENFVQIPNKMFADTNNDEKLVYAILQYTQTVGLLNKDNRMT RTMIPLLVSDLGWSKGKYSNKKVVTALNGLKEKEYINFESTQGVFTVQINNIDSQEEH TISVDWKENNVKFSGFTKIKYSVIDNLLENKDFTLYSYAEYRTMKTHQYRICYEEWSL VLGMTSRNAFTVIDNSEVIVRVSNGFDLDTNRRETNSYLTFDSVEDVKEVSLKPTYKA QSSKSVVKEQEPELVEDDFDNFEEEELSLKPKVKKRNAITDKKINDMQNEFFGRTIHH KILKKITDPRVRTIEQVKELTDFKYPMSLENYNILMTTKDGYLTEKGKIKLANPQWKN RYLNKLNRESALKQNNERELSQEEINDIIRYQYGEEDEVHKKKRKKLGNDISRFL" gene complement(639665..640240) /gene="tra982" /locus_tag="L200022" /note="transposase-like; evidence experimental PMID:9593305; transposon related function; probably contains a mutation" /db_xref="GeneID:1114270" gene 640780..643767 /gene="hsdR" /locus_tag="L0308" /db_xref="GeneID:1114271" CDS 640780..643767 /gene="hsdR" /locus_tag="L0308" /EC_number="3.1.21.3" /codon_start=1 /transl_table=11 /product="type I restriction enzyme R protein" /protein_id="NP_266806.1" /db_xref="GI:15672632" /db_xref="REBASE:Lla1403I" /db_xref="GeneID:1114271" /translation="MAEAKFEAALIKKLEAEGWTYRKDLSYVSIKVLEGHWREVLNEN NAYKLNGKPLSDVEFGLVMQEVQRIKTPYDAQLLLVGAGGVGSIPITRDDGSNLEVEI FYEDDVAGGRSRYEVVSQVIFDELPHGLASKRIIDLALLINGIPVAHIEEKDEHLQNQ WGAFEQLKGYHGEGLYEGLFAFVQVQFILSQHSANYFARPNRLENYNKTFVFGWRDEQ QKDITDAFVFAHQVLGIPALHRLVTVNMIPDASNSNLMVMRSYQIQATRAILQRMKEM EHNDYIQKEGGYIWHTTGSGKTVTSFKVAQLLAAAPKVKNVLFIVDRVDLVDQTLENF KDFAYIQFKNRIKKVNGRELKRELSHKGASQILLISVQGLTKAVKNGLKNTDRNVIIM DEAHRSANGESVQLIKSAFQKTTWFGFTGTPNFYSDEINDVQTTRDISTHDIFGKRLH TYTIKDAIGDGNVLGFDITYFNPTIEIESLDEKHSEKDYEKEVYQSHVYREQVVQDIL NHWDKTSSGALVAGKREKNVFQAMLAVSGKQAVVHYYNLFKEKAPHLRVAMTFSRDES NQPGTKEQNEALKKAIKEYSSCFNVPSLLNAQEPARAYMIDITKRLARKKPYNQGKDE DRLDLVIVSDQLLTGFDSKYINTIYMDKQLREGMLIQAMSRTNRTFHLNSKPHGKVRF YRQGEQMKSFVENALRIYTRGGNDTLQEADEDSKNEDIQSLEDEHILAEPQSHQIQKL TPAVQELKAFAGEDFSQIPRGEKDLKQFVRLGLETQNQIQQLVQQGYELGNEIDLLDA QGESTGEKVRLDISSFEEFGALQARLNDAREKLPEEERPDLTEIRVGLSLYDHEIIDY DWLVDLLNLFMDQKTPENKASIEKHILPLDEMSQQEIKDIIVDIESGEIKEHFTKATL EDQRKHKRSDRQELKIRRWAANQKVNGNRIVQAFDLFLPGHSLVDNSQLSALVSEIEA EENLSFFGASEFETALMSFFNSL" gene 643807..645354 /gene="hsdM" /locus_tag="L0309" /db_xref="GeneID:1114272" CDS 643807..645354 /gene="hsdM" /locus_tag="L0309" /EC_number="3.1.21.3" /codon_start=1 /transl_table=11 /product="type I restriction enzyme M protein" /protein_id="NP_266807.1" /db_xref="GI:15672633" /db_xref="GeneID:1114272" /translation="MALSNEQKNKMWALLNQTRGQIGLTAYKDYIFGLLFYKYLSEKA TQWLGEVLRGDTWENVYDQDPVRALDYMKQKLGYAIQPKEFFKDWEAAIHEERFNIPM ISDTFGHFNQQIAFEAKDDFEGIFDGMRFDSSDLGSNAQARASVMISMIELLSAPEFD LSTGGDTVSDIYEYLLEKFATVLASDMGQYYTPKEISEVMARILTFGKADEDNFSIYD PAVGSASLLITTASHMKHSNQRGAIKYFGQEKDATPYRLARMNLMMHNIEYNDIQIHH ADTLESDWPDGVIEGKDTPRMFDAVMANPPYSAHWNNKDREDDPRFREYGIAPKTKAD YSFLLHCLYHTKESGRVAIILPHGVLFRGAAEGRIRKALIDKHQIEAVIGFPDKLFLN TGIPVCVLILKKNRANSDILFVDASQGFEKMKNQKQLRPEDIDKITETVIHRKAVDKY SHLATLEEVIENDYNLNIPRYVDTFEEEESIDLADIQGQIDEVDAEIAKANQTLANYF KELGVLK" gene 645351..646574 /gene="hsdS" /locus_tag="L0310" /db_xref="GeneID:1114273" CDS 645351..646574 /gene="hsdS" /locus_tag="L0310" /EC_number="3.1.21.3" /experiment="experimental evidence, no additional details recorded" /note="DNA replication, restriction, modification, recombination, and repair; evidence experimental PMID:9593305; subunit S dictates DNA sequence specificity" /codon_start=1 /transl_table=11 /product="type I restriction enzyme specificity protein" /protein_id="NP_266808.1" /db_xref="GI:15672634" /db_xref="GeneID:1114273" /translation="MKERLKAPELRFDGFTDDWEERKLLDNVEKVLDYRGKSPAKFGM EWGTEGYLVLSALNVKNGYIDKSVEAKYGDHELFDRWMGNNRLEKGDVVFTTEAPLGN VAQVPDNNGYILNQRAVAFKSLQETDDNFFAQLLRSPIVQNTLKASSSGGTAKGIGMK EFAKLNARVPETHEEQRKIGLFFKQLDDTIVLHQRKLDLLKEQKKGYLQKMFPKNGSK IPELRFAEFADDWEERKLGEVATFLNGRAYKQDELLDSGKYKVLRVGNFYTNDSWYYS NMELGDKYYVDKGDLVYTWSATFGPHIWSGEKVIYHYHIWKVELSKFLDRNFTLQLLE ADKARLLSSTNGSTMIHVTKGDMESKIVSIPNIDEQKQIGSFFKQLDNTITLHQRKLD LLKEQKKGFLQKMFI" gene 646595..646720 /locus_tag="L200023" /db_xref="GeneID:1114274" CDS 646595..646720 /locus_tag="L200023" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_835298.1" /db_xref="GI:30024003" /db_xref="GeneID:1114274" /translation="METIQKYLKIIVESNYLHQRKLDLLKEQKRIITNNVYSFFV" gene 646698..647777 /gene="ygeA" /locus_tag="L46679" /db_xref="GeneID:1114275" CDS 646698..647777 /gene="ygeA" /locus_tag="L46679" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266809.1" /db_xref="GI:15672635" /db_xref="GeneID:1114275" /translation="MFIHFLYNIKRFKKIKAELEIAQGENIMKKINIENLCLTLGILS LILSFFNGIRALSLPIGIIGTILPLIFIIKKSRKYQKIILIISVIMSLGSIIIAYGLT YMNSSPDYTSVSVFKKDLDDDKNVVGKTFEFKVTDRTETSINADDEISFFTSKTDAEG IKKGDIVTIKVKRKPTNILGVYIMSGNVQSKKSNIKQHSKSNNEPSNSNTKKIYNLHN TTFSTPSNWVKQLTNSNNPDNTINFTLQDGYLNVHYFETNESIFNNEYRNSFLSSLKN TTSNNMSDFTATNETEGSSSESYAWYISLKQNEEKYNGEMVVLDVDGGIISFTIYVSG DKFSKNYEGDFNNLLDSIKYTKRTN" gene 647939..648208 /gene="ygeB" /locus_tag="L47917" /db_xref="GeneID:1114276" CDS 647939..648208 /gene="ygeB" /locus_tag="L47917" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266810.1" /db_xref="GI:15672636" /db_xref="GeneID:1114276" /translation="MDLNISGLVAALLAFYGVHSFNQYKKRNNQDDQTEWVPRLIKVA TETTAQSLSEKDFYQILNTLRPFVNNCNENYVTFESFTNHTLYGL" gene 648543..648710 /gene="ygeC" /locus_tag="L48473" /db_xref="GeneID:1114277" CDS 648543..648710 /gene="ygeC" /locus_tag="L48473" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266811.1" /db_xref="GI:15672637" /db_xref="GeneID:1114277" /translation="MELFNLEFRALTDIGNKFRIRHHETNKVDIADIRYYDYLFNRCL SLINLAVQYLD" gene 648976..649746 /gene="ygeD" /locus_tag="L48975" /db_xref="GeneID:1114278" CDS 648976..649746 /gene="ygeD" /locus_tag="L48975" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266812.1" /db_xref="GI:15672638" /db_xref="GeneID:1114278" /translation="MKSKNKVIAVVILVIISFGIFFIKKNIDHQKELRAQKVYENKVT TEKKRINELQNSISIDNEIVINTVVKIKNLNLKTKEAQSLKSKYIEKDVKAVYEYIES NINKKDIPNNDVRFNNINELQSNIATLENDAKSYQEMENIFNKNKIEFLINKVSEITQ KEKDQIVKLQAEETEKARLLAEEEKAKKEQELLLKQSVSDQFTPSQNASTNNNLNQTI DPVAEADEFRKNFKEQYGREPSSGEIQMDWLRKQGIVK" gene complement(650157..650996) /gene="tra981C" /locus_tag="L0434" /db_xref="GeneID:1114279" CDS complement(650157..650996) /gene="tra981C" /locus_tag="L0434" /experiment="experimental evidence, no additional details recorded" /note="evidence experimental PMID:8389385; transposon related function. related to a family of IS elements that includes IS2, IS3, IS150, IS600, IS629, IS861, IS904 and ISL1" /codon_start=1 /transl_table=11 /product="transposase of IS981C" /protein_id="NP_266813.1" /db_xref="GI:15672639" /db_xref="GeneID:1114279" /translation="MAQTIQTLALNVRLSCQLLDVPESSYYERINRHPSKTQLRRQYL SLKISQLFNANRGIYGAPKIHHLLLKQGEKVGLKLVQKLMKQLQLKSVVIKKFKPGYS LSDHINRKNLIQTEPTKKNKVWSTDITYISTQQGWCYLSTIMDRYTKKVIAWDLGKRM TVGLVQRTLNKAVQSQNKPKAIIIHSDQGSQYTSHEYEENINLYGMTHSFSRKGYPYH NASLESWHGHLKREWVYQFKYKNFEEAYQSIFWYIEAFYNSKRIHQSLGYLTPNQFEK MTA" gene complement(651008..651175) /gene="ygfF" /locus_tag="L651011" /db_xref="GeneID:1114280" CDS complement(651008..651175) /gene="ygfF" /locus_tag="L651011" /note="transposon related function; orf1 of IS981" /codon_start=1 /transl_table=11 /product="transposase" /protein_id="NP_266814.1" /db_xref="GI:15672640" /db_xref="GeneID:1114280" /translation="MAPATIYKWIDLYSKSNKSSISKADFLELKRQLAKVKEERDILK KVLTIFAEKKK" gene 651422..651511 /locus_tag="L200024" /db_xref="GeneID:1114281" CDS 651422..651511 /locus_tag="L200024" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_835299.1" /db_xref="GI:30024004" /db_xref="GeneID:1114281" /translation="MNDFFNELIENEVWLIYCGENGDFKYLPR" gene 651800..651895 /locus_tag="L200025" /db_xref="GeneID:1114282" CDS 651800..651895 /locus_tag="L200025" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_835300.1" /db_xref="GI:30024005" /db_xref="GeneID:1114282" /translation="MAKYNQLLRIEDQLAEVAQYKGLKAFYNLKK" gene complement(652010..652681) /gene="ygfA" /locus_tag="L52030" /db_xref="GeneID:1114283" CDS complement(652010..652681) /gene="ygfA" /locus_tag="L52030" /note="transport and binding protein" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="NP_266815.1" /db_xref="GI:15672641" /db_xref="GeneID:1114283" /translation="MKTILKMENVKKSFGSGHNEIQALKGIDLAVNQGEFVSIIGPSG SGKSTFLTIAGGLQSPTSGNISINGLDFTPLSEKKRSKLRFKEIGFILQSSNLIPYLT IEEQFLLIDKINHEKLTSKKGIELLKSLDILDLKDKHPSDLSGGERQRAAIARALFNE PNLILADEPTASLDTEHAYQVVELLRQEAHLKNKATIMVTHDQRMIKNSDSIYKIEDG LLSKI" gene complement(652684..653757) /gene="ygfB" /locus_tag="L52704" /db_xref="GeneID:1114284" CDS complement(652684..653757) /gene="ygfB" /locus_tag="L52704" /note="transport and binding protein" /codon_start=1 /transl_table=11 /product="ABC transporter permease protein" /protein_id="NP_266816.1" /db_xref="GI:15672642" /db_xref="GeneID:1114284" /translation="MFLALREIRYNKARYTLIGAIIFLIAYVVFILSGLSVGLASQFK QAVLDWKAEKVVLSTSSNNIISASQITSDDLSNIHIENGSELSLFSTSMRKSKSERDN IAIIALPDKSKIMPEVLEGKKFTDNHLEMIISKKLANQGYKIGQEVSVGNNNIKIKIV GISKSSSYSASPVIYTSFSALNQIKFGEKSTSTSSVNAVVVKSGKVKIDSSISNQYKV LSISDLINDIPGYSAQNMTLSAMIYFLFLIVLLIIGVFMYVITLQKVPIFGIMKAQGI SNRIIMNSLLGQSFIISLVGVFVAFIASYGTSFILPDAMPFEISLTNWLLYALILIIV SIIGSLFSIITIRKIDPTKAIGG" gene complement(653769..654338) /gene="ygfC" /locus_tag="L53789" /db_xref="GeneID:1114285" CDS complement(653769..654338) /gene="ygfC" /locus_tag="L53789" /note="TetR/AcrR family of transcription regulators" /codon_start=1 /transl_table=11 /product="transcription regulator" /protein_id="NP_266817.1" /db_xref="GI:15672643" /db_xref="GeneID:1114285" /translation="MPKSTYFSLSDEKRNRVYDACLNEFQTHSFHEAKIMHIVKALDI PRGSFYQYFEDLKDAYFYVLSQETLEIHDLFFNLLKDNSIEESLDKYKYLLLENLIDS PQYKLYKYRFLDWTYELERDWKPQSSATVPASENDNPISQVLKSVVHNLVYRLFSENW TEKTFIENYDKEIKLVTEGLLNYITDRKN" gene complement(654526..656049) /gene="fadD" /locus_tag="L54546" /db_xref="GeneID:1114286" CDS complement(654526..656049) /gene="fadD" /locus_tag="L54546" /EC_number="6.2.1.3" /note="fatty acid and phospholipid metabolism" /codon_start=1 /transl_table=11 /product="long-chain acyl-CoA synthetase" /protein_id="NP_266818.1" /db_xref="GI:15672644" /db_xref="GeneID:1114286" /translation="MKFKHEPLNLYLNFKKSAEQFPDSPIIFDEAVGAFPELALETTY QKTHQAIVDKASLLSELGIKKSDKVIIFKSSAFDTYLLAVAVSYLGAVPAMISYHLPA ETMDILAGRLGNPWLIYDQVTDKTVNEMKNLEDSKKLSVSKFALEKPTQIADSQQLAS DEIAYLTHTSGTTGVPKLIAHSANSMGWRWVLQRTVMDWMPDKEEILAFHISPVHSRF NIGVSSAMTFGFGLMPLNDLSKDNLVNLFAKHQPYAFETHPNDFVRLANLAKQEPEIF ASIRYLHSTFDAINKETMHTFLSASKQKDPVFLQIYGQSECGPMIWKKHRLSTLADTN AREMGIGMPGLSKARIADEDGNECPAGTPGRIHFLSKGRALTYYKEEERFNKEVYGDW WDTGDWGLMNEDGILFLHDRQVDLIDKIESNLAIEDLLLDQHDFLDEVVIIRDKSGKP QPILALAENAEMDWSAWWASIVDLPFLNEPILMAYDEIPRTATMKVQRLALERELAK" gene 656294..657157 /gene="ygfE" /locus_tag="L56275" /db_xref="GeneID:1114287" CDS 656294..657157 /gene="ygfE" /locus_tag="L56275" /note="transort and binding protein; cations" /codon_start=1 /transl_table=11 /product="divalent cation transport-related protein" /protein_id="NP_266819.1" /db_xref="GI:15672645" /db_xref="GeneID:1114287" /translation="MKNFTYVLNPTREEIGNISEYYDFPFDYLSGILDDYENARFETD DNDNNLILLQYPALSNYGEVATFPYSLVWTKNESVILALNHEIDNGLIFEREYDYKRY KHQVIFQVMYQMTHTFHDYLRDFRTRRRRLEQGIKNSTKNDQIVDLIAIQASLIYFED ALHNNMQVLQDFIDYLREDDEDGFAEKIYDIFVETDQAYTETKIQLKLLENLRDLFSN IVSNNLNIVMKIMTSATFVLGIPAVIVGFYGMNVPIPGQNFNWMVWLILVLGILLCVW VTWWLHKKDML" gene 657418..659781 /gene="pfl" /locus_tag="L57408" /db_xref="GeneID:1114288" CDS 657418..659781 /gene="pfl" /locus_tag="L57408" /EC_number="2.3.1.54" /experiment="experimental evidence, no additional details recorded" /note="evidence experimental PMID:9294449; energy metabolism; fermentation" /codon_start=1 /transl_table=11 /product="pyruvate-formate lyase" /protein_id="NP_266820.1" /db_xref="GI:15672646" /db_xref="GeneID:1114288" /translation="MKTEVTENIFEQAWDGFKGTNWRDKASVTRFVQENYKPYDGDES FLAGPTERTLKVKKIIEDTKNHYEEVGFPFDTDRVTSIDKIPAGYIDANDKELELIYG MQNSELFRLNFMPRGGLRVAEKILTEHGLSVDPGLHDVLSQTMTSVNDGIFRAYTSAI RKARHAHTVTGLPDAYSRGRIIGVYARLALYGADYLMKEKAKEWDAITEINEENIRLK EEINMQYQALQEVVNFGALYGLDVSRPAMNVKEAIQWVNIAYMAVCRVINGAATSLGR VPIVLDIFAERDLARGTFTEQEIQEFVDDFVLKLRTMKFARAAAYDELYSGDPTFITT SMAGMGNDGRHRVTKMDYRFLNTLDTIGNAPEPNLTVLWDSKLPYSFKRYSMSMSHKH SSIQYEGVETMAKDGYGEMSCISCCVSPLDPENEEGRHNLQYFGARVNVLKAMLTGLN GGYDDVHKDYKVFDIEPVRDEILDYDTVMENFDKSLDWLTDTYVDAMNIIHYMTDKYN YEAVQMAFLPTKVRANMGFGICGFANTVDSLSAIKYAKVKTLRDENGYIYDYEVEGDF PRYGEDDDRADDIAKLVMKMYHEKLASHKLYKNAEATVSLLTITSNVAYSKQTGNSPV HKGVFLNEDGTVNKSKLEFFSPGANPSNKAKGGWLQNLRSLAKLEFKDANDGISLTTQ VSPRALGKTRDEQVDNLVQILDGYFTPGALINGTEFAGQHVNLNVMDLKDVYDKIMRG EDVIVRISGYCVNTKYLTPEQKQELTERVFHEVLSNDDEEVMHTSNI" gene 659913..660572 /gene="coaE" /locus_tag="L59930" /db_xref="GeneID:1114289" CDS 659913..660572 /gene="coaE" /locus_tag="L59930" /EC_number="2.7.1.24" /note="catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis" /codon_start=1 /transl_table=11 /product="dephospho-CoA kinase" /protein_id="NP_266821.1" /db_xref="GI:15672647" /db_xref="GeneID:1114289" /translation="MKMVIGLTGGIASGKSTVVDFLISEGYQVIDADKVVRQLQEPGG KLYKAIVETYGLDFIADNGQLNREKLGALVFSDSKEREKLSNLQDEIIRTELYDRRDD LLKKMTDKSVSKNFDSKSQGKNLSVNKPIFMDIPLLIEYNYTGFDEIWLVSLPEKIQL ERLMARNKFTEEEAKKRISSQMPLSEKQKVADVILDNFGTIEALKKQIQRELARIEEQ K" gene 660575..661792 /gene="pmrA" /locus_tag="L60571" /db_xref="GeneID:1114290" CDS 660575..661792 /gene="pmrA" /locus_tag="L60571" /note="transport and binding protein; multidrug resistance; similar to PmrA of Streptococcus pneumoniae" /codon_start=1 /transl_table=11 /product="multidrug resistance efflux pump" /protein_id="NP_266822.1" /db_xref="GI:15672648" /db_xref="GeneID:1114290" /translation="MNRTKTVNWKRNLFITWIGCFFVGSSFSLVMPFLPLYIQGLGVS GGNVELYSGLAFSLPALASGLVAPIWGRLADEHGRKVMMVRASIVMTLTMGGIAFAPN VWWLLGLRLLMGFFSGYIPNSTAMIASQAPKDKSGYALGTLATAMVSGTLIGPSLGGL LAEWFGMANVFLIVGALLALATLLTIFFVHENFEPIAKGEMLSSKEIINKVSNKQILF GLLVTTFIIQITSQSIEPFVTLYIKTLTTSTNNLMFISGLIVSAVGLSAMLSSSFLGR LGDKYGSHRLILIGLVFTFIIYLPMAFVQSPLQLGILRFLLGFGTGALTPSVNSLLSK ITPKEGVSRIFAYAQMCSNLGMVTGPLVGSAIAGYISYRAAIVGTSLFVIVNIIWSFI NFRKYLRKRSIME" gene 661789..661935 /gene="rpmG" /locus_tag="L0427" /db_xref="GeneID:1114291" CDS 661789..661935 /gene="rpmG" /locus_tag="L0427" /note="in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L33" /protein_id="NP_266823.1" /db_xref="GI:15672649" /db_xref="GeneID:1114291" /translation="MRVKITLICSSCGNKNYISSKNKATHPEKVETMKFCPKERIVTL HREG" gene 662276..663538 /gene="ftsW1" /locus_tag="L62179" /db_xref="GeneID:1114292" CDS 662276..663538 /gene="ftsW1" /locus_tag="L62179" /note="cell division protein; similar to putative cell division protein FtsW of Enterococcus hirae" /codon_start=1 /transl_table=11 /product="FtsW1" /protein_id="NP_266824.1" /db_xref="GI:15672650" /db_xref="GeneID:1114292" /translation="MNLNKNNFLNYSILIPYLILAGIGIVMVFSTTVPDQLQKGLNPY KLVINQTAFELLSLIMIAVIYRLKLRALKNRKMIGTIMVILILSLIFCRIMPSSFALT APVNGARGWIHIPGIGTVQPAEFAKVFIIWYLASVFSTKQEEIEKRDINEIFKGKTLF QKLFGGWRLPVVAILLVDLIMPDLGNTLIIAAVALIMIGASGISWRWYSGYSKLILSL MAIFLGFLFIVGGNIIPSFLPITYINKRFEAFVNPFTDLANSGHQLANSYYAIVNGGW TGRGLGNSIQKNGFLPEAQTDFIFPIVVEELGIIGGIIILAILFFLISRMLIVGIRAK SAFNSLIMIGVSGLLLVQVFVNVGGAIGIIPETGVTFPFLSQGGSSFLGLSLGIAFAL NISADEKRREVSELSNHYSSSVPTYEND" gene 663644..667057 /gene="pycA" /locus_tag="L63652" /db_xref="GeneID:1114293" CDS 663644..667057 /gene="pycA" /locus_tag="L63652" /EC_number="6.4.1.1" /note="biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate" /codon_start=1 /transl_table=11 /product="pyruvate carboxylase" /protein_id="NP_266825.1" /db_xref="GI:15672651" /db_xref="GeneID:1114293" /translation="MKKLLVANRGEIAVRVFRACNELGLSTVAVYAREDEYSVHRFKA DESYLIGQGKKPIDAYLDIDDIIRVALESGADAIHPGYGLLSENLEFATKVRAAGLVF VGPELHHLDIFGDKIKAKAAADEAKVPGIPGTNGAVDIDGALEFAKTYGYPVMIKAAL GGGGRGMRVASNDAEMHDGYARAKSEAIGAFGSGEIYVEKYIENPKHIEVQILGDSHG NIIHLHERDCSVQRRNQKVIEIAPAVGLSLDFRNEICEAAVKLCKNVGYVNAGTVEFL VKDDKFYFIEVNPRVQVEHTITELITGVDIVQAQILIAQGKDLHREIGLPAQSEIPLL GSAIQCRITTEDPQNGFLPDTGKIDTYRSPGGFGVRLDVGNAYAGYEVTPYFDSLLVK VCTFANEFSDTVRKMDRVLHEFRIRGVKTNIPFLINVIANENFTSGQATTTFIDNTPS LFNFPHLRDRGTKTLHYLSMITVNGFPGIENTEKRHFEEPRQPLLNLEKKKTAKNILD EQGADAVVDYVKNTKEVLLTDTTLRDAHQSLLATRLRLQDMKGIAQAIDQGLPELFSA EMWGGATFDVAYRFLNESPWYRLRKLRKLMPNTMFQMLFRGSNAVGYQNYPDNVIEEF IRVAAHEGIDVFRIFDSLNWLPQMEKSIQAVRDNGKIAEATICYTGDILDPSRPKYNI QYYKDLAKELEATGAHILAVKDMAGLLKPQAAYRLISELKDTVDLPIHLHTHDTSGNG IITYSGATQAGVDIIDVATASLAGGTSQPSMQSIYYALEHGPRHASINVKNAEQIDHY WEDVRKYYAPFEAGITSPQTEVYMHEMPGGQYTNLKSQAAAVGLGHRFDEIKQMYRKV NMMFGDIIKVTPSSKVVGDMALFMIQNDLTEEDVYARGNELNFPESVVSFFRGDLGQP VGGFPEELQKIIVKDKAVITDRPGLHAEKVDFETVKADLEQKIGYEPGDHEVISYIMY PQVFLDYQKMQREFGAVTLLDTPTFLHGMRLNEKIEVQIEKGKTLSIRLDEIGEPDLA GNRVLFFNLNGQRREVVINDQSVQTQVVAKRKAETGNPNQIGATMPGSVLEILVKAGD KVQKGQALMVTEAMKMETTIEAPFDGEIVDLHVVKGEAIQTQDLLIEIN" gene 667208..668506 /gene="gltA" /locus_tag="L67186" /db_xref="GeneID:1114294" CDS 667208..668506 /gene="gltA" /locus_tag="L67186" /EC_number="2.3.3.5" /note="catalyzes the formation of citrate from acetyl-CoA and oxaloacetate" /codon_start=1 /transl_table=11 /product="citrate synthase" /protein_id="NP_266826.2" /db_xref="GI:161723238" /db_xref="GeneID:1114294" /translation="MIKNSQIPSEFYKKYNVKKGLRDINGKGVLAGLTNISAIHSFDK EGNQIPGILEYRAYNIKDIINDLRKENRFGFEEMTYLLLFGELPTANELQEFQNLLAS RRTLPEFFIRETILTNPSSDVMNSMSRCILALASYDEKVSDISIENVLEQSFGLIADF PLLAIYSYQSYVHYFKKESLYIHYPDPKMTTAENILRMLRPDCHYTEVEAKVLDIALI LHMEHGGGNNSTFTTHVVTSSGTDTYATIAAALSSLKGPKHGGANIKAAKMLENIKEN ISNYEDDAEIEKYLHKILNKEVFDKQGLIYGIGHAIYSLSDPRFEVFKSYVETLVKEK GLEEEFKLYEKVARLAPKVISENRKIYKTICPNVDFYSGFVYRILEIPQELFTPLFAI ARIVGWLAHRIEELINMNKIIRPAYESVLESKNYIKLGER" gene 668503..671049 /gene="citB" /locus_tag="L68478" /db_xref="GeneID:1114295" CDS 668503..671049 /gene="citB" /locus_tag="L68478" /EC_number="4.2.1.3" /note="Catalyzes the conversion of citrate to isocitrate" /codon_start=1 /transl_table=11 /product="aconitate hydratase" /protein_id="NP_266827.1" /db_xref="GI:15672653" /db_xref="GeneID:1114295" /translation="MKKISISKKIYHYYDISETERIEDFPYSLRVLLESLIRQKNDEN INQAHIQSVKDYLKGEVGQETVFLPSRVVLQDFTGVPAIVDLAAMRDAMVELGKNPEL INPEIPVDLVIDHSVQVDFQGNEEAFLLNSKKEFERNRERYEFLKWAEQSFDNFRVVP PATGIIHQVNIEYLSEVITEKNGVLYPDSVFGTDSHTTMINALGVLGWGVGGIEAEAV MLGEPSSLTVPEVVGVRLIGKLGAFATATDLALTITKILRDEKVVGKFVDFFGEGLKN LSLADRATISNMAPEYGATCGYFPIDNETLKYLRATNRSEEVVARVETYAKANKLFYD EKREPYYNKTINVDLSEVATRLSGPSRPQDMLELSELANNFEDFAKKQKPLKEEDGKI AIAAITSCTNTSNPHVMMMAGLLAKNAVEQGLTVPSWVKTSLAPGSKVVTSYLEKAGL LPYLETLGFYVVGYGCTTCIGNSGPLLSEMETEIRNKELIATSVLSGNRNFEGRIHPL VKANYLASPPLVVAYALACSVRKNLTTGALGTNLEGEKVYLKDILPTSDEVNDLVQKY VTSDLYAESYAKVFDENTVWNNIKTKKSEVYDWKSESTYISNPPYFENLTMINKPIAS LSNLHVLAKFGDSITTHHISPAGNIPLKSPAGDYLSSRGLAYKDFNSFGSRRGNDKVM TRGTFANIRIKNQLVAPLEGGYSLFNNETLPIYEVAKKYKEQGQGLIVLAGKDYGMGS SRDWAAKGTKLLGVKAVIAESFERIHRSNLVMMGVLPLQFLDNENAETLGLSGYESFS IELPENPKIHEKITVSTAEKNFEVLLRFDSQADLDYYANDGIMPYVIRKK" gene 671070..672308 /gene="icd" /locus_tag="L71075" /db_xref="GeneID:1114296" CDS 671070..672308 /gene="icd" /locus_tag="L71075" /EC_number="1.1.1.42" /note="TCA cycle; glutamate synthesis" /codon_start=1 /transl_table=11 /product="isocitrate dehydrogenase" /protein_id="NP_266828.1" /db_xref="GI:15672654" /db_xref="GeneID:1114296" /translation="MKIEMKNGKLVVPDYPAIGYIRGDGVGEDIFPQAQKVFDAAVLK IYGQKKKIEWQKLLAGGEAFETCGEYLPKETLAHINENLIAIKGPLMTPVGESFRSIN VTLRQKMDLYACVRPVEYFKGIKSPVKAPEKVDMTIFRENTEDIYAGIEFASETNESH NLLKFLEKELNVHSIRFPKTSALGIKPVSPEGSKRLVNAAFEYALKMNKKRVTFVHKG NIMKFTEGGFRNWAYEVAREYPTFTKLEYDEIKNERGSLQAENEKKAALKSGKIYVDD VIADNFLQQIILNPENFEVIATLNLNGDYISDALAAQVGGIGIAPGANINYKSGHAIF EATHGTAPDIAGKNIANPSSLILSGVMMFEYLGWQEVAELIKIALSFSFRNGNLTADL GGKLSTSKFSDVLIDFIKTY" gene complement(672374..672973) /gene="clpP" /locus_tag="L72391" /db_xref="GeneID:1114297" CDS complement(672374..672973) /gene="clpP" /locus_tag="L72391" /EC_number="3.4.21.92" /note="hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates" /codon_start=1 /transl_table=11 /product="ATP-dependent Clp protease proteolytic subunit" /protein_id="NP_266829.1" /db_xref="GI:15672655" /db_xref="GeneID:1114297" /translation="MGYLVPTVIEQSSRGERAYDIYSRLLKDRIIMLTGPVEDGMANS IIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMNFIKSDVQTIVMGMAASMGT IIASSGTKGKRFMLPNAEYLIHQPMGGTGQGTQQTDMAIVAEQLLKTRKRLEQILADN SNRSLEQIHKDAERDHWMDAKETLEYGFIDEIMENNSLK" gene 673194..673700 /gene="yghB" /locus_tag="L73160" /db_xref="GeneID:1114298" CDS 673194..673700 /gene="yghB" /locus_tag="L73160" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266830.1" /db_xref="GI:15672656" /db_xref="GeneID:1114298" /translation="MIFGLIIGAWLMVAGIYIYKIYDENRYKKRLTIEKLLREIEVRN TLNQKVIEILNRPITGSDKELINPQSDVKVPFYDYNFLKNYTSMYNLYIPTYFLNTFF KKLSHHLAVFDDEQDLKNGGYIFKESRTIFENFSVEITDDIEAKKRELQKAKNVYPSM LKKQHYNI" gene 673860..674258 /gene="spxA" /locus_tag="L73853" /gene_synonym="yjbD" /db_xref="GeneID:1114299" CDS 673860..674258 /gene="spxA" /locus_tag="L73853" /gene_synonym="yjbD" /note="the anti-alpha factor Spx interacts with RNA polymerase alpha subunit C-terminal domain in a region that interacts with the sigma 70 subunit and may interfere with activation of promoters; in Bacillus subtilis this protein is a substrate for ClpXP protease; blocks transcription of the competence regulatory gene encoded by the srf operon; regulates a number of genes involved in thiol homeostasis including trxA and trxB; monomeric member of ArsC family of proteins; does not bind DNA; contains a disulfide bond between C10 and C13 which may sense disulfide stress" /codon_start=1 /transl_table=11 /product="transcriptional regulator Spx" /protein_id="NP_266831.1" /db_xref="GI:15672657" /db_xref="GeneID:1114299" /translation="MITIYTAPSCTSCKKAKTWLSYHHIPFNERNLIADPLSTTEISQ ILQKCDDGVEGLISSRNRFVKTLGVDFEDISLSQAIKIISENPQIMRRPIIMDEKRLH VGYNEEEIRAFLPRTVRVLENGGARLRSAI" gene complement(674640..675608) /gene="yghD" /locus_tag="L74660" /db_xref="GeneID:1114300" CDS complement(674640..675608) /gene="yghD" /locus_tag="L74660" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266832.1" /db_xref="GI:15672658" /db_xref="GeneID:1114300" /translation="MLIFLSTNHPQIAFTGSRHLSVASLSIILSTLFGFFGFIWTYLR KSCDLSKSKFKIFRETLTLSVAYTSISFAVQIIFWYIIGKTFSGVTFDPFTAGFLVLV FVGIIFYFLISAALSITLPNLILLLFTTFIGGILVSMATNNQKDWWQHNFSFLGTGEA TQHWQFNITLIFSALILLTITDFLFAEFSKSSLYNYKFKIIRIFYILIAFLIAFVGIF PAQSWTMPIHNNSAFGLVAVVLIMIIFLKWLVPTISKEFLALSWTALIALILSAVAFM GIHYLSLTVFEIIAFAIAFTWLVMFINSLRGIIQEGNEWQVKLLQK" gene complement(675656..675853) /gene="yghE" /locus_tag="L75676" /db_xref="GeneID:1114301" CDS complement(675656..675853) /gene="yghE" /locus_tag="L75676" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266833.1" /db_xref="GI:15672659" /db_xref="GeneID:1114301" /translation="MYYKNEFIHYFKARKNIMTKNYLEIPEELYNKLSDYAENDQLSI RLENQQILLENPKINHTNKKI" gene 676147..678903 /gene="pacL" /locus_tag="L76107" /db_xref="GeneID:1114302" CDS 676147..678903 /gene="pacL" /locus_tag="L76107" /note="transort and binding protein, cations" /codon_start=1 /transl_table=11 /product="cation-transporting ATPase" /protein_id="NP_266834.1" /db_xref="GI:15672660" /db_xref="GeneID:1114302" /translation="MKFYQKSKEELLHSYDVKIDRGLSSTQVTDNRERYGENKLPEEK EESYLKVFFKSFKEPIIIVLLGAVALSFFSSFYSFQIVGDKKHGLESLYEAIAIAILI IINAFLGFWQEISARKNLNSLKEMNNRFASVLRDGALEKISSNELVVGDIVKVTVGDF VEADIRWLELDELQLIESHLTGEADAIIKNIEVINENVEIGDQTNMGFSGSIVSNGQG IGIVVATGENTELGKISQLMKDEGIKSSPLQETVKKLTKTLMKISAGIVLLTFVFGLI SSGEFSINSITSVFSTSIALAVASIPDALPVVLSIVLTIGAVKMSKNKGLIKTLSSVE TLGSTSYICSDKTGTLTQNEMTVTKFYANGQLYNVDGLGYSSIGEIHLIAKGEKNINF AQFMKNIVLCNDSSVKEVEGQVKTFGNPTEVALTVLGSKAGYSKNKLLKNNKIIRTLP FSSSRKMMSVIVQNDEGFYVYTKGAPDVLMEKASGILIGDIVDQSEQSKDNFIKVVDD YADEALRTLAVAYKKVDEEEALYGATEDVEKDFILTGVAGIIDPPREEVKESIRQLHD ANINVVMITGDHEKTARAIAYDLGIVKEKNATVLKGIDLEEMSDQKLYAEVKNVNVYA RVTPEHKQRIVKQLQNHQQVVAMTGDGVNDAPALRAADIGVAMGITGTEVTKDSADLI LLDDKFTTIEKSVYSGRTIYANIKNFMRHELTTNVAEVLALVLGLVLFRSSVGNVAAM TPTLTALMVLWVNMVSDAIPSFSLGYDVAETDLMKEKPRNPNESILANHTWSRVLIRG TVMGTMVYLGFLLAAQNGLNASEAQTVAFLTLVYGQLWHVFDARSSRTLFRRNPFGNI RLVGAVLFAGVSSFLVTIIPFFNSVMGTAQLTLPVYLLVIFIPALPTLILSGIKEVFK IKIW" gene 679391..680422 /gene="yghG" /locus_tag="L79351" /db_xref="GeneID:1114303" CDS 679391..680422 /gene="yghG" /locus_tag="L79351" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266835.1" /db_xref="GI:15672661" /db_xref="GeneID:1114303" /translation="MKRNSSIDLMKSCAIFFVISVHFLLNSGFYDMTIHSTLAIFWIG IRTILITCVPLFLVATGFLMNRKELSAQYVLGIVPVIISYIGISLLVWGVLSLVGKGS DFSTAINGIFDYSTDSYSWYVEMYLGLYLFIPLLNIIWNYKKEIKNYHLYIVFIASLL TFLPSLLNSFGKVIPDYWQICYPVSYYFIGAYLYTYQNEIKKISIGKLVTAFLSALTI FTLTDTFASWNQEFQWLDHNDYFGYQTAIMTVLVIAILWRTPIPKWSVRLLKALSTAT LTIYLISDLTDQFVYGFFKHEIPNLSQRVIAGPIIIPVAFTSAALLGIFVGKVLNIPF KRKKERKEN" gene 680427..681491 /gene="icaA" /locus_tag="L80399" /db_xref="GeneID:1114304" CDS 680427..681491 /gene="icaA" /locus_tag="L80399" /note="surface polysaccharides, lipopolysaccharides and antigens; similar to intercellular adhesion locus protein IcaA of Staphylococcus epidermidis" /codon_start=1 /transl_table=11 /product="glycosyl transferase" /protein_id="NP_266836.1" /db_xref="GI:15672662" /db_xref="GeneID:1114304" /translation="MLISTMVDVYVVYYPIILSFIWASGAFLSRWKERDKKAIDETKE FEKISIVISAYNEEETIEEVLLSLRNLNYPSLEIFIVDDKSSDRTLEKLYEVKKSFDD WETLTILEQKENKGKATALNVALQQVNSKYMLVIDADSYLSKDALSYLLAELTSSSDI GAVTGRPIVRNRTTLLGKLQTLEYLSVIDAIKRAQSLFLGAIMTVSGVIVMYRVEALK EIGGFNTEVMTEDIDVTWRLHRNQWKVKYVPKALSYILVPENLKSLLKQRRRWAVGGV EVLISNLSWVFKRGEFKHRFLLIEMICSHIWSWFFLIESYQYFLQMLLNQEFKVSGQI IVIFVLISFFVFFLGPQIVK" gene 681575..682522 /gene="tra983A" /locus_tag="L0443" /db_xref="GeneID:1114305" CDS 681575..682522 /gene="tra983A" /locus_tag="L0443" /note="transposon related function; belongs to the IS30 family of transposase" /codon_start=1 /transl_table=11 /product="transposase of IS983A" /protein_id="NP_266837.1" /db_xref="GI:15672663" /db_xref="GeneID:1114305" /translation="MQDYSITSQSKGKHLTNQDRLNIERWHNKEGLSNREIARLLNKA HGTIDREMKRGEIQLKRKVKYSAKKAQENYEGLRAHSVRPSKLTTEIDCYVSTRLKED KDSLEVIHQALKGVSLSSLYNWVNWGWLEAKRHHLFYPQYKAAKKIKPRAPKHPFGKS IEERPEFINNRLEVGHYEIDTVILTRAKNKVLLTLTERKYRTEIIRLIDGKTAQAVND ELVELQKSYDFKSITPDNGHEFARLSEVVSCPVYYAHAYASFERGTNENHNRMIRRHL PKGTTKTTPEEVAAIEYWMNHYPRKMFNYKSSYEMSLAG" gene 682537..683367 /gene="icaB" /locus_tag="L82521" /db_xref="GeneID:1114306" CDS 682537..683367 /gene="icaB" /locus_tag="L82521" /note="surface polysaccharides, lipopolysaccharides and antigens; similar to intercellular adhesion locus protein IcaB of Staphylococcus epidermidis" /codon_start=1 /transl_table=11 /product="intercellular adhesion protein" /protein_id="NP_266838.1" /db_xref="GI:15672664" /db_xref="GeneID:1114306" /translation="MRSTRETKKYVKDGKKEQPDFAYESLLKDNDGIIVLCYHRVLKD TVVTNFAYSISHNSQLHEYNVFLQDFEQQMTFLKKNHIKVLTSSELIEKLNKKEVIGK AVVITFDDIDKSLPENAYPIMKKLDLPFTQFIITGKVGQTIDGSQMSTWKEIKKMNEN PLVTSGLHTNDLHYQENFEPILSTNISKKVVQKDYQKSQKAFDEKLDQKGKVFAYPYG AQNKDLEDYMLQDGIQGIFTLSPGVVTNETLYSNIPRLIVTKDNWKTIKHWLLSEGTQ" gene 683394..683639 /gene="ygiC" /locus_tag="L83372" /db_xref="GeneID:1114307" CDS 683394..683639 /gene="ygiC" /locus_tag="L83372" /note="similar to peptidoglycan bound protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266839.1" /db_xref="GI:15672665" /db_xref="GeneID:1114307" /translation="MKAKNKSFKLLMVLSLLMCLVGINLFTTSNVFAADYGNKFITGH ELTDDLGNPKTDFGIYDDVQAHWDFDIPVGSVSQGIQ" gene 683636..684646 /gene="icaC" /locus_tag="L83620" /db_xref="GeneID:1114308" CDS 683636..684646 /gene="icaC" /locus_tag="L83620" /note="surface polysaccharides, lipopolysaccharides and antigens; mediates attachement of cells to collagen containing substrates" /codon_start=1 /transl_table=11 /product="collagen adhesin" /protein_id="NP_266840.1" /db_xref="GI:15672666" /db_xref="GeneID:1114308" /translation="MSVNVPDLLTLSKDITFEIKDEAGNIIGTAVANHLTGVVTVTFL KLVENATSDIKGSFSVWVNWDEQKVEEDTRVVVDWKDGGTTEVNIGPATGPDKDEVLY KWGWVDENDSTLIHWQVRINYAKENIQKAIYTDIIGGNQNLVSGSISVANVTYSSDGE NYNVDSYYPQASILENGVNGFTVNLGDISNTIIIDYSTRATDGGLSQQYENRGELTGE NIEKQVVEVHTPNNGGNGNASMKLSISGEKTWINDNNARGLRPSFISIELYRNGEKVD SRDVTAKENWKYSFTNLDKYDESGKLYDYDVKEVSVSNYTSQQEGYNFINTIIPVKEE TP" gene 685386..685387 /gene="brnQ" /locus_tag="L200026" /note="branched-chain amino acid transporter; transport and binding protein; amino acids, peptides and amines; may contain a frameshift mutation" /db_xref="GeneID:1114309" gene complement(686532..686849) /gene="ygiG" /locus_tag="L86554" /db_xref="GeneID:1114310" CDS complement(686532..686849) /gene="ygiG" /locus_tag="L86554" /note="probably ATPase with chaperone activity, ATP-binding domain, evidenced by COGnitor" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266841.1" /db_xref="GI:15672667" /db_xref="GeneID:1114310" /translation="MPIRSTKIFGEGKKLMNIIERENLFELLSDKGEVIGEMPYMPMN NSIIITHTGVSLDYRGQGLAEKLVLAGIQKARREQLKLGATCPYAVKYFREHKEELTD VLK" gene complement(686804..687118) /gene="ygiH" /locus_tag="L86826" /db_xref="GeneID:1114311" CDS complement(686804..687118) /gene="ygiH" /locus_tag="L86826" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266842.1" /db_xref="GI:15672668" /db_xref="GeneID:1114311" /translation="MSYKKNTIVNRRKKMDNSKLFGEAANEEQLLKNNYRKYRGENMD IYYNVAICEHAGECVRGNPLVFEVGRKPWIIPDNGDVASNQSVINRCPSGALKYLAKE KN" gene 687395..688168 /gene="ygiI" /locus_tag="L87336" /db_xref="GeneID:1114312" CDS 687395..688168 /gene="ygiI" /locus_tag="L87336" /note="hydrolase of PHP superfamily" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266843.1" /db_xref="GI:15672669" /db_xref="GeneID:1114312" /translation="MEIFDTHTHLNTSEFEGRIQDELVQAQTFGVTRINNVGSNYESN DAALLLAEKFEECYATIGWHPDDAAEFDDQAENYLLTKLSAKKVIALGEIGLDYHWMV RPKEEQERVFRRQIQISKEMGLPFQVHTRDALDDTYEIIKSEGVGPAGAIMHSFSGTA DEALKFVELGMMISFSGVVTFKKALDVQEAAATVPLDKILVETDAPYLTPMPYRGKEN RPAYTKFIVEKIAELREISADEVAKATTENALRIFGLKK" gene 688206..688739 /gene="ygiJ" /locus_tag="L88237" /db_xref="GeneID:1114313" CDS 688206..688739 /gene="ygiJ" /locus_tag="L88237" /note="similar to Listeria monocytogenes FlaR" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266844.1" /db_xref="GI:15672670" /db_xref="GeneID:1114313" /translation="MKIMIIGSSGSGKSTFARELGKITSYPILHLDKVFHKYPSEIAR EKLREATRIFIFQNENVIIDGNYGSTLDERLPFADEVIWLKTPRLKTTFRVIKRSIKS RVFGKNRPDIAEEFKEKWDKEYLEFLKFVWTFPEKEFPQIEQKIKEFNVESKVIILKN RKDKEKYLANYGRKAKN" gene 688717..689337 /gene="ygiK" /locus_tag="L88730" /db_xref="GeneID:1114314" CDS 688717..689337 /gene="ygiK" /locus_tag="L88730" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266845.1" /db_xref="GI:15672671" /db_xref="GeneID:1114314" /translation="MVEKQKINEVIVVEGRDDTANLKRYFDCETYETGGSSIDDRDLE RLKRLEDKRGIIVFTDPDFQGERIRKIIMQAVPNAKHAFLNRDEARPKGKGSLGVEHA NFEALNQALAEVFGGEKVTDEFGSAKTQEPSSDRSSVSKKELLTELTQTDLMSFGLVM AADSRKRREFLCEQLRIGYANGKQIKKRLNMFKITKEQIENVMKNY" gene 689448..690332 /gene="ksgA" /locus_tag="L0363" /db_xref="GeneID:1114315" CDS 689448..690332 /gene="ksgA" /locus_tag="L0363" /note="catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin" /codon_start=1 /transl_table=11 /product="dimethyladenosine transferase" /protein_id="NP_266846.1" /db_xref="GI:15672672" /db_xref="GeneID:1114315" /translation="MTENNIDRISNIIRTQDILRRHDFNFKKKFGQNFLTDHNILTKI TQTAELSKEVNVIEIGPGIGSLTQYLLEEAAEVMAFEIDKSLIPILEETMAPYDNFTL VSADILKVDLLSEIQKFKNPNLPIKVVANLPYYITTPILMHLIESKIPFSEFVVMMQK EVADRIAASPKTKAYGSLSIAVQYYMEASVAFIVPRTVFIPAPNVDSAILKMVRREAP LVEVEDEEWFFKTMHSSFVHRRKTLMNNLQAAFGKESKPEIEKLLAQAEISPTIRGEA LSIEEFAKLADALLPLKK" gene 690433..691491 /gene="pepP" /locus_tag="L90422" /db_xref="GeneID:1114316" CDS 690433..691491 /gene="pepP" /locus_tag="L90422" /experiment="experimental evidence, no additional details recorded" /note="evidence experimental PMID:9797327; degradation of proteins, peptides, and glycopeptides" /codon_start=1 /transl_table=11 /product="aminopeptidase P" /protein_id="NP_266847.1" /db_xref="GI:15672673" /db_xref="GeneID:1114316" /translation="MRIEKLKAKMLTENIDSLLITDMKNIFYLTGFSGTAGTVFLTAK RNIFMTDSRYSEMARGLISDFEIIETRDPISLLTDLSASESIKNIAFEETVDYAFFKR LSDATPGLELLATSNFVLELRQFKDDTEIDLIKKACAIADEAFMSALKFIEPGRTEIE VANFLDFKMRDLEASGISFETIVASGKRSSLPHGVATSKMIQFGDPVTIDFGCYYEHY ASDMTRTIFVGSVDDKMRTIYETVRKANEALIKEVKAGMTYAEYDKVPRTVIEEANFG QYFTHGIGHGLGLDVHEIPYFNQSMTENHLEAGMVITDEPGIYIPEFGGVRIEDDLLV TENGCEVLTKAPKELIVI" gene 691623..692180 /gene="efp" /locus_tag="L0377" /db_xref="GeneID:1114317" CDS 691623..692180 /gene="efp" /locus_tag="L0377" /note="Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA" /codon_start=1 /transl_table=11 /product="elongation factor P" /protein_id="NP_266848.1" /db_xref="GI:15672674" /db_xref="GeneID:1114317" /translation="MVLAKDLKSGMTFLNGEKLLRVMEASHHKPGKGNTIMRMKLKDV RSGSTFDDTYRPEDKFEQAVIETVTAQYLYSMDGIANFMNNETYEQYEIPVEQVKDEL LYVLENTDVKIQFYGTEVIGIQLPTTVVLEVTETQPSIKGATVTGSGKPATMETGLVV NVPDFVEAGTKLEINTQTGEYLKRA" gene 692276..692728 /gene="ygjB" /locus_tag="L92295" /db_xref="GeneID:1114318" CDS 692276..692728 /gene="ygjB" /locus_tag="L92295" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266849.1" /db_xref="GI:15672675" /db_xref="GeneID:1114318" /translation="MKFFQLEKFAKTKGEIKMAEKTVHSEELGDIVIAPEVLEVIIGI TTAKIDGVHALRNKRFSDRLGKKNEGRGVYIDSKDDKVAVDIYVYLTYGVSLPAVATK IQKEVKEAVAQATEIIVDEVNIHVVGIMTEKQPKPALEDLFDEGFFDA" gene 692721..693692 /gene="nusB" /locus_tag="L92686" /db_xref="GeneID:1114319" CDS 692721..693692 /gene="nusB" /locus_tag="L92686" /note="transcription termination protein; RNA synthesis, modification, and DNA transcription" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266850.1" /db_xref="GI:15672676" /db_xref="GeneID:1114319" /translation="MPKTLTQHQIRQRAVQVLFSYAVQKEMATNVVSSFRENVEKLEE ELSQTVRFDVDFRDERITVRKFPKGLSQPLEAIYEIYEILGLKDIEKTTVAKALAFMR DFGGYAKKMNEYEATNLFVGVMANLKLIRLFQIELDEEPVAPKVLEFFKNLPENATAE QSLETFQKTFSFLHENVLEKYTSDLFTPSTLKEELDEQLAQAENNAQSQLSELLKNTK RFVLNYDNDRPEDLEAPEYFTQLVDGVLDKKEDLEANISKYLTKTWSFSRLTLVEQAI LQVSSYEILYTETPDVVAVNEAVELSKDFSDEKSSRFINGVLTNFLK" gene 693909..694385 /gene="ygjD" /locus_tag="L93919" /db_xref="GeneID:1114320" CDS 693909..694385 /gene="ygjD" /locus_tag="L93919" /note="energy metabolism, sugars; similar to N-terminal parts of the 4-alpha-glucanotransferases from different species. C-terminal part is presented in Lactococcus lactis by a separate protein (YgjD)" /codon_start=1 /transl_table=11 /product="4-alpha-glucanotransferase" /protein_id="NP_266851.1" /db_xref="GI:15672677" /db_xref="GeneID:1114320" /translation="MLTNNFSIEPYGKKAYHTGIAVPVFSLRTENSSGVGQFSDLKEL ADFAHRSGMDIIQLLPINDTSTFMDWRDSYPYRAISVFALHPIYLDIHIFWDSYTKIQ QEKLLIAELELNALEKIDYEKALALKWEYAEIIYQNSAHKFKASKDYQQFYQQNED" gene 694443..695912 /gene="malQ" /locus_tag="L94405" /db_xref="GeneID:1114321" CDS 694443..695912 /gene="malQ" /locus_tag="L94405" /EC_number="2.4.1.25" /note="energy metabolism, sugars; N-terminal part is presented in Lactococcus lactis by a separate protein (YgjD)" /codon_start=1 /transl_table=11 /product="4-alpha-glucanotransferase" /protein_id="NP_266852.1" /db_xref="GI:15672678" /db_xref="GeneID:1114321" /translation="MNWGKYATYSEDFFEKLTSESNQLDLYIFVQYLLHYQLSEAVDY CHQLGIALKGDIAIGIAHDSVDAWTHPELFHLDKQAGAPPDIFAVNGQNWGFPTYNWK KMAEDGYAWWKKRLTAMSNYFDAYRLDHILGFFRIWQMPEDSVRGLLGQFSPAIALSA EEIENSYGIPLRQWGLERFINPFIKDWVIDEIFGRDNRDWIIQTFLDYIGNGNYTFQN EYNNQKKVEKAQLEDWVREGLYKLHENIILLKDDENPEKYHPRISLIQTISFREFGDD YKGRLEKLYNDYFYGRNYEFWKEKAYEKLPVLKDATNMLACGEDLGMVPANVPDVMNH LNILRLIIERMPSDNRFVSPLNEVPYLSVLTTSSHDTSPLRAWWEENHEEIQRYYNEV MGWYGEAPYYASAEIIQEIVKRHLNSNAMMVILPIQDWLAMSEQLRKEDAKSEQINIP ANPYHYWNYRLHCQLETLIDNQDWTEFLKKFIKESKRAY" gene 696013..697155 /gene="glgC" /locus_tag="L95975" /db_xref="GeneID:1114322" CDS 696013..697155 /gene="glgC" /locus_tag="L95975" /EC_number="2.7.7.27" /note="catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate" /codon_start=1 /transl_table=11 /product="glucose-1-phosphate adenylyltransferase" /protein_id="NP_266853.1" /db_xref="GI:15672679" /db_xref="GeneID:1114322" /translation="MAIEMLGLILAGGQGTRLGKLTKDVAKPAVPFGGRYRIIDFALS NCANSNVKNVGVITQYQPLTLNAHIGNGAPWGLNGINSGVTILQPYSSQEGSKWFEGT SHAVYQNISYIDQQNPEYVLILSGDHIYKMDYEAMLESHKEREASLTVSVMEVPLEEA SRFGIMNTDDNDRIIEFEEKPKEPKSNLASMGIYIFNWKRLREVLVNGYSKGNPMEDF GGDVIPAYIEAGENVFAYRFKGYWKDVGTIDSLHQSSMEFLDLNNELNITDKSWRIYS HNDISAPQFITEKSNVKNALVGDGCYVDGTVLHSILSQNVHVQEGTVIEDSFIMSGTF IGENVTIKNAIIGENAKIGDNVEIIGENEVAVIGHGEIKGENKNEQ" gene 697145..698284 /gene="glgD" /locus_tag="L97131" /db_xref="GeneID:1114323" CDS 697145..698284 /gene="glgD" /locus_tag="L97131" /EC_number="2.7.7.27" /note="central intermediary metabolism; subunit of ADP-glucose pyrophosphorylase" /codon_start=1 /transl_table=11 /product="glucose-1-phosphate adenylyltransferase" /protein_id="NP_266854.1" /db_xref="GI:15672680" /db_xref="GeneID:1114323" /translation="MNNSNKMAAILSNISSSKHLSPLTEVRPIATLPFDCKYHLIDFP LSSLSNAHVDNIFMTFNEGETQSVFDHLGSGGEWGLDGFNSRYFVYIQQDFDRLREQG KDYFAQQLNFLRKSKAPYTVLLGSKFICNVDLTAVLKIHKLAGKEITTVYKKVSPDLA SEYDTILRFDESGKMSNCYVNQLENPQEKEALCLNLFIVNTDWLINFIKEMQDIGELT SIARLIRVYMKNYDVNTYEYTGYMSNITNIKSFYDANMVMLDPQNFTSLLYSSQPVYT KIKNEVPTYFSENSKVENSQLGSGCIINGKVKNSLISRGVKIQDDALIEESLVFTNSE VKSGAQVKFAIIDKGVVVENNVKIIGSSEKPVVIPKGTVVTADIL" gene 698361..699812 /gene="glgA" /locus_tag="L98347" /db_xref="GeneID:1114324" CDS 698361..699812 /gene="glgA" /locus_tag="L98347" /EC_number="2.4.1.21" /note="catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose" /codon_start=1 /transl_table=11 /product="glycogen synthase" /protein_id="NP_266855.1" /db_xref="GI:15672681" /db_xref="GeneID:1114324" /translation="MKERKMKVLFASSECAPFFKTGGLGDVAGALPKELAKKSEIDSV AVILPYFKNEMKEEYRSLLKDEFYDFVDVGWRHEYVGVKSLEKEGVKYYFLDNEHYFG RGQLYGYGDDGERFAFFDLALCQLLEKLDFIPDVLHVNDWQTAMVPFLLKEKYNWIKA YEKIKTVLTIHNIEFQGLMHGDALSELFGMGMERYFEGVVRHNGMLNMLKTGILYADR VNTVSPTYAKEIQTSEFGCGLESILQYVDGKVSGILNGIDYDIYNPENDILIPYHFSE EELSGKGQMKAELQKRTGLPLNPNVPLIGMVSRLTNQKGFDLVLSQLEKVLEENVQIV LLGTGFPEIEEGFRYFSQKYPDKLSANIAFDIQFAQEIYAGSDFFLMPSAFEPCGLSQ MIAMRYGTLPIVHEIGGLKDTVIPFNPISKEGTGFGFVDFEGQILVETINRALEVYGK EPEVLNKMVLSAMSKDFSWGTKAQQYIELYQEL" gene 699901..702303 /gene="glgP" /locus_tag="L99884" /db_xref="GeneID:1114325" CDS 699901..702303 /gene="glgP" /locus_tag="L99884" /EC_number="2.4.1.1" /note="central intermediary metabolism" /codon_start=1 /transl_table=11 /product="glycogen phosphorylase" /protein_id="NP_266856.1" /db_xref="GI:15672682" /db_xref="GeneID:1114325" /translation="MKLSKKQFKQDFEERLTSKFATDLTKAGYQEIYDALASVVKHYY ANIWVADNQYKDETGKKQAYYFSIEFLPGKMLKSNLLNLGILNTVREGLNDFGIELDE VAKIEPDMAIGNGGLGRLASCFMDSLASTGLPGNGNGIRYRYGLFKQKIVDGYQVELP DSWLNNGNPWEVRRADKAVEVTFGGEVWLEDDGKGNLIPHYKDQERVLAVPYDTPMVG FENTTVNNMCLWRSEVPEELDPKFQNLDYMRQTSMLSAELYPDDSNYDGRLLRLKQEY FFVSAGLQRILHHYKGTQKKDIRKIGDYIAVHINDTHPALCVPEFMRLLVDEYGVGWN RAWDTTLKVMSYTNHTILSEALEKWPEEMIKQLLPRIYQIIVEIDRRRTAELLPKVGA TLVHNTRIIKDGQIHMANLSIIGSHSTNGVAKLHSDLLKDVELHDFYEIYPERFNNKT NGIADRRWIQIANERLSGIIDETIGKSWRHDLDELKLLKNFNNDEKTLEQLQKAKFDD KLRLAAVIKEQKGITVNPDAIFDVQVKRLHAYKRQLLNALHILKLYFDLKDNPELDRI PRVFIFGAKAAPSYHYAKSIIKVINEIANMINNDQTIKDKLKVVFMENYNVSLAEVII PAANVGEQISLASKEASGTSNMKFMLNGALTIGTLDGANIEIFEAAGDGNNFVFGLTK DEVYEYYRNGNYNARDIYEQNPVVNRILNALIDGTVPNIKSEGREIFDSLTVYNDEYF VLRDFNDYVRAQAELEKLYRDQKAWTQASLMNIANVGRFSSDRTVREYADDIWYIKAK KE" gene 702393..704195 /gene="apu" /locus_tag="L102412" /db_xref="GeneID:1114326" CDS 702393..704195 /gene="apu" /locus_tag="L102412" /EC_number="3.2.1.41" /note="degradation of polysaccharides" /codon_start=1 /transl_table=11 /product="amylopullulanase" /protein_id="NP_266857.1" /db_xref="GI:15672683" /db_xref="GeneID:1114326" /translation="MYYYNPWNLDYKQPFGAIKVGNSMSLRFATDQPSVLVTCVIRRD FGKRYEFSMTKDSGGDFRLTIPFDEEPGLYFYHFEIVESSDLGETRRFYGCSGIGGEG LLYTDENDVKPYQLTVFEKEDQAPSWYREAVFYQIFPDRFYNGNENGQINHPKPNSFI YGRKTDNPFYVKEENGDIARWDFFGGNLRGIIKKIPYLKELGINAIYLNPIFSGTSNH RYDTNDYLKIDSMLGRQEDFEELIQLLHQEKMHLILDGVFSHVGKNSLYFNINGDYGD DEGAAKNPDSPYFDWFKFENYPFEYKSWWGIKDLPEIDKDNDSFRNFIYGEKNSVLAK WNALGIDGWRLDVADELPDSFIKGIRENLDSYSDKILIGEIWEDASNKISYGKRRNYI LGGSLQAAMNYPFRDLIINLLNGHRSSQDVAHQLMTLQENYPKDIFYNNLNNLGTHDT ERILTMVGEKNLSVALAMLFVLPGIHCIYYGDEAGLSGGKDPENRKYFPWDNISPNVY NVYKSWTQKRLSENSLKYGEFSTFFTDRLLGILRYTDSEVFVELINPSEDELNIEVQE ITFLQNLKFLPELKKLLTEKVISGKTNLELKMKI" gene 704421..705914 /gene="dtpT" /locus_tag="L104437" /db_xref="GeneID:1114327" CDS 704421..705914 /gene="dtpT" /locus_tag="L104437" /experiment="experimental evidence, no additional details recorded" /note="evidence experimental PMID:8157671; transport and binding protein; amino acids, peptides and amines" /codon_start=1 /transl_table=11 /product="di-/tripeptide transporter" /protein_id="NP_266858.1" /db_xref="GI:15672684" /db_xref="GeneID:1114327" /translation="MQNLNKTEKTFFGQPRGLLTLFQTEFWERFSYYGMRAILVYYLY ALTTADNAGLGLPKAQAMAIVSIYGALVYLSTIVGGWVADRLLGASRTIFLGGILITL GHIALATPFGLSSLFVALFLIILGTGMLKPNISNMVGHLYSKDDSRRDTGFNIFVVGI NMGSLIAPLIVGTVGQGVNYHLGFSLAAIGMIFALFAYWYGRLRHFPEIGREPSNPMD SKARRNFLITLTIVVIVAIIGFFLLYQASPANFINNFINVLSIIGIVVPIIYFVMMFT SKKVESDERRKLTAYIPLFLSAIVFWAIEEQSSTIIAVWGESRSNLDPTWFGITFHID PSWYQLLNPLFIVLLSPIFVRLWNKLGERQPSTIVKFGLGLMLTGISYLIMTLPGLLN GTSGRASALWLVLMFAVQMAGELLVSPVGLSVSTKLAPVAFQSQMMAMWFLADSTSQA INAQITPLFKAATEVHFFAITGIIGIIVGIILLIVKKPILKLMGDVR" gene 706695..707642 /gene="tra983B" /locus_tag="L0444" /db_xref="GeneID:1114328" CDS 706695..707642 /gene="tra983B" /locus_tag="L0444" /note="transposon related function; belongs to the IS30 family of transposase" /codon_start=1 /transl_table=11 /product="transposase of IS983B" /protein_id="NP_266859.1" /db_xref="GI:15672685" /db_xref="GeneID:1114328" /translation="MQDYSITSQSKGKHLTNQDRLNIERWHNKEGLSNREIARLLNKA HGTIDREMKRGEIQLKRKVKYSAKKAQENYEGLRAHSVRPSKLTTEIDCYVSTRLKED KDSLEVIHQALKGVSLSSLYNWVNWGWLEAKRHHLFYPQYKAAKKIKPRAPKHPFGKS IEERPEFINNRLEVGHYEIDTVILTRAKNKVLLTLTERKYRTEIIRLIDGKTAQAVND ELVELQKSYDFKSITPDNGHEFARLSEVVSCPVYYAHAYASFERGTNENHNRMIRRHL PKGTTKTTPEEVAAIEYWMNHYPRKMFNYKSSYEMSLAG" gene 707710..709185 /gene="cydA" /locus_tag="L107726" /db_xref="GeneID:1114329" CDS 707710..709185 /gene="cydA" /locus_tag="L107726" /note="energy metabolism; electron transport" /codon_start=1 /transl_table=11 /product="cytochrome D ubiquinol oxidase subunit I" /protein_id="NP_266860.1" /db_xref="GI:15672686" /db_xref="GeneID:1114329" /translation="MFTIETLARFQFAMTTIFHFFFVPLSVGMVLMTAIMETIYVKTG DEKWKKRTKFFGSIMLLSFAVGVVTGIIQEFQFGMNWSDYSRYVGDIFGAPLAVEALL AFFLESTFLGVWMFGWDKLGKKLHNATLWIVFVGTFLSSLWILAANSWMQNPVGYEVK GGRATLTSFSALLTNPQTILEFSHVATGFLVTGGFVVAGISAYQILKNREIDMFKPVL RLGLLVALIGAVGNFVAGDQQMIEVKNSQPMKFAATEGVYETTPDPAAWDMVAFFNEA DHKEVFGIQIPYMLSILTYHRPSGSVEGMNEINAQLQKKYPDVAKEIGGNFFPPVTVL FWTFRIMAGLSMLMILLSALGLFWTRKKKPSLYENKFGLQVYRWMLFAPFLAITSGWL VTELGRYPWTVYGLFTIKDSVSPNVSVGSLLFSNIVYFFLFCFLGAVMVYFTLQRMKQ GVEGAETAYVSLDSFSQENFASSSKEDSEIQKETDEKGVDK" gene 709185..710180 /gene="cydB" /locus_tag="L109201" /db_xref="GeneID:1114330" CDS 709185..710180 /gene="cydB" /locus_tag="L109201" /note="energy metabolism; electron transport" /codon_start=1 /transl_table=11 /product="cytochrome D ubiquinol oxidase subunit II" /protein_id="NP_266861.1" /db_xref="GI:15672687" /db_xref="GeneID:1114330" /translation="MTGLQLFWFIIVGVLFSGFFFLEGFDYGVGMSAITIAKDKREVE QAIGSIGPVWDLNEVWLLTAGGAMFASFPYWYASLFSGFYLILFLILVGLIFRGVTFE FRHHSHTEKGKMLWTKVLGVASFAIPFLFGLMFTSMIQGVPMDAKGNVTATFTTYVNF LSVVGGVAVMLLAGLHGLNYLALKTEGALRERAAKVANILYFVLYAGEVVFAVLLAIF TDFFEKHFIGTLVLLALIVILTLVAHLSVRAGKEMSAFLASGLTFIALVALIFQGIFP RVMIATNPAHSILIKNASSTGYTLKTMTIITLVILPFVLIYMGWTYFIFRKRIKK" gene 710487..712376 /gene="cydC" /locus_tag="L110479" /db_xref="GeneID:1114331" CDS 710487..712376 /gene="cydC" /locus_tag="L110479" /note="transport and binding protein; multidrug resistance; involved in the cytochrome D branch of aerobic respiration; MDR subfamily" /codon_start=1 /transl_table=11 /product="cytochrome D ABC transporter ATP binding and permease protein" /protein_id="NP_266862.2" /db_xref="GI:30024006" /db_xref="GeneID:1114331" /translation="MIDKSLFELPGVRRMFPILGILAVFQFIAIAGQALFLATAITKL WQGPLFSHTIPWVLGFFACFLSREIINFGRSKALDKLAYQLATKLRGDMLDKFFRLGP VAIANLGSGSAATPVITGIDQVENYIKLVLSKVLNMMIIPMLILIPVYFLDWQSGIVL TLTFPFAIIFMILLGYAAQGRAERQYKTFQYLSNHFLDSLRGISTLKYFGLSKDYSNS IYKTSEDFRKETMGALRIAMLSTFALDFFASLSVAVVALFLGLRLMSGDILLFPALAA LILAPEYFLPLRDFASDYHATLNGKNALAAVNEVLSTEENTLSVLTEKVTWSANSQLQ LTELGKIYDTGRGISNVILSVNGFKKIAIVGNSGSGKSTLLSMLAGFLKPTAGEIKLN EQSLTSLTDENYRQSVQFIPQKTYIFAGTFRENLAFYEPDSTDDEIKAAAKLAGLESL IDEIGLDGQIGASGRTISGGQAQRVALARAFLSHTRNILFLDEPTAHLDIETELEIKA NILPLLENKLVFIATHRLHWLSSMDLVIVLNEGQVAGIGTPEQLLSENTYYQKLLSQM RGVDDDKNLLDNETSESVKDQEEKESERSNFSSVNDKSTDSSVSQARQIMGVRNNEIK KYFVR" gene 712348..714069 /gene="cydD" /locus_tag="L112352" /db_xref="GeneID:1114332" CDS 712348..714069 /gene="cydD" /locus_tag="L112352" /note="transport and binding protein; multidrug resistance; involved in the cytochrome D branch of aerobic respiration; MDR subfamily" /codon_start=1 /transl_table=11 /product="cytochrome D ABC transporter ATP binding and permease protein" /protein_id="NP_266863.1" /db_xref="GI:15672689" /db_xref="GeneID:1114332" /translation="MKLKNILFGNDWISPFLKKNRSGFILSIFLGTITISMAGLLMFS SGYVISKSATKPENILMIYVPVLFVRIFGIGRPVMHYVERLTSHNWILKITSLLRKKL YLRLEKTAVTLADRYRLGDLLGVLNEDIGNLQDLFLRTLFPVLIAGSLSIALIIAGGF FSLWFALGLALFLGFLIVILPLISLKFTVKLDEELKIYRNQLFSHLTDDILGLQDWVL SGRKEDFLTAYRGSELSARKIQAKLLAFGRRRNLFLQVVYGALVIYLMIWSSGALRLG DAPNYIAAVSLAAFPLFDAFSPLSDAVVETQRYGDSIIRLNDLPDQDEEVRTEEIVST DLVINNLQFSFEENKKIFDNFNLEVKQGEHIALLGRSGVGKSTLAGLIRGDLVPQSGS IQFSGVEPSKAKNVEEKIGVINQSPYLFATSLRSNLTLAKLNASDAEIWEALELVGLR KMVESLPQKLLTPVDEAGERFSGGERQRLALARVLLSDVDVVILDEPTVSLDPITENQ LLSLFFEQLRDKSIIFITHHLLGVHHMDRVLFLENGSIKFDGKPASLLENNPTFKELY QLDLGNE" gene 714363..715238 /gene="rmaB" /locus_tag="L114370" /db_xref="GeneID:1114333" CDS 714363..715238 /gene="rmaB" /locus_tag="L114370" /note="MarR-family regulators; belongs to the MarR family" /codon_start=1 /transl_table=11 /product="transcription regulator" /protein_id="NP_266864.1" /db_xref="GI:15672690" /db_xref="GeneID:1114333" /translation="MSEQTNNLLNLFSKLLHNPNILFALRADGISKQMKNRGNRNGAQ GLLVELWNKDGITNAEIAELLDIKPSSVTAQVKQLEEAEMVIRKQDENDKRVSRIFLT DKGREAQETRDTMHNDISETIFGNLTDEEQEQLAFLMEKLVENNDARNDQDFQRMAQF FGNPFMENMMNAHDRHAFGNHMRREMQNWQREMRRSSQEMKRGQNRMRRDERSQAPFG EDWKGFGKQLKDSFRNNFGGRDQADFNEHWDHFSDEMKNRFGDFDGNRRPDFDSKPKT DKNKEPKKPENWDDF" gene 715264..715752 /gene="yhbE" /locus_tag="L115265" /db_xref="GeneID:1114334" CDS 715264..715752 /gene="yhbE" /locus_tag="L115265" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266865.1" /db_xref="GI:15672691" /db_xref="GeneID:1114334" /translation="MRTLIAYAGKTGNTAKCARKLAIHLNQVTLVDLNAEVVNPKDFD AVIVASPVYSHKFERSVGSFLKKYQEILQTKPFAAFVTMVEYDSFTKVIKKEIAEPLR KKAVAIANFGGEVNNLTPFNWHDKIIAKSIIKLESKKHPIEFLPEAEKQFVAQLNKVE WI" gene 715779..716453 /gene="yhbF" /locus_tag="L115789" /db_xref="GeneID:1114335" CDS 715779..716453 /gene="yhbF" /locus_tag="L115789" /note="similar to several proteins from eukaryotes" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266866.1" /db_xref="GI:15672692" /db_xref="GeneID:1114335" /translation="MSKETKALTINPQLAAFQEELLKSYDKANLSAKKGQTLFVGSSL MEIFPIEKWEEAGEVTFSHYIYNRAVRATTTSFLLEHIESQIFNLEPSKIFINIGTND IGFEIPEEEFLNNYDQILSQIESKLPQTQVYVMRYYPINTVDFGQDSDEKTLFETRSN KKFQKASDKIKKLADNHHFHFIDVNDGLSDENGNLKKELTFDGAHLNPAGYQLVLENL KVYLEE" gene 716555..718309 /gene="lmrA" /locus_tag="L116532" /db_xref="GeneID:1114336" CDS 716555..718309 /gene="lmrA" /locus_tag="L116532" /experiment="experimental evidence, no additional details recorded" /note="evidence experimental PMID:8855237; transport and binding protein; multidrug resistance" /codon_start=1 /transl_table=11 /product="multidrug resistance ABC transporter ATP binding and permease protein" /protein_id="NP_266867.1" /db_xref="GI:15672693" /db_xref="GeneID:1114336" /translation="MANRIEGKAVDKTSIKHFIKLIRAAKPRYLFFIIGILAGIVGTL IQLQVPKMVQPLVNSFGHGVNGGKVALVIALYIGSAAVSAIAAIVLGIFGESVVKNLR TRVWDKMIHLPVKYFDEVKTGEMSSRLANDTTQVKNLIANSIPQAFTSILLLVGSIVF MLQMQWRLTLAMIIAVPVVMLIMFPIMTFGQKIGRTRQDSLANFQGIASESLSEIRLV KSSNAEKQASKKAENDVNALYKIGVKEAIFDGLMSPVMMLSMMLMIFGLLAYGIYLIS TGVMSLGTLLGMMMYLMNLIGAVPTVATFFTELAKASGSTGRLTELLDEEQEVLHQGE SLDLEGKTLSARHVDFAYDDSEQILRDISFEAQPNSIIAFAGPSGGGKSTIFSLLERF YQPTAGEITIDGQPIDNISLENWRSQIGFVSQDSAIMAGTIRENLTYGLEGDYTDEDL WQVLDLAFARSFVENMPDQLNTEVGERGVKISGGQRQRLAIARAFLRNPKILMLDEAT ASLDSESESMVQKALDSLMKGRTTLVIAHRLSTIVDADKIYFIEKGQITGSGKHNELV ATHPLYAKYVSEQLTVGQ" gene complement(718328..718939) /gene="yhbH" /locus_tag="L118350" /db_xref="GeneID:1114337" CDS complement(718328..718939) /gene="yhbH" /locus_tag="L118350" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266868.1" /db_xref="GI:15672694" /db_xref="GeneID:1114337" /translation="MVSKGRLAGFIDAIIAVIMTIMLLEFELPKTGGILDFLKDNLVY LIAYLLSFIYVTTSWFNQQYMLSQAEKITRRIYHSCMIWVLSLSMLPVLSAWAGRTMD FFQDFGIHSPKAPALLFIVMIYIWGFAYSYMTDCFIADNPKEKAELIAQMDVYHYLRN PFWKIGMVISFIITFFYPPFVFIYTAGEMIIATIRSQNKKSST" gene complement(719010..719654) /gene="apl" /locus_tag="L119032" /db_xref="GeneID:1114338" CDS complement(719010..719654) /gene="apl" /locus_tag="L119032" /note="phosphorus compounds; complements a phoA mutation in Escherichia coli" /codon_start=1 /transl_table=11 /product="alkaline phosphatase" /protein_id="NP_266869.1" /db_xref="GI:15672695" /db_xref="GeneID:1114338" /translation="MQEIIIQVMNQFGYFGVAFLIMIENIFPPIPSEVILTFGGFMTT YSELGIIGMIIAATIGSVLGALILYFVGRLLSVERLEKLVSGRLGKVLRLKPEDITKA EKWFLKRGYATIFFCRFIPLIRSLISIPAGSAKMKLPSFLILTTLGTLIWNIVLVCLG AALGDNWEMIAGILDSYSSVVVVILGIIFILAILIFVKKRFFPKNKNYSSDTEK" gene complement(719869..721863) /gene="yhcA" /locus_tag="L119891" /db_xref="GeneID:1114339" CDS complement(719869..721863) /gene="yhcA" /locus_tag="L119891" /note="transport and binding protein" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding and permease protein" /protein_id="NP_266870.1" /db_xref="GI:15672696" /db_xref="GeneID:1114339" /translation="MAVLELKNIRKSYFLGKEEFPVLKGINLEFERGDFVSLLGESGG GKSTLMNIIGGLDRKYEGDVIVDGLAQKIKKEKDMDAYRRDTIGFIFQSFNLVSYLSV LDNILISLKMTSLSDKERHERAIELTKQVGLYEHRKKNPSQLSGGQKQRVAIARALAS DPEIILADEPTGALDSQNTKEVLALLRQIAQSGKTVIVVTHSQEVADYGTRIIRLADG QITGDERLKEPYPVESHQRMNSKALSYRDTFRTAFKHFTHSWKINLLIAIGTAIGLFS VIFFLGLGNGATKYMNDTITSSVNPNVVTIFKRTTTDNKLGNEQALQQTQQELGNAAT NLDSTHLSKLKKVDNVKKVEPTYSISGLGTLTASDKSKSGLMTLDTWTQSNINDDYVA GSKPADGEIAIYASDAKELNKDYKSLVGKKITIKIPAKTAAGASVEVTKEFTVSGILK NPQGPASSSSSLIATYNTVKAALESANADSDATYAVVTVNKVDNVKSTTSDIQNLKID GTKAFVTYSVTSFLDVITNITNIVSYVLAAIAGISLIVSIFMIVVTTYMSVAERTKEI GVIRALGGRKKDISRLFTAESLILGLSSAAIAIGFAYLGQFLINKALSSFLDGASIVQ ISGGHIIFAIIVAVLIALLASLAPSGRAARLNTIEALASE" gene complement(721971..722189) /gene="yhcC" /locus_tag="L121994" /db_xref="GeneID:1114340" CDS complement(721971..722189) /gene="yhcC" /locus_tag="L121994" /note="similar to hypothetical protein MJ1230 of Methanococcus jannaschii" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266871.1" /db_xref="GI:15672697" /db_xref="GeneID:1114340" /translation="MNGYQQQYTCIKCGNHNFEEDQLQATGGNFSKIFDVQNKKFITI SCSQCGYTELYKAQTSTGMNILDFLLNG" gene 722399..723061 /gene="yhcB" /locus_tag="L122299" /db_xref="GeneID:1114341" CDS 722399..723061 /gene="yhcB" /locus_tag="L122299" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266872.1" /db_xref="GI:15672698" /db_xref="GeneID:1114341" /translation="MDRQVKEKLRIALIFALNAGFMDGFSFFHFNDRFIGAQSGNVIQ AGINIAKGDFARFWDFAIPIIFFILGVMTRGFYSHYLMKRRRFDASYLLLVQWLGVTI FALAYGLGLKIPVSFYVGIFSYFMAIQYDTFTKVHGRAYGSIFMTGNMKSMSANLAQY IITKDKQKLRSVGIYAALISIFFAGAAIATLAGNWFGSWTMMGSTFMIGAVYLIVRFD EI" gene complement(723093..724079) /gene="qor" /locus_tag="L123116" /db_xref="GeneID:1114342" CDS complement(723093..724079) /gene="qor" /locus_tag="L123116" /note="energy metabolism; electron transport" /codon_start=1 /transl_table=11 /product="quinone oxidoreductase" /protein_id="NP_266873.1" /db_xref="GI:15672699" /db_xref="GeneID:1114342" /translation="MKAIGTIDSSKNFIDFEIEKPILRPHDLLIKVEAISINPVDTKV RKGIKGNLAEPKILGWDGLGTVVELGSETKLFKVGDKVFWAGDVTRSGSNAEFQAVDE RIVGFAPKNLTKEKAVAMPLTSLTAYELLFEKLEVTDKSKGKSLLIINGAGGVGSVAI QMAKNAGLTVIATASNPQAIEWVKNFGADYTVNHHEKLVPQVHELGFKFVDYILILNA VVEHMPAVNELIAPQGSIANIVEPGQAINLDQLAHKSARFNFEWMFTKVVSNTSDLQS QHDILNKVSEWLDNDVLKSTMTQNLGPITAENVKKAHELIEENHTIGKIILS" gene 724247..725356 /gene="yhcE" /locus_tag="L124252" /db_xref="GeneID:1114343" CDS 724247..725356 /gene="yhcE" /locus_tag="L124252" /note="probably methionine synthase II, evidenced by COGnitor" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266874.1" /db_xref="GI:15672700" /db_xref="GeneID:1114343" /translation="MTKTYKHYHFDHVGSFLRPQTLKEARLAYSEGQLPLSDFKKIQE SEIKRLVKEEVNVGLKAVTDGEFNRSWWHLDFLWGLNGVGTYEQEDSYKFHGAKTRTT NIELTGKVAFNPEHPFFADFNYLKSLLPEGVEPKVTIPSPSLIPNRDGRSDRWPEFYG SWEEFLDDLAQAYHETLLHFYELGARYIQLDDTTWAYLIARLLDDPENHEKYVKMCED IVYLVNKLLKDLPEDLRVSTHICRGNFKSTYLFEGSYEPVAKYLGQLNYDTFFLEYDD ARSGSFAPLAEIWNQRKDVLLVLGLFTSKHPELEKYEDIKARLDEALESIPLENLALS TQCGFASTEEGNDLTEEEEWAKLAHIKKIVDKIWK" gene 725482..726234 /gene="yhcG" /locus_tag="L125485" /db_xref="GeneID:1114344" CDS 725482..726234 /gene="yhcG" /locus_tag="L125485" /note="probably metal-dependent hydrolase, evidenced by COGnitor" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266875.1" /db_xref="GI:15672701" /db_xref="GeneID:1114344" /translation="MKLTALGVWGGYPTRDAGTTSYLLQSESGFNMLLDCGSRAVTEL EHELQPTQLDAVILSHYHEDHIADLGALRQYRQLYPLGQDGWDGMMLPIYGHGENEYE FSKLTLDKVSEGHLYNVENGTKVGPFDITFLKTVHPVVNYAMRIVERRTGQVLIYTGD TGYFDELTDFAKEADLLLADVYFFKDKAKMPNHLSSIEAGQIAKDAKVKKLILTHLPQ FGDLDILLTEAKEAAGDAVITDLAVPHKKWQL" gene 726222..727160 /gene="yhcH" /locus_tag="L126240" /db_xref="GeneID:1114345" CDS 726222..727160 /gene="yhcH" /locus_tag="L126240" /note="probably protein phosphatase, evidenced by COGnitor" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266876.1" /db_xref="GI:15672702" /db_xref="GeneID:1114345" /translation="MATLISPFKKLIFLISFVILLTGIFFGFVSIQNCVLNYNPPKTK SQIEQLVKKSADSSKTRFVSDDKHYQRNLFVSDIHGRLSGLKKTLTEIHFSKNDRLFV LGDSIDHGRFGFDVLLYLLKTLPDAGYHVTVMIGNHEQMWSELASDGKTDEEQLSNAI GTIDIYEGAPPNGWQYSIENWKKLSVTDRQFLLTEMNNNFGQPEQLIEKIGNKWVVLS HSAKMSLSYEKEKTKDLFWEHLPGDSFERRNSVAKAVGVPNTDVQVFVGHVSGFLFGK HRNYICLDNTIVNGTLEQFEAVPVKIYCLEQEKFLG" gene 727161..727628 /gene="yhcI" /locus_tag="L127182" /db_xref="GeneID:1114346" CDS 727161..727628 /gene="yhcI" /locus_tag="L127182" /note="probably amino acid deaminase, evidenced by COGnitor" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266877.1" /db_xref="GI:15672703" /db_xref="GeneID:1114346" /translation="MNFTEEEKEFFMKEALKEAQKAAENEEVPIGVVIVKDGEIIARD FNRRELDGRATHHAEVCAIEAANQAVGNWRLLDCALFVTIEPCVMCAGAIGLARIPQV YFGATNPKFGGTVSLYQILEDKRLNHRVQVESGILEDECAKIMQDFFKNRRKK" gene complement(728130..728969) /gene="tra981D" /locus_tag="L0433" /db_xref="GeneID:1114347" CDS complement(728130..728969) /gene="tra981D" /locus_tag="L0433" /experiment="experimental evidence, no additional details recorded" /note="evidence experimental PMID:8389385; transposon related function. related to a family of IS elements that includes IS2, IS3, IS150, IS600, IS629, IS861, IS904 and ISL1" /codon_start=1 /transl_table=11 /product="transposase of IS981D" /protein_id="NP_266878.1" /db_xref="GI:15672704" /db_xref="GeneID:1114347" /translation="MAQTIQTLALNVRLSCQLLDVPESSYYERINRHPSKTQLRRQYL SLKISQLFNANRGIYGAPKIHHLLLKQGEKVGLKLVQKLMKQLQLKSVVIKKFKPGYS LSDHINRKNLIQTEPTKKNKVWSTDITYIPTQQGWAYLSTIMDRYTKKVIAWDLGKRM TVELVQRTLNKAIKSQDYPEAVILHSDQGSQYTSLEYEELLKYYGMTHSFSRRGYPYH NASLESWHGHLKREWVYQFKYKNFEEAYQSIFWYIEAFYNSKRIHQSLGYLTPNQFEK VSA" gene complement(728981..729241) /gene="yhcJ" /locus_tag="L129005" /db_xref="GeneID:1114348" CDS complement(728981..729241) /gene="yhcJ" /locus_tag="L129005" /note="transposon related function; orf1 of IS981" /codon_start=1 /transl_table=11 /product="transposase" /protein_id="NP_266879.1" /db_xref="GI:15672705" /db_xref="GeneID:1114348" /translation="MQKRYSKEFKETLIAFYHSGQSVTQLSKEYDVAPATIYKWIDLY SKSNESSVSKADFLELKRQLAKVKEERDILKKVLTIFAEKKK" gene 729346..729459 /locus_tag="L200027" /db_xref="GeneID:1114349" CDS 729346..729459 /locus_tag="L200027" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_835301.1" /db_xref="GI:30024007" /db_xref="GeneID:1114349" /translation="MQGYKDAELSLRWLQFGVFSPINRLHSSKSEFTSKEP" gene 729487..730284 /gene="yhcK" /locus_tag="L129481" /db_xref="GeneID:1114350" CDS 729487..730284 /gene="yhcK" /locus_tag="L129481" /note="similar to C-terminal parts of alpha-glucosidases from differenr species" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266880.1" /db_xref="GI:15672706" /db_xref="GeneID:1114350" /translation="MIEFLQLRHQLIPYLYSANFMTAFKGKALIEPIYYEYPLEEEAY NHRNQYNFGDQLMVAPITKKMNFNLQMGNVEVWFPEGIWYDFFTGQRYDGNVSLKVYR EITEIPVFAKAGAIIPLDKNPLIKEEIPSEIIWKIFPGADGEYTLLEDDNETKAKFVE GIFTITSKQETMRKHTIVYGGKEIVSGKIGNFSIDLKEEEGQFDWDFATSLFRRLDIA EIDYEEKDQILQKLSLIKEYDKQVAYIKTIENAELEDSLFELLYSGK" gene 730327..731367 /gene="rliC" /locus_tag="L0147" /db_xref="GeneID:1114351" CDS 730327..731367 /gene="rliC" /locus_tag="L0147" /note="LacI-family regulators" /codon_start=1 /transl_table=11 /product="LacI family transcriptional regulator" /protein_id="NP_266881.1" /db_xref="GI:15672707" /db_xref="GeneID:1114351" /translation="MTYKNVNISRFLLETNIMTKITLKEIAEMAGVSVMTVSNVIRGK NSRVSVETKAKIQALVKKYNYVPNQNASNLRSGKSRLIGVLFYNKSQTIDFTDPFISS VLTGIERMAKEKGYFTMVHTVQSAKGIEQLQRNWAFAGFIVVGASNRDFFKIDDAILT PVSYIDTYFEKAKKLDGKLRNFIGTDEEKISESIANYLSKMGHKKVLFFSFDFNQEEP SVIEKRYCAFRKFFKGEILFLTTKSADYQEILKSVSEYLMEQPFTAIYSTADILAAKL NQIFKDISIVGVDNAEFDEFISPKLTTVAIDQVEKGKMAMSNLIDSIENEISEDYISD SLLLVRDSVKKL" gene complement(731368..731784) /gene="yhdA" /locus_tag="L131392" /db_xref="GeneID:1114352" CDS complement(731368..731784) /gene="yhdA" /locus_tag="L131392" /note="similar to ComAB (YuxO) protein of Bacillus subtilis" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266882.1" /db_xref="GI:15672708" /db_xref="GeneID:1114352" /translation="MNMIDQLNITDFQVFTDENSDKSVSKIYKFSSKMILSDFHAQPH GFLNGGASLALAEITAGMASNAIGSSQYFALGQSISANHLNSKKCEGFVNACGLLLKN GKRNHVWEIKITDENETLISQITVVNALVPQKNSDK" gene complement(731781..732884) /gene="yhdB" /locus_tag="L131805" /db_xref="GeneID:1114353" CDS complement(731781..732884) /gene="yhdB" /locus_tag="L131805" /note="menaquinone and ubiquinone; probably involved in menaquinone biosynthesis" /codon_start=1 /transl_table=11 /product="racemase" /protein_id="NP_266883.1" /db_xref="GI:15672709" /db_xref="GeneID:1114353" /translation="MIIEKITMFHVQLPMKFNFKTAKGSLNLRDTIIIKVESPDGLSG FGEVVAFTTPFYTSETFADSWKILEETYLPEILQKEFSHPFEIHEFFRNPLPMALAGL ENALLDLYFKERNKNLIAGLFQEKLADKIPRGAVLGQMSDEQTIKEIDQLINSGVKRI KLKISPQIGTDLIKKLVKRYPQITFALDANQSFQLTDWPVIKELDELGLACIEEPFDI KDLSELKLLTENFLTPICFDESVQDLESLKILTELPFQTMLNVKIGRLGGLYQTQKAI EFCRQHQIGFWIGSMVESGISKILHVQLAALSGNAMAGDLSDSKHYFDLDLVQPEIAF PNGWMTVPTGIGIGLSVNEVALDHYTVNKEIFQ" gene complement(732881..734236) /gene="menE" /locus_tag="L0172" /db_xref="GeneID:1114354" CDS complement(732881..734236) /gene="menE" /locus_tag="L0172" /EC_number="6.2.1.26" /function="menaquinone biosynthesis" /note="menaquinone and ubiquinone" /codon_start=1 /transl_table=11 /product="O-succinylbenzoic acid-CoA ligase" /protein_id="NP_266884.2" /db_xref="GI:30024008" /db_xref="GeneID:1114354" /translation="MKWLKKQAELYPQKQFLNDSTFAQINQEVNKMAEHLAPLIDNQS RVALLSENSVEMAVVLFALLGLSKEVLLLNRHLTEYELADQIKELKIDKVFTSDLLTE KVTDSISFSEIWTSNPCPVSLSADFPDEKIAVIMNTSATTGKFKSVPITWGMISNHVK ASKETLGAYDNDNWLVILPMFHVSGLSIIMRTLYNATSATVVDKFDENQLLEMINSGK INMVSLVPTLLTRIADKLHSNNLRLILLGGEFIPQPLIKKCQELGLPIYKTYGMTESF SQSVTFNILDFPDKTSSVGRPLPGVEIEIRQADLAGVGEIWLKSPMLMKAYLGQKPYG TAFETGDIGYLDTDGFLYLLNRRKDIIISGGENIYPKEIEDLVYSLPEIKECALVAKP DAKWGQVPILFVSGNISQEKLENFLTEKLAKYKRPQSITFMDELPKNASGKILRKELK G" gene complement(734363..735205) /gene="menB" /locus_tag="L0171" /db_xref="GeneID:1114355" CDS complement(734363..735205) /gene="menB" /locus_tag="L0171" /EC_number="4.1.3.36" /function="menaquinone biosynthesis" /note="catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA" /codon_start=1 /transl_table=11 /product="naphthoate synthase" /protein_id="NP_266885.1" /db_xref="GI:15672711" /db_xref="GeneID:1114355" /translation="MSKFNWVALNRNYEDIIYETYDGIAKITINRPEVRNAFRPKTVV EMIDAFSVARDDTNVGVIILTGANHGKGEDKEAFCSGGDQKVRGNGGYVGEDQIPRLN VLDLQHLIRITPKPVIAMVNGFAIGGGHVLHIVCDLTIASENAKFGQTGPRVGSFDAG YGAGLLAAMVGQKKAREIWFLCRQYTAQEAMDMGMVNTVVPFDRLEEETVQWAQEMLA LSPMALRMLKGSMNAATDGLAGLQQFAGDATLMFYTTDEAKEGRDAFKEKRKPDFDQF PKFP" gene complement(735592..736407) /gene="menX" /locus_tag="L0170" /db_xref="GeneID:1114356" CDS complement(735592..736407) /gene="menX" /locus_tag="L0170" /function="menaquinone biosynthesis" /note="menaquinone and ubiquinone; putative counterpart of Bacillus subtilis YtxM" /codon_start=1 /transl_table=11 /product="YtxM-like protein" /protein_id="NP_266886.1" /db_xref="GI:15672712" /db_xref="GeneID:1114356" /translation="MKIDKKIITIDGFDYAVRIWGTGEVLFALHGFSESSNTWRNLHL AGYKIVAIDLLGHGSSAKPKELAPYKLDAILKNLHLLFAQFTDGNSFSLLGYSMGGRL ALRYCLAYPSAPVKYLILESTGPGLLSSEDRKKRRLADEELGQKILLNGAAWFADFWA NISLFESQKKLSVKIQQEIWESRASNSPLALTQTLNGTGQGQLSYIGDKISLIKSNIL YLSGDLDEKYSKIAIEIFAPNPNVTWISVAASGHNIHLENPVTYQKILEEFLP" gene complement(736397..738079) /gene="menD" /locus_tag="L0169" /db_xref="GeneID:1114357" CDS complement(736397..738079) /gene="menD" /locus_tag="L0169" /EC_number="4.1.1.71" /function="first step of menaquinone biosynthesis" /note="menaquinone and ubiquinone" /codon_start=1 /transl_table=11 /product="2-oxoglutarate decarboxylase" /protein_id="NP_266887.1" /db_xref="GI:15672713" /db_xref="GeneID:1114357" /translation="MTNEYLAPFVDELFNLGVREAVFSPGSRSTALAMLFEEYKKYDT YVNIDERSAAFFALGIAKAKKRPVVLVCTSGSAAAHHFPAVLEAKMSRVPLIILTADR PAELQFVGAPQTVDQTRFFGNFVNHFENLEAPHIQKQSQTENFWTYPRKVAQRAVLSA ISPLSGPVQINVPLRDLLVPELKSENYEKGRSKHAFKFYEGQAQVILPFDEALLSGKT LILAGANFDKDYSEALLKLAEQLKAPILADPLSNLRNHNHPLVIDSYDAFLANNDLKT QLKADAILLFGQMPVSKRLQQFVAFNNEAEFIQVDPALDYRNPSLTTTTMVQSDVLPF ASSIKKVNSDSSYLEKWQNAQEKMRQLLEKVTYEESPFEGRYVQELQKHLEALDAQLL VSNSMEIRDIDYWWKKADAKVRILGNRGVNGIDGTESTALGIATTGKPTVLLTGDLSM LHDLNGLIVGKTHELNLTIVLFNNDGGGIFHHLAQKGVPNFDYLFSTPHGLNFAGLAE LTGLDYHLVSGYADFGQQFEASLHQSGIHLLEIKTDKDLSLALHQKYTTYEN" gene complement(738133..739347) /gene="menF" /locus_tag="L0168" /db_xref="GeneID:1114358" CDS complement(738133..739347) /gene="menF" /locus_tag="L0168" /EC_number="5.4.4.2" /function="menaquinone biosynthesis" /note="menaquinone and ubiquinone" /codon_start=1 /transl_table=11 /product="menaquinone-specific isochorismate synthase" /protein_id="NP_266888.1" /db_xref="GI:15672714" /db_xref="GeneID:1114358" /translation="MKICNFRAHYSPTMLSYVIIFMVEKMNYIKINLKLNNPLAFWAN FSESERFFWFDPQKETFVIGCERLKAIDLEHDKFSDYTYLFHSQTFFDDIKGELWENF GGETIAFKHYFVVNKENSYTLTCDSPREIPEITIPKFKHQLTEKASDFSAWQELFYAI QKNFADGKSRKIVASRELEFTSQTSFELESIIQNLLDNNPNAFIFAYQKGKRIFLGAS PEILVQKENDQLLSYALAGTFPKTMENAGQKLLTDPKNLLEHDIVVQKIKRNLLEKAE TVTVGTTELMELKNVYHLRTILSAKNSELSLIDWTKQLHPTPALGGEPRHEALEFLRK HENHERGLYAAPLGLIDSKGNGTMIVGIRSALIVDKKLYAYAGCGIIPSSDALEEFRE TKVKLKTILEAL" gene 739685..740266 /gene="yhdC" /locus_tag="L1014" /db_xref="GeneID:1114359" CDS 739685..740266 /gene="yhdC" /locus_tag="L1014" /note="ribosomal proteins: synthesis and modification" /codon_start=1 /transl_table=11 /product="acetyl transferase" /protein_id="NP_266889.1" /db_xref="GI:15672715" /db_xref="GeneID:1114359" /translation="MNIYVKLAEFSIIETKRLLLRPFDLKDAEDMFDYSGNPENLKFV FAPHLSLSETRFSIANDYMKSPLGKWAIELKSEHRLIGDIHFVKISDKNQSAEIGYVL NQNYWNQGLLTEALKVLTEFSFEQFGLKKLILLIDKENVPSKKVALKSGYHLVKKFKG TNQYSKKIRDFEQYELGKSDDEIYQKNSEIGEI" gene 740273..741553 /gene="yheA" /locus_tag="L140288" /db_xref="GeneID:1114360" CDS 740273..741553 /gene="yheA" /locus_tag="L140288" /note="similar to YtoI of Bacillus subtilis" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266890.1" /db_xref="GI:15672716" /db_xref="GeneID:1114360" /translation="MSKHEEILNYIEGLEIGKQVSVRGIANRMKVADGTAYRAIKEAE ILGLVAVNDRSGTVRVAVKGQKVANRLTFGKLAEIANADVLGGLAGLEVEFSKFVISA MQRESFKRYLSPNGLVIVGDRKEIQNLALREQNAVLVTGGFDVDQEVVNYANQLGIPL LRTSYDTFTVANRISHALANELIKKDIITVGDVFHQKRATLREEDTVKDFLDLVKKTN DSRFAVVNTYNVVVGVVAMRDVTNKKNDTPLNKVMTRANVARASMTVASVSQKMIYEG YDMMPVVYENYTYAGIITKSDLLQSLQKAQEESQVAHTFSDNIANSLVEKGSAYTVTV EPFMINSVGTIANGVFAELITQVVQRVFAKKRRRNIIIEALNMHMMGAAAIDNVLEIY PKVIGETRIGAMVDCEIYHVNNIVAKVLVNVQLT" gene 741571..742494 /gene="yheB" /locus_tag="L141547" /db_xref="GeneID:1114361" CDS 741571..742494 /gene="yheB" /locus_tag="L141547" /note="similar to YtqI of Bacillus subtilis" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266891.1" /db_xref="GI:15672717" /db_xref="GeneID:1114361" /translation="MNEILEKIKAYELILIHRHKNPDPDAIGSQAGLRAILRENFPEK RIYAVGYDEPTLTYLAKMDLVELREDEKYLSIVCDTANTPRIDDERYKNADFLIKIDH HPNDDAYGDLLLVEPERSSASEIVADFAFETGLKLNAEAARLLYAGIIGDTGRFLYPA TSPNTLKVASKLAEFPFDRPALGREMSSFDMKVARLQGFVYENMEVSEKGAARVLLTQ EILKKFDLRDAETSSIVSTPGNIRGIESWAIFVEQADGHFRVRMRSKVKPINEIAKRH DGGGHALASGANSYSLEENQQIWQELQDNLK" gene complement(742698..743669) /gene="ansB" /locus_tag="L142722" /db_xref="GeneID:1114362" CDS complement(742698..743669) /gene="ansB" /locus_tag="L142722" /note="energy metabolism, amino acids and amines" /codon_start=1 /transl_table=11 /product="L-asparaginase" /protein_id="NP_266892.1" /db_xref="GI:15672718" /db_xref="GeneID:1114362" /translation="MMKKILILHTGGTISMAEDENGHVSPNAVNPMNAVSMQFDEVNL VTEDIFNLPSPHVTLSDMLVLKNRIKTAFIAEDFDGVVITHGTDTLEETAFFLDTTLS RGKPIVLTGAMRSSNELGTDGIYNLLTAIRVAADSNSSDRGVLVVMNDEIHSARYVTK THTTNVSTFQTPTHGPVGLLTKNKIIYFHKDSENQHLDVATVHGKVPIVKAFAGMTGE ILDLLNLEQLDGLVIEALGAGNLPPIASQSLQRLLDAKVPVVLVSRCFNGIAEPVYSY QGGGSQLYEAGVMFADEVNSQKARIKLIIALNAGLKDLSELRPFLEN" gene 743861..745249 /gene="yheD" /locus_tag="L143879" /db_xref="GeneID:1114363" CDS 743861..745249 /gene="yheD" /locus_tag="L143879" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266893.1" /db_xref="GI:15672719" /db_xref="GeneID:1114363" /translation="MDIKAVFFDLDGTLFTSTRGVATSTRKAIQELRQKDIFVGIATG RGPAFVMPLLEDLDLDFAVSYNGQYIFTPKEVIFQNPLEQKSLKNLINYATENHSDIS LGTAHGVNGSGLLKFGETRLASFLSGVLPSGTSGVARNSFKHIIRRVLPQNSNLADNE EEVIYQAMMVATRNETARLQEAFPELLVTRSNPYSVDLISKSGGKLPGIQRLGEHYGF TLDQVMCFGDSENDLTMISGVGYGIAMGNAVPEVKNIATYITDTNNQDGIAKALAYYG LIHYSVEKDFVSKDQNFNKVKDFHRLMDGKTQEIPKAFSPTEASFRADFKVEEIVEFL YASADGNQEKFTELVNNLHQAVDKAANKVTLKEHNEDSLTGQVDAMIDLLYFTYGSLV LSGIDPYEIFNAVHRANMGKIFPDGRPHFDPITHKVLKPEDWEEKFAPEGKIKKELER QKRVAAKKYENK" gene 745339..745683 /gene="yheE" /locus_tag="L145357" /db_xref="GeneID:1114364" CDS 745339..745683 /gene="yheE" /locus_tag="L145357" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266894.1" /db_xref="GI:15672720" /db_xref="GeneID:1114364" /translation="MLFIIITLIIIVLIIFLTILLLPGMAFFNKMSDQKYNADEKDLL TGILTTAISSKEATGEVMTTFVNESRKTMPAKIYLPNKDNIEQIESGAQVLIIESKAG IAYVIPYQQTIY" gene 745742..747253 /gene="floL" /locus_tag="L145739" /db_xref="GeneID:1114365" CDS 745742..747253 /gene="floL" /locus_tag="L145739" /note="surface polysaccharides, lipopolysaccharides and antigens; similar to flotillin" /codon_start=1 /transl_table=11 /product="flotillin-like protein" /protein_id="NP_266895.1" /db_xref="GI:15672721" /db_xref="GeneID:1114365" /translation="MPLLYILAIVVIVIILILLGIIAANYKKSGPQAALIVYGSGLGS KGVNKDSQGNRLKVVRGSGTFVLPIFQNARYLSLQSAAIDIKTEKVLSKDKIPVTVEA TAMIKVGSTLQDIATAAEQFLGKRDEQRDAMADQVLRGHLRAIVGTMTVSELIEDRNK FSAEVQGQAGTDLSKMGLSIVSFVINDIRDDQNYIKALGAKEVARVQQEAAIAVANAD KETRIQKAAADQDAQKAEALAATQVANAQKEKAISLAHYEQEQSIAAAEAKAQADQAQ ASADQAYAIQEAISKKETTEAEMQVELIKKQRETDLETQEVLRKAQENEANVVKAAEA AKAAQIAKAEADAREREVRAQAEAAAIEATAKATAKQREVTAMAEATAIEATGKAEAE AIRLKGLAEAEAIDKKAEAMQKMNDAAKLNMALEILPEVVASVSSNLQAVDSINIYGG EGSSKILGMSQESLKQGLDVLGTMGIDVPDLLNNFSSRGNSNETLEKVEKIEE" gene complement(747291..748643) /gene="thrA" /locus_tag="L0097" /db_xref="GeneID:1114366" CDS complement(747291..748643) /gene="thrA" /locus_tag="L0097" /EC_number="2.7.2.4" /note="catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; lysine and threonine sensitive" /codon_start=1 /transl_table=11 /product="aspartate kinase" /protein_id="NP_266896.1" /db_xref="GI:15672722" /db_xref="GeneID:1114366" /translation="MKVAKFGGSSLASASQIKKVFDIVQADKQRKFIVVSAPGKRSGA DTKVTDALIAYYKAYKSADEKGIHYYQNWIIERFREIYDELGLKSPVINQIAENINHL AQLDLDNVFTYDTFLAAGENNNAKLVADFFNHSGLPSRYVHPSDAGIMVSSDPGNARL LGGAYEHIKYLNELEETLIIPGFFGITKEGEVCTFSRGGSDITGSIIAAGVRAELYEN FTDVNGIFAAHPGIVKNPAYISELTYREMRELAYSGFSVLHDEALVPAYRAHVPLVIK NTNNPDHPGTKIVVQRETKGSPVVGIASSSAFSSLYVSKYLMNREVGFGRKVLSVLEN LGVRFEHMPTGIDDMSIIIRSRYLTQPISKALISNLTESLHPDEVYIDRDFSIITIVG EDMKEHVGVTARATAALSKQGISIAMLSQGSSEVSVMFIVKEKYEKEALKAIYSAFFD" gene complement(748873..749739) /gene="yheG" /locus_tag="L148897" /db_xref="GeneID:1114367" CDS complement(748873..749739) /gene="yheG" /locus_tag="L148897" /note="probably phosphoesterase, evidenced by COGnitor" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266897.1" /db_xref="GI:15672723" /db_xref="GeneID:1114367" /translation="MTNNLKRAVVLGGGGHFGIAWELGYLRGLEEAGLPIREADIFVG TSAGSQASVIVSSDKDWDLIWKEQIEKEISEITPISDEKMGELFKTFENIAKNSHSAK EWIAAEAEISKKTQPFISKEERLAMLKERYGSGQARWNSKLRIVATSIEDIERQVFDE NSNVDILVALQASGALQGVWPSVEINGKHFFDGGSFSMENPDVVVDADKMLVLSTGLP VDVPYKLEDLLAQLEKKGTETSLVLPSEKTMNILKDFNYNMVEAKIRPFVAQAGREQG QAEAALIKERWL" gene complement(749729..750205) /gene="rmaA" /locus_tag="L0248" /db_xref="GeneID:1114368" CDS complement(749729..750205) /gene="rmaA" /locus_tag="L0248" /note="MarR-family regulators" /codon_start=1 /transl_table=11 /product="MarR family transcriptional regulator" /protein_id="NP_266898.1" /db_xref="GI:15672724" /db_xref="GeneID:1114368" /translation="MEDNQYEYQGIQFIGKLSSEIYRRGYIYFTKRLVPFDINYIQLL CLISLYIKDNQSQEQITDDLSIDKSSVHRAIKGLIEKEYVSRVRDEKDKRVYRVSLTQ KARDIQTQIEEMTKERENLLSEGIDPQEKAIAFKVLNQMTQNANQIYEEEKKKNDK" gene 750333..751001 /gene="yhfA" /locus_tag="L150333" /db_xref="GeneID:1114369" CDS 750333..751001 /gene="yhfA" /locus_tag="L150333" /note="Similar to phosphoglucomutases and phosphoglycolate phosphatases from different species" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266899.1" /db_xref="GI:15672725" /db_xref="GeneID:1114369" /translation="MKFKAVIFDMDGVLVDTERYYLQRREEFFGGHGISISHLTPSDF IGGNMKDIWPRILQGSFDEEKASELQEDYEQFKENHPMPYAELLFSDVPDILEFLRQK EVKIALASSSSMFDIKQMLDIHQLNSYFEVVVSGNDFKQTKPNPEIYQSTMKKLGVTP SETLIIEDSEKGIQAGEAAGATVWAIEDKRFGMNQEKADLKVDSLTAIQKLLTESSLK MIKA" gene 751095..753059 /gene="yhfB" /locus_tag="L151062" /db_xref="GeneID:1114370" CDS 751095..753059 /gene="yhfB" /locus_tag="L151062" /note="similar to YybT of Bacillus subtilis" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266900.1" /db_xref="GI:15672726" /db_xref="GeneID:1114370" /translation="MNFVRRFSPLAIIIIMVIVQIIETVVVHVSATRWSIWIYLLILN IAITLILLSQTQNYQLRRQDFIRKINDEAENSLNATLDNMPIGVIRFNSETFEPEWFN PFIDMIFKGNDKVINRDDIKKILKNASDDQYITLGKQKYVAELDSDKNLIYLIDATKE VAFKSEFNDSRAVIGAISVDNYDDATDLITDSGRTAINSFIASFLEEFADKYGVYLRR INSSRHYFFCDYRILEKMINDKFSVLKEFRELSSQKEIPLTLSVGVAYGWNDFPVIGK VALNNLELAQVRGGDQVVLRENTPQARPVYFGGNSESRTQKSRTRARAISTALRTIIA EAEDVFIVGHRFTDMDALGAAVAMKAFANMSGKEAFVVYDPEQLLPDVERAINKMNES SDGFTHIVQLETAQKLKKKDSLLIMVDHSKTSQTLNLEFYKSFEKLVVIDHHRRDDDF PEHALLSYIESSASSASELTVEILQFHDNNQRKMSTIEASIVLAGIELDTKNFTKTTT ERTFEAAAYLRSRGTDNDLIKMIMATDFDKYKKANEIVLNAKMVLPGIALGVGLKHQK YDNIATAKAADTLLDMAGITAAFAITQHTNGYISISARSRNGFNVQTIMEQMGGGGHF NNAATQIYEKYIDEVQEDLIEILKERENEK" gene 753056..753508 /gene="rplI" /locus_tag="L0406" /db_xref="GeneID:1114371" CDS 753056..753508 /gene="rplI" /locus_tag="L0406" /note="ribosomal proteins; synthesis and modification; binds 23S rRNA; L9P family of ribosomal proteins" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L9" /protein_id="NP_266901.1" /db_xref="GI:15672727" /db_xref="GeneID:1114371" /translation="MKVVFLEDVKGQGKKGQIKEVPTGYAQNFLIKKNLAKVATAAAL SEVKGQAKAKEKEEAELLAEAKALKEVLEKEDTVVEIKMKVGQTGHTFGAVDKADIAK ALKSQFNLKLDKRKIQLINKIQALGTKDVPVKLHRDVTAVVKVKISEA" gene 753514..754881 /gene="dnaC" /locus_tag="L0286" /db_xref="GeneID:1114372" CDS 753514..754881 /gene="dnaC" /locus_tag="L0286" /note="DNA replication, restriction, modification, recombination, and repair; corresponds to the dnaC gene from Bacillus subtilis" /codon_start=1 /transl_table=11 /product="replicative DNA helicase" /protein_id="NP_266902.1" /db_xref="GI:15672728" /db_xref="GeneID:1114372" /translation="MPEIDLIKAPPQDLAAEQAVLGAVFLDSERLVEIKEFLSSDDFY KNAHKIIFRTMEKLSDAREAIDVLTIRSHLENQGELEAIGGIAYIAELATATPTAANA AYYAKIVAEKSLLRQLINRLTESVEKAYEQDSPADDILAQAEKSLIDVQQGRNTNGFK KISDVLAIHMDDLEQKAQQKSNITGIATGYPALDNMTTGLHEEELIILAARPAVGKTA FALNIAQNIGTKQDRTVAIFSLEMGAESLVSRMIAAEGSIDSHSLRTGQLNDQEWNDY FMATGTLSRASIYIDDTPGIKISEIRARSRKLAQETGNLGLIVIDYLQLISGTGRENR QQEVSEISRQLKILAKELKVPVIALSQLSRGVEQRQDKRPVLSDIRESGSIEQDADIV AFLYRDDYYERGTGEDEDGEEILEDNKVEVIIEKNRSGSRGTVELLFIKEHNKFASID NRYGD" gene 755076..755333 /gene="yhfC" /locus_tag="L155040" /db_xref="GeneID:1114373" CDS 755076..755333 /gene="yhfC" /locus_tag="L155040" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266903.1" /db_xref="GI:15672729" /db_xref="GeneID:1114373" /translation="MDNQNQEIGKIVDIREKVQAHLGETIEITSQFGRKRENRHKVNL IEAYATHFIIENIPARGPKTTESYQYADILTQTILIHYPNA" gene 755402..756175 /gene="yhfD" /locus_tag="L155396" /db_xref="GeneID:1114374" CDS 755402..756175 /gene="yhfD" /locus_tag="L155396" /note="similar to YtmP of Bacillus subtilis" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266904.1" /db_xref="GI:15672730" /db_xref="GeneID:1114374" /translation="MMKADWDMTPVKGGSGNAFFGKSDQERVFIKKNGSPFLPSIYLE GITPKVLWTKRTAEGDTLSAQPWIDGHTLSPEDMEDRQINHILAHLHDSKKLVESYKK LGSQIILPEQLLEDCVQNTEALRTNHFLSGIIEEMRQQVPEIKNEEVVVVHGDVNHKN WLVDDNSGKIYLVDWDTVFLSDSMVDMAHVLSHYIKPNNWSLWLMTSGVRPRSDIMDK VAWYGKLSFLRQISEYLSRGKMKEVNQEILGLRKFCELF" gene 756296..756949 /gene="trmB" /locus_tag="L156302" /gene_synonym="yggH" /db_xref="GeneID:1114375" CDS 756296..756949 /gene="trmB" /locus_tag="L156302" /gene_synonym="yggH" /EC_number="2.1.1.33" /note="tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine" /codon_start=1 /transl_table=11 /product="tRNA (guanine-N(7)-)-methyltransferase" /protein_id="NP_266905.1" /db_xref="GI:15672731" /db_xref="GeneID:1114375" /translation="MRVRNRKGAGEMLAENAHIVVENPADFKGRWSERFGNDHPIHIE VGCGKGAFITGMAALHPEINYIAIDMQLSVLSYALDKAIEADLPNVQMMLVDGAALSE YFADGEIDQVYLNFSDPWPKGRHEKRRLTYKSFLATYEKILRPEGEIHFKTDNRGLFE YSLVSLANYGMELKKVWLDLHQDEEFAPQNVMTEYEQKFSQKGQVIYRLEAKFLPKK" gene 757068..757514 /gene="nrdR" /locus_tag="L157023" /db_xref="GeneID:1114376" CDS 757068..757514 /gene="nrdR" /locus_tag="L157023" /codon_start=1 /transl_table=11 /product="transcriptional regulator NrdR" /protein_id="NP_266906.1" /db_xref="GI:15672732" /db_xref="GeneID:1114376" /translation="MRCPKCSSEESKVVDSRQAEDAIRRRRVCESCGFRFTTFERIEE MPLLVIKKDDKREPFNREKIVRGLVRSAYKRPVSSEDIETTVANVERKIRQLDSNEVE SDVIGEFVMQELAELDDITYIRFASVYRSFKDVSELEELLKNITKK" gene complement(757501..757836) /locus_tag="L200028" /db_xref="GeneID:1114377" CDS complement(757501..757836) /locus_tag="L200028" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_835302.1" /db_xref="GI:30024009" /db_xref="GeneID:1114377" /translation="MLLIQSLFTDRKFSELFFLLFADKMLLIQSLFTDRKFSKLIFLL FADKMFLIQSLFTDRKFSELIFLLFADKMLSIQPHFTDRKFSKLIFLLFADKMLLIQS LFTDGFIFW" gene 757902..759077 /gene="dnaB" /locus_tag="L157908" /db_xref="GeneID:1114378" CDS 757902..759077 /gene="dnaB" /locus_tag="L157908" /note="DNA replication, restriction, modification, recombination, and repair; replication protein; putative counterpart to the Bacillus subtilis DnaB protein, based on sequence similarity and chromosomal position" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266907.1" /db_xref="GI:15672733" /db_xref="GeneID:1114378" /translation="MRAGDSFTMLNRGKTSFDAEAFRLLYLPIIGTDAFALYQLMLSF STGRISHFLEYLNLGLNPFIEALDKLSGLSLVRVYDDHTSLYFEVKSPLNFENFLADD FYRQLLISRIGENRVAALAKRMEPKGKEVSKKFHEVYKVSFDSQAQQNPSNTNERFDM GAFKSIMERQGYHLNNENQDSLTLYSLAEKFELNWYELFKQAEKTANADKTLNMNNLM RSLSGASQPQPALSAFPKAFADLIVISKSHEPDDFIRQIKAQAGGFVSSEEHKLLTNL SRQNLPAEVQNILIHYVLVQQKNASLNPNFVNALANDWMRNEVFTAETAVKRILEREE LAAAKAKTGAEKRPMKIKKEAPKWSNPDYENKTSQEELAKLEKIRLDSLKKLKGEQN" gene 759077..759958 /gene="dnaI" /locus_tag="L0281" /db_xref="GeneID:1114379" CDS 759077..759958 /gene="dnaI" /locus_tag="L0281" /note="Primosomal protein that may act to load helicase DnaC during DNA replication" /codon_start=1 /transl_table=11 /product="primosomal protein DnaI" /protein_id="NP_266908.1" /db_xref="GI:15672734" /db_xref="GeneID:1114379" /translation="MESIGDILGKRQDIRENFEKLVAEVLKNADVQAFIAQHQMTSDE IQRSYSKFYEYVREHEKFEKGEKRAADGYEPVLIMNHGYADVSYQTTNELAQQQAAQN LLRRMNIIGLPKDLKQVTLADIALDDVQRIKPYQALVDFITNFPKKKGLYLYGDFGVG KSFMLAAMANELAKKGISTTLLHYPTFISDLDFDNAKVWVNEIKASQVLVLDDIGAEQ NNAWVRDSILQVILQHRMQENLPTFFTSNLRMEELEQHLAETKRADEIWPAKRVMERV KYLAEEMRLEGTNRRHD" gene 759951..760679 /gene="yhgA" /locus_tag="L159954" /db_xref="GeneID:1114380" CDS 759951..760679 /gene="yhgA" /locus_tag="L159954" /note="aerobic energy metabolism" /codon_start=1 /transl_table=11 /product="oxidoreductase" /protein_id="NP_266909.1" /db_xref="GI:15672735" /db_xref="GeneID:1114380" /translation="MTETNETIDLMMNHTSVRNFTEEAIEPKDLEKILKAAQMASTWK NFQSYSVIVVESQAQKDAIYEFQPQKSIKNCAAYLVFVGDLNRAQKAVELDQGNFQPQ GIESLLITSVDAATAGQNALLAAESLGYNGVMVGLIRDQSSEISKVLNLPDYTYPIFG IALGKAARLNKVKPRLPLEATAFKEKYVEQTSETIEKYDQVQEEYAGNRRLNKWSERI VDQWGQPEISASTENLKAKKLLFN" gene 760781..761296 /gene="yhgB" /locus_tag="L160697" /db_xref="GeneID:1114381" CDS 760781..761296 /gene="yhgB" /locus_tag="L160697" /note="similar to YisX of Bacillus subtilis" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266910.1" /db_xref="GI:15672736" /db_xref="GeneID:1114381" /translation="MTINQRTIFSGCSFKNTTFEFTDNTISEFTDCLFEKCDFSNLNF NKIGIYRSIFKSCKLLGTDFTESHLQDLQFTENLMTYANFSGSTLKSVRFLENEAKET FFTACNFKNVELLKNQLEAANFWETALAGIDFSTNQFERMEVTPQLAKNMKISLSQAP FFTSLFGIEII" gene 761403..762713 /gene="engA" /locus_tag="L0156" /gene_synonym="yfgK" /gene_synonym="yphC" /db_xref="GeneID:1114382" CDS 761403..762713 /gene="engA" /locus_tag="L0156" /gene_synonym="yfgK" /gene_synonym="yphC" /note="EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains" /codon_start=1 /transl_table=11 /product="GTP-binding protein EngA" /protein_id="NP_266911.1" /db_xref="GI:15672737" /db_xref="GeneID:1114382" /translation="MSLPTVAIVGRPNVGKSTIFNRIAGERISIVEDIPGVTRDRIYA TGEWLTRKFNIIDTGGIELSDEPFMTEIRAQAEIAMTEADVIIAVVDGETGITDADEA VANILYRTDKPVILVVNKVDNPERRMEIFDFYSLGLGDPYPVSAVHGIGTGDVLDAIV QNLPNEIEEENENVIKFSLIGRPNVGKSSLINAILGEDRVIASPIAGTTRDAIDTHFV DSEDQEFVMIDTAGMRKSGKIYENTEKYSVMRAMRAIDRSDIVLMVINAEEGIREYDM RIAGFAHEAGKGILIVVNKWDTLEKDNDTMKNFELEIRTKFKFLDYAPIVYVSAKTGQ RLNKLPDMIKEIHHAQNLRISSSVLNDVIMDAVAINPTPTDKGKRLKIFYATQVAIKP PTFVVFVNEEELMHFSYLRFLENQIRKAFVFEGTPVHLIARKRK" gene 762819..763631 /gene="yhgC" /locus_tag="L162840" /db_xref="GeneID:1114383" CDS 762819..763631 /gene="yhgC" /locus_tag="L162840" /note="similar to positive regulator GadR of Lactococcus lactis" /codon_start=1 /transl_table=11 /product="transcription regulator" /protein_id="NP_266912.1" /db_xref="GI:15672738" /db_xref="GeneID:1114383" /translation="MVYFKYGKAFHDLRIQHGFSLSAFEELGIAKSTLSNFENGKSML SFDRLDFALQKMNVSPLDYSLMINNGEQDNYISIFDEIEHAYYQRNIKQLQYIYEINK EGSNEQKLIAFSARGLYRRLTIEELNEIEFYLKGVQFWGFFELSILANIGDKLDNSII NNIIDDLRYDKAYYENNLYYRVLIYRFFYKIIFKFIDSEKKEKAQEILMISKQFFMPG DVMSHVIINFAESFYCYYYTDKKQGKMQLQETLKFLKKNRSRRFSKNLKATV" gene 764114..767656 /gene="yhgD" /locus_tag="L164132" /db_xref="GeneID:1114384" CDS 764114..767656 /gene="yhgD" /locus_tag="L164132" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266913.1" /db_xref="GI:15672739" /db_xref="GeneID:1114384" /translation="MYRSKHQKGYTTSHEVKTTRFRTWKSGKKWLYGATVLTLTASTL LPIGNLAFQPKTEKAQAASVSSGTLVPGNTSYDTGGHTYSGTEFANSSNYALYGKAVV ASNWINLVSSTANSVGLGIFNGSVSAISATTGFTLKSTIKVDSGSSLTDFTKSGDAIG VILTGASKAQLAANAQSSQATNDGLGIRGLPNTVFLGRDLYSNLSNVSTGSLTGIDGS ATVNGWTDGPGVVMAIRNTDSSGTLQAANYPSLGSAAPYSPVTNTQNGTAYTFATDTS YALGVASPITSSVQEPITVTWTPDATNTASTGYTSGTLTFNLIAQTTSNGALIGASAV NGGTGGYTLTTHTNLQNSLTVGFVGGTGGNYGNLSVSLNGATITGSKGTEPVPINYLN KVTGQPIPSMAQSSITANVNDTIGAALTAPSSTSPDNNTYTYVVPAAPTGYQANSATT TTVLAANPASTTNTSATTVSNFIVGTTNPNALNVSYTPSQQTVLFNWAKASGTTLANL PNQIAYGATGITDASVVTDNPFSNTTLLSSYATALSNAVPTGYNITQISNGTTTVSGA TTAATLAAFTSQNPTVGATSTLNTYTVTLTAVSQTATYTYGYTSTALNTPAIPAILTS TGTTGGSVTTPTGYNTSPQIPSGYYISAIYAGTSASGTLISSSTTNGTNAAWPSGQVY APTGNQYYIQLAPNTVNVTWFISIDPNPDNDPLNVAQGGFTPTVGSILGGSTTTNYQS QVIDNMNSLTGNTLSTTDNVTYTDGATGIKYIVTGYQYQEGTTTTATNSAPITTYKTF SDLLAAHPYVLAGTKSNRTQLVHLLMTVDQTTITSNSTSGQHVNPATNYIPSSEITSS TDIDGADDDGLSYAINGYNAIVNITGGQTDYWGDATNSLQLSIGTYTENYYALNYLGV QAYTNWLPSHSGGTVSQFLQTLDATSLANDTVTSQTTLEVQDATAITTNNHHIIPRAA SYNPSSDLVGASNADGSSVENIETNPIVNGDAIGVLITDSSGNILWVNNSDISLPTNK LQEVTYIENYYALTAQGLVDYTNWQTTTASGGHTVGDFINSGQATTSDYVKSTTELTV TNFVLPFAGGAGNQFLYLMIGLAAFGALGFYFSQRRKAEMDLEVINKEILGKNDNKRS NIYLTSRHTRPYAKIFHTKNRTHLAQAQRKGTNE" gene 767788..769632 /gene="yhgE" /locus_tag="L167770" /db_xref="GeneID:1114385" CDS 767788..769632 /gene="yhgE" /locus_tag="L167770" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266914.1" /db_xref="GI:15672740" /db_xref="GeneID:1114385" /translation="MKLNSLNKNFALASVSLLALSTLAGFSGLATVNAKTTNVADQVS NGEVAIYAQSAAGNQNPTQNNGLVDSDGNPVNDSGIANNQTGGQAGNTGSTKNDGSQQ TTLEGSTPSTMANVTFSATKYVGTGVPTGVTDPSFTDTTSVAPVTTDASGLADFTGLT DGYYLFHQVTTVNGITTVGDFIVQVSHEDSQAGIVNVYPKLDMSSSAGLGTSATTNAD DNFNGQTPNQIANPNATGNSDQTLTNTDNNAGNENLANGTWTNGSDNQNTTTAAAGNT VNWNVNTVFDSSQTNNGNGTTGVTGTYIVTDQLPNNLVNSSTVTVSTVIVNVTNGSGT KVGTLTPTTDYTITNDGNGKIVVTLTTAGQQHAASLLGSADGALNIIIPSTVKSAIGS ATDSATTTITNAYGADLSTTTAVKSTLNVGGLEMTKTDASTNAALAGATFTVVRADNK EDAQDFVEANAAYFNNSASGGTVTNLTSSKAAFVTGDTSGNANTSATAPVTFTTGKDG IATFNGLNLVDNNTDGSNTTNYYLVEVAAPTGYQLPSVTTAANLTGAVTASTAPAATD TTITNNKPFALPFTGGQGLAGIIAIATVSGVIAFAIKRRKDNEEEVVK" gene 769694..770992 /gene="yhhA" /locus_tag="L169709" /db_xref="GeneID:1114386" CDS 769694..770992 /gene="yhhA" /locus_tag="L169709" /note="similar to putative fimbria-associated protein from Actinomyces naeslundii; integral membrane protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266915.1" /db_xref="GI:15672741" /db_xref="GeneID:1114386" /translation="MMAKKKPKTSRKKGFSFRNLLSIILGIIAIELLFYPIVVNYLAG QQNIKSVQKYDENLSNIGSAKVKELLSQAQLYNAQLYNEYIYDASQHIAWNKPIPNYN NVLKIDTTGMMGFITIPQIKVNDIPIYHGDSEKILGLGVGHVPQSSLPIGGINSHAVL PAHSGRVNDTLFTNLDKLKNGDIFYLHVLNLTLKYKINDIRIVAPNQVSSLSIEKGRD LVTLVTCYPTGINNKRLLVTGERTALSKVTPQEDIQRNQFGYNFWVMFGSAFLMFLGL VYLLWLLFGRKRNLYHVAARKIEKPVLSDGQLVGDFGEGFYLTDSKKLAFQWLDEFAQ KEKLNSEELFLNVYRLKRIKKLSRWIFKDKTENWQNYIKEKQGYGDEKHALVVGPAFT SDKKIMQYVLKTEEALGYIKYIKCLNINKLKKGGGIIDKK" gene 770979..771704 /gene="yhhB" /locus_tag="L171000" /db_xref="GeneID:1114387" CDS 770979..771704 /gene="yhhB" /locus_tag="L171000" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266916.1" /db_xref="GI:15672742" /db_xref="GeneID:1114387" /translation="MTKSSKLMGVLIVTLLLFLGFVSQKAFADSRLIIVKYGLSPGAT GFSENQTTNDGLQINNLPLDNLGNELSVLSGIHYLVYEISPTGDGSELKATNPPPSSY TVLKEVADLATDSNGVASLSVSDGYYLIEEQTNPQKGLLKTALPLVIKAPVSGLNEVY IYPKSSVDKEKTGPPNKPNPAPKPIEVPKAPKSKDDSSKKVFGLLLKTGVASSLLLTS YGFVLFLIIICLKKRRKKEEEVK" gene complement(771778..772476) /gene="yhhC" /locus_tag="L171802" /db_xref="GeneID:1114388" CDS complement(771778..772476) /gene="yhhC" /locus_tag="L171802" /note="integral membrane protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266917.1" /db_xref="GI:15672743" /db_xref="GeneID:1114388" /translation="MNIITTDPLFGFVLTVLVFMIGVRINENFRKPWTNPLLFATVVI ILILSLAHIPYKNYYIGGSIINDLIGPSTVALGIPLYKTFHLMKHHARSIVSSIAIAA LVNCIFTALCAKFFSLSKLASLSIFPKSVTTAMAMGISDKMHGVEQITVVVVVATGIL TSVLGGPLLKLFRITDPVAQGIALGGTGHAVGTGTAIELGKTQGAMAALSIGVTGIMY VIFAPIIAKIILGY" gene complement(772495..772899) /gene="yhhD" /locus_tag="L172519" /db_xref="GeneID:1114389" CDS complement(772495..772899) /gene="yhhD" /locus_tag="L172519" /note="similar to PH1801 of Pyrococcus horikoshii." /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266918.1" /db_xref="GI:15672744" /db_xref="GeneID:1114389" /translation="MKIYLQLLIIFGFSFIGNVISNVFRLPVPGSILGMILLFLALQF KILEFRHVDEAGSFLINNMTILFLPAGVGIMAKWNLISHFWAQILLIVVAALIINMLI LGKLVEWIKVKFEGDYVALKPETTVTSSTEDQ" gene 773172..773645 /gene="yhhE" /locus_tag="L173151" /db_xref="GeneID:1114390" CDS 773172..773645 /gene="yhhE" /locus_tag="L173151" /note="in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266919.1" /db_xref="GI:15672745" /db_xref="GeneID:1114390" /translation="MNDVVKIVEDFIRPHIPQPFELFAVEWEKFGGDMMLSILVDKEG GIEIDETAELSEIISPLLDTISPDPFPTEGYLLEVASPGAERPLRKAEHFAGAVGEYI FVKLYQKINNEKEITGDLVSFDGETLVVDVLDKTRHKNIEIPLSAVAKAQTMVKF" gene 773810..774958 /gene="nusA" /locus_tag="L173813" /db_xref="GeneID:1114391" CDS 773810..774958 /gene="nusA" /locus_tag="L173813" /note="modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination" /codon_start=1 /transl_table=11 /product="transcription elongation factor NusA" /protein_id="NP_266920.1" /db_xref="GI:15672746" /db_xref="GeneID:1114391" /translation="MSKEMLNAFAMLEEQKGIKSEIVIEAIEQAITAAYKRQYGQAQN VKVIFDEKKGNFNVYSTREVVDEVFDSRLEISLEDAHELNPHYEIGDKIMFEEKPKDF ARTAAGAAKQVIMQKMREEERTIIYNEYSRYKDEIIQGTVEKVDARAVYVNLGRVDAL LTKKDQIPQENFHVGDRVKVYVTDVVLTPKGTRVFISRTAPDMLKRMFEKEIPEVFDG TVEIKSIARDAGDRAKVIVQSHDENVDAIGTMVGTKGSRIQGIIRELAGEKMDIIEWS EDKATLVANALKPARIEQVLITADGSSLAVVARDQLSLAIGKRGQNVRLAAHVTNSKI DIKAADEFNLDDYEFVGEDGEEIPTTEVNETLVVEEVVETPEVSESEE" gene 775124..775450 /gene="yhhG" /locus_tag="L175136" /db_xref="GeneID:1114392" CDS 775124..775450 /gene="yhhG" /locus_tag="L175136" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266921.1" /db_xref="GI:15672747" /db_xref="GeneID:1114392" /translation="MKQKKTPMRKSLVSNEQFPKKDLLRIAYNKEGEISIDPSGKAHG RGAYIAILNKEAREAKKKRVFDRAFQTKIADEFYDELITYVEHLVARRELESATYSAD LAPDYD" gene 775453..775758 /gene="ylxQ" /locus_tag="L175450" /db_xref="GeneID:1114393" CDS 775453..775758 /gene="ylxQ" /locus_tag="L175450" /note="ribosomal proteins; synthesis and modification; similar to YlxQ of Bacillus subtilis, supposed to be a ribosomal protein. Located close to the genes implicated in protein biosynthesis." /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266922.1" /db_xref="GI:15672748" /db_xref="GeneID:1114393" /translation="MDKKQQISNLLGIAKRAGKIISGEELVIKSIQSSKATLVFLAND AAANLSKRITDKSNYYEIAVSTLFTEIELSHAIGQNRKVIALVDDGFAKKMESLMNN" gene 775779..778613 /gene="infB" /locus_tag="L0372" /db_xref="GeneID:1114394" CDS 775779..778613 /gene="infB" /locus_tag="L0372" /note="Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex" /codon_start=1 /transl_table=11 /product="translation initiation factor IF-2" /protein_id="NP_266923.1" /db_xref="GI:15672749" /db_xref="GeneID:1114394" /translation="MSDKKRINQIAKETGLTNAELVSAAQTLGFEVKSHSSSVTAEQA EKIIQSAKTGTDQTAKVAEKPVKKSQPKAAESAKKNKEDHPRTFAGKAVVEDPAILAR IKAKEEAEKAAKVEVASTEHPVVTEKPKASEPVKKAEPKVEAKSEPKVEKVETKDNTA TSKAEVKPENVADKKEPVVTEEKKKSLTQKPRIQIKVIKRAEDIKKEQAAARPEKKKF DKNRNDRNNRSDNRRPNQNGNGQGGNHYDKNRSSGQGQNQGQKRDKFASSGSAPATDS FTPATSGKTSRRDRDRKKSDNNRDNTKDGNRKGGPLRVNDNRNQVRNARNSNWNQKGG RGRYQNNQSSSVPATQRKFHELPESLEYEVGMNVQDIAKSIKREPAEIIKKLFMMGTM VNQNQSLDEDTIELILMDYGVTPVKKVEEDKSDIERLFVEDGYLKEENMVERPAVVTI MGHVDHGKTTLLDRFRESRVTEGEAGGITQHIGAYQIKANGKKITFLDTPGHEAFTSM RARGASVTDITILVVAADDGVMPQTIEAINHSKAAGVPIIVAINKIDKPGANPQRVTQ ELTEHGVFPVAWDPENGSEFVEISAKFNQNLDELLDTVLLVAEVQELKADPTVRAIGT VVEARLDQGKGAIATLLVQQGTLHVQDPIVVGNTYGRVRTMTNDLGRRIKEAGPSTPI ELTGLSDVPQAGDHFAVFEDEKAARAAGEERAKRAQLIKRQNTRRVNLDNLFDTLKEG QTKSVNIIIKADVQGSAEALAASLQKIEVEGVKVDIVHSAVGAISESDISLAAASNAI IIGFNVRPTGLAREQAAQEEVDIRLHSIIYKVIEEVETAMRGMLDPEFKEEIIGEAIV RETFNVSKVGTIAGFMVIRGKVARDASVRVIREGVVIHDGAIASLKHFKDDVKEVGNA QEGGLMVEDFNDVEIDDTFEVYKMVEIERK" gene 778883..779242 /gene="rbfA" /locus_tag="L0375" /db_xref="GeneID:1114395" CDS 778883..779242 /gene="rbfA" /locus_tag="L0375" /note="associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock" /codon_start=1 /transl_table=11 /product="ribosome-binding factor A" /protein_id="NP_266924.1" /db_xref="GI:15672750" /db_xref="GeneID:1114395" /translation="MGNSFRSDRVAVEIQREINDILRNKVRDPRVQDVNITDVQLTGD LSQATVYYSLLSNLASDNEKAATALKKATGLFKSELAKRMTIFKIPDLTFAKDESVEY GSKIDELLRGLNNKSEY" gene 779421..780368 /gene="pmi" /locus_tag="L179409" /db_xref="GeneID:1114396" CDS 779421..780368 /gene="pmi" /locus_tag="L179409" /codon_start=1 /transl_table=11 /product="mannose-6-phosphate isomerase" /protein_id="NP_266925.1" /db_xref="GI:15672751" /db_xref="GeneID:1114396" /translation="MKEPLFLNSVLQEKIWGGDHLKEFGYDLPSDKVGEYWAISAHPH GVSTIANGEFKGQKLDQLYASHRELFGDSKKEVFPLLTKILDANDWLSVQVHPDDEYG QKHEGELGKTECWYIISAEPGAEIIYGHNAKSREELAEMIKSGDWDHLLRKVKVKTGD FFHVPSGTMHAIGAGIVILETQQSSDTTYRVYDFDRKNDQGNLRELHIQQSIDVLNIP GDKVPENQFKTEKFADAKITTLVKSNFFDVYKWQIHGDHEFTKVADYTLVSVLDGQGK LTIDGNEYPVEKGAHFILPSNIEKWNLSGQLEIIASNPA" gene 780787..781227 /gene="rmaG" /locus_tag="L180805" /db_xref="GeneID:1114397" CDS 780787..781227 /gene="rmaG" /locus_tag="L180805" /note="MarR-family regulator" /codon_start=1 /transl_table=11 /product="MarR family transcriptional regulator" /protein_id="NP_266926.1" /db_xref="GI:15672752" /db_xref="GeneID:1114397" /translation="MKTDFDKVNEWLIQLFHDFMILEEQFLKDSAYSDVTVKELQILT LVHTLGTCRATDIAKNQKLALSTITITLNRLEDKGYIERKRSTADRRVTHIILTSKGD ELCATHREFFHTITDNLFDSVYGTTENKLAGELATLHDSLENMK" gene 781227..782204 /gene="fabH" /locus_tag="L0182" /db_xref="GeneID:1114398" CDS 781227..782204 /gene="fabH" /locus_tag="L0182" /EC_number="2.3.1.41" /function="fatty acid biosynthesis" /note="FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs" /codon_start=1 /transl_table=11 /product="3-oxoacyl-(acyl carrier protein) synthase III" /protein_id="NP_266927.1" /db_xref="GI:15672753" /db_xref="GeneID:1114398" /translation="MTFAKITQVAHYVPENVVSNDDLSKIMDTNDEWIYSRTGIKNRH ISTGENTSDLAAKVAKQLISDSNLSPETIDFIIVATVTPDSLMPSTAARVQAQVGAVN AFAYDLTAACSGFVFALSTAEKLISSGAYQRGLVIGAEVFSKVIDWSDRSTAVLFGDG AAGVLIEAGASQPLIIAEKMQTDGSRGNSLLSSYADIQTPFASVSYESSNLSMEGRAI FDFAVRDVPKNIQATLEKANLSAEEVDYYLLHQANSRILDKMAKKLGVTRQKFLQNMQ EYGNTSAASIPILLSESVKNGIFSLDGQTKVVLTGFGGGLTWGTAIINL" gene 782371..782592 /gene="acpP" /locus_tag="L0183" /db_xref="GeneID:1114399" CDS 782371..782592 /gene="acpP" /locus_tag="L0183" /function="fatty acid biosynthesis" /note="carries the fatty acid chain in fatty acid biosynthesis" /codon_start=1 /transl_table=11 /product="acyl carrier protein" /protein_id="NP_266928.1" /db_xref="GI:15672754" /db_xref="GeneID:1114399" /translation="MAVFEKVQDIIVDELGKEKEEVTLETSFEELDADSLDLFQIIND IEDEFDVEVDTEADMKTVADLVKYVENNK" gene 782872..783798 /gene="fabD" /locus_tag="L0184" /db_xref="GeneID:1114400" CDS 782872..783798 /gene="fabD" /locus_tag="L0184" /EC_number="2.3.1.39" /function="fatty acid biosynthesis" /note="fatty acid and phospholipid metabolism" /codon_start=1 /transl_table=11 /product="acyl-carrier-protein S-malonyltransferase" /protein_id="NP_266929.1" /db_xref="GI:15672755" /db_xref="GeneID:1114400" /translation="MTKTAFLFSGQGAQKLGMARDLYDQYETVKATFDEASQALGYDL RALIDNDEEKLNETKYTQPAILTTSVAILRLLSENGIKPDLVAGLSLGEYSALVASGI IDFQEAVKLVAKRGQYMTEAAPTGSGKMVAVMNTDPALIEEICQKAAEFKGGIVSPAN YNTPAQIVIGGEVEAVDYAVELLKEAGVRKLIELKVSGPFHTAILKPASEKLALELDK IDFRPFELPLISNTSAKVMENDEVKGLLTRQVMEPVRFYESVETMQKLGATRFIEVGP GRVLSGFIKKIDKNAEIANVENLASFEALINQ" gene 783884..784615 /gene="fabG" /locus_tag="L0185" /db_xref="GeneID:1114401" CDS 783884..784615 /gene="fabG" /locus_tag="L0185" /EC_number="1.1.1.100" /function="first reduction step in fatty acid biosynthesis pathway" /note="catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis" /codon_start=1 /transl_table=11 /product="3-ketoacyl-(acyl-carrier-protein) reductase" /protein_id="NP_266930.1" /db_xref="GI:15672756" /db_xref="GeneID:1114401" /translation="MEIKNKNVFVTGSTRGIGKAIALQFAKAGSNLIINGRSAISEEL LAEFTAYGVKAVGISGDISKSEDAKQMVAEAIETLGSVDILVNNAGITRDGLSLKMSE EDFESVLKINLTGAFNMTQAVLKPMTRARSGAIINISSVVGLMGNAGQANYAASKAGL IGLTKSIAREVAARNVRVNAVAPGFIESDMTEVLSDKVKDAMKGQIPMKRFGMPEEIA TATQFLAEQEYMTGQVLTIDGGVSM" gene 784656..785885 /gene="fabF" /locus_tag="L0186" /db_xref="GeneID:1114402" CDS 784656..785885 /gene="fabF" /locus_tag="L0186" /EC_number="2.3.1.41" /function="fatty acid biosynthesis" /note="fatty acid and phospholipid metabolism" /codon_start=1 /transl_table=11 /product="3-oxoacyl-[acyl-carrier-protein] synthase II" /protein_id="NP_266931.1" /db_xref="GI:15672757" /db_xref="GeneID:1114402" /translation="MTNRVVISGYGVVSAIGNSPEEFWNNLKAGKTGIGPITHFDAEA TGISVAAEVKEFPFDKYFQKKDARRMDTFSLYAVYAALDAMEMSGITEENTNFDRLGC IMASGIGGLEQSQKNSQAIVAKGPRKGVAPLYVPLAIANMATGNVALRTGARGVSRAE VTACAAGANSIGSAFREIKHGYADAMIAGGAEAAICELGIAGFANLTALTKETDPEKA CIPFDKNRSGFVMGEGSGVLILESLEHAQARGANILAEIVGYGNTNDAFHMTTPSGVG AENAIKLALEEAGASPADVDYVNAHGTSTHANEETESKAIHNVIGDKAYVSSTKALHG HALGATGAIEAVATVQALLNQYAPVNAGTTELDEGMTINVVLGEGKPADINLALSQDF GFGGHNAVLAFKKWTGE" gene 785892..786359 /gene="accB" /locus_tag="L0187" /db_xref="GeneID:1114403" CDS 785892..786359 /gene="accB" /locus_tag="L0187" /EC_number="6.4.1.2" /function="first step in long-chain fatty acid biosynthesis" /note="composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism" /codon_start=1 /transl_table=11 /product="acetyl-CoA carboxylase biotin carboxyl carrier protein subunit" /protein_id="NP_266932.1" /db_xref="GI:15672758" /db_xref="GeneID:1114403" /translation="MNISEVKDLMNQFNGSTLREFSWKNADGELSFSKNEGQALVGAQ SAAPTAPAFTAQQATPVAESTEAPVASEAAVEAEGEAVTSPLVGVAYLKPSPDKAEFA KVGDSVKKGQTLLIIEAMKVMNEIPAPKDGVITEIMVSGEDVIEFGQDLMRIK" gene 786486..786920 /gene="fabZ" /locus_tag="L0188" /db_xref="GeneID:1114404" CDS 786486..786920 /gene="fabZ" /locus_tag="L0188" /EC_number="4.2.1.1" /function="fatty acid biosynthesis" /note="in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP" /codon_start=1 /transl_table=11 /product="(3R)-hydroxymyristoyl-ACP dehydratase" /protein_id="NP_266933.1" /db_xref="GI:15672759" /db_xref="GeneID:1114404" /translation="MTEVNINVTEIMEALPHRYPFLLVDRVIDIAEDEITAIKNVTIN EEFFQGHFPQYPVMPGVLIMEALAQAAGVLELSKPENKGKLVFYAGMDNVKYKKQVTP GDQLVLHAKFIKRRGPIAVVEAEATVDGKLAAKGTLTFALGR" gene 787314..788681 /gene="accC" /locus_tag="L0189" /db_xref="GeneID:1114405" CDS 787314..788681 /gene="accC" /locus_tag="L0189" /EC_number="6.4.1.2" /function="fatty acid biosynthesis" /note="an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism" /codon_start=1 /transl_table=11 /product="acetyl-CoA carboxylase biotin carboxylase subunit" /protein_id="NP_266934.1" /db_xref="GI:15672760" /db_xref="GeneID:1114405" /translation="MFNKILIANRGEIAVRIIRAARELGVGTVAIYSTADRDALHVHL ADEAICVGPARSTESYLNMNNILSAAVATGAQAIHPGFGFLSENSKFARLCEEMNIKF IGPSAKVMDMMGDKINARAEMIKAGVPVTPGSEGEVHTTDEAVKIAEEIGYPIMLKAS AGGGGKGIRKVNNVEELVPAFEAAQAEAQAAFGNGAMFIERMIFPARHIEVQILGDSQ GNVIHLGERDCSLQRNNQKVLEESPSVAIGHTLRNEITAAAVKAAQHVSYENAGTIEF LLDESSGKFYFMEMNTRVQVEHPVTEFVSGVDIVKEQIRVANGNELSVKQEDVTFSGH AIECRINAENPKFNFAPSPGKITNLFLPSGGVGLRVDSAMYSGYSIPPYYDSMIAKVI VHGENRFEALMKMQRALLEFDVEGVITNVDFQLELISDPHVVAGDYDTSFLGNVFLPE YQKED" gene 788767..789633 /gene="accD" /locus_tag="L0180" /db_xref="GeneID:1114406" CDS 788767..789633 /gene="accD" /locus_tag="L0180" /EC_number="6.4.1.2" /function="fatty acid biosynthesis" /note="catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits" /codon_start=1 /transl_table=11 /product="acetyl-CoA carboxylase subunit beta" /protein_id="NP_266935.1" /db_xref="GI:15672761" /db_xref="GeneID:1114406" /translation="MALFQKKKYIKINPNRSIIEKQAEQPEVPDELFAKCPACKHTIY QKDLGKNKVCPNCDYNFRITAKERLAIVADKDSFVEMFTGIESKNPLDFPGYPEKLAA TKARTGLDEAVITGTATIKGQKTALAIMDSTFIMASMGTVVGEKLTRLFEYATTEKLP IIVFTASGGARMQEGIMSLMQMAKTSAAVKRHSNAGLFYITVLTDPTTGGVTASFASL GDIILAEPQSLIGFAGRRVIEQTVRQTLPDDFQKAEFLLNHGFVDAIVKRTELRQKLA LLLELHTEVENV" gene 789626..790408 /gene="accA" /locus_tag="L0190" /db_xref="GeneID:1114407" CDS 789626..790408 /gene="accA" /locus_tag="L0190" /EC_number="6.4.1.2" /function="fatty acid biosynthesis" /note="fatty acid and phospholipid metabolism" /codon_start=1 /transl_table=11 /product="acetyl-CoA carboxylase carboxyl transferase subunit alpha" /protein_id="NP_266936.1" /db_xref="GI:15672762" /db_xref="GeneID:1114407" /translation="MSETIDSLTGEVSQKNIADIINEARAADRISARDIIDKVFTDFF ELHGDRQLTDDEAIVGGIARFNNQAVTVIGIQKGRNLAENLATNFGQPSPNGYRKALR LMKQAEKFGRPVITFINTAGAYPGIEAEERGQGEAIARNLLEMSDLKVPIIAFITGEG GSGGALALALANKVYILENAVYSVLSPEGFATILWKDGSRRDEAAELMKITAPHLLEM GLVDAIISEENLKRQLTESLGDLSLLTETELAEQRYERFRKY" gene 790537..791679 /gene="metB2" /locus_tag="L0181" /db_xref="GeneID:1114408" CDS 790537..791679 /gene="metB2" /locus_tag="L0181" /EC_number="2.5.1.48" /EC_number="4.4.1.8" /function="second step in methionine biosynthesis" /note="catalyzes the formation of L-cystathionine from O-succinyl-L-homoserine and L-cysteine; or Cystathionine beta-lyase (CBL) can convert cystathionine to homocysteine" /codon_start=1 /transl_table=11 /product="cystathionine gamma-synthase/cystathionine beta-lyase" /protein_id="NP_266937.1" /db_xref="GI:15672763" /db_xref="GeneID:1114408" /translation="MTSIKTKVIHGGISTDKTTGAVSVPIYQTSTYKQNGLGQPKEYE YSRSGNPTRHALEELIADLEGGVQGFAFSSGLAGIHAVLSLFSAGDHIILADDVYGGT FRLMDKVLTKTGIIYDLVDLSNLDDLKAAFKEETKAIYFETPSNPLLKVLDIKEISAI AKAHDALTLVDNTFATPYLQQPIALGADIVLHSATKYLGGHSDVVAGLVTTNSKELAS EIGFLQNSIGAVLGPQDSWLVQRGIKTLALRMEAHSANAQKIAEFLETSKAVSKVYYP GLNSHPGHEIAKKQMSAFGGMISFELTDENAVKDFVENLSYFTLAESLGGVESLIEVP AVMTHASIPKELREEIGIKDGLIRLSVGVEAIEDLLTDIKEALEKK" gene 791894..792814 /gene="cysK" /locus_tag="L0089" /db_xref="GeneID:1114409" CDS 791894..792814 /gene="cysK" /locus_tag="L0089" /EC_number="2.5.1.47" /note="serine family; there is another potential cysteine synthase cysM in the genome" /codon_start=1 /transl_table=11 /product="cysteine synthase" /protein_id="NP_266938.1" /db_xref="GI:15672764" /db_xref="GeneID:1114409" /translation="MVKIVENITELVGNSPIIKLKNGPENGAEIYLKLEYFNPGGSVK DRIALQMIRQAEADGRLKKGGTIVEPTSGNTGIGLAMAGAALGYNVVIIMPDSYSKER RQIIQAYGAELILTPAADGIKAAIDLGQKLVEENGWFMPMQFENPANLKAHELTTGPE IIEAFGENGLDAFVACAGTGGTISGVSHYLKSQNSKIKTFVVEPAESPILTGGESGPH RIQGIGIPFMSPNLDTKAYDGVIDVTSDEALETARKIGKSEGFLVGISSGAAIWAAYE LAKKLGKGQKVLALCADNGERYLSTELYDY" gene 793043..793282 /gene="yhjA" /locus_tag="L193031" /db_xref="GeneID:1114410" CDS 793043..793282 /gene="yhjA" /locus_tag="L193031" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266939.1" /db_xref="GI:15672765" /db_xref="GeneID:1114410" /translation="MALNDKLDATKDKVSGKVKETTGKVTGDEKLEAKGKTEGLMGKA KEGLENIKDKASDLAEDVAEKFNDTVDSVKHKNEK" gene 793339..793716 /gene="yhjB" /locus_tag="L193291" /db_xref="GeneID:1114411" CDS 793339..793716 /gene="yhjB" /locus_tag="L193291" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266940.1" /db_xref="GI:15672766" /db_xref="GeneID:1114411" /translation="MEIINLTYIPLGVYNYYKSNNQEVKMQTIDISELELLTESENPV IVDVREDFEYNSGHVPNAKNIPLSQLEERYAEITDGTYLICQSGARSARACQYLSTKG IDTINISGGTIAWNGPLEFTDRL" gene 793727..794035 /gene="yhjC" /locus_tag="L193718" /db_xref="GeneID:1114412" CDS 793727..794035 /gene="yhjC" /locus_tag="L193718" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266941.1" /db_xref="GI:15672767" /db_xref="GeneID:1114412" /translation="MFELFKKIKSISPAEVSTELKKGTQLIDVREAHEFQNGHIKGAR NIPLSKLGEHVLAKNKKYLLICQSGMRSKKAYKILNRANYDVTNVNGGMRAWRGKIKK" gene 794032..795675 /gene="noxC" /locus_tag="L194050" /db_xref="GeneID:1114413" CDS 794032..795675 /gene="noxC" /locus_tag="L194050" /note="aerobic energy metabolism" /codon_start=1 /transl_table=11 /product="NADH oxidase" /protein_id="NP_266942.1" /db_xref="GI:15672768" /db_xref="GeneID:1114413" /translation="MTEKILIVGGVAGGMSAATRLRRLNENAEIIVFEKGPYVSFANC GLPYYVGGEIAEREKLIVQSAKALKNRFNLEVRENSEVIAIDSEGKKVTVVSNGESYV ESYDKLILSPGAKPLIPQIKGLNQATNVFSLRNIPDVDKIMTYLKAKAPKSATIIGAG FIGLEMAENLAKRGLSVTIVEKAPHVLPTIDREMAAFVNEELIKNNLSVMTNRGAVEF KNDEILLDNGESLQSDLTILSVGIQPETSLAKSAGIKLGLRNAILVDEHYETSVKDIY AVGDAIVVKNQLGQDALISLASPANRQGRQVADIISGLPIKNRGSLGTAIVRVFDLQV ASTGLSEFQLRGLKINHKIVHVTANNHAGYYPDVTSIVLKLIFEPESGQIFGAQAIGK EGVDKRIDILSTAIKAKLTVFDLPELELTYAPPFDSAKDPVNMAGYAAINLLLGQSEN IQWHELAAELAKGKVLLDVRNPNELAKGKFKNSQNIPLDDLRERLNELDKKNEYIVSC QSGLRSYNAERILKQEGYKVKNLDGAFGLYSKVTKELLD" gene 795702..795956 /gene="yhjE" /locus_tag="L195720" /db_xref="GeneID:1114414" CDS 795702..795956 /gene="yhjE" /locus_tag="L195720" /note="similar to YrkD of Bacillus subtilis" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266943.1" /db_xref="GI:15672769" /db_xref="GeneID:1114414" /translation="MKKYDKKMKNRLKRATGQLTGILKMMESGEECIDVVTQLTAVRS SLDSLIGLIVAENLKELLLDKEVTDKEEKLEQAIKLIIKK" gene 796032..796382 /gene="yhjF" /locus_tag="L196017" /db_xref="GeneID:1114415" CDS 796032..796382 /gene="yhjF" /locus_tag="L196017" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266944.1" /db_xref="GI:15672770" /db_xref="GeneID:1114415" /translation="MYDFYWYPKCSTCRKAKAKLDELGIDYQAIDLKETPPSQKNFEK WFKEADFPIKKFFNTSGLVYRDLNLKDKLATLSEKEMAELLSSNGMLIKRPLLVKNGQ VQQIGFKESSYEKI" gene complement(796549..797292) /gene="rdrA" /locus_tag="L0152" /db_xref="GeneID:1114416" CDS complement(796549..797292) /gene="rdrA" /locus_tag="L0152" /note="DeoR-family regulators" /codon_start=1 /transl_table=11 /product="transcription regulator" /protein_id="NP_266945.1" /db_xref="GI:15672771" /db_xref="GeneID:1114416" /translation="MSRSDEIIRIVSDYKKIEVNQLSQLLNVSNVTIRKDLDKLEEKG IINRQHGFALINNTDDINFRLAKNYDLKRKIAVKAAENILDGDTVMIESGSTCALLAE ELAFNRKNVTIITNSVFIANYIRKSDSVKVILLGGEYQNNSQVNVGPLIKKVVDEFYV DKLFIGIDGFDPVRGFRSNDLARSEAIHVMAAAAKEVIILTDASKFNQNGTVTCFSFP EISQVFTDKSINAGSQKILDLKKIKVTTI" gene complement(797386..797949) /gene="yhjG" /locus_tag="L1015" /db_xref="GeneID:1114417" CDS complement(797386..797949) /gene="yhjG" /locus_tag="L1015" /note="ribosomal proteins: synthesis and modification" /codon_start=1 /transl_table=11 /product="acetyl transferase" /protein_id="NP_266946.1" /db_xref="GI:15672772" /db_xref="GeneID:1114417" /translation="MFMVNINLVLAEHQTLQTERLILRKLQLEDAPEMFNYASNPEVA RFTSFEPHDSLETTRATIAKFFLPNSLYHWGIVEKTSGQLIGEIFLNPINEKTVELGW ILNQDHWGKGIMPEATECLLALSFDKLEVKVIQAKHFTENAKSGRVMEKLGMKHLGKV YSYFPKFKNPLLTDYWAITKDEYDLLH" gene complement(798032..799036) /gene="exoA" /locus_tag="L198056" /db_xref="GeneID:1114418" CDS complement(798032..799036) /gene="exoA" /locus_tag="L198056" /note="degradation of DNA; AP/EXOA family of DNA repair enzymes" /codon_start=1 /transl_table=11 /product="exodeoxyribonuclease A" /protein_id="NP_266947.1" /db_xref="GI:15672773" /db_xref="GeneID:1114418" /translation="MRRFSSKYYTKKPLKSHCLIKFVIIIIEKLRIPLSHSSLEILLK NKGTIMNYKFISWNIDSLNAALTGTSERAALSLAVVKNLAQAQPDVLAIQETKLPSTG PKKAHLEVLEELFKGYKIVWRSSVEPARKGYSGTMILYKETLPEPVITFPEIDAPEPM DAEGRIITLEFPDFFVTTVYTPNAQEGLTRLDLRGIWDDNYRNYLTSLDAQKPVFACG DFNAAYTEIDLANPRGNHNSAGFTDQEREKFGQLLEAGFTDTFRQLHGQVEKFYEEGR SIYTWFAQRAKTSKLNNSGWRIDYWLVSNRLAQAVKVSEPLDSGERLDHVPILLEFEL" gene 799071..801059 /gene="metS" /locus_tag="L0353" /db_xref="GeneID:1114419" CDS 799071..801059 /gene="metS" /locus_tag="L0353" /EC_number="6.1.1.10" /note="amino acyl tRNA synthetases" /codon_start=1 /transl_table=11 /product="methyonyl-tRNA synthetase" /protein_id="NP_266948.1" /db_xref="GI:15672774" /db_xref="GeneID:1114419" /translation="MTENKTFYITTPIYYPSGKLHLGSSYTTIACDVLARYKRLMGFD TFYLTGLDEHGMKIQRKAEELGMTPKEYLDPMAADVQELWKKLDISYDKFIRTTDTYH EEAVAKAFEQLLEQDDIYLGKYAGWYSVSDEEFFTETQLEEIFRDESGNITGGIAPSG HEVEWVEEETYFFRMGKYADWLLQYYDEHPDFIQPEVRKNEMVNNFIKPGLEDLALTR TSFTWGIPVPSNPKHVVYVWFDALLNYITALGYNSDNDSNFKKYWPGINMVGKEIVRF HTIYWPIMLHALGLPAPKKIFAHGWLLMKDGKMSKSKGNVVYPEMLIERYGLDAVRYY LMRAISFGQDGIFTPEDFVGRINFDLANDLGNLLNRTVSMINKYNDGKIEATGVSTEF DASLEEVVEETISHFHKAMDKFEFNVALADVWTLISRTNKYIDETAPWVLAKSEDDKA KLNNVLYHLAENLRIAGALLQPFMRATSGKIFEQLGMDERSFSLENLSFGYSFTHPVV AKGQPIFPRLDVEEEVAYIKLQMAGGVLPEKEWVPEEVELNLTLPQIKFDDFEKIELK VAEVLEVEPVEGSDKLLRFKLDAGDSEPRQILSGIAQFYPNEQELVGKKLQIVANLKP RKMMKKYVSQGMILSAEFDGKLSVLTVDDDVPAGSLIG" gene 801265..801504 /gene="yiaA" /locus_tag="L1178" /db_xref="GeneID:1114420" CDS 801265..801504 /gene="yiaA" /locus_tag="L1178" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266949.1" /db_xref="GI:15672775" /db_xref="GeneID:1114420" /translation="MTFEEALALLKAGKKVVRTQGWSGAENYVKLYDSIVLESDEKLE VTPYFLINVSGEGEGFSMWAPTPCDVLADDWALVE" gene 801521..802252 /gene="fabG" /locus_tag="L1530" /db_xref="GeneID:1114421" CDS 801521..802252 /gene="fabG" /locus_tag="L1530" /EC_number="1.1.1.100" /note="Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis" /codon_start=1 /transl_table=11 /product="3-ketoacyl-(acyl-carrier-protein) reductase" /protein_id="NP_266950.1" /db_xref="GI:15672776" /db_xref="GeneID:1114421" /translation="MKFSGKKVLITGAASGIGLAQTKVFLAEGAEVVAVDLQEFTDES IINSKNLSVKILDVSDAQSVEKLADEVGSIDVLLNTAGVLDAYKTLEETDFAEWQRIL STNLNSMYLMISAFLPKMKAQKSGVIINMASVAGLIAGGGGVAYTTSKHAIVGLTKQL ALDEAQHGIQVAAIAPGAINTPMNAADFTENNGQMAQWVADETPAKRWASPREVADLT LFLASPQASYMSGAIVPIDGGWTIK" gene 802593..803165 /gene="yiaC" /locus_tag="L2611" /db_xref="GeneID:1114422" CDS 802593..803165 /gene="yiaC" /locus_tag="L2611" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266951.1" /db_xref="GI:15672777" /db_xref="GeneID:1114422" /translation="MSLHPFAQAYYRRILSPKENLLKKSKTYDIVTIAIVAALYVILT MTPGLSAISYGPIQFRVSEMLNFTAFFNKKYIIAVTIGCMISNFLSFTWVDVIVGGLS TLVFLSLGVLLFDRFKKDYFWNGQLNKAFFFFAIFFSISMFTIALELKFVAGTPFLLT WGTLALGEFASLFSGAFVMDKLGKRVDLSR" gene 803269..803901 /gene="yiaD" /locus_tag="L3272" /db_xref="GeneID:1114423" CDS 803269..803901 /gene="yiaD" /locus_tag="L3272" /note="similar to YwnB protein of Bacillus subtilis; probably nucleoside-diphosphate-sugar epimerase, evidenced by COGnitor" /codon_start=1 /transl_table=11 /product="putative NADH-flavin reductase" /protein_id="NP_266952.1" /db_xref="GI:15672778" /db_xref="GeneID:1114423" /translation="MKKIAVIAASGKAGSLIAQKAFGRGHEVTAIVRNKARLKVEVTT ILEKDIFELTSEDLAGFDAIVLAHRAPAGHEEDYSKVAHVMIKLLENIDSRLIVVGGA SSLYLDESHEKLLLDVTPTDLPYYPTLLEMAKASLIYEASKLNVTFFSPAEFFDPEGA QTNNYTITGDVLEHNKAGKSRISYADYAEAVLNMIEDGSHQHEHIGIYEN" gene 804041..805063 /gene="argC" /locus_tag="L0104" /db_xref="GeneID:1114424" CDS 804041..805063 /gene="argC" /locus_tag="L0104" /EC_number="1.2.1.38" /function="third step in arginine biosynthesis" /note="catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate" /codon_start=1 /transl_table=11 /product="N-acetyl-gamma-glutamyl-phosphate reductase" /protein_id="NP_266953.1" /db_xref="GI:15672779" /db_xref="GeneID:1114424" /translation="MKKVAIVGIRGYSGLELFRIFYYHPEVEVTKIYATSHYGEKLSE HFPQLEGLTDLTISEFNEEEIMAECDAVFFATSAGVSQKLALTFIDNNFPVIDLSGDF RLADLEIYNKWYKNTNLKNEYLLSGQYNLADIGQAKANYIANPGCYATATLLALYPLV KNKMIDLDSIIVDAKSGLSGAGKGLSDASHFVNVVDNMSMYKINSHQHIPEIAQQLKI WNSNFQALQFSTSLIPVSRGIFVSSYAKVAADFDFETIKNAYEQVYATKNFVRIRRQM PHLSDVIGTNFCDIGLAYNPVTNVLSVVSVIDNLMKGAAGQAVQNFNQLFGYDESLGL KFMPSL" gene 805075..806265 /gene="argJ" /locus_tag="L0105" /db_xref="GeneID:1114425" CDS 805075..806265 /gene="argJ" /locus_tag="L0105" /EC_number="2.3.1.35" /EC_number="2.3.1.1" /function="first and fifth steps in arginine biosynthesis" /note="bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate" /codon_start=1 /transl_table=11 /product="bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein" /protein_id="NP_266954.1" /db_xref="GI:15672780" /db_xref="GeneID:1114425" /translation="MKEIKGTIASPKGFLADAVHAQLKYKNLDLGLILSQVPAAIAGV FTTNKVCAAPVLIDRQIVKKGQARAIICNSAVANAVTGEQGYANALKTQKLLAEKFEL KAEEVAVCSTGVIGVQLPMEKIATGISKLSQNEGTAAYFAKAILTTDTQTKTINFEAE IGGQIVNMAGVCKGSGMIHPNMATMLAFITTDAKIAQALLQKTLSEIIETTFNQITVD GDTSTNDTVLLMANGQAKNNEILEGSSDYLLFKEMLAKVCQSLAKQIAADGEGATKLI EVTVKGAPNDLTARFIAKKIVGSSLVKTAIFGADPNWGRIISSIGQVANFEVSDIELK LQDELVLYHSTPVDFDAAFLSEKLKEDKIEIIADLNAGSGLGQAWGCDLTYKYVEINA LYTS" gene 806278..807411 /gene="argD" /locus_tag="L0106" /db_xref="GeneID:1114426" CDS 806278..807411 /gene="argD" /locus_tag="L0106" /EC_number="2.6.1.11" /function="fourth step in arginine biosynthesis" /note="glutamate family" /codon_start=1 /transl_table=11 /product="acetylornithine aminotransferase" /protein_id="NP_266955.1" /db_xref="GI:15672781" /db_xref="GeneID:1114426" /translation="MTNLFENYGRLPFSLIKGEDQYLFDDRGNKYLDFTSGIGVMNLG YSFEKGKVAVKAQLDSLSHLSNLYQNPLQEDVAEKLSQNHSYKAFFCNSGTEANEAAL KLTHLIKKDQKILAFTDGFHGRTFGAMSATMQEKIQAGFSPLLPNFVASPFNDVVALE QILEKEKIGAIIFEIIQGEGGVLPISPDFVEALKSCQQKGILLIIDEIQTGIGRTGKL FAFEHFDFEPDIFTLAKALANGIPTGAMLAKNKYASYFSAGKHGSTFGGNPLAMASAN EVLKEIDSDFLEKVTDKGIFFLKLLTEKLSVKATVKSIRGLGLMIGIQLTDEKKVPEV LALLRENGLLALSAGHDVIRLLPPLVMTKVELQKGAELLEKIL" gene 807408..808259 /gene="argB" /locus_tag="L0107" /db_xref="GeneID:1114427" CDS 807408..808259 /gene="argB" /locus_tag="L0107" /EC_number="2.7.2.8" /function="second step in arginine biosynthesis" /note="catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate" /codon_start=1 /transl_table=11 /product="acetylglutamate kinase" /protein_id="NP_266956.1" /db_xref="GI:15672782" /db_xref="GeneID:1114427" /translation="MRDSQNTAQTLTESLKYFLKYRDQTVVIKYGGNAMIDEKVKESI LKDILLLKTVGIKVVLVHGGGPAIGELLEKYEQKSQFVQGLRVTDKKTAQLALTALAG KVNKSLVQDIIRLGGNAIGVSGIDGKLIEAKPISEDLDYVGEITAIHPEIIERINQTD AVPVIASAGIGLDGEIYNVNADTAASRIAGALSAEQFILLSDVRGLYGNFPDEESFID EINLTNLEKLVKEKKITDRMIPKIEAIKYAMFEGLGQAVLLDGRVPHALLLELFTDKG QGTMINH" gene 808287..809288 /gene="argF" /locus_tag="L0108" /db_xref="GeneID:1114428" CDS 808287..809288 /gene="argF" /locus_tag="L0108" /EC_number="2.1.3.3" /note="catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway" /codon_start=1 /transl_table=11 /product="ornithine carbamoyltransferase" /protein_id="NP_266957.1" /db_xref="GI:15672783" /db_xref="GeneID:1114428" /translation="MFQGRSFLKEIDFSKDELLYLIDFAIHLKKLKKEHIQHKYLLDK NIALIFEKTSTRTRAAFTTAAVDLGAHPEFLGPNDIQLGKKESISDTAKVLGSMFDGI EFRGFKQSDVEILAKDSGRPVWNGLTDVWHPTQMLADFMTIKEHFGHLQDLTLAYVGD GRNNVANSLLVTGAILGVNITIISPESLQPALEIQKLARKYAMKSRSKISIRTDLNGL ENADIVYTDVWVSMGEEAQTAKRIKLLKSYQINQKVVEKIINKNFIFMHCLPSFHDLN TEVMKEIKENYNLNELEVTDEVFNSKNSVVFEQAENRMHTIKEVMAATLGDLFIPKI" gene 809461..810156 /gene="rnc" /locus_tag="L0326" /db_xref="GeneID:1114429" CDS 809461..810156 /gene="rnc" /locus_tag="L0326" /EC_number="3.1.26.3" /function="processing of ribosomal RNA precursors and some mRNAs" /note="cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity" /codon_start=1 /transl_table=11 /product="ribonuclease III" /protein_id="NP_266958.1" /db_xref="GI:15672784" /db_xref="GeneID:1114429" /translation="MLKLQKKLKNDYGLVFNDEDLLKTAFTHSSFTNEERLPKIANNE RLEFLGDVALSLVISDYLYRTYPEKLEGELSKMRSSIVRTESLANFSRSCGFGEFLRL GHGEEKMGGRDRETTLENLFEAFLGALFIDQGMDEVRKFIQHVVIPHVKNDDYVKVID YKTELQEVLQIGGETTISYKILKEEGPAHDRSFVAAVFNNGKELGRGLGKSKKVAEQK AAENAIKGQNHVS" gene 810146..812920 /gene="smc" /locus_tag="L10155" /db_xref="GeneID:1114430" CDS 810146..812920 /gene="smc" /locus_tag="L10155" /note="cell division" /codon_start=1 /transl_table=11 /product="chromosome segregation SMC protein" /protein_id="NP_266959.1" /db_xref="GI:15672785" /db_xref="GeneID:1114430" /translation="MYLKKMEIVGFKSFADKTKVEFDKGITAVVGPNGSGKSNIVEAL RWVLGEQSAKALRGGKMPDVIFAGTEKRRALNYAEVIAHFDNSDHYLQGQDENEEVVI TRRLYRNGDSEFLMNGRKCRLRDIHDLFTDTGLGRDSLSIISQGRIESVFNSKPEERR AIFEEAAGVLKYKNRRNETESKLNSTQDNLDRLEDIIFELNSQLVPLQSQRDTALRFQ ELEAERSDLSLSVLVGQLESKKAKYDQTELDLAQVAQELASLSTRKKVYDEQVSQLRT ERQKVEAEQEKLQADQLNFSNLKSDLTRKIELFDVQKDSSEKSAAEREERLENLKSRL EITQQNLAEVQKKSELLLTEKNDLDKLLTELSADLATLSESPEVVMERLRDEFVQLVE EEAQISNEIVRNKAEITDLSRRQSEQDESVRENLTKFEKISQDLSEAQENLNTVKKEI ETLLAKFEEGNQAEKKQAELERLAQNKMYDYLQELNQHKARLTSLQNIRESHSNLFAG VRAVMQNASQIGGVIGVVSDLLTFDPKYTTAIDIALGGGSQNVVTEDENAAKRAIAFL REKRLGRATFLPLTTIKGRDFNGLNRIQNMTGFVDLAINLVSFESRLHKAMSSLLGTT VIVDSGENATAIARAMNYNVRIVTLDGTQINPGGSYAGGAGKRNSTTFTSVEISNLEK QTKLSEEQLKISEKEVQKAQSARQELLKEIELLKTQGEEKRFVEQSLNLKIEQLTEQK VALEQLTNLSANQEATGNLLELTKENEHKVEVLAKITERKAEIEKQLEEVKTNSQAHK ALQSEKTSALNQAQLRQSEVVSELKFTKADEKRLLTDLSALTEEKNQLIALLNPVQFD ETERNNFSKQLTEVEERLSQINVRMVSLKFEREDLAAQMEDLEHHNQDFIQQTQELNT KKTRYEMQLE" gene 812936..813670 /gene="yibB" /locus_tag="L12942" /db_xref="GeneID:1114431" CDS 812936..813670 /gene="yibB" /locus_tag="L12942" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266960.1" /db_xref="GI:15672786" /db_xref="GeneID:1114431" /translation="MTLQETLNSEYQISFEEAQATAKIVDDLAEAEQKLKNLERQIKA LGPINLDAIAQFDEVNERFTFLSSQKDDLLEAKNLLLSTIDDMNDEVKIRFKTSFDAI RESFKTTFAQMFVSGLADLELTSDNLLEAGVEIKVQPPGKKLSSLNLMSGGEKALTAL ALIFAILRVRTVPFVVLDEVEAALDEANVKRFGDYMNHFDNSNQFIVVTHRRGTMAAA GSMYGVTMADAGVSKMISVKLDSAIN" gene 813912..816080 /gene="yibC" /locus_tag="L13927" /db_xref="GeneID:1114432" CDS 813912..816080 /gene="yibC" /locus_tag="L13927" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266961.1" /db_xref="GI:15672787" /db_xref="GeneID:1114432" /translation="MSIFSGDNKLKKLLSAFNTRVGLLSFIVFFVWVKSMIAYFGVFN LRGVGPAELLLMIINPIGFTAICFAVLLFIRRTSLFYLATLVLTIAANFLLYLNILYY REFTDFITIDTMTGGAGMFQHGFDFGSVPVHLMDWVYWIDLVVIIVLLIAKKMKFDQR PVGAKRAFTYFSMGLALFGLNFWFGDFNKHQLILRKAQSDKTYIVRYLGLGPWMLTDG YYTNLANTQRKDASKERLQEIQKYIASNRYLAPNLKMYGIAKNRNVIEIHLESFQQAL IDLKIKGTDGKEHVVTPFLNSIYHSNSTYSFSNFFNQVGQGKTSDAENLLETSTFGLP AGSLFAKYGSTQTFQAMPAILNQTDGYSSAVVHGNVGAFYNRLNTYKQMGYQNFFDQS FFDNSASNMSPWGIKDKLLFRDSVPLLEQMQQPFYVKYLTVTNHLTYTMDDEDKDPNF ATVDSGNKLVDGYFETAHYLDQAVQQFYDYLKKSGLYDKSIIVLYGDHYGISGSDNKA FAPYVGYNADTFNSYDSTMLQRTPFMVDIPGQTNGHIINTYVGQLDVMPTLEHLLGID TKKYVQFGQDMFASGRQDFVALRNGGFVTPTITQPSLNGNYYDTQTGLQIEKLNAQQE QYVKETKQKVSDLLKASDKLNNQNLLRFYTPEGFKAVDPKDYNYTVKATEKRLKKENE DLAARSNSLLSQNQGKSTLPDYSVEIPEVEKGQDSPKVKD" gene 816171..816581 /gene="yibD" /locus_tag="L16147" /db_xref="GeneID:1114433" CDS 816171..816581 /gene="yibD" /locus_tag="L16147" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266962.1" /db_xref="GI:15672788" /db_xref="GeneID:1114433" /translation="MKTGYFLPVSLNHRLVLLWGIIILSFERTLFYEFNKEGNWFLTI LAIVSYIIFITLIWPHRFFIADDELHFTTFPRVRMKTIELKYITAVKTTKFGFGFSYA GKRYQFFTFGKSKEALATLHDTIEHSDKVSDLKA" gene 816609..817790 /gene="yibE" /locus_tag="L16606" /db_xref="GeneID:1114434" CDS 816609..817790 /gene="yibE" /locus_tag="L16606" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266963.1" /db_xref="GI:15672789" /db_xref="GeneID:1114434" /translation="MICHKKIGLKFIVLVDEKRKVMNIKWIFKKMLLPIIFAIVAFFL VSHDQFLYEAPVGKITVAKTVSSHEVSDDFQNKDRQVTQELSIKVLNTKGAEPGNLNL KNTTTLSQTTGKIYRVGQQVILKKISGNYQIVTLKRDALIVGLLVLFIGFVISFERFR ASIFLFLSLVLNLLYFVIVIALNVEFNPPVILLFGILSVIFAASSLLFVLGPTKQMLY TFITTVLTTALTFSIVLFVLKMTGNSGIHFEYLDYVTQNPSEFFFVGTMISVLGAIMD GTGDIVAGLFGMARQNKLNKINMVRKDYIKSGISIGQELIGTLTNVLFMIFMAETLPM TLLLLRNGNSWSYIATVGLNLGLLQTIISAIGIVLAVPITAVFTSFALTRSHQGKESS L" gene 817787..818548 /gene="yibF" /locus_tag="L17781" /db_xref="GeneID:1114435" CDS 817787..818548 /gene="yibF" /locus_tag="L17781" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266964.1" /db_xref="GI:15672790" /db_xref="GeneID:1114435" /translation="MNALLILLILLIVLMLIVAKKDGLRNLIGLTFNFIAIFVLITLI SWGFNAIAVLIVLSVIILAIAIFMSADESEVTLIAFKTSIIVVLSLLILALIIQHFGQ FQGFATEDVDELENLSLNVGLNFSNVAIVVMVISMLGAVAESAMALAASLSEVVEQDE NMSLDQFKNQREIISQQILGTAVNTLFFGVLGATVGLILWFVRLNYRLADIFNSKLLM AEVAAMLLGMLGILFAIWLSGYFVQKSFEQKNTDR" gene complement(818598..819938) /gene="yibG" /locus_tag="L18622" /db_xref="GeneID:1114436" CDS complement(818598..819938) /gene="yibG" /locus_tag="L18622" /note="transport and binding protein; amino acids, peptides and amines; similar to many amino acid permeases" /codon_start=1 /transl_table=11 /product="amino acid permease" /protein_id="NP_266965.1" /db_xref="GI:15672791" /db_xref="GeneID:1114436" /translation="METNQSLKKKMAARHITMIALGGAIGAGLFKGSSSAIAAAGPSV LIAYFIGGIVLYFVMKSLEKLVLSSKDPHGLSGLVQPYLGNHTADFTDWVYWSMWMIN IIAEAVAAASFLQLWFANVPTWVFVLIIALLTSLINLFSVALFAETEYWLAFIKISVV ILLIIFGVFLVAKQIFDTNLVTTFSGMTAHGGFAPHGFKGVINSLLIVIYSYGGSELI AITVSETEDPKRAIPKAIRGVIGRIISFYIIPMFLLLVIYNWQTLATSSMSPFVMVFN KMHIPFAGDIVNLIIILALFSSINSGIYASSRLLYFRLKNRQGKMAQRMAHLNKHHVP QRAVIFCSGTLYIGVVLSYFVGDRLFNYLAGSLSYTVLAVWILISLAGFGLSLKTKSL SGRTMSLLALIALFLILIGILFTNPIGVTVFTAILYFIIFISYQKKNDSVSNLN" gene 820452..822542 /gene="yicA" /locus_tag="L20470" /db_xref="GeneID:1114437" CDS 820452..822542 /gene="yicA" /locus_tag="L20470" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266966.1" /db_xref="GI:15672792" /db_xref="GeneID:1114437" /translation="MINSMIKKKYKILLLVLSAAILCINFIFILNLNRFSGYTGDDFL YHFVYTGAWPSEHLREYHNLWDWILAVHTHMLIWNARMTSIIFEIFAMQIPKGLFNII NSLIYVLIGLLINVLVSGKKAFLKPSHLSLTFLLMWFFLPGMGSTVLWVSGATNYLWP SLVIILFLLAFRFDIAARSNWISLGLFILGLLTGLTNEVGGATAFLLALLFTIFNYRR QPSERVLTQIFGVLGAGIGFFIQLLLSSGSSETQNYGKSAGFLQHLSDVFTGTMQYSG FLLLPIILLGGLLYLRRIQWTEKVKTLVITSLLFLGSALAGSIAILASPISPARLWFA PNILLIITLLLLIEAWQELRLQEIKTSLPVIISIIILAFVAIPSYAYNLKEIQASYQY FYTGQSMAQKAKKGKETTARVPGMPITTNPYNPYAGTPYIAASEHPEKEWVNTWFAKY YGLNKVYLDNTVPLQKVADKNFRLVTWTINNYDKYLGDFQKATLPIAPKIILKRESSS NLITSPSNLKPNNSNLPADKPWLRNALIRYVNVKNNQVVATEQITSPYNDAYDISHAS TKGYQTLKNNPKSYIFNQSFEQTIDIKVSPEVHLITLFFNAKDGKNVSTTNTKGVTGE VLTIKLPAGYQINGSKTMTLSIDSEISWNKEIKMTKIPFWKDWGRFSNFYILMIGFLI FGLYDYWLNQKMKK" gene 822669..823478 /gene="yicB" /locus_tag="L22687" /db_xref="GeneID:1114438" CDS 822669..823478 /gene="yicB" /locus_tag="L22687" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266967.1" /db_xref="GI:15672793" /db_xref="GeneID:1114438" /translation="MNKEIKLIALDLDGTLLNSSKEISKENRLAINAARQKGVQVVLT TGRPLIAIQPFLKTLEMLDFEDFSITFNGGLVQRNTGQILSKKSFSHDEILEIKELTS NLGIPCDVLSEEKVYMTKSKIDSQYDTLNKLLTFIKVDFDQVPLDVVYNKIVSCTEKE LLDASLDKIPESYFDQFEIFKTQAKLLEFMPKGINKAYGLTQLINQLNLKPENVMAMG DEANDLSMISWAGYGVAMANAVPAVKEEARIISDLTNDQHAVAHIIEKYVL" gene 823488..824039 /gene="yicC" /locus_tag="L23500" /db_xref="GeneID:1114439" CDS 823488..824039 /gene="yicC" /locus_tag="L23500" /note="integral membrane protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266968.1" /db_xref="GI:15672794" /db_xref="GeneID:1114439" /translation="MKDEVQLKKYLPSLIFAIILPVIAYLFLKMLGNSDTLALGIATA FPVVHMLWSLIRKKELNPVSLVAIIGFLISLLAVYLTHGNNLAFKLWHPILTAAIGTI FLLSVLLNRPLLELASEGENHRKMLIMTLFMGLVFIFHALSVILLAFFVETTAFVLLS KVIDFSAVGVLVLGLAFLRKKLN" gene 824101..825480 /gene="ftsY" /locus_tag="L0206" /db_xref="GeneID:1114440" CDS 824101..825480 /gene="ftsY" /locus_tag="L0206" /note="cell division protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266969.1" /db_xref="GI:15672795" /db_xref="GeneID:1114440" /translation="MGLFDRLFGKKKQEETNHDVPVSENQSSEITETVKNEKENETTK RPEVNEVPAKVEKVTDESVSKMIDVEPEITDEPVSENEPIISEKVEVEVTDEQIVKPE NDEKLEKITDEKVISETTEVTEKKVTDEDEEEEIVIDIDALANIFTQSREETEKKYEQ SLTLTRKTFSDGFNELFANFRTVDEEFFEELEETLIMSDVGVDLAMEVTEELRKEAKL VNAKSTDDLRQLIIEKIVDKFDGEKLPTKLDIQSDGLSVFLFVGVNGVGKTTTIGKLA ARYKNEGKKVLLAAADTFRAGAIDQLVEWGNRSGVEVVTKPAGSDPAAVVFDALAKAK AENYDILLVDTAGRLQNKDNLMKELEKIGKVIKREIPDAPHETILALDATTGQNAIQQ AKEFSAVTPITGIALTKLDGSAKGGIVLSIVQSLKIPVKLIGLGEKLNDLQDFDEEFF VRGLFKELL" gene 825656..826630 /gene="prsA" /locus_tag="L25614" /db_xref="GeneID:1114441" CDS 825656..826630 /gene="prsA" /locus_tag="L25614" /EC_number="2.7.6.1" /note="salvage of nucleosides and nucleotides; used by de novo and the salvage pathway; there is another paralog prsB" /codon_start=1 /transl_table=11 /product="ribose-phosphate pyrophosphokinase" /protein_id="NP_266970.1" /db_xref="GI:15672796" /db_xref="GeneID:1114441" /translation="MSYSNLKLFSLSSNHELAQKVAKEIGIELGKVSVGAHSDGETVV HIDESVRGDHVFILQSTSDPVNDNLMELLIMMDALRRASAASINIVLPYYGYARQDRK ARAREPITSKLVANMLQIAGADRLITFDLHAPQIQGFFNIPVDHLMGSPLIAEYFRRQ LVSAGDDIVVVSPDHGGVGRARKLANFLKAPLSIIDKRRPRANVAEIMNIIGDVQGKK CILIDDMIDTAGTITLAANALKELGATEVYASCTHAVLSGPAIERINNSAITKLVVLD TIEMPEERQSEKIVQLSIAHLLADAIIRIHERRPLSPLFELHLPSEQI" gene 826703..827374 /gene="yicE" /locus_tag="L26721" /db_xref="GeneID:1114442" CDS 826703..827374 /gene="yicE" /locus_tag="L26721" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266971.1" /db_xref="GI:15672797" /db_xref="GeneID:1114442" /translation="MELEKIRKLYEKVDPSQLTEREKLLTELIFTDRKLKTDKLPNGR YRILQFSGNNFEELENTLKLLLPDFVKSIGEEKIVIEAFSTDSPTNSELFDIFQTLSQ DMGEEVTAYVGRFVEKNKLSEVYSEEYKIFESQQTFSEYILSESLNLSENRILQEIRK ELLENPEDQKLVEAMYKASSNQTKAAKILYVHRNTLINKIKKYEQKYGLQLSGSDLTL AYNLL" gene 827445..829934 /gene="leuS" /locus_tag="L0352" /db_xref="GeneID:1114443" CDS 827445..829934 /gene="leuS" /locus_tag="L0352" /EC_number="6.1.1.4" /note="leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase" /codon_start=1 /transl_table=11 /product="leucyl-tRNA synthetase" /protein_id="NP_266972.1" /db_xref="GI:15672798" /db_xref="GeneID:1114443" /translation="MEYNHQEIEAKWQKYWADNKTFRTGTDKNKPKFYALDMFPYPSG AGLHVGHPEGYTATDILSRYKRAQGFNVLHPMGWDAFGLPAEQYAMDTGNDPAEFTAE NIANFKRQINSLGFSYDWEREVNTTDPNFYKWTQWIFTKLYEKGLAYEAEVAVNWVEE LGTAIANEEVLPDGTSERGGYPVVRKPMRQWMLKITAYAERLLEDLEEVDWPESIKEM QRNWIGKSVGADVTFEVAGTDKSFEVFTTRPDTLFGATYAVLAPEHDLVDAITTPEQK EAVAEYRRKASLKSDLARTDLSKEKTGAFTGAYAINPINGRKMPIWVADYVLASYGHG AVMAVPAHDERDWEFAKVYGLEILPVVEGGNVEEAVYTEDGPHINSEFLNGLDKAQAI EKAIEFLEEKKIGKKKITYRLRDWLFSRQRYWGEPIPIIHWEDGTSTALSEDELPLVL PVTSDIKPSGTGESPLANLTDWLEVTRADGLKGRRETNTMPQWAGSSWYYLRYIDPNN SEALADPELLKEWLPVDIYVGGAEHAVLHLLYARFWHKVLYDLGVVPTKEPFQKLFNQ GMILGTSYRDHRGALVATDKVEKRDGGFYHMETGEALEQAPAKMSKSLKNVVNPDDVV EHYGADTLRVYEMFMGPLDASIPWSEEGLEGARKFLDRAVRMIENSEIKAENNGELDK VYNETVKNVTERLDLMYFNTAISQLMIFVNAVNKAKALPLEYANGFVQLLAPFAPHIA EELWVKLGNEAGISYVAWPTFDESKLIESEVEIVVQINGKLKAKIKIAKDLAREELEK IGRESVAEALEGKNVVKVIAVPNKLVNIVVK" gene 830200..830955 /gene="yidA" /locus_tag="L30185" /db_xref="GeneID:1114444" CDS 830200..830955 /gene="yidA" /locus_tag="L30185" /note="RpiR family of transcription regulators" /codon_start=1 /transl_table=11 /product="transcription regulator" /protein_id="NP_266973.1" /db_xref="GI:15672799" /db_xref="GeneID:1114444" /translation="MIDFLPEQVRTLNELETATFNFILSNLSSIDKMSVRQLAQAVHV STATVMRMTRKLGFEGWVELKYYLKNQNQLTEIPVNYYENLLQLDLFLRKITSKEAGR KLEEAVKLIREARYIIFIGVGSSGALAEYGARYFTNIGLESYAISDPYQAVKGKGAPD VLSIVLSASGETDKIIERVVKLREEAPAKIISITNHPETTLSKLSNINLTYGFQTEYS AYDPLENLTSQLPVIAFIEILAHQAMEKADKCN" gene 831369..832787 /gene="yidB" /locus_tag="L31294" /db_xref="GeneID:1114445" CDS 831369..832787 /gene="yidB" /locus_tag="L31294" /EC_number="2.7.1.69" /note="transport and binding protein; PTS system" /codon_start=1 /transl_table=11 /product="cellobiose-specific PTS system IIC component" /protein_id="NP_266974.1" /db_xref="GI:15672800" /db_xref="GeneID:1114445" /translation="MNGFINNKVLPPIMKFVNTRAMTALKNGMLFAMPFIIVGSIFLI LANIPIPPVAKWLSDNGWSAIFTQAFNVSFGILAIWAAVGIGYSYVKEAGFGDVALQG GLTSLSAFFIVQSLSIANPITAALATGKEASGIGNLTGTQATAAFEKLPHAMQVFLNN PVTGVLNLTWNGGQGMIAAIIIGILSGWAYSAMMKAGWKITLPEQVPSNVANQFTSMI PTGVIVVAATVVYALFDKIGHTDAVTFIYHWLSVPLQGLGGSFGGIIIISLLVPFFWF FGVHGGIIMGAITSAFLIPNTFANASLYQSHKLSLANGAHIVTNEFYNNFINLSGSGI TFGLIIFTIFFARSEQMKSIGKVELVPGLFNINEPFLFGLPLVLNPVLALPFFLVPVV VSATVYGAIYFHIVPPMNGVAAPWTTPPIISGFLIGGWQYAVLQVIALLESILIYLPF AKKYDKMLLEQEANAEVEEVIA" gene 832872..834233 /gene="yidC" /locus_tag="L32812" /db_xref="GeneID:1114446" CDS 832872..834233 /gene="yidC" /locus_tag="L32812" /note="energy metabolism, Sugars; beta-glucosidase protein family" /codon_start=1 /transl_table=11 /product="beta-glucosidase" /protein_id="NP_266975.1" /db_xref="GI:15672801" /db_xref="GeneID:1114446" /translation="MENKMPKDFFWGNSTSSMQTEGGWNEGGKGPSVYDVNTVGRSAK DWQVTNDNYHHYSQDLDLMKEMNMNMYRFQISWSRIVPDGDGEFNEEGIAFYNRLIDD LLARGIEPMICLYHFDMPLNLAEKYNGFLSRKVKEAFVRFGQEMMKRFADKVKYWIVF NEHNLYFADGFEHYSGVLKKELTLSDMYTVFHHTMLAHCELTQFLHENFEAKIGGMLA TTEIYPATFSPKDNLYLRKFDEFYNRNLCDVYAFGHYSHEVMTYVKNQNIQMDFQKGD EEILKNGISDFISFSYYRSILLDASQLTENDAPNSYLTKGMKLNPLLEHNQWDWSIDP EGFRRILSRLYNEFGLPVFPIENGIGQSEIWDGKTKIADDLRISYHQKHLEAMKKAIF TDGVEVMGYLGWGLIDIPASSGAIDKRYGAVYVDSKSHKRIPKKSFHWFKNVFASNGD HLD" gene 834485..835288 /gene="cpo" /locus_tag="L34494" /db_xref="GeneID:1114447" CDS 834485..835288 /gene="cpo" /locus_tag="L34494" /note="adaptations and atypical conditions; belongs to chloro/bromoperoxidase family." /codon_start=1 /transl_table=11 /product="non-heme chloride peroxidase" /protein_id="NP_266976.1" /db_xref="GI:15672802" /db_xref="GeneID:1114447" /translation="MSFFTTNDLVKINFHDYGIQLNQPLILIGGYSSSEVTWFAQIET FVNAGYRVITYDHRSHGDSQQVDYGLTLHRLAMDLKELIDYLQLKNVVLIGHSMGAAT IMAYEELFTDENVSAIITEDQAPTFFKSADWLNGQYGKTLTELSVFIDDFPKTRLTQK KLSDSVKRTLGHGMKPFDFKRYRPLLQNVILQDWRPELGQEKKPHLFFAGEKSPIFPA IHAQAARELQNNPNSEVQIFEGCGHILHLEEIEKFNQAVIVFLNKIKKD" gene 835448..835810 /gene="yidE" /locus_tag="L35466" /db_xref="GeneID:1114448" CDS 835448..835810 /gene="yidE" /locus_tag="L35466" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266977.1" /db_xref="GI:15672803" /db_xref="GeneID:1114448" /translation="MKNNNMELAQDSKTDDQQKPKHFKIETTVMKLVVDSYLHGAQTC EVQKGKILGVSIHQGACDSIHLFINDDHKVTVEVSQGISRISLMQKKNIEDIDYILPF MKCLGVSEGQVLKNYSII" gene complement(835893..836654) /gene="tra904F" /locus_tag="L0462" /db_xref="GeneID:1114449" CDS complement(835893..836654) /gene="tra904F" /locus_tag="L0462" /experiment="experimental evidence, no additional details recorded" /note="evidence experimental PMID:1328163; transposon related function; IS3/IS150/IS904 family transposase" /codon_start=1 /transl_table=11 /product="transposase of IS904F" /protein_id="NP_266978.1" /db_xref="GI:15672804" /db_xref="GeneID:1114449" /translation="MHRRPSKQQVEREILSEKIKAVFHEHKGRYGAVRITKVLHNTGI MTNTKRVGKLMHLMGLYAKGSRYKYKHYNRKGASLSRPNLINQIFKATAPNKVWLGDM TYIPTKEGTLYLAVNIDVFSRKIVGWSMSSRMQDKLVRDCFLQACGKEHPQPGLIVHT DQGSQYTSSRYQSTLRQVGAQSSMSRKGNPYDNAMMESFYKTLKRELINDAHFETRAE ATQEIFKYIETYYNTKRMHSGLDYKSPKDFEKYNS" gene complement(836750..837040) /gene="yidF" /locus_tag="L36774" /db_xref="GeneID:1114450" CDS complement(836750..837040) /gene="yidF" /locus_tag="L36774" /note="transposon related function" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266979.1" /db_xref="GI:15672805" /db_xref="GeneID:1114450" /translation="MARRKFDKQFKNSAVKLILEEGYSVKEVSQELEVHANSLYRWVQ EVEEYGESAFPGNGTALADAQHKIKLLEKENRYLQEELELLKKFRVFLKRSK" gene complement(837114..837932) /gene="tra1077E" /locus_tag="L0470" /db_xref="GeneID:1114451" CDS complement(837114..837932) /gene="tra1077E" /locus_tag="L0470" /experiment="experimental evidence, no additional details recorded" /note="evidence experimental PMID:1328163; transposon related function. IS3/IS150/IS904 family transposase" /codon_start=1 /transl_table=11 /product="IS1077E transposase" /protein_id="NP_266980.1" /db_xref="GI:15672806" /db_xref="GeneID:1114451" /translation="MKVTGFPKATYYYWVNCFERVNKDELIEKEMLKIRQEHANAGYR PMRELLKQRGYHVNHKKVQRLMKKLGLRVTSYWHKSRKYNSYKGKVGTVAKNKLHRRF RTSIPHQKITTDTTEFKYYEDGIQKKCYLNPYIDLFNSEVISYHISKQPSYQSIDIAL NQALAVTSDCPYRRTFHSDQGWGYQMRDYVSKLKSHRIFQSMSRKGNCHDNSVMENFF GLLKQEIYYGHIFSSFEELEQVIVIWIRYYNTKRIKQKLNWMSPIQFRLNYQNN" gene complement(837929..838486) /gene="yidG" /locus_tag="L174282" /db_xref="GeneID:1114452" CDS complement(837929..838486) /gene="yidG" /locus_tag="L174282" /note="transposon related function" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266981.1" /db_xref="GI:15672807" /db_xref="GeneID:1114452" /translation="MVKYSIELKQRIIQDYLSGKGGSTYLAKLHNVGSSSQVRHWIRN YRAEGLPTAHSKVNKNYSMELKENAVQCYLTTDLTYEAVARKFEITNFTLLASWVNHF KIYGEVPISKKRGRRKKLESIASSMTQNPNDSQRIKELEQELRYAQIEVAYLKGLRRL EKNALMNKNQDSSTVSVKPSNSKKS" gene 838561..838851 /gene="yidH" /locus_tag="L38510" /db_xref="GeneID:1114453" CDS 838561..838851 /gene="yidH" /locus_tag="L38510" /note="transposon related function" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266982.1" /db_xref="GI:15672808" /db_xref="GeneID:1114453" /translation="MARRKFDKQFKNSAVKLILEEGYSVKEVSQELEVHANSLYRWVQ EVEEYGESAFPGNGTALANAQHKIKLLEKENRYLQEELELLKKFRVFLKRSK" gene 838947..839708 /gene="tra904G" /locus_tag="L0463" /db_xref="GeneID:1114454" CDS 838947..839708 /gene="tra904G" /locus_tag="L0463" /experiment="experimental evidence, no additional details recorded" /note="evidence experimental PMID:1328163; transposon related function; IS3/IS150/IS904 family transposase" /codon_start=1 /transl_table=11 /product="transposase of IS904G" /protein_id="NP_266983.1" /db_xref="GI:15672809" /db_xref="GeneID:1114454" /translation="MHRRPSKQQVEREILSEKIKAVFHEHKGRYGAVRITKVLHNTGI MTNTKRVGKLMHLMGLYAKGSRYKYKHYNRKGASLSRPNLINQIFKATAPNKVWLGDM TYIPTKEGTLYLAVNIDVFSRKIVGWSISSRMQDKLVRDCFLQACGKEHPQPGLIVHT DQGSQYTSSRYQSTLRQVGAQSSMSRKGNPYDNAMMESFYKTLKRELINDAHFETRAE ATQEIFKYIETYYNTKRMHSGLDYKSPKDFEKYNS" gene 839911..841170 /gene="noxA" /locus_tag="L39857" /db_xref="GeneID:1114455" CDS 839911..841170 /gene="noxA" /locus_tag="L39857" /note="aerobic energy metabolism" /codon_start=1 /transl_table=11 /product="NADH dehydrogenase" /protein_id="NP_266984.1" /db_xref="GI:15672810" /db_xref="GeneID:1114455" /translation="MAKKKIVIVGAGFAGVSATRLLAKNLKNDAEITVIDKHDFQTSM TQLHEVAASRVEADAVQYHLNRTIGKFNNVKVVKESLVELDKANKKVITDKNSYDYDY LVVSMGGEPNDFGVPGVNEYGFTLWSLEDALKIKAHLKEMVQAAAKEADSEKRKKLLT FSVAGSGFTGIEMAGELIDWRKKASKKYGIPESEFTINIVEMMPTIMNILDRSLADKA LVYLQNKNINVLVNHGITAVAQDHITVNVGGRDEEKVVKEIPGNTLIWTTGVQGNTEA EACQLSETERGHRLQANEYMEAIGEENHGIYVAGDVSGYIVPENGRPTPQIVEAAEQT GSTAAKNIIADIKGGEKTKFVGNYRGTLVSIGSGYAVGTVGKTKLSGFSATFMKHMVY LVYTFEIRSGHYFFKYINDQLFHKGAI" gene 841314..843317 /gene="noxB" /locus_tag="L41335" /db_xref="GeneID:1114456" CDS 841314..843317 /gene="noxB" /locus_tag="L41335" /note="aerobic energy metabolism" /codon_start=1 /transl_table=11 /product="NADH dehydrogenase" /protein_id="NP_266985.1" /db_xref="GI:15672811" /db_xref="GeneID:1114456" /translation="MTKKQIVVIGGGVAGVHATRELSKKLKADADITLIDKHSYHTTM TQLHEVAAGRVPFTTVQYDFQKLLGKRKNVSLVTDSVVSLDKENKQVITKHGRYSYDY VIVALGGEPNDFGVPGVKEHGFTLWSLEDAMRIKRHLEKIVQYASTEVDDEKRRALLT ISVAGSGFTGIEMAGELIDWRKKVSTDWKIPEEEITINVVEMMPTILNTLDRKQADKA HAYLEKKNVHVLTNHGIVEVAKDHIKVNVGGRDEEKVAKELPTHTLIWTTGVQGNTAA KTDLNETERGHRLQANEYMQAVGFEGKGIYVAGDVSGYIEPDTGRPTPQIVEAAEQTA HTAAANILADINGGSKHKHESKYQGTMVSIGSTWGVAKIGSMRLTGFWAMLMKNIVYF IYTLQIRSAHYFWRYALDEVFRVKDNRNFMRGHTSRQGNVLWAVPLRIFYGVVWFTEA IKKIVGDGQYFNPTTWFGKGSWFTNDLKFPFSWLQEAPKAADAAAGASTAASSSSSVA DAAAGATGAATTAASSGGGEAAHKATEWGLSYAYGSDPMTVFDKVPHWMEPIFKFMIP NREVALFMQKFMSIVEIFLALALIFGLFTWIAAAATAALTVMFSLSGMFYWVNIWFIP VAIALMNGSGRSFGLDKWVQPWIQRWLTKIWYGQSRSIYKGRQ" gene 843431..844102 /gene="sdaB" /locus_tag="L43452" /db_xref="GeneID:1114457" CDS 843431..844102 /gene="sdaB" /locus_tag="L43452" /note="energy metabolism, amino acids and amines; gluconeogenesis; produces pyruvate" /codon_start=1 /transl_table=11 /product="beta-subunit of L-serine dehydratase" /protein_id="NP_266986.1" /db_xref="GI:15672812" /db_xref="GeneID:1114457" /translation="MDNLRYKSVFDIIGPVMIGPSSSHTAGAARIGKIVRSIFGELPE KLEIHLYESFAKTYRGHGTDVALVAGVLGMDTDDERLPMAPQLAFEQGMEISYVPHPE EKAEHPNTARLFAKKGDRTMTVTGISIGGGMIQVTELNGFDIAISAGVPTFVVIHEDV PGMIARVSSVLSEHQINIAQMNVTREAKGEKAIMILEVDTPNVKEVIEEMKLIPRLHA VNFFN" gene 844122..844985 /gene="sdaA" /locus_tag="L44083" /db_xref="GeneID:1114458" CDS 844122..844985 /gene="sdaA" /locus_tag="L44083" /note="energy metabolism, amino acids and amines; gluconeogenesis; produces pyruvate" /codon_start=1 /transl_table=11 /product="alpha-subuni L-serine dehydratase" /protein_id="NP_266987.1" /db_xref="GI:15672813" /db_xref="GeneID:1114458" /translation="MFKNIEELIEDSKNYSSVIELMIAIEMEQTGRNREQIWEMMEHN LETMLDSVKKGLAGKKSLTGLTGGDAKLMDDYIKSGKALSGELILGAARDAVAVNEVN AQMGLICATPTAGSAGCLPGVLTSTIKTLDLSHEQQVEFLFVAGAFGLAIANNATISG AEGGCQAEVGSASAMASAALVLAAGGSAEQAGYAIAIVLQNMLGLICDPVAGLVEIPC VHRNAMGASQAMISADMALAGVKTVIPVDEVVNTMYNVGRSLPAAFRETAEGGLAQTP TGRKIMEELFG" gene 845106..845561 /gene="copR" /locus_tag="L45109" /db_xref="GeneID:1114459" CDS 845106..845561 /gene="copR" /locus_tag="L45109" /note="general regulatory function" /codon_start=1 /transl_table=11 /product="transcription regulator" /protein_id="NP_266988.1" /db_xref="GI:15672814" /db_xref="GeneID:1114459" /translation="MNEVEFNVSNAELIVMRVIWSLGEARVDEIYAQIPQELEWSLAT VKTLLGRLVKKEMLSTEKEGRKFVYRPLMEECTAINLMADGLIQKVCETKHVNVLQEM IEKSTLTAKDIELLQESLNAKEVVGQKHCNCLETSGLCACKHEHEQISA" gene 845577..845777 /gene="yieF" /locus_tag="L45583" /db_xref="GeneID:1114460" CDS 845577..845777 /gene="yieF" /locus_tag="L45583" /note="transport and binding protein, cations; similar to N-part of many mercuric reductases; probably involved in cation transport, because of the visinity of corresponding genes" /codon_start=1 /transl_table=11 /product="mercuric reductase" /protein_id="NP_266989.1" /db_xref="GI:15672815" /db_xref="GeneID:1114460" /translation="MKETLKIEGMTCDHCVMHVTNALEAIDGVEKAKVSLKKNEALVK FSAPADMDKMAVAVAEAGYKVI" gene 845963..848125 /gene="copA" /locus_tag="L45966" /db_xref="GeneID:1114461" CDS 845963..848125 /gene="copA" /locus_tag="L45966" /note="transort and binding protein, cations" /codon_start=1 /transl_table=11 /product="copper/potassium-transporting ATPase" /protein_id="NP_266990.1" /db_xref="GI:15672816" /db_xref="GeneID:1114461" /translation="MRSQSFVITGMTCANCVNTVSKTLNQSDKIMEATVNLATEKAKI VADDNISDQEIINLVEKAGYGAIVNDKAHQEKIARQAAKKARNLALSFWIALILTLPL VVAMFADIFGVHANWVMFLHEPIVQLILATPVQFVIGWRFYVGAYHALRNKSANMDVL VALGTSVAYFSSLILAVFMSQANALNFESSMVIITLVVMGKLLEHNAKEKTTQAITGL MSSRANFVHTESTDLAIEEVQMGQVIRILPGEKVPLDAMILSGKASFDESILTGEALP VVKMDDEVIFEGTINLDGEVKAVVVHDLNDSTISRMVKMMSEAQGSKPNIQKLADKIS GIFVPVVLVIALITFIATWAVSGILLTAIMHSVAVLVIACPCALGLATPTAIISGTGL AAKNGLLIKNANALELAGLVKTVFFDKTGTITTGEFELTDFKLLTESEKVTDSFNSIE EKLASDKFKLLASLEAHSNHPLAKSLKFQGDLYELTDLSELAGRGLSAKINGQEYFAG NDKLMTDLNLSVPETDDTVIYLANKEKLLAMAVFSSSLKDDALKTIQTLQKRGLKTVM LTGDNQNSAEKIQKLVHLDEVKSGLRPEEKAEIVQNSPNSMMVGDGINDAIALASATV GLAMATGSDIAMEAGDVTVTSGQLHKISTFFEVAKKTISKIKQNYFWAFVYNVIGIPL AAFGLLNPMLAAAAMSLSSVSVILNSLLLTKTKIKNVE" gene complement(848313..850964) /gene="yieH" /locus_tag="L48341" /db_xref="GeneID:1114462" CDS complement(848313..850964) /gene="yieH" /locus_tag="L48341" /note="identified also as transmembrane protein Tmp5. similar to YfhO of Bacillus subtilis" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266991.1" /db_xref="GI:15672817" /db_xref="GeneID:1114462" /translation="MKFIKKNKWALLASFFIPLLLMVIVLAMTGIYWGSSRSILAGDA YHQYVAIHSLYRNILHSGGSSGFLYTFTSGLGLNLYAFSAYYMGSFLMPLTFFFDVKS MPDALYLLTILKFGLIGLSAFVSFKNMYQKLSKLIVLSISTAFALMSFLTSQLEITMW LDVFILLPLIIWGLHRLMDERKRWLYFVSLLILFIQNYYFGFMVAIFLVLYFLARMTY EKWSWTKVLDFVVSSALAGLSSLIMLLPMYLDLKSHNSDALSTLSGVFTENSHLFDLF AKNFVGTYDTTQFNAIPMIYVGMMPLALAILFFFTKSIRLRSKFAFLGIIAFFVASFY LQALDLLWQGMHSPNMFLHRYAFLFSLLLVLMALETLSRWEEIKTWHILTISLFLITG FLATLIFGHYKYVMTSQVMLTFLFGLAYLILSINSVRKWISAHLFVIILFVFMTVEAG VNALYQVQGIQKEWNFASRDYYNTQVNSIEPIANKVNELTGSGFARMDNTVPDTANDG MKYNFNALSQFSSVRNSNASSIMRQLGFHTDSTYLNLRYPGNTLLMDSIFGIKYNISQ AQPPKFGFSPVSNALSNLSKNSNAMGLGVFVPNGFEDAKFTDKAQASSFINNQTALVN ALTKSKTTFFTPFYTTSEETADKITGAGNSVTLTRPKTSTATDVSVTYGITVAANSQI YLSVPNITYLNSNAENTLITISDVSNPKMTRSLNSYYVGTNDTGSFLNLGSFSKETKL KVTLAFPENSQVTFDTTSFWRLDTEAYQKEMALLQSRSPKTEMIKNGVRMTYREKEKG DIFLTIPYDKGWSAKVDGKKVAVSKAQSGFMKVSVPAGSHRLELKFFPNGLKEGIICF ILGILLFIGYNYFTNKPKKSGGTKNES" gene complement(851035..851820) /gene="yifA" /locus_tag="L51063" /db_xref="GeneID:1114463" CDS complement(851035..851820) /gene="yifA" /locus_tag="L51063" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_266992.1" /db_xref="GI:15672818" /db_xref="GeneID:1114463" /translation="MIKHSENPLVFNTAIGTKKRNETVVPKEVLCPFCDVENLTGILK TSDHKIWLKNKFPTLKNSMMTVIIESDEHLGDISTYGVEENREVFSFAFECWDEMIQS GKYQSVLMFKNFGPRSGGTLRHPHLQVVGLEETDGYAQIAKENFEGVEIKKNGLTVTL STRPIMGFVEFNVIISELENVEKLADNVHGITSYLMTDYMNGRCDSYNLFFHHFDDKY ICKIVPRFITSPYFIGYKIPQVNGIEALEEIADEIRNRLDKKY" gene 852072..853226 /gene="mnmA" /locus_tag="L52034" /db_xref="GeneID:1114464" CDS 852072..853226 /gene="mnmA" /locus_tag="L52034" /EC_number="2.1.1.61" /note="catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs" /codon_start=1 /transl_table=11 /product="tRNA-specific 2-thiouridylase MnmA" /protein_id="NP_266993.1" /db_xref="GI:15672819" /db_xref="GeneID:1114464" /translation="MDNTNTQLMSGKSPAQTRVVVGMSGGVDSSVTALLLKEQGYDVI GVFMKNWDDTDENGVCTATEDYKDVAAVADQIGVPYYSVNFEKEYWDRVFEYFLAEYR AGRTPNPDVMCNKEIKFKAFLDYAMELGADYVATGHYAQVRTDENGIVHMLRGADNNK DQTYFLSQLTQEQLKKTMFPLGHLEKPEVRKIAEKAGLATAKKKDSTGICFIGEKNFK KFLGEYLPAQPGKMMTLDGIEMGNHAGLMYYTIGQRGGLGIGGQHGQLTSDPWFVVGK DLTTNTLYVGQGFHHEHLYSTSLDASDLSFTREMPETFDLHCTAKFRYRQEDTGVTIH VNGDKVTVDFDEPVRAITPGQAVVFYDGEECLGGAMIDVAYKAQKVMQYQ" gene 853437..854663 /gene="rpsA" /locus_tag="L0378" /db_xref="GeneID:1114465" CDS 853437..854663 /gene="rpsA" /locus_tag="L0378" /note="in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S1" /protein_id="NP_266994.1" /db_xref="GI:15672820" /db_xref="GeneID:1114465" /translation="MNEFETLLNSVEDVKVRDVVKGEILSVENGQATVAIVGTGVEGV LTLREITNDKDADINTFVKPGDVLDLLVIKQIVGKEAEGANVYLLSLKRLEARKAWTQ LEGKEGEIVTVKVTKDVKGGLSVDYNGVRGFIPASMIDTYFVKDTKKFVGEEIEAKII EVNASENRFILSRRAVVEAEAIEMRKEAFAQLQEGDIVEGTVSRVTNFGAFVDLGGID GLVHVSELSHSRIKRPSDAVKPGDVVNVKILKLDPEAGRLSLSLKATQPGPWEQVEEK APVGSTVEGTVKRLTDFGAFVELYPGVEGLVHVSQISWERVENPKDVLKVGQVVNVKV LDVKPAEERISLSIKALEEAPARPARNNDNDGEKRDRKPRAPRKAAKPSYDLPETQEG FSLADFLGEDFDINDL" gene 854814..855530 /gene="udp" /locus_tag="L54803" /db_xref="GeneID:1114466" CDS 854814..855530 /gene="udp" /locus_tag="L54803" /note="salvage of nucleosides and nucleotides" /codon_start=1 /transl_table=11 /product="uridine phosphorylase" /protein_id="NP_266995.1" /db_xref="GI:15672821" /db_xref="GeneID:1114466" /translation="MEEGQAHIQLKKTDARLDAIIVGDPARIDQVAKFLTDVKNLKYN REFRSICGTYKGKELLVLSTGVGAPSAAIAIEELHNIGVKRIIRVGSAGALQLGIDLG SPIIGEGAVRDDGLTKMYVPEQYPAVPSTDLLNKAKEIAPDGFYGIIRSHDGFYMDNH EETQAYWSKFGIVGEDMESGALFTVGRLRGIETLSILNNVVAYGGDLQAGVNDLVSGN DKVNKGELRTIEIALEILNR" gene 855659..856372 /gene="pnuC1" /locus_tag="L200029" /note="transport and binding protein; nucleosides, purines and pyrimidines; may contain a frameshift mutation" /db_xref="GeneID:1114467" gene 856467..858473 /gene="uvrC" /locus_tag="L0258" /db_xref="GeneID:1114468" CDS 856467..858473 /gene="uvrC" /locus_tag="L0258" /note="The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision" /codon_start=1 /transl_table=11 /product="excinuclease ABC subunit C" /protein_id="NP_266996.1" /db_xref="GI:15672822" /db_xref="GeneID:1114468" /translation="MNQTIKAKLELLPDSPGCYLHKDKNGTVIYVGKAKNLKNRVRSY FHGSHNTKTELLVSEIEDLEWIVVGSNIESLVLEINLIQRYKPKYNIMLKDDKYYPFL KITNEKYPRLLVVRKVQKDGATYFGPYPDVKAANEVKRLLDRIFPFRKCGLHEKKVCF YFHIHQCLCPVVNHVDPQVFKDMTQEVKEFLTGSDKKIVNELEAKMMVSSDNMEFEQA AEYRDVIKAIGTLRTKQRVMNQDLKDRDVFGYYVDKGWMCVQVFFVRQGKLIQRDVNM FPYYNDAEEDFLTYIGQFYQDNNHMMPREIFIPQDIDKESVEAVVAASQEGNLLTKAQ AKEVDAKVFTAKTLKFSDQKDVEQSIVKLDKELSAEKRLSSLLAKTQIVQPSRGEKKQ LVNMATKNAQSQLQLKFDVAERDILKTTKAVENLGKILGIPKPVRIESFDNSNIMGTS PVSAMVVFIDGKPSKKDYRKYKIKTVVGADDYASMREVMTRRYSRALKEETALPDLIA MDGGAGQVNITKQVLKELGLSIPVAGMQKNDKHQTSELLFGDPLDVVPLSRQSQEFFL LTRIQDEVHRFAITFHRQLRGKNTFSSKLDGIVGLGPKRKQKLLTTFKNLKAIEEASV QEVAEADIPYEVAERVKTTLSGPIQENENWESLKDNVPLLEGKK" gene 858637..859800 /gene="mutY" /locus_tag="L0296" /db_xref="GeneID:1114469" CDS 858637..859800 /gene="mutY" /locus_tag="L0296" /EC_number="3.2.2.1" /codon_start=1 /transl_table=11 /product="A/G-specific adenine glycosylase" /protein_id="NP_266997.1" /db_xref="GI:15672823" /db_xref="GeneID:1114469" /translation="MDWSKNQIKEFQQDLLSWYDDNKKPLPWRKTTEPYKIWISEIMS QQTQVETVMPYYERFMKKYPTIETLAQADDAELLKLWEGLGYYSRARNLKIAAQEVVD KYNGKFPDNLADILSLKGIGPYTAAAIASISFGLAEPAIDGNLMRVTSRLFELDCDIS KSSSRKIFDGYLRKLISKKRPGDFNQALMDLGSLVCSPKSPKCEACPLLNYCAAAASG KQLNYPVKTKKIKQKDLYFTAFALENSLGEYYLEKRPSKGLLADMWTFPLTELPAADF EKMITDGSVSKNIVIPELPESISKMEYIANFTHIFSHQKWNLAIIKLKPEETFEVADE LLSEDKMWVHFDSKVLTENGQPKVSRSQIPLAGPQVKMFEILDKKNKKIDLLK" gene 859866..861284 /gene="pepV" /locus_tag="L59867" /db_xref="GeneID:1114470" CDS 859866..861284 /gene="pepV" /locus_tag="L59867" /experiment="experimental evidence, no additional details recorded" /note="divalent metal ion-dependent extracellular dipeptidase; able to hydrolyze a broad range of dipeptides but no tri-, tetra-, or larger oligopeptides; differences in the amino acid specificity of the cleavage site varies between species; similar to succinyl-diaminopimelate desuccinylases" /codon_start=1 /transl_table=11 /product="dipeptidase PepV" /protein_id="NP_266998.1" /db_xref="GI:15672824" /db_xref="GeneID:1114470" /translation="MTTIDFKAEVEKRKDALMEDLFSLLRIDSAMDMEHADAENPFGP GPRKALDAFLKIAERDGYTTKNYDNYVGHFEYENGASDDAEVLGIIGHLDVVPAGSGW DSNPFEPEIRNGNLYARGASDDKGPTVACYYALKILKELNLPLSKKIRFIVGTNEETG WADMDYYFEHCELPLPDFGFSPDAEFPIINGEKGNITEYLHFVGKNDGEVVLHSFKAG LAENMVPESATAVISGAKDLQAALEKFVAEHASKNLRFDLEESAGKATITLYGKSAHG AMPEKGVNGATYLTLFLNQFNFADGAAAFIKVGAEKLLEDHEGEKLGTAYVDELMGNT SMNAGVWSFDENSEGKIALNFRFPQGNSPERMQEILAKLDGVVEVELSKHLHVPHYVP MSDPLVSTLIDVYEKHTGLKGYETIIGGGTFGRLLERGVAYGAMFEGEPDSMHQANEM KPVENIYKAAVIYAEAIYELTK" gene 861387..861746 /gene="acpS" /locus_tag="L61355" /db_xref="GeneID:1114471" CDS 861387..861746 /gene="acpS" /locus_tag="L61355" /note="Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids" /codon_start=1 /transl_table=11 /product="4'-phosphopantetheinyl transferase" /protein_id="NP_266999.1" /db_xref="GI:15672825" /db_xref="GeneID:1114471" /translation="MVFGTGVDNVELSRIQKALTRSERFVEQVLTAVELEKYNSFQST ARKTEFLAGRWAAKEAFSKAYGTGFGKALGMHDLEIKNDELGKPFFTKHPFDGQVHLS ISHSNLEAVAFVVLEKN" gene 861791..862894 /gene="alr" /locus_tag="L0103" /db_xref="GeneID:1114472" CDS 861791..862894 /gene="alr" /locus_tag="L0103" /EC_number="5.1.1.1" /note="converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer" /codon_start=1 /transl_table=11 /product="alanine racemase" /protein_id="NP_267000.1" /db_xref="GI:15672826" /db_xref="GeneID:1114472" /translation="MKTSPHRNTSAIVDLKAIRNNIEKFKKHIHPNAEIWPAVKADAY GHGSVEVSKAVSDLVGGFCVSNLDEAIELRNHLVTKPILVLSGIVPEDVDIAAALNIS LTAPSLEWLKLVVQEEAELSDLKIHIGVDSGMGRIGIRDVEEANQMIELADKYAINFE GIFTHFATADMADDTKFKDQQARFNKIMAGLSRKPKFVHSTNTAAALWHKEQVQAIER LGISMYGLNPSGKTLELPFEIEPALSLVSELTHIKKIAAGETVGYGATYETSEETWIG TVPIGYADGWTRQMQGFKVLVNGEFCEIVGRVCMDQMMIKLDKSYPLGTKVTLIGRDK TNEITTTDVADWRGTINYEVLCLLSDRIKRIYK" gene 863010..863438 /gene="yigC" /locus_tag="L862989" /db_xref="GeneID:1114473" CDS 863010..863438 /gene="yigC" /locus_tag="L862989" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_267001.1" /db_xref="GI:15672827" /db_xref="GeneID:1114473" /translation="MIKIYTVASCSSCKKAKEWLEKQNLAYQEINLVTSRICKEDILE ILALTEEGTGDIISRRSQAYQRLNIDFETIKLNDLIQIIEENPTLLRRPLIVDHKRLQ VGYNDDEIRKFLPRKKREIQIKVATEASYNLDIEEQFHEG" gene 863576..864883 /gene="gshR" /locus_tag="L0197" /db_xref="GeneID:1114474" CDS 863576..864883 /gene="gshR" /locus_tag="L0197" /EC_number="1.8.1.7" /note="thioredoxin, glutaredoxin, and glutathione" /codon_start=1 /transl_table=11 /product="glutathione reductase" /protein_id="NP_267002.1" /db_xref="GI:15672828" /db_xref="GeneID:1114474" /translation="MFDYIIIGAGPGGLGLAYRLKTKDNKIGIIENDKWGGTCPNYGC DPTKMMMAVVEAKSRVEQLKGQGISGELNIDWKGLKSRKLNITDPYEKSTFTGLKNAG IETIYGSAAFNDQGKLEVEGKTYQAKTYIIATGSRPRLLDIDGKEFLKTSNDFLALEE FPAQISFLGSGPISLELAQIAKAAGSDVTIISRKKARVAHFDEEMGQEFINYLKAQGI KFIEDISVDKVEKVADGFLLTDGTDFEHKTDLVIAGVGRQPNSDKLNLEKVGVETDAK GIKVNEYLQTSNSKIYAMGDVLSKNQPHLTPVSSFEGAYLGENLVKDEPQKIAYPAIP TIIFGTAKLAEVGHLAGEGIHTKTLDLSSWYTYKRINDPLAKLKVALNEKREIVGAST VSSVADEVINLINILIQQKMTLADVEKMIFTYPTVASDLEYFY" gene 865009..865926 /gene="choQ" /locus_tag="L64737" /db_xref="GeneID:1114475" CDS 865009..865926 /gene="choQ" /locus_tag="L64737" /note="transport and binding protein; amino acids, peptides and amines; maybe involved in osmoprotection; substrate can be also proline or glycine" /codon_start=1 /transl_table=11 /product="choline ABC transporter ATP binding protein" /protein_id="NP_267003.1" /db_xref="GI:15672829" /db_xref="GeneID:1114475" /translation="MIEFQNVSKAFANKKILDHANFTIKDQEFFVLVGPSGSGKTTTL KMINQLVTHSEGKILINNEEISTANLRKLRLSVGYVLQQIALFPNLTVSENIALIPEM KGWDKAKIADRTNELLDLVGLNPKDYAQRQPSELSGGEQQRVGILRAIAANPKIVLMD EPFSALDPISRRQLQIFIKDLQKKMNLTVVFVTHDLDEALYLADRVAVMNDGLIQQIA EPADIYQHPANDFVKTFFKEYRQNLSTVSVENLLLTELSVNPEAQEVADNTAISEIIN RLSDKEVLKYKGKSISSDDIICYIAGGDK" gene 865923..867425 /gene="choS" /locus_tag="L65675" /db_xref="GeneID:1114476" CDS 865923..867425 /gene="choS" /locus_tag="L65675" /note="transport and binding protein; amino acids, peptides and amines; maybe involved in osmoprotection; substrate can be also proline or glycine; permease and substrate binding functions are in the same protein" /codon_start=1 /transl_table=11 /product="choline ABC transporter permease and substrate binding protein" /protein_id="NP_267004.1" /db_xref="GI:15672830" /db_xref="GeneID:1114476" /translation="MNQLISTFQSQQGQFWQALLEHIQISLISIFIAILISIPLALLL RRLPKIAEPVLQVTGIFQTIPSLALLGLLIPFIGIGSLPAIVALVVYAIFPIVQNTYT GLEQIEPSLIEAATAFGMNRRERLMKFELSLAMHFIMAGIRTSTVMVIGTATLAALIG AGGLGNFILLGINMNDVSLILIGAISSALLAIIFSSLLKFLEKAKIKTILISFFIGLL VLGGSYYRPQTSNHPQITIAGKLGAEPDVLINMYKLMIEKDSNIRVNLKSNFGDTTFL YNALKAGKIDLYPEFTGTITSTFLKDPVSSTDPNVVWQKAEEGIKKLNQFTYLSPMKF QDTYAIAVKSDFAKEHQLTKISDLANVSGLTAGFDVEFANRSDGNIGLRKLYGLDLNV KTMQNSLIYKALNSGAVNVAEVYSTDSQIKQYNLTVLKDDKNLFPPYQAAPLMKESLL KKYPELKKILNKLSGKITDQEMIEMNYDVNVKQEDAAKVAERYLKSKGLI" gene 867714..869597 /locus_tag="L200030" /db_xref="GeneID:1114477" CDS 867714..869597 /locus_tag="L200030" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_835303.1" /db_xref="GI:30024010" /db_xref="GeneID:1114477" /translation="MKSSSKFWLLSTGILLSLLVTSHPLAVKADENSAVTPPSQTEAV TNPTVNSSLAASDSTTEGNTESSQAETQTKEANSLTSQASTTLSASSVSSSSTSSAQA SSVEISYNSLETASSTSSGSEINASTSKAPGVPLDSSKANVTIGSSLSASGTIISPAL TNGSIASQANGQDPVISSISATGSVANDITGPATLDGINITIKANNLVPNNFLTPDGL LWSANTEVIPITGQTTGQISTENFGQTDGPTIPATTYTMNAGDSGRITNVGRTLAGTN LDLIYKVISTDESSWQAPAESTSDCPIGLAFTGEQNIANSDGNSIVALYYGANNVNLN YQIVAHNTNFKIPVLASFITTDIDMAQGVKTNLANLLTVIPKTTNLATDSSGVIYDTT IPDTDLNGQASLPYGGYLGVGFLSKFDYDFYSPAPARSENSYQYSQGVRYDLFGSALQ AHLTTQVRDIVYLNYYDANENNQLIVPQHQFIWFPNVSWNVPASEFPHYAYGQESQHR NGNTIIVGDYYHIKSTVTYDYYGMDGTYLGQQSTTGLYNKPYSVNVPYRFGNYYIEGS TTRSGLYPKTDETLNVYYKYIPPIVYYNTSNPYATTYYANGYEYVPNYIAPVVYYAPT YGY" gene 870129..870722 /gene="yihA" /locus_tag="L69878" /db_xref="GeneID:1114478" CDS 870129..870722 /gene="yihA" /locus_tag="L69878" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_267005.1" /db_xref="GI:15672831" /db_xref="GeneID:1114478" /translation="MYSDKVIVDIGGNADDRYGYSYRSKELFIKSNKKMTGMSIIPVL IISGAFPASAMNFVENHSLEISPVEWLVLTTVACLLLSFVVAIILLFLSENFFNYRNF EKLEDSKKVEKLYQMQDSKTGEIILIVFAMICGSVGITLAGLYIDSGDVGIWLIYITD LILVNLLVYIYWIYIRRARKFRTLALMELKKEQEIEK" gene 870719..871171 /gene="yihB" /locus_tag="L70471" /db_xref="GeneID:1114479" CDS 870719..871171 /gene="yihB" /locus_tag="L70471" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_267006.1" /db_xref="GI:15672832" /db_xref="GeneID:1114479" /translation="MKEEIDENKEKEVIQKAYKYNGLLGIWIIAVFISFLLQVAKIIT DSYLVWGFGLLILIYAIALHVQNHKLRIKSIASILVYSLNVLSVIGAVLIILANQAHN LLELEIGLLVGFVTVILQVLALVSALLATRKLRKLYPDVVGNRRKNIK" gene complement(871221..873308) /gene="copB" /locus_tag="L70979" /db_xref="GeneID:1114480" CDS complement(871221..873308) /gene="copB" /locus_tag="L70979" /note="transort and binding protein, cations" /codon_start=1 /transl_table=11 /product="copper-potassium transporting ATPase B" /protein_id="NP_267007.1" /db_xref="GI:15672833" /db_xref="GeneID:1114480" /translation="MSNKTHSSNHDEMMSEHHHNHEIMDMEHENHEMHNMHNMDNMHD MDNMDMMNHGGHMMHMGDMSKKLKVAIILMIPLLLISPIAGFTILKFPGSEILQLILG TIIFFYSGTPFFSGAKGELKSRKPAMMMLITMGITVAYAYSVYATIMSLNGHMGMNFW FELATLIVIMLIGHLIEMKAIMGAGDALKDLASLVPKKAHLKSGKDVELSELKVGDLL LVKENEKIPADGLILSEALVDESMITGESRAVNKKTNDLVYGGSLNQNQPFEMKVTTL GKDSFLNQVAELVKKAQAQKSNLENMADRVAGYLFYAALIVGIFSLIFWTISSNFSFA LLLAVSVFVIACPHALGLAVPLVVSRLTSISAKNGLLIQNRTSLEKINTIKYALMDKT GTLTDGKFIVRNVIDFTDETDILQIMAALEGSSTHPIAQSIVAAAKPLGNLKVEAVEN IPGVGIKGQVNQNFYQIVNYKYLRENQLSYDEQKIAQYLDLGLTVSFLINEQQDVLGF IALGDSPKADAKAFINGLLAQGITPVMLTGDNKETAKKIASALNIPEFRAELKPEDKA EIVKEYQKKAGVLFIGDGVNDSPALATATIGFAIGAGTSVAISTADVVLVNSNPSDVL DMINISKRMLRKMKQNLWFGAGYNIIAIPVAAGILYPFTGIYIDPLIAAVLMSISTVI VSINAMGLRYDKK" gene 873509..876700 /gene="yihD" /locus_tag="L73264" /db_xref="GeneID:1114481" CDS 873509..876700 /gene="yihD" /locus_tag="L73264" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_267008.1" /db_xref="GI:15672834" /db_xref="GeneID:1114481" /translation="MKKIRPEVTTVTSKSHFRTWKSGKSWLFATSALAIIIVSGTITD QNVKADTAIDSSQQISGITEVTSYSALASSTNSDVAASQNQVAYEQASDQSSNKSLAN TVETDTEGITSNVSDSSNSINESQNTTSTVVIQTPTNNIVSLADSSSSNDNGSNSILS SSNAADSVDSAVGSQSSTSSSGVLSESSAIDSGIASVSQSSEMNLVGNSSASASSAAV ASFTAILATNPSMVPMLTQALAAAAPATTSGSAILNTTLGDLVNQAISTVGISGLANI FSTLGTFNIPGMTTAAAALNGVEQIVNIVGNIQEAAANPGAFLLNEIKSAGLDVSQIP LVGGQIAAAFNAIPSMSPAAMLTFLENPTIPGLSSIPGASLVLSPVLSAISTVTSGIV NQLNTTTSNALGGVNFDLDTLVSLQGNDLVNYLAGLVVNSAINRVGQIAWSQLSPTIS NIPLVGTTVNNVLSPTLNNLTGASLGEVANLTGVSSLLDQVNNSLGNLISLGSTALAT IENTLQNSLNSFGNLPAGASDILNQVLNQLQNAINNIVESATGIVNNLPGLGAIENGL SNTISQIPNNINNFVNNALNGITTIINSLTPSVGASTVNPNSSANSSQSSSSASSSSS AASSSTSSSNVSSNTSSNSSEANTSSSTSNASSSSSSSEGSSASSSNSSESSVASSSS VDSSQSSSAGVNSSSSSAEGSSASSSNSSESSVASSSSVDSSQSSSAGVNGSSSSSES SSASSSNSSEGSVASSSSVDSSQSSSAGVNSSSSSAEGSSASSSNSSESSIASSSSVG SSQSSSTGVSSSSSSAEGSSASSSNSSESSVASSSSVDSSQSSSAGVNSSSSSSEGSS ASSSNFSESSIGSSSSVDSSQSSSSTEGSSASSLSSSESSMTSSGGTSDSNSNTGQTS TTSSSSKNSSHSSLSSNESSSASLTSSESSGSTTSSSMLTNPNLQSNDKNGSSLTSNS SYTSEVKLNNLSHSNLSSNEAKVSTLISKVSSSPSLSSSLSAMSLQLVPTVTKEELPK TGADDDLSLVLAELRLGLVATLTIGKVKYKKRF" gene 876830..877714 /gene="folD" /locus_tag="L76582" /db_xref="GeneID:1114482" CDS 876830..877714 /gene="folD" /locus_tag="L76582" /EC_number="1.5.1.5" /EC_number="3.5.4.9" /note="folic acid; tetrahydrofolate dehydrogenase" /codon_start=1 /transl_table=11 /product="cyclohydrolase" /protein_id="NP_267009.1" /db_xref="GI:15672835" /db_xref="GeneID:1114482" /translation="MNVSLWYNSSMNLIDGKALAAKMQAELKVKVDKLKEADNVPGLA VILVGEDPASQIYVRNKARQATAIGLNSSVVRLPETVSEQELLDLIEQYNQSEQWHGI LVQLPLPEHISEEKVLLAIDPEKDVDGFHPMNMGRLWSGNPLMIPSTPAGIMEMFREY DVELSGKRAVVIGRSNIVGKPMAQLLMMADATVTIAHSKTENLRELTKEADVLVVAIG RDRMIKAEDVKEGAVVIDVGMNRDEDGKLHGDVDFDEVKDVASLITPVPGGVGPMTIT MLMEQTVRAASRKMNENK" gene 877881..879134 /gene="xseA" /locus_tag="L0254" /db_xref="GeneID:1114483" CDS 877881..879134 /gene="xseA" /locus_tag="L0254" /EC_number="3.1.11.6" /function="bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides which are then degraded further into small acid-soluble oligonucleotides" /note="bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides" /codon_start=1 /transl_table=11 /product="exodeoxyribonuclease VII large subunit" /protein_id="NP_267010.1" /db_xref="GI:15672836" /db_xref="GeneID:1114483" /translation="MTEYLSVSTLTKYLKAKFDRDRYLERVYLTGEISNFRRRPNHQY FALKDEGAVIQATMWAGQFRKLDFELEEGMKVLAVGRISIYPPSGSYSINIESLVPDG VGALAVKFEQLKKKLTAEGLFEQRWKQTLPQFSKKIAVVTSPSGAVIRDIITTVQRRF PMSQIVLYPTKVQGQGSAEEIAGNIRRANQRGDFDVMIIGRGGGSIEDLWGFNEEIVV RAIFESRIPIISSVGHETDVTLADFVADSRAATPTAAAELATPNTKVDLINWANEQEK RLFNRLTHVIKIRRERVDKLSQSVVFRQPERLYDGHLQKLDRLCERLSVLTENKVANM KHRYELSAGKLIPTYGKIVEAKKNKTEQLYQSLLLLDISKIKARGFSLVTDEKGKIIK SVSDVKKGQTLDVELTDGKVIVEVK" gene 879134..879373 /gene="xseB" /locus_tag="L0255" /db_xref="GeneID:1114484" CDS 879134..879373 /gene="xseB" /locus_tag="L0255" /EC_number="3.1.11.6" /function="bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides which are then degraded further into small acid-soluble oligonucleotides" /note="catalyzes the bidirectional exonucleolytic cleavage of DNA" /codon_start=1 /transl_table=11 /product="exodeoxyribonuclease VII small subunit" /protein_id="NP_267011.1" /db_xref="GI:15672837" /db_xref="GeneID:1114484" /translation="MATKKEDVKFEDNLAELENIVRKLESGDVALEDAIAEFQKGMKI SETLKKTLNEAEETLVKIVGKNDQESDFSPEQKDY" gene 879522..880679 /gene="yihF" /locus_tag="L79277" /db_xref="GeneID:1114485" CDS 879522..880679 /gene="yihF" /locus_tag="L79277" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_267012.1" /db_xref="GI:15672838" /db_xref="GeneID:1114485" /translation="MKKKFVLAPDSFKESLSALEVCQAMEKGIKKVFPKAEIISMPMA DGGEGTTDALIDATGGRRVYKKVQGSFANTNVEAYFGILGNSNTAVIEMAKANGLELV ALEDRNPMITSTYGTGQLIKAAMDEGVDKIIIGIGGSATNDGGSGMARALGAKFLNKD QEEIPLGGGFLKEVRTIDMSDFDPRVEEIEILIATDVTNPLTGNNGASYVFGPQKGAT EEMVKVLDENLKHYAEIVHNDLGKDVKNKPGAGAAGGLGAGLLAFTNAKMQLGIELVA QTIYLEDKIKEADYVFTGEGGMDYQTKFGKAPYGVCKIAKKYKKPCFALAGYIGDGAD VLYDEGMTAIFGVLSQAQSLSDTLADGAKNVERTSENITRVLAMNEQKAHL" gene 880761..881618 /gene="ispA" /locus_tag="L80459" /db_xref="GeneID:1114486" CDS 880761..881618 /gene="ispA" /locus_tag="L80459" /EC_number="2.5.1.10" /note="menaquinone and ubiquinone; side chain synthesis, also isoprenoid, carotenoid biosynthesis; belongs to a family that groups together FFP synthetase, GGPP synthetase and hexaprenyl pyrophosphate synthetase" /codon_start=1 /transl_table=11 /product="farnesyl diphosphate synthase" /protein_id="NP_267013.1" /db_xref="GI:15672839" /db_xref="GeneID:1114486" /translation="MDTKILKLEDFLTEFYESAEFPTGLAESAKYSLLAGGKRIRPLL FLNLLEAFDLELSKAHYHVAAALEMIHTGSLIHDDLPAMDNDDYRRGQLTNHKKFDEA TAILAGDTLFFDPFFILSTADLSAEIIVALTRELAFASGSYGMVAGQILDMAGEGKEL TLAEIEQIHRLKTGRLLTFPFVAAGIVAQKSTDEVEKLRQVGQILGLAFQIRDDILDV TATFAELGKTPGKDILEEKSTYVAHLGLEGAKKSLTGNLSEVKKLLTDLSVTDSSEIF KIIEQLEVK" gene 881773..882504 /gene="yiiB" /locus_tag="L81441" /db_xref="GeneID:1114487" CDS 881773..882504 /gene="yiiB" /locus_tag="L81441" /note="hemolysin-like protein; similar to hemolysin A" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_267014.1" /db_xref="GI:15672840" /db_xref="GeneID:1114487" /translation="MAGLVVDSKSGERYDKPGQKIDDGTELRLKGEKLRYVSRGGLKL EKALKEFHLEINGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERV VVMEQFNFRNAVLADFEQGRPSFTSIDVSFISLDLILPPLYEILEKNGEVAALIKPQF EAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLTFSPIKGGAGNVEFLVHL LKDGKAEIAQQVNIESVLQKESEEL" gene 882501..882947 /gene="ahrC" /locus_tag="L82250" /db_xref="GeneID:1114488" CDS 882501..882947 /gene="ahrC" /locus_tag="L82250" /note="similar to several AhrC proteins from different species" /codon_start=1 /transl_table=11 /product="transcription regulator" /protein_id="NP_267015.1" /db_xref="GI:15672841" /db_xref="GeneID:1114488" /translation="MKREDRLNFIAQFIRENEIKTQEELVNTLLTHGIDVTQATVSRD IKSLALIKVPAESGGYRYDLPKNKEVLQSSLHKALAFDAITGTKIKDNMLWILANPGT TSLVKNYLLEEYSDDIFSIIIDDDSALVIFEMEEDAKNLYNLLTEF" gene 883095..884762 /gene="recN" /locus_tag="L0264" /db_xref="GeneID:1114489" CDS 883095..884762 /gene="recN" /locus_tag="L0264" /note="DNA replication, restriction, modification, recombination, and repair; may be involved in recombinational repair of damaged DNA" /codon_start=1 /transl_table=11 /product="DNA repair protein RecN" /protein_id="NP_267016.1" /db_xref="GI:15672842" /db_xref="GeneID:1114489" /translation="MLQEISIKNFAIIEEIHLSFESGMTILTGETGAGKSIIIDAMSL LLGGRASSDFVRHGANKAEIEGLFFFDKTPELKAVLLELGFEEVDSEIILRREIFANG RSVCRINGQMVNLATLRQVGELLVDIHGQHDSQELMNPKSHLRLLDEFGDEAFDQIKN NYKLKFENFKNLRQQLNLRQKNEQEFAQRIEILQFQAEEIEAAEINLEEDEQLVNRRE KLNNIKNIADSLSSAYLALDDEDNDYSSLNNIRTTMTELDKISNFDNDYQELADKTAE SYYVLEEVANQIQRIMSDLEFNPAELLQIEDRIMTLTTLKKKYGPELSDVMNYLEKVQ LELSELTGSENDSENLENSVKVAQVQLIEASKKLNEARHKIAKEVEKDIKHELSELYM EKADFKVSFEGAKFSANGNEHVEFFIQTNPGEGFKPLAKTASGGELSRLMLAIKSSFS RRENKTAIVFDEVDTGVSGRVAQAIANKIYKIARHGQVLAISHLPQVVAIADRQFYIE KASTDDITTSTVRKLNAEERVNEIAKMLAGEDLTKEALAQAKRLLSK" gene 884881..885111 /gene="yiiD" /locus_tag="L84636" /db_xref="GeneID:1114490" CDS 884881..885111 /gene="yiiD" /locus_tag="L84636" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_267017.1" /db_xref="GI:15672843" /db_xref="GeneID:1114490" /translation="MLKLNCSYTIKNIGVYVKVNKIWVLIILVCLFFSIYGHYNQNYF FLFVGIVGACAGIICMLCEMLIQILRNQKIKK" gene 885488..886054 /gene="yiiE" /locus_tag="L85237" /db_xref="GeneID:1114491" CDS 885488..886054 /gene="yiiE" /locus_tag="L85237" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_267018.1" /db_xref="GI:15672844" /db_xref="GeneID:1114491" /translation="MSKTRLEAFTDAVIAIIMTVLVLELVRPDSDSLQSFIALLPHLG VYFVSFFILAIYWVNHHHLFQSIKRINGKVLWINISFLFVLSLIPIFSNWVSIYPNSF IPELGYVIIFFFGNFIYLLLTRELLKINGHRKTSETTIRKNILSVVLNIVSILLGYFI APVIMLVGSALIFSMWVIPDKNIEKMFK" gene 886152..886673 /gene="yiiF" /locus_tag="L85895" /db_xref="GeneID:1114492" CDS 886152..886673 /gene="yiiF" /locus_tag="L85895" /note="transport and binding protein" /codon_start=1 /transl_table=11 /product="transporter" /protein_id="NP_267019.1" /db_xref="GI:15672845" /db_xref="GeneID:1114492" /translation="MIKAYIKYWKKAGDLKSYSNRSDYWWVFLTNSIIFAILSILNFM VTIPKAGKIMSQSATLSQKEIIQQVTDLYANPTGGALVIVIVTALIGLAILVPNISLT ARRLRDARFPWWIALVFGVAAIYGLVTMFIHQDLLAKMGYFVGFINFIIYILCLFPTK YGIDEEDDSRTYE" gene 886696..887634 /gene="yiiG" /locus_tag="L86448" /db_xref="GeneID:1114493" CDS 886696..887634 /gene="yiiG" /locus_tag="L86448" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_267020.1" /db_xref="GI:15672846" /db_xref="GeneID:1114493" /translation="MVQAYKKFWLGAFTFNKKTSRKDFWSALLTHIIIFVILFKAYHF FNLLDFYQLTTLWQTFASFFQLIFNLYFFGSLLSFIALTVRRLNDADLPWGLIFLNFI LGLGTLVLLILNLFPSSPRALKFKEYEINSSQEFNNLPETKTLSGIFKDYFKNYFEFR GRTTRRNFWWVQLFWGLTVILFLFLIYLFNQFEQIMFGYNFIGSMVLRLFFFLFILGT FFPQLTIHVRRLRDAGLSNLGLSLLLGGTSGILIFYQMFTKTLKITYTTGHYQLVQYL LFLLVMIAVLSLILVEVMATGELKTNKKNSLFEKID" gene 887854..888807 /gene="mraW" /locus_tag="L87561" /db_xref="GeneID:1114494" CDS 887854..888807 /gene="mraW" /locus_tag="L87561" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_267021.1" /db_xref="GI:15672847" /db_xref="GeneID:1114494" /translation="MPKTIAFKHDTVLLHETVDMLEVKPNGIYVDATLGGAGHSEYLL SKLTNGHLYSFDQDETAHENAKVRLSEQLAEDKVTLIKSNFRYLKSALAELGVTKIDG ILYDLGVSSPQFDDSQRGFSYKKEARLDMRMDQNQTLSAYEVVNDYPYEALVRIFFRY GEDKFSKQIARKIEQARKIKPIETTIELADLIKSALPQKELKKKGHPAKRIFQAIRIE VNDELGAAEESIEQAIDLLKVDGRISVITFHSLEDRLTKTIFKEYSTVNVPKGLPMLP KDMEAKLKLINRKPVLASEEELEFNNRAHSAKLRVAQKQRD" gene 888965..889345 /gene="yiiI" /locus_tag="L88699" /db_xref="GeneID:1114495" CDS 888965..889345 /gene="yiiI" /locus_tag="L88699" /note="membrane protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_267022.1" /db_xref="GI:15672848" /db_xref="GeneID:1114495" /translation="MAAQPKEYFDIETAAKKDSYLIDTETLAPEVLASKFKKFSGVEK VFYLTMVVAALVLAVGLLYVKTKTLEVQGNTMDLRSKISQETTRKTEYDQQILDLTSG TKVLDTANKADLKQNPSNVLKATK" gene 889342..891633 /gene="pbpX" /locus_tag="L89079" /db_xref="GeneID:1114496" CDS 889342..891633 /gene="pbpX" /locus_tag="L89079" /note="cell envelope, murein sacculus and peptidoglycan" /codon_start=1 /transl_table=11 /product="penicillin-binding protein" /protein_id="NP_267023.1" /db_xref="GI:15672849" /db_xref="GeneID:1114496" /translation="MIKFLKKLIFFPFRKVSRNARKTNWSTERNRKRVGKSLFFLAIA LFTVFIFRFVWLITVNHVGGTNLTTMAKSNYQSTETVHAKRGTIYDRTGAAIAVDSST YTIYAVIDKTQVDSNGNPLYIDKKDFTKVEDFLNSKLGIDRDLIKKQLNSKLKQVQFG PKGSDISLEKMKEIQKAAENEKIVGLGFTANISRSYPFGNFASQFIGIARPKDENGTQ ALKGDMGLEKAFNNVLSGENGKETYQKDIYGRPIPGTTKVIEPVKNGQDVYTTLDAQL QRNLEGYMDKAATDTGAQQLSGTLVDAHTGEILATSQRPTYTATTINDAEKQKYFTWN SLLSQSAFEPGSTFKTFLMAGALDSGKVNLNETYQRKLQVYDTTINDWDVTENKSYTL PETVTYAQGFALSSNIGMSKIEMNMGDALWGSYLNKFKFGLKVRAGLDGENPGALPSS NAVSQIQSSFGQGVAVTPLQLIRGWTAIAGNGTMLEPHIVSKVVDPNTKTSLTSKAEV VGHPVSNDAASGVRDLMLTVNTDPVYGTSYSTSGDSEQNLAAGPLFMVNGEPAAVKTG TAQIASTTGGYMTGSQDYLYSAVVMYPAKNPDFIFYMNVKIPTESWTLKYIARVANPL LTSAEAMKNDLSVSADTDTKAGKVTIENYKGKDSGDTADSLRRTVLSPVIIGTGAKVT AQSIAEGEKVSANSRILLLTNDKDQVMPDMYDWSKKEVEQLANWFGIKVTYEGSGNKV LTQSIETSTNVKKGQTLTVKMGN" gene 891698..892687 /gene="mraY" /locus_tag="L91444" /db_xref="GeneID:1114497" CDS 891698..892687 /gene="mraY" /locus_tag="L91444" /EC_number="2.7.8.13" /function="peptidoglycan biosynthesis" /note="First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan" /codon_start=1 /transl_table=11 /product="phospho-N-acetylmuramoyl-pentapeptide- transferase" /protein_id="NP_267024.1" /db_xref="GI:15672850" /db_xref="GeneID:1114497" /translation="MLLNGIVAAVITMIITIIGIPRFIMFFHKKKLGGQPTLEDVKQH ASKAGTPTMGGFVFVVVSLVVSLIAALVFGKFSPAFITAWWVFAMYAVIGFLDDFLKV FKQINEGLTAKQKMLAQILIGIVSYFIYSHGEKSHIIHLLSWEFNIGIFFSIFIIIWL VGWSNAVNLTDGIDGLASITVAISLTAYAVIAVAHQQYDVLLIILSVIGGLLGFFVFN HKPAKIFMGDVGSLALGGFLAIVSILLHAEWTLLLIGAVYVIETLSVMLQVAYFKKTG GKRIFRMTPIHHHFELGGFSGKAAGWSEWKIDIVFWLFTAVLSVIALCIYFAF" gene 892887..893165 /gene="yijB" /locus_tag="L92573" /db_xref="GeneID:1114498" CDS 892887..893165 /gene="yijB" /locus_tag="L92573" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_267025.1" /db_xref="GI:15672851" /db_xref="GeneID:1114498" /translation="MKKVLKLLKGKEIIFVSLLTLIVGGVGGFFIGKGQSNQSQQNNF QEQMQNRFGQNGRSPDTNSGATTGGSNSQSGNSGTTQESSDESGTASA" gene 893298..894818 /gene="yijC" /locus_tag="L92987" /db_xref="GeneID:1114499" CDS 893298..894818 /gene="yijC" /locus_tag="L92987" /note="transport and binding protein" /codon_start=1 /transl_table=11 /product="ABC transporter permease protein" /protein_id="NP_267026.1" /db_xref="GI:15672852" /db_xref="GeneID:1114499" /translation="MDFIRRAWLFTKAKIGRTILLIVAFSAILIFVLSGLIINSAANV SIDNAKKSAGATVSLSVNMQNVIKEAQNSATSSSSSSSSSDTAEAGKRFNIDLPTISE TTAEKIAKLDGVKSASFTYQAQASASSGIEKVSTSSSSSSSSTDTQAAGGFGVREGGM GRGSQEDFTISGTNDLAASTSFTDSYKISSGRAIKASDEGTNNVVIESTLASQNSLKV GSTFTIKDSNDKTYKMTVVGIYTTTSSSTESSIQYMNTMYTALSVANSIKGTTGKVSN ATYSMENPAQADTFVKAANKLVNDSNFQVSKNDQAYQNVKSSLNNVASFARNIVLIVA IAGAIILELIVMLMVRERRFEIGVLMSLGESKLKIIGQFFFELFMVMIVSVGIASAAG NVVGNVVGQQLLKQETTQTTASTSNMQGAPGANGGKTEGQRPSENAGGFMGRAGGAIG FGQSASEAKALEKLNIKTSVSEILLLVAIAILITLIAVGLASIGILRLNPKQVLTN" gene 894907..895044 /locus_tag="L200031" /db_xref="GeneID:1114500" CDS 894907..895044 /locus_tag="L200031" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_835304.1" /db_xref="GI:30024011" /db_xref="GeneID:1114500" /translation="MRGAKMTLKVENLTYYYSNPDDYLFKDVTESFEKGTMYAILGQS G" gene 895101..895583 /gene="yijD" /locus_tag="L94760" /db_xref="GeneID:1114501" CDS 895101..895583 /gene="yijD" /locus_tag="L94760" /note="transport and binding protein; probably a frameshift mutation in this gene" /codon_start=1 /transl_table=11 /product="ABC transporter ATP binding protein" /protein_id="NP_267027.1" /db_xref="GI:15672853" /db_xref="GeneID:1114501" /translation="MSFDDKAIKSSNLTNYRKKTVSTVFQAYNLLTYMSAYDNVKTAV KISSVKFENEKAAIEEAFNKVGLSTDLIYKPVSKLSGGQQQRVAIARALVLNHEIIIA DEPTGNLDEETTAQIVELFKEIAHKDNKIVILVTHENEVAKASDVVFTLKHRKFEKTA" gene 895741..896616 /gene="mleR" /locus_tag="L0148" /db_xref="GeneID:1114502" CDS 895741..896616 /gene="mleR" /locus_tag="L0148" /experiment="experimental evidence, no additional details recorded" /note="evidence experimental PMID:2498286; LysR-family regulators" /codon_start=1 /transl_table=11 /product="malolactic fermentation system transcription activator" /protein_id="NP_267028.1" /db_xref="GI:15672854" /db_xref="GeneID:1114502" /translation="MSLNLRDLEYFYQLSKLRSFTNVAKHFRVSQPTISYAIKRLETY YDCDLFYKDSSHQVVDLTPEGELLAMRTNEILSELNHTKKAIHRSSMKDFKVGFPPII SSYLLSKQDNLNFFNALHMIYGGSNELLSLLLNEEIDSSLLGSLEKIKHPQLEIEELF QKEFFIIMSDSHPLANEKELGFKDLLNEDFILLGEHNIHFNAFNRLNEKYNQSANVVL KLDDAHTIKELVRKNLGISLMADIRLSEDFKNLVKVPFIEEDKQFFHINYAYQKNSIL SESEKNFLEILKTLK" gene 896856..897530 /gene="yijE" /locus_tag="L96605" /db_xref="GeneID:1114503" CDS 896856..897530 /gene="yijE" /locus_tag="L96605" /note="similar to YwaC of Bacillus subtilis" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_267029.1" /db_xref="GI:15672855" /db_xref="GeneID:1114503" /translation="MEKDYLKTRFEPEEFEKLKKKLVRYECALDVVRTQLSNLNTYYN NFEAINPIEHIKHRLKSPESIAGKLKKKDLPVTADAADEHLSDIAGIRIICSYAKNIY EIVEIIKSQEAFTVVSEKDYLRNVKKTGYRSYHMIVEVNLGHLFSEQTCRVEIQLRTS AMDFWATLEHKVRYKYDGQIPEQLSGELQNCAEQIHALDERMYLIHKVVDMINQSEVD IEQIGY" gene 897638..898015 /gene="rplS" /locus_tag="L0415" /db_xref="GeneID:1114504" CDS 897638..898015 /gene="rplS" /locus_tag="L0415" /note="this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L19" /protein_id="NP_267030.1" /db_xref="GI:15672856" /db_xref="GeneID:1114504" /translation="MLLNDGQEEKKMNLIESINAAQLRTDIPDFRPGDTVRVHAKVVE GTRERIQMFEGVVIARKNSGINETYTVRKISNGVGVERIFPVHTPRVEQIEVIRHGKV RRAKLYYLRALTGKKARIAERRR" gene 898311..898820 /gene="yijF" /locus_tag="L98046" /db_xref="GeneID:1114505" CDS 898311..898820 /gene="yijF" /locus_tag="L98046" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_267031.1" /db_xref="GI:15672857" /db_xref="GeneID:1114505" /translation="MKKNISREEAKKSLVYDPYFEKGHYGSKIFQTIIALLGWCGVII PFLWIIFPFVFPNRARFDHIIIYREEKSTLLFLFIFLSISFIFLSILYIILTFLNNYR FKHFLQKEKQYDAERVDVRRKLINQAYDERFGTKDFRHNVCFYSVKEEQNLETDFVKK LYQKGENND" gene 898813..900141 /gene="yijG" /locus_tag="L98542" /db_xref="GeneID:1114506" CDS 898813..900141 /gene="yijG" /locus_tag="L98542" /note="surface polysaccharides, lipopolysaccharides and antigens; similar to intercellular adhesion locus protein IcaA of Staphylococcus epidermidis" /codon_start=1 /transl_table=11 /product="glycosyl transferase" /protein_id="NP_267032.1" /db_xref="GI:15672858" /db_xref="GeneID:1114506" /translation="MISFVQTGNGIVDFILTLIFLVLITYPILGGFAWFIGVLCYSFL FKYKQKNWDDIPVEVEPFVTIMVPAHNEEIVIEDTLNYLMTKINYENYEVLVTDDGST DRTPEILKELQEKYDKLRVIRIEKNKGKAHAFNIGLGFAKGELVLSNDADTVPEPDSL NRYINYFIRQDSTNISAVTANMDVQNRAKLIAKSQTVEFSSIVGIIKRTQLGVLGSIY AYSGANTMYRKDALIDVGLFRQDRATEDISIAWDHQMDGWLSLFAPRIMFFMEVPESL KMLYRQRKRWAKGGTEVWLTNFKKVFLHPFDNVGRTIMFIDQSFSIIWSFFFWISSVI FIWSLFQFAITGNLERIYHMLTMAFLFVCFEMISGTFQLVASLIVDDRGRKVKYLLFA PLYMLFYWVMNALTIVTTFIPAVKTILGLGSGTWKSPERKGIKVTNKKDN" gene 900367..900903 /gene="yijH" /locus_tag="L100099" /db_xref="GeneID:1114507" CDS 900367..900903 /gene="yijH" /locus_tag="L100099" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_267033.1" /db_xref="GI:15672859" /db_xref="GeneID:1114507" /translation="MLTDFEKLRRGVGFSGIISIIIGLLILFLPTKTAAIVAALVGVA LVIMGVIYIGANLVKRSEEKGNFWRISHLLLGFIYLFAGIFVFSDLNAAAESLFVLIG IFVGISWIVDGIVTLTVLTNFNSKFWGIFLSVISIIAGFTLVFSPLWGGVTLWLLLGI EFLIVGFIKMIHYYRWDK" gene 901102..901833 /gene="pnuC2" /locus_tag="L100822" /db_xref="GeneID:1114508" CDS 901102..901833 /gene="pnuC2" /locus_tag="L100822" /note="transport and binding protein; nucleosides, purines and pyrimidines" /codon_start=1 /transl_table=11 /product="nicotinamide mononucleotide transporter" /protein_id="NP_267034.1" /db_xref="GI:15672860" /db_xref="GeneID:1114508" /translation="MKNYLKWLKDELKSINTAGSIMLSFIIGVQLAFFLTSTITVLSI ITLIATLMGSACTVYMMIGKPINGLLGLISAFGYIYINWTAGHYASVLDQIVFVLLID LPLIFTWKTWGHRIENGVKFMKTKGWILTISSMLVLWWPITVIYTKLGDTNPLWDAIT LIIGAAASILVVRGYGDSYSLWLLSDVVMIILWATALMDGYSASSLAMLLTITFYLVT SLYGKFFSIWKNDKKASGEVVTERN" gene 902361..902786 /gene="yjaB" /locus_tag="L102093" /db_xref="GeneID:1114509" CDS 902361..902786 /gene="yjaB" /locus_tag="L102093" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_267035.1" /db_xref="GI:15672861" /db_xref="GeneID:1114509" /translation="MRDEYKKILVAVDGSDQSKEAIHEAVAIAKRNKTSLFVLHVKDE TRLRGTPYALAINLDDLETESKEIIAEVEVLINDEVEFEVHAFTGNPKKEIINFAKQF ELDLIVVGSNGKGLLDRMLVGSTTSYVVNHAPCNVMVVK" gene 902908..903255 /gene="hslB" /locus_tag="L102634" /db_xref="GeneID:1114510" CDS 902908..903255 /gene="hslB" /locus_tag="L102634" /note="DNA replication, restriction, modification, recombination, and repair" /codon_start=1 /transl_table=11 /product="HU-like DNA-binding protein" /protein_id="NP_267036.1" /db_xref="GI:15672862" /db_xref="GeneID:1114510" /translation="MASKQELIDYVADRTELSKVNAAKAINAFVEAITYYISEGTPVH ISNFGTFEVRKRAARVSHDVHSREKILVGEQNIPVFRAGKALKLATKQELSDEDMVIE TLSNMILEVQQHD" gene complement(903327..903860) /gene="yjaD" /locus_tag="L103086" /db_xref="GeneID:1114511" CDS complement(903327..903860) /gene="yjaD" /locus_tag="L103086" /note="belongs to TetR/AcrR family" /codon_start=1 /transl_table=11 /product="transcription regulator" /protein_id="NP_267037.1" /db_xref="GI:15672863" /db_xref="GeneID:1114511" /translation="MSNDSRKDRTKLQLRDAMIQLLGEKSFDQISTTELVKLAKVSRS SFYTHYQDKYDMIEAYQRRLFETIQYVFEKNNGNIHATMLETFEFLKGNQIYAALLSE NGSKEIHQFMLQKLKELIQSSFFPQSKHLKLGKLGEIYATTYYANAIFGTTQSWIRRK QKETPTQIANLLVELIN" gene 904024..906423 /gene="yjaE" /locus_tag="L103741" /db_xref="GeneID:1114512" CDS 904024..906423 /gene="yjaE" /locus_tag="L103741" /note="transmembrane protein, similar to phage infection protein Pip" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_267038.1" /db_xref="GI:15672864" /db_xref="GeneID:1114512" /translation="MLKKEWQAILKHKFFIIVIIALALVPAIYNYIFLGSMWDPYGKL NDLPVAVVNLDKTSELNGKKFKLGDDVIAEMKKSKDLDYHFVSEYKASKGIKKGDYYM VITFPENFSENATTLMNKKPKTVQLDYQTTRGHNYISSKMSESAMNQLKSEVSKNITE TYTKEIFAKLGDMKSGMKEASDGSNKLADGTSSALNGSKELSSNLNTLSSSSLTFTDG ANNLNSGLNKYVSGVNQAANGGQQLSSGADQFVSGTQQLAAGTQTLADKSKELSAGIS QISQGSEAVSQLQSGVQQLSEGLSQMAQKTTLSETQQQNISAVQNGLTELNQELQKNT IDPNLAANIQNNLKGLGATVTNLANDQVAASKTAVESTETFKTLSESQKTDIRNALDN SVGAGAVQTDLLSLNKNIKGVQDSLTSLLPMFGKIADLKTLVPGASQIIADLSGGLNE VNTNVNTKFIPGINQLNAGLTNFNDQLTSGSQKLTSGFAQYADGVNQANAGAQQLASK SKDLQSGTMQLVSGLSQLQANGSTLTSGSNQLAGGAQQISSVSQQLANGGSSLTSGLG TLNTGANNLSTALTKADDTLSATNNSNENAKKVAAPLKLKHTDHDNVPENGAGMTPYM INVALFIGALATNVVIGIGFSGEKWKSGREFMLAKIGTNGLVALLQGIIVWGAVALLG LRPNHLWEMLLSVLLISFAYMAINTFFLTALGKIGEFLMIVVLVLQLATSAGTYPLQL APKIYQVISPWLPMTYGLKMLRETIGLNGAILPEAILFVVIIALFTFMLSFFKKFSRF A" gene 906609..906941 /gene="yjaF" /locus_tag="L106356" /db_xref="GeneID:1114513" CDS 906609..906941 /gene="yjaF" /locus_tag="L106356" /note="probably aromatic ring hydroxylating enzyme, evidenced by COGnitor" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_267039.1" /db_xref="GI:15672865" /db_xref="GeneID:1114513" /translation="MADKYTEEQVNEIKDKILSALENVIDPELGIDIINLGLVYEISF EDNGFTEIKMTLTTMGCPLADLLTEQIHDALKEVPEVGEIKVNLVWYPAWTVDKMSRY ARIALGIR" gene 907791..908990 /gene="ftsW2" /locus_tag="L107499" /db_xref="GeneID:1114514" CDS 907791..908990 /gene="ftsW2" /locus_tag="L107499" /note="cell division protein; similar to putative cell division protein FtsW of Enterococcus hirae" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_267040.1" /db_xref="GI:15672866" /db_xref="GeneID:1114514" /translation="MDKKITKNSFLDLSILIPYLILSAVGLLMVFSATVPYQINRGLS PYRLAISQGVFIIISFVALIIIYRVKLRIIKNEKILKIIFLIIILLMIYSRVGPNTSA NGAHGWIPLSGIGTIQPVEFAKLFTVWFLASIFSNRQEEIEKNDIQAIFKGNNLIKKV VGGWRFPIILLMIVELSMPNLGNTAIIGLLALIMIGASGISWRWFSGYGKMLLTISLS FLLFLFISGGDLIPGSYINARFKAFVNPFTDLASSGHQLANSYYAIVDGGWFGRGLGN SIEKQGFLPEAHTDFIFSVIVEELGIIGGIIILAVIFFMITRMLLVGMRVKDPFNSMI SIGCSSFLLIQVFVNLGGAIGLVPETGVTFPFLSQGGSSFLISTLAVGLVLNSSADEK LKSLSKL" gene 909021..909365 /gene="yjaH" /locus_tag="L108747" /db_xref="GeneID:1114515" CDS 909021..909365 /gene="yjaH" /locus_tag="L108747" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_267041.1" /db_xref="GI:15672867" /db_xref="GeneID:1114515" /translation="MKRKEIRQKKKIKRSKKVYFVRFMSLFVILVVAVSAVIYVQAEK TLTKTHVNTKIKSSSISAKKPLNILLMGVDTGDNSRGGADSWNGNSDSQIILTLNPRT KQPLLFQWNEIR" gene 909275..909574 /gene="yjaI" /locus_tag="L109013" /db_xref="GeneID:1114516" CDS 909275..909574 /gene="yjaI" /locus_tag="L109013" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_267042.1" /db_xref="GI:15672868" /db_xref="GeneID:1114516" /translation="MEWKFRFSNYFNIESSDKTTTIISVERDTMTNIEDASGKIQSTQ KMNAAYPLGFNNGGLSSAVTYAMKTIGNQVGLNLNNFMIVNMDGLVNLVNDVGGV" gene 909635..910318 /gene="yjaJ" /locus_tag="L109379" /db_xref="GeneID:1114517" CDS 909635..910318 /gene="yjaJ" /locus_tag="L109379" /note="belongs to LytR family" /codon_start=1 /transl_table=11 /product="transcription regulator" /protein_id="NP_267043.1" /db_xref="GI:15672869" /db_xref="GeneID:1114517" /translation="MPGSDKTVDSGAIYISNTEPEYKAYVPYLSGNPKQLINGEQALV FARDRDTLANGNYGRAAHQREVMTELMNKMLSLNSVFKYQSFLNDISSDFKTNISINL ANLTALMAYKDCLNKVVSIQYQGVSQMVDGGSYEFIPENVDLAIQNIMRQANDESVND KLDQSVITYENYFGSETDQYYMPSATVTIKGEKSETYGVDTKGSLVKINKENAQDYVS SQGGALVAN" gene 910421..910690 /gene="rpsN2" /locus_tag="L110165" /db_xref="GeneID:1114518" CDS 910421..910690 /gene="rpsN2" /locus_tag="L110165" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S14" /protein_id="NP_267044.1" /db_xref="GI:15672870" /db_xref="GeneID:1114518" /translation="MAKKSKIAKFKKQQKLVAQYQELRQELKKEKNYEALRKLPKDSH PNRMKMRDRIDGRPRAYMRKFGMSRVNFRKLAHEGKIPGVKKSSW" gene 910856..911485 /gene="yjbB" /locus_tag="L110588" /db_xref="GeneID:1114519" CDS 910856..911485 /gene="yjbB" /locus_tag="L110588" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_267045.1" /db_xref="GI:15672871" /db_xref="GeneID:1114519" /translation="MNKKLKAIFIIEIFIVLGLIFHVISTPRMWVVLALAILFTILAT RSRASVLRIISFIFWAISVMILFTVGWFWLAIIFPTIACIVFWKNNPREGGVKNFSYE DISQDESESIMNENQNDIIDLDDVTFKPSGNSLSIKKMTGNTKIIVPEDVGVSLDLTT NAGLVKIFNEAAQINAGNVRYFSENLDQAEKRIKINIRVDSGNIEVIRG" gene 911482..912480 /gene="kinD" /locus_tag="L0126" /db_xref="GeneID:1114520" CDS 911482..912480 /gene="kinD" /locus_tag="L0126" /experiment="experimental evidence, no additional details recorded" /note="evidence experimental PMID:9172368; two-component system" /codon_start=1 /transl_table=11 /product="sensor protein kinase" /protein_id="NP_267046.1" /db_xref="GI:15672872" /db_xref="GeneID:1114520" /translation="MKKSLFTTFLAVFSIILIMYLLLFIMMNSGQPLGGLNTANIIRE LRDNFYGLWIFISVAGLLALIFTLFNHIENMAIQQKFQDDIKLLEENQQPESPELQAV HDKIMNMSAELQELSKQKSADKAEIIELERKRISRELHDSVSQELFATTMILSSFAGS TPNLTKEQIETRTQLVLKVLHSAQNEMRALLLHLRPVELDGKSLAEGLSALTDELQAK ISANITVKLADIEATSNVEDNLFRMAQEILSNTLRHSQAEHIEVSLRESLGNIFLKIA DDGVGFDVSTSDKTASYGLANIKERALLIGGDAKVISAPGAGTTVEIIIPKAKPSL" gene 912508..913137 /gene="llrD" /locus_tag="L0127" /db_xref="GeneID:1114521" CDS 912508..913137 /gene="llrD" /locus_tag="L0127" /experiment="experimental evidence, no additional details recorded" /note="evidence experimental PMID:10708382; two-component system; involved in salt and osmotic stress resistance development" /codon_start=1 /transl_table=11 /product="two-component system regulator" /protein_id="NP_267047.1" /db_xref="GI:15672873" /db_xref="GeneID:1114521" /translation="MEKIKLLIVDDHQMVRLGLSSFMNIQPDIEVVGEAADGESGFLK TEMLDPDVILMDLVMDRLDGIGATQKILAKNPERKILILTSFIDDEKVFPALAAGAKG YILKTSQAADIASAIRKVANGEDVLSDAVKEKIAQQKHRKHELYDDLSKRELEVLKVL ATGLSNQEIADELFISLKTVKTHVSNIFNKLEVSDRTQATIYAIQHHLV" gene 913208..914014 /gene="yjbC" /locus_tag="L112952" /db_xref="GeneID:1114522" CDS 913208..914014 /gene="yjbC" /locus_tag="L112952" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_267048.1" /db_xref="GI:15672874" /db_xref="GeneID:1114522" /translation="MEKILEKAPKIKIIFFDIDDTLRVKDSAFMPESITEVFYKLREK GIMTGIATGRNLFGVVPEVRALKPDFYVAINGAYVENAQTGEVLYKNTFSKELIEEII TWLKNEQSGYSFVAADSLKISKWDKIASDAIGPVYSELEENPNYYKTNEIYQMLTISD HDDQLELPEILSDKIRLVRWHPNSSDIVPMEGSKAIGCQKVLQELGLKAENMMNFGDG LNDRELFDFAGLSVAMKISHPEILEKADYITDSVENDGILKALQALKIID" gene 914117..914707 /gene="ppiB" /locus_tag="L113864" /db_xref="GeneID:1114523" CDS 914117..914707 /gene="ppiB" /locus_tag="L113864" /note="translation; protein modification" /codon_start=1 /transl_table=11 /product="peptidyl-prolyl cis-trans isomerase" /protein_id="NP_267049.1" /db_xref="GI:15672875" /db_xref="GeneID:1114523" /translation="MTYPQLELENYKGTTAIINTNHGKMTVKLFDNLAPKTVKNFIEL SKEGYYDGVIFHRIIKDFMVQGGDPTGTGMGGSSIYGEKFEDEFSMDLFNLRGALSMA NAGPNTNGSQFFIVQNKNLPYPKDSLIQGGWPEEVAETYTGGGTPHLDGRHTVFGQLV DEESYKVLDEIAAVRVGAQDKPVDDVVIESVEIIEP" gene 914709..915140 /gene="yjbE" /locus_tag="L114402" /db_xref="GeneID:1114524" CDS 914709..915140 /gene="yjbE" /locus_tag="L114402" /note="adaptations and atypical conditions; polyribonucleotide nucleotidyltransferase" /codon_start=1 /transl_table=11 /product="general stress protein GSP13" /protein_id="NP_267050.1" /db_xref="GI:15672876" /db_xref="GeneID:1114524" /translation="MEKKSPKIGDIVEVEIIGMQDYGAFVKFYLDNSSNKEKIEQKGL IHISEIQSGYVKSIHDIAKIGQKVMAQIIDIDEYNGKISLSIRSLEKNPQVHHIYRKK HFTDSRDKIGFKTLANYLPGWIEENKAYLKAKKNAQSEDFL" gene 915137..915742 /gene="yjbF" /locus_tag="L114884" /db_xref="GeneID:1114525" CDS 915137..915742 /gene="yjbF" /locus_tag="L114884" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_267051.1" /db_xref="GI:15672877" /db_xref="GeneID:1114525" /translation="MNDNVLRYIKRVFNLITILGFVATIVGGIYLWRLGAFQNQAVLQ QLIVAHRFLGPLIFLCMQILQVIVPIIPGGITMAAGVMIFGPVWGFVYNYFGIVAGSF LLFHFGKKYGSSLAKTFVKEKTYNKYMAWLDKGQKRFNIVFALLILSPIAPDDALVLI ASQTKMSWKFFTWSILLCKPLPILLYSYLLIFGGDLLGHIL" gene 915962..917206 /gene="rodA" /locus_tag="L115706" /db_xref="GeneID:1114526" CDS 915962..917206 /gene="rodA" /locus_tag="L115706" /note="cell division; similar to rod-shape determining proteins from different species" /codon_start=1 /transl_table=11 /product="rod-shape determining protein" /protein_id="NP_267052.1" /db_xref="GI:15672878" /db_xref="GeneID:1114526" /translation="MKNKKANRFTFDSRIDYGLILPAFMLILIGLYALYVAVSHDHPT QATNLVVQQGTWVIVGLFVALIVMHMDSRFLWNLTPFFYLLGLILMVLPIFFYDKATY ASTGAKNWLAFGGRNLFQPSEFMKLSYILFSARIVVTFQNNLKKRVLKDDFRLIGLLI LETIPVAILSVFQKDFGTFLVFAAIFAGIILVAGISWKILAPAFLFVAAVAVGIVALV ASPEGQKFLESTSFAQYQVNRFIAWLHPFEYSQTFSLQQARSLISVGVGGLWGKGIGV ANVNVPVRESDMIFTVIAEDFGFIGSAFLIFLYFMLIYRMIRVTFKSNNQFYTYISTG ITMMILFHVFENIGAAIGVVPLTGIPLPFISQGGSALMANIIGLGLVLSMKYNQLPEF VKEQRQIPVKGDSRKNRRRNRH" gene 917431..918501 /gene="butB" /locus_tag="L117145" /db_xref="GeneID:1114527" CDS 917431..918501 /gene="butB" /locus_tag="L117145" /EC_number="1.1.1.4" /function="second step in 2,3-butanediol synthesis from diacetyl" /note="energy metabolism; fermentation" /codon_start=1 /transl_table=11 /product="2,3-butanediol dehydrogenase" /protein_id="NP_267053.2" /db_xref="GI:30024012" /db_xref="GeneID:1114527" /translation="MRAARFYDRGDIRIDEINEPIVKAGQVGIDVAWCGICGTDLHEF LDGPIFCPSAEHPNPITGEVPPVTLGHEMSGVVNFIGEGVSGLKVGDHVVVEPYIVPE GTDTSETGHYNLSEGSNFIGLGGNGGGLAEKISVDERWVHKIPDNLPLDEAALIEPLS VGYHAVERANLSEKSTVLVVGAGPIGLLTAAVAKAQGHTVIISEPSGLRRKKAQEAQV ADYFFNPIEDDIQAKVHEINEKGVDAAFECTSVQPGFDACLDAIRMGGTVVIVAIWGK PASVDMAKLVIKEANLLGTIAYNNTHPKTIDLVSTGKIKLDQFITAKIGLDDLIDKGF DTLIHHNETAVKILVSPTGKGL" gene 918527..919288 /gene="butA" /locus_tag="L118271" /db_xref="GeneID:1114528" CDS 918527..919288 /gene="butA" /locus_tag="L118271" /EC_number="1.1.1.5" /function="first step in 2,3-butanediol synthesis from diacetyl" /note="fermentation" /codon_start=1 /transl_table=11 /product="acetoin reductase" /protein_id="NP_267054.1" /db_xref="GI:15672880" /db_xref="GeneID:1114528" /translation="MSKIAAVTGAGQGIGFAIAKRLYNDGFKVAIIDYNEETAQKAAK ELGENSFAIKADVSDREQVISALNAVVDKFGDLNVVVNNAGIAPTTQIETITPEQFHQ VYNINVGGVLWGTQTSTALFRKLGHGGKIINATSQAGVVGNPNLMLYSSSKFAVRGMT QIAARDLAEEGITVNAYAPGIVKTPMMFDIAHQVGKNAGKDDEWGMQTFAKDIAMKRL SEPEDVANVVSFLAGPDSNYITGQTIIVDGGMQFH" gene 919808..921349 /gene="yjcA" /locus_tag="L119564" /db_xref="GeneID:1114529" CDS 919808..921349 /gene="yjcA" /locus_tag="L119564" /note="transport and binding protein; contains two ATP binding domains" /codon_start=1 /transl_table=11 /product="ABC transporter ATP binding protein" /protein_id="NP_267055.1" /db_xref="GI:15672881" /db_xref="GeneID:1114529" /translation="MSNIEFKDLTFGYGDNLIFNHAQINIDDRWKLGLVGRNGRGKST LLNLLQGKITTDSSITTDKNFVYFPQLLTEEDFNDKDKSKKQNTADKYSVESLSVKIT DRNSQLTYYVLNELAEFEQWKLERELSLLKVDLEILWRPFGSLSGGEQTKCLLAILFL DEDNFPLIDEPTNQLDLESRKIVADYLQKKSGFIVVSHDRNFLDEVCDHTLAIERQQI VLYQGNFSTYEREKQLRDDFELAEDEKLRKDISRLKKTSLEKRDWSNQRENVAGATFV DKKVAKKQNQRAKSIEKRMGQEVENKEKLLKNIEKTEPLIMNFQPSHHKRLIQFENFS LGFTEKLLFQPIDFSLKVGEIAAIVGPNGQGKSSIFKYLSGDFSGEHSGFVQFPQGIR LSFVRQIYDNRGYLKDFATEYQLNYELFLANLRKLGMECKQFSQKIETMSQGQQKKVE LARSLSQEAELYLWDEPLNYLDVFNREQIIQLLETYHPTMLLVEHDQAFVEKISNQII NLKDT" gene 921766..923388 /gene="mleS" /locus_tag="L121483" /db_xref="GeneID:1114530" CDS 921766..923388 /gene="mleS" /locus_tag="L121483" /experiment="experimental evidence, no additional details recorded" /note="malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate" /codon_start=1 /transl_table=11 /product="malate dehydrogenase" /protein_id="NP_267056.1" /db_xref="GI:15672882" /db_xref="GeneID:1114530" /translation="MRAHEILNNPFLNKGTAFTMKERQELGLIGLLPPTVQTIEEQAE QTYEQYLTKPSDLEKRHFLMEIFNTNRTLFYYLFNKHIVEFNPVVYDPTIADTIENYS HLFVDPQYAAYLDINHPENITETLKNAAGDREIRLIVVTDAEGILGIGDWGTQGVDIS VGKLMIYTAAAGIDPASVLPVVIDAGTNRKELLEDHLYLGNHQERIYGDQYYSFVDQF VETAESIFPKLYLHWEDFGRSNAATILNNYKTKIPTFNDDIQGTGIVVLGGIFGSLDI TGEKLTDQVYLCYGGGSAGAGIAGRVHAEMVSEGLSEEEAYKHFFMIDQQGLLFDDME DLTPAQKPFAKKRADYKDAGDMTDLLNVVKTVKPTILVGTSTNPGAFTKEVVEAMCAN TERPVIFPISNPTKKMETTAEQVIEWSDGKAFVATGVPSGTISYKGVDYQIGQANNSL IYPGLGLGMLASEAKLLTDEMIGAAAHSLSGLVDPGKPGAPVLPPFEFVADVSIKVAE AVAKKAQEQGLTESKETDMAKAVRDLKWYPEY" gene 923403..924680 /gene="mleP" /locus_tag="L123159" /db_xref="GeneID:1114531" CDS 923403..924680 /gene="mleP" /locus_tag="L123159" /experiment="experimental evidence, no additional details recorded" /note="evidence experimental PMID:8405453; transport and binding protein; carbohydrates, organic alcohols and acids" /codon_start=1 /transl_table=11 /product="malate transporter" /protein_id="NP_267057.1" /db_xref="GI:15672883" /db_xref="GeneID:1114531" /translation="MKKLKETKISGISLPLYAFFVAVIIVVTLLGKLPLDMVGLTLLL VTLGHLLYFIGEKFPIMNSYLGGGSVFTLIGATLLSFFHIVPSNVIGAVSNFMGGKFG FLDFYIAALICGSILGMNRNLLVKASKKFIPIALITMVIGFFSVGLVGMLIGNGFADS VMYVSMPMMSGGMGAGITPLSQIYAAGLAHGNQAAIFSQLAPAVTFGNILAIIGALSI AKVFNKSKYNGHGTLVAATKEELAKPKIKLDAQQIGTGMLFAFALLMAGDILNKFFPN IHQYAFMIIIVFILKATNTVPKDLEESVVMFNQVIMTNLTHAVLAGIGLALIDLNTLA SAFTWQFVVLCLTSVVVMGLASWFLARLFGLYPVETAIGAGMINNSMGGTGNIAVLSA SDRMEMIAFAQMANRLCGAIVLIFGGILIRFFY" gene 924977..925909 /gene="yjcD" /locus_tag="L124727" /db_xref="GeneID:1114532" CDS 924977..925909 /gene="yjcD" /locus_tag="L124727" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_267058.1" /db_xref="GI:15672884" /db_xref="GeneID:1114532" /translation="MNPLDVWYNIKMNVKKQIFKGTLYAVVAGCMWGISGIFGQLFFR DYHGSPLWITSTRLTIAGIILLAMSFSRDHKRFFDVWKSKKNMPTLFLYVFGGVFSVQ YFYYVAIQLSNSATATILQYTAPVFIMLYLLIFQRQVPKPKSVLFVILAMIGVFLLIT DGNIKHLSISPLALVTGLLAGVAVVIYSIIPRPLLDKYGALNMTGWGMMLAGIACNIF YPVWRIDFRIEPLSIFYVLTISIVGTALAFLLLLRAFQLISPLVVSVATATEPLTSVF LSIPLFGLKLTPLELLGIVMVIVSVILLSKSEQA" gene 925990..927081 /gene="yjcE" /locus_tag="L125734" /db_xref="GeneID:1114533" CDS 925990..927081 /gene="yjcE" /locus_tag="L125734" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_267059.1" /db_xref="GI:15672885" /db_xref="GeneID:1114533" /translation="MEEYYLPSELKTDVWKLAFLWSIFIFLSFFENFFIQESINSESL RHIILSLLIGLLLIYFLIFLINHSRRKLVIINEEGIQLRLLFREVKIEWRDIRGMYVR SGVLYICEQTSFNPVYIEKKIWYKRLKFYQNYFDPGHNLKIVLSIQGSIISMDINELS IICEEVWLKQSGFEQRDLFTENPFEKIDEATRARKLNPWKRILLYAVFFIIALGGLIF KDKIKETYSLVDNQVYYVVDSKTNNVQFAFETSTFEKKQEASIVTDRAMRELSYYSED YFNDIERKYYDHQLLTGENFAIVAASHPTWWKQTFDFSRYVKKNQLQKITLTSIKKPL LKNYLTAQMELTQNQFKGKKFPVKILKAN" gene 927135..927782 /gene="yjcF" /locus_tag="L126819" /db_xref="GeneID:1114534" CDS 927135..927782 /gene="yjcF" /locus_tag="L126819" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_267060.1" /db_xref="GI:15672886" /db_xref="GeneID:1114534" /translation="MDYENYIWDLGGTLLDNYESSSHAFAATLWSMAERVVLRTDVYD ALKVSTAYAVEKYASDLPGFLEEYKKLEAEELEKPILFSGAKKVLTDLSVKGNKNFMI SHRNHQVLTILSAAEIDSYFTEVVTSDNGFKRKPAPESINYLLNKYKLNPKKTVMIGD RPLDIEAGNAAGISTIYFDSSTDSTLSGQAINTVSDGSLNSKPTHIIHQLTEIIL" gene 927935..929890 /gene="gyrB" /locus_tag="L0283" /db_xref="GeneID:1114535" CDS 927935..929890 /gene="gyrB" /locus_tag="L0283" /EC_number="5.99.1.3" /note="negatively supercoils closed circular double-stranded DNA" /codon_start=1 /transl_table=11 /product="DNA gyrase subunit B" /protein_id="NP_267061.1" /db_xref="GI:15672887" /db_xref="GeneID:1114535" /translation="MNEENKNLEMLADEYDASQIQVLEGLEAVRMRPGMYIGSTSKEG LHHLVWEIVDNSIDEALAGFASHIEVFIEPDNSITVVDDGRGIPVDIQEKTGRPAVET VFTVLHAGGKFGGGGYKVSGGLHGVGSSVVNALSTVLDVTVHKDGQKYYQEYHRGLVG DDLKIIGETDRRGTTVHFVPDPEIFTETVEFDFDKLATRVRELAFLNRGLRISLTDKR EGNEKNEVHFHYEGGIQSYVEYLNENKTVIFEPAIFTEGEMDGIAVEVAMQYTDTYHS VVMSFANNINTHEGGTHEQGFRTALTRVINNYAKQNKILKENEDNLTGDDVREGLTAV ISVKHPNPQFEGQTKTKLGNSEVTGIVNKLFAEALTTFMLENPQVARKIVEKGILASK ARIAAKRAREVTRKKSGLEISNLPGKLADCSSNNPEQTELFIVEGDSAGGSAKSGRNR EFQAILPIRGKILNVEKATMDKILANEEIRSLFTAMGTGFGADYDLSKARYHKLVIMT DADVDGAHIRTLLLTLFYRYMRPVVEAGYVYIAQPPIYGIKVGSETKEYIQPGENQEK DLQEALARWAQGRTKPTVQRYKGLGEMDDHQLWDTTMDPEHRLMARVSVEDAAEADKI FDMLMGDRVEPRREFIENNAQYSTIDA" gene 930397..931134 /gene="yjdA" /locus_tag="L130150" /db_xref="GeneID:1114536" CDS 930397..931134 /gene="yjdA" /locus_tag="L130150" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_267062.1" /db_xref="GI:15672888" /db_xref="GeneID:1114536" /translation="MKQNKYDNERFFKNYASMSRSQKGLKAAGEWSELEKLLPNFQDK KVLDLGCGYGWHCKYVVNHGAKEVVGIDLSHKMLEVALDINNDKKITYQQSAIEDINF PADTFDVVFSSLAFHYISNFEDLVCKISKWLKKNGEFIFSVEHPLYTSSGKQDWCYDA EGKILHFPVDNYYYEGKREVNFLGEPIIKYHRTLTGYINSLLSSGFELTNLIEPKPPI EMRELEEMKNEMRRPMMLLISARNKKS" gene 931316..931921 /gene="yjdB" /locus_tag="L131027" /db_xref="GeneID:1114537" CDS 931316..931921 /gene="yjdB" /locus_tag="L131027" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_267063.1" /db_xref="GI:15672889" /db_xref="GeneID:1114537" /translation="MSACSSKQNSQTTKESSKSSQSSRSSSITQSTSSTTQSSSIIKE SSSSIEKSISPSTSTQIRKWNPEKNQRLAEFMSAWGIEMGQSYSQYGPNHNLNLYGLS IPWSVIDNNSTWKAAINNQPIELKWSETGEDSGGYQLVDVYSDMNDKNSGVNHVYLFV IKSGNPMVLYTAQNQGNTNNYLYLKETENNELKNAFARIVG" gene 932070..932534 /gene="rmaH" /locus_tag="L131803" /db_xref="GeneID:1114538" CDS 932070..932534 /gene="rmaH" /locus_tag="L131803" /note="MarR-family regulators" /codon_start=1 /transl_table=11 /product="transcription regulator" /protein_id="NP_267064.1" /db_xref="GI:15672890" /db_xref="GeneID:1114538" /translation="MDSNKAAEVFLTTVIKRGKAEMMHRFNTYSQGEHLVLGYLYKEA GKQIVPSKIAKFTHTSTARIATILNNLESKNLVTREISRTDRRKILVAITDKGRHVAE EIRVEACSNLARVFEEMGEERTESFIENFKLFLEIGMKLAKEDKEKEEEKNA" gene 932527..934071 /gene="yjdE" /locus_tag="L132251" /db_xref="GeneID:1114539" CDS 932527..934071 /gene="yjdE" /locus_tag="L132251" /note="transport and binding protein" /codon_start=1 /transl_table=11 /product="multidrug resistance protein" /protein_id="NP_267065.1" /db_xref="GI:15672891" /db_xref="GeneID:1114539" /translation="MPDTYEKDYHLDIHGKHYSRIGMLILILVGTFGAMLMQTSLGTA IPTLMNDFNISMSTAQQATTWFLLANGIMVPISAYLATKFPTRWLYVTAYATLFIGMF VAYSAPTSSWWVFLAGRILQAIAVGITMPLMQVALVNMFPAKQMGAIMGVAGVVLVLA PALGPTFAGWLITHKFNLIFWTFAASWRTIFLIPMIVVGVVFLISIFAMRDVIPNRPM KLDFLSVLLSVVGFGAFLWGFTNVATDGWGKFNTVIAPIVGGLIIIFLFGLRQLKMDD PFLDIRVFKIRQFTLVTLALALSTMAMMGVEMMLPLYLQDVHGLSAFNSGLVLLPGSL MMAVVAPLAGGVYDRIGSKRLAVIGFLVLALGTIPFMFFTATTPDHFDTLLYGLRMVG VGMVMMPLTTSAMNAVPVNEVAQATASNNTARQVASSVVVALLSSVAQNVITNNMPAS SLKSTNPLQFANKAIEAMLQGYHASFAIGLVFAIIGIGVALFLKSGRMISGVPVEEQD LKGENK" gene 934071..934790 /gene="yjdF" /locus_tag="L133825" /db_xref="GeneID:1114540" CDS 934071..934790 /gene="yjdF" /locus_tag="L133825" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_267066.1" /db_xref="GI:15672892" /db_xref="GeneID:1114540" /translation="MLIILLLVVFMIGTFFGFMFIKNTIAHWLVGGISFLLLAGSVTM LTMHIRDNWGMKEVTTSTTHQIYTAGDKSAPYGMMIKAEIGKNTDNYVFVYRNNEKSE KADTNFKPDEKHISEAVKKSATYKLVDDTKATVTTKTTRCVWSSDFYKLLFSVGGEQN ELVKQNSVVSVPKDTWLVLTQDQVKKLSQEAPAMQKQMEAQLKADPQKAAQLAALQKS NPTEYAKMQVKQIKQLLGITE" gene 935545..935880 /gene="tagR" /locus_tag="L135296" /db_xref="GeneID:1114541" CDS 935545..935880 /gene="tagR" /locus_tag="L135296" /note="similar to EpsR of the epsRXABCDEFGHIJKL operon of Lactococcus lactis plasmid pNZ4000" /codon_start=1 /transl_table=11 /product="transcription regulator" /protein_id="NP_267067.1" /db_xref="GI:15672893" /db_xref="GeneID:1114541" /translation="MIKVVESIFYNQLISLAQKHCKSINRVEKDLGYPRNALHNYKKG GSIPSGIRLMELANYFDVTPEFLIGKDSLLKKKQDLTSREIFDNMSLSQRHEIAELCQ EWLLSLPYN" gene 935988..936896 /gene="tagL" /locus_tag="L135727" /db_xref="GeneID:1114542" CDS 935988..936896 /gene="tagL" /locus_tag="L135727" /note="surface polysaccharides, lipopolysaccharides and antigens; similar to EpsL protein of exopolysaccharide biosynthesis operons of S.thermophilus and l.lactis NIZO B35" /codon_start=1 /transl_table=11 /product="exopolysaccharide biosynthesis protein" /protein_id="NP_267068.1" /db_xref="GI:15672894" /db_xref="GeneID:1114542" /translation="MFKKILSKSLVILFLVVIICFLLILSLGHIHGRSKKNSAVQTQQ VKKTSKSNGYSLSDSQISNSDRLKENDQPDISVEDTGKAGWLQIVSQGSGKKFTDLSD GNFKIYKAHSPQLLKTATSADSPVMSMSEVVSKYPNSLIMNASGFNMSTGKVTGFQIN NGKLFKDWNSDKRAKNAFVFNKDGSVKVYDSSTPASKILQNGAETSFSFGSILIKDGK SLPSDGTVNWEIHSFLGNDKNNNIYLIISDTSTGYQAIMSELQALHLENAIVMDGGGS SQMSLNGQPIYPSQDNRSVNDYIVLK" gene 936920..937204 /gene="yjdI" /locus_tag="L136668" /db_xref="GeneID:1114543" CDS 936920..937204 /gene="yjdI" /locus_tag="L136668" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_267069.1" /db_xref="GI:15672895" /db_xref="GeneID:1114543" /translation="MIKIDTSKESRWRKVYGVFLIAATIMILLLIGGELFAFIDIDKP PYDWIINTMIFFFTVDYLWRLKRAKKKWKFIKNNIYDLIAILPFSFYFLS" gene 937270..937692 /gene="yjdJ" /locus_tag="L136943" /db_xref="GeneID:1114544" CDS 937270..937692 /gene="yjdJ" /locus_tag="L136943" /note="transort and binding protein, cations" /codon_start=1 /transl_table=11 /product="potassium channel protein" /protein_id="NP_267070.1" /db_xref="GI:15672896" /db_xref="GeneID:1114544" /translation="MFGKFNRSSNRFLNTNSFYQVANIAVAIIMTDSFVFSLFEKISF GDAVWWAIVTTTTVGYGDFYPKTIVGKFAAAILMFLGIGLIGYLTSTITNYFTNDMEQ KEKSQELEQISKIESLERKIDLLVNKIETLEGNNRKNK" gene 937689..939089 /gene="tagH" /locus_tag="L137446" /db_xref="GeneID:1114545" CDS 937689..939089 /gene="tagH" /locus_tag="L137446" /note="transport and binding protein, carbohydrates; organic alcohols and acids" /codon_start=1 /transl_table=11 /product="teichoic acid ABC transporter ATP binding protein" /protein_id="NP_267071.1" /db_xref="GI:15672897" /db_xref="GeneID:1114545" /translation="MNTNKVKIKAEYLTKKFELLPAKSSKNKAKSLIGSNSKNEKDFW ALRNISFEIRDGECVGVIGLNGAGKSTLSNIISGQIAQTTGRVEINGDVSIIAASAGM QNNLSGRENIRLKALMVGLTNKEIKSKMDDIIEFSELGPFIDQPVKTYSSGMKAKLGF SIMVHQNPDIMIIDEGLSVGDKTFVDKSQKKMFEFRDEGKTILLVSHDMRTIKEWCDR VIWLNYGEVKAYGRPEEVIPEYEKFVQWFKKLPKKEQEKFKTDQRQAQLDYSVEELKA EIVSQNPSKSRRVQREVTEELKNKKDNHKLSLMSKVIVWLCLLAFIWITLVSLSNATL AESLRHPKTFFTERLFKSDTRNMTSTTKKEAVVKTSSSPKKKVSQAKKTTKVSSTQKN TSSSSSTSNQNTYIVQAGDSLSIIAENHGYSVEEIQQVNPGVDFSVIHPGQEINLPEP TTSANSTTEQSDGANQ" gene 939089..939898 /gene="tagG" /locus_tag="L138756" /db_xref="GeneID:1114546" CDS 939089..939898 /gene="tagG" /locus_tag="L138756" /note="transport and binding protein, carbohydrates; organic alcohols and acids" /codon_start=1 /transl_table=11 /product="teichoic acid ABC transporter permease protein" /protein_id="NP_267072.1" /db_xref="GI:15672898" /db_xref="GeneID:1114546" /translation="MKDAILYIKEQIKYFRIAVNLSKYSTKSTSMQNRLGRLWEILDP LVQLAINYIIFGILMHRSAPAGLPPLSWMFIGMGVYSFAQHIIVTGSKSVSTQFKMTA KMKFPVSIMPTASMIGFLTEFYIMVGAGLVIAMFSGYYPSLYWLQLLYYLPMLIIFSL SLSLLCSSIEIVFPDFKFFLNYIFKFLMYGSGVIFDLSQFKIIPKFLIQAQMVDPFYY LIEGFRDIAFGRAWFWQKGIFNVSFWLLTIFILIVAANFHMKIRDRISDYL" gene 939920..941362 /gene="yjeA" /locus_tag="L139656" /db_xref="GeneID:1114547" CDS 939920..941362 /gene="yjeA" /locus_tag="L139656" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_267073.1" /db_xref="GI:15672899" /db_xref="GeneID:1114547" /translation="MSVRKAVRKAVRKVIPKEFRQKLKEQFKIKTEADEEKTTRTKAK ISSIKSETVAIFSDNLNVIFENEKFSENTKISIRKRGKVEQEIIGRNYSSSKIIIPIE IFLGELQKMEEKIERFDFFADFGNGHWIRLKSMLPKESNQFAYQNVSDDKVELIKIYT TLDGYYALAFNKFDEGLVLYEIDEELEILKLKNFSNKEDKELLTSHGKLLLNKNSKED LSLSINEIINYKNQQIDELNFALLEAKTVIPLIGLTITLSSNLIQNLVKVQVVTEKFP VIEAIKQENKIILKTQNMIIGWNNSLSVVAKRYNKITTLSASVSENTITLENRNEDLI KDFASTLYICRNLEEDTSVLSKLVINTPNEESDILIAQLEDDKFNFLQKNGNFDCLFD NEDSKTLLLSNPAFEVTAVYLRYIERPVFKKIEINKIGDYHIESESLKNKEFLKNFIG LHIVYQVSDKFYYTYKKISDLIVQDELEAL" gene 941343..944234 /gene="tagZ" /locus_tag="L141091" /db_xref="GeneID:1114548" CDS 941343..944234 /gene="tagZ" /locus_tag="L141091" /note="surface polysaccharides, lipopolysaccharides and antigens" /codon_start=1 /transl_table=11 /product="teichoic acid biosynthesis protein" /protein_id="NP_267074.1" /db_xref="GI:15672900" /db_xref="GeneID:1114548" /translation="MNWRRYNGRKKLAIIVPIYNVADYLKDCLNSLLKQGVPEKELQI ILVDEGSTDNSAQIAQKFVEKYPNFFELHQFENAGLGAARNRGTRLARARFITYVDSD DIVAPNSYEYMLGILERTGSQIITGNVHRFNSKKEWLNNIHARSHLGDFENTSLKEHP ELIWDSTSWNKIFCLDFLKENNLYFPEGVLYEDIPMINPAFAAAKSIDIVKRMVYLWR AREGSITESSTDAKAVLDRITITEIALAGLKKYNAPNEILDILYLKSLNLGIISMLRK EKYEYISLERKQELFNSLKEYLEKFPSDTLYQAKFDKLIYFDKVLKAKTQEEFDEITS KYLKNEIGFSGYWNDAGQYVLKSDYSDLEKIVTSDDLEIHPKIEEVVFEDDSLKIQGY FYAKYSDMSAPENVKILGISALSDDGNTINEIVGEKRNFENQRITAKFGYNLNHFVKD GADFNYDYSGYELKIPLNHLEFETTNSLAFVLEVEIDGLKFEVPIKNPISGDKPRPKV GLSNAQVFSVSYKTDWSLVLSLKERSVEELYFSEDGKELRIKGNATKIALKSGKTKLP LKLVGGRVMISQAVQEKIKSFDKSVFHWWQFITYVNGKEKSIYYSGFPKNFQNDSNLE ILFSNNGVATLGISYLYPLVEKLQVEENVLKLAFSLKGWMTEATKVQIVADPTLSMIW ETEKMNENLYQLSLPLTLDGFSDKEWLNFHVRLTFNDGYQTNELLRWGKKEFALKNEW VSANGIGWFFRSVEQKEHGAFAIKRTADRVFQEKVGNLEYVLQEKYQNWLKEPVLNDY IMMSSFWGRNNHFNDNPEALYRYIEKNYPNMTTIIVLKDAIRSYPEYPNAKIVSYGTA DYWYYLARSKYFVNNVNFTEPPRIKREEQIEIQTMHGTPLKTLGFDVLGDWKDSTYNE VLRKNGNWDYLTVPSDWVANYALKAFRVSPQIIKSGYPRNDKLFIDYKM" gene 944247..944801 /gene="tagY" /locus_tag="L143992" /db_xref="GeneID:1114549" CDS 944247..944801 /gene="tagY" /locus_tag="L143992" /note="surface polysaccharides, lipopolysaccharides and antigens" /codon_start=1 /transl_table=11 /product="teichoic acid biosynthesis protein" /protein_id="NP_267075.1" /db_xref="GI:15672901" /db_xref="GeneID:1114549" /translation="MKLAMGLPIGKKIVAYTPTWRDKDETSINNFLNVQEFYSKIPEN TVIAIKNHHYQSWKKIDKRYADKIILLDSNTEIEQLYHISDALITDYSSVMFDYSLLN KPMIFWVFDYETYVKNRGLNFDFIAEAPGPVIFQQSELSKWIENFNSIPNEFSNKIQS FRNKFGQYDSGDACEIILKKVLND" gene 944794..946425 /gene="yjeD" /locus_tag="L144551" /db_xref="GeneID:1114550" CDS 944794..946425 /gene="yjeD" /locus_tag="L144551" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_267076.1" /db_xref="GI:15672902" /db_xref="GeneID:1114550" /translation="MIKVLSFGCPATKDILDYNPFNNNRNYSLTYHKGYQAIPELNLL LDEIVPDSTNVVLFDFVSEAMFGTVYQNEKVTTRNFWIKNWGSEQVYTSTDFEATFGI WKKEVAKFIQYFLEKNIVLVLNSFRFSPEMVIDNENPQPTSKEYPTIEKQEYYNQFLQ KAEKYVEEKFPQVKIIKFNQSNKVEKNHPIKAYSFYLNEDYYLDSFVQFETLIKERFL KDVTDYNHVTSEEEIYFQMGKKNYSFLIQNEFEKTDNMLVTAWKKNDSVERKILNESA LGDYILDGKYGNTYRFIPRKSFFRKELKEFITASGNKIFFTDRRDEVRMKSETSKKIV FYFMPISGGVDWRSANAMNRLMPYYFKNLSRSLIKNTIIIRIADINGVRGSGYTNSYN YENYESDLSEFIEEMILRYIVNRKDVVLYGVSKGGAGGLFYAAKHNLNSVTVDPLISK NYSINYENDTYLFHKISKDLDLVPIINEKLEFLPAHNYVIGNHYVKETWDEILRLKVV QIFDIDDETVKIHRDISPNCVPEQLMLINRLLLNI" gene 946470..948893 /gene="tagX" /locus_tag="L146188" /db_xref="GeneID:1114551" CDS 946470..948893 /gene="tagX" /locus_tag="L146188" /note="surface polysaccharides, lipopolysaccharides and antigens" /codon_start=1 /transl_table=11 /product="teichoic acid biosynthesis protein" /protein_id="NP_267077.1" /db_xref="GI:15672903" /db_xref="GeneID:1114551" /translation="MKNFVPREYYSRFYEQSCINSDTILYESRDGSTISDSPLALFLS LANNKDYTNFQHVWVVMDKLSSLNLINVPESLKSKILFVERNSKEYVDYMLTAKYLIT NSTFQSWFSKKKEQVYINTWHGTPLKAMGFDIENQLGNTQNVLRNLLMTDYFLSPNPH TTKIFAGSGYKMRGIYKGEIIESGYPRIDLTKETSSDDAKNLLKELGIELDSNLPVVV YMPTWRGNDTQNPSDSIAQVIAELKYLRKEFLGKYNIILKVHPYLYKKAKNYKELSGV LIDDAMDANLVLAATDILITDFSSVFFDYLVTDKPIIFYAWDQDIYSEDRGMYLDMAE LPAPILKTVIEIADYLSDIDQLSQDYLGKYLRAKEKYVPYDDGNVSERIVDYIFKKEK SSQLVVKKIDSEKEKLLFYPGNLDNNGITQSFINLTNALDYQKYDVTVFTNTPKSHFF HNYQKLNKNIRLIFRTGSPNFSEKEQMLHDKINKSGHITSLPEVAFKREAHRLFSGLS FDKAIDFSGYSFYWSKFVAFSDSRVKMIFQHNDLYAEMTKEIDGKFPHKKLTGVFELY HYFDKVISISKALMTINSHKLSKYIEAEQLDYLPNLIFLGNDFVSEKKEEALFNLNGI YSFINSEIRIFQNPKVNSVFEVKSFSKNEIVKVLSTKKVQDIIFVKILVNDIYLGWVE FSELKFSGNETKKVVKVKKVASIVKKQNFLIYQNIPNFFPGEKDEAVTETKYVTQQYW FVNKVLFTKQGKVAYISNGLGIKGWVRYGALNRFHNLANKPYLALGFLIHNLRNKCLT SSKITFEKY" gene 948942..949673 /gene="yjeF" /locus_tag="L148651" /db_xref="GeneID:1114552" CDS 948942..949673 /gene="yjeF" /locus_tag="L148651" /note="surface polysaccharides, lipopolysaccharides and antigens" /codon_start=1 /transl_table=11 /product="lipopolysaccharide biosynthesis protein" /protein_id="NP_267078.1" /db_xref="GI:15672904" /db_xref="GeneID:1114552" /translation="MKFSKKLEAGFLNQSLDYSTDEQQMVKGTWWVKTYNNGKFVCWL KLADIELIDGISSINKNENSFDDIIQKIMSDKKDKIPQFVNVARLSPEKNQKVLIEAF AKLKTTGVEAKLYILGSGILKEELETKIIELNLSGSVQLLGHMENIRNFLSLMDYFIF PSLYEGQGMALLEAMSVGLLPIVSDIPTSREIVAGGNYGIISESNDEQGLALAMMKAL KKEEFSSFDLESYNQNVINRIKLIL" gene 949844..950833 /gene="yjeG" /locus_tag="L149469" /db_xref="GeneID:1114553" CDS 949844..950833 /gene="yjeG" /locus_tag="L149469" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_267079.1" /db_xref="GI:15672905" /db_xref="GeneID:1114553" /translation="MEKVLKSHRNNLGGLTLTIDNPSSIVFPQKVYKVTEGNLVINLV GSSGADIDFNNSIFYIGITGNFLIRMISGGESSNYETIKNASFYGSASNTEEGKGRFG LNALKAHNVHFEYLSFYDAQSMGYHLFDLAAVDNFIFNDLEVRGFGKAGLSSLDRDRL YKSNPHALYSEAIQVDSAYEGCFGTYGFSDSTNIIFNKEKKGLPKNADSKSKISTNIT LKNSYFGPYTGVIGQGKIDNERYMARQYFSATAIGSHSGTGTPKVTIMDNTFENTIYS ELTTTDSRLYPIHFRNPKLDFIYQSKNNFINQHGNSKKNGYLLNSRYVAWYKN" gene 950851..951291 /gene="tagD2" /locus_tag="L150584" /db_xref="GeneID:1114554" CDS 950851..951291 /gene="tagD2" /locus_tag="L150584" /EC_number="2.7.7.39" /note="surface polysaccharides, lipopolysaccharides and antigens" /codon_start=1 /transl_table=11 /product="glycerol-3-phosphate cytidyltransferase" /protein_id="NP_267080.1" /db_xref="GI:15672906" /db_xref="GeneID:1114554" /translation="MDKEKVVLVAGTFDILHESHVNMLRNAKNLGSKLIVMLSTDEFN AGKGKKAFQDYDTRKYVLESIRYVDLVVPEQSWDDKSLYIDMFDVDIFAMGDDWKGKF DFLKEEFPNLKIMYFPRGKVSSSNIKKEMGKLYSKKESSDNTTK" gene 951328..951759 /gene="yjfB" /locus_tag="L151067" /db_xref="GeneID:1114555" CDS 951328..951759 /gene="yjfB" /locus_tag="L151067" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="NP_267081.1" /db_xref="GI:15672907" /db_xref="GeneID:1114555" /translation="MSDLSLIFSKFSFLGNPTKLIKIFLQLENLIKKQKSNYPKPDVS DVLYVKVEDDIYRLHKKKFIKEVILPNGANVIILSKLALANSLKIVGKPGDGDLNQIL KALRKEKDLKKCQEIINEISDSFLTNLSIKELIKIIRKQMG" gene 951780..952967 /gene="tagF" /locus_tag="L151480" /db_xref="GeneID:1114556" CDS 951780..952967 /gene="tagF" /locus_tag="L151480" /note="surface polysaccharides, lipopolysaccharides and antigens" /codon_start=1 /transl_table=11 /product="teichoic acid biosynthesis protein F" /protein_id="NP_267082.1" /db_xref="GI:15672908" /db_xref="GeneID:1114556" /translation="MLNLLVKMRLLILRKMLSLFLLILGKFVKTDYKLVIFASFNGKA YSDNPRYLFEYLRDHEEFASYHFVWAFKVKRSVNRAKVVKFNSFSYYYLLSKAKYWVF NSKMAPYYHKKGEQVYLQTWHGTPLKRLGHDILDNGITYYRSRLSYQQMLRSYDEDSR HWDYLISPNPFSSQAFTSAFNLDRGKLLEVGYPRVDFLVNADSNKCMELKRRYGLPLD KKVVLYAPTWRDDSFGIRGYRFELAVDFYKWKNQLGDDTVILFKPHYLISNVYQIPND LSNFVYLMAASADINDAYLMSDVLITDYSSVFFDYANLNRPIYFYMYDFEQYEQELRG FYLNVPDELPNDVIRTEKELLRRIKEDIFDYDRLQVFNQVFNSWNDGKVSSKVAKRIF YEN" gene 952957..954072 /gene="tagB" /locus_tag="L152603" /db_xref="GeneID:1114557" CDS 952957..954072 /gene="tagB" /locus_tag="L152603" /note="surface polysaccharides, lipopolysaccharides and antigens" /codon_start=1 /transl_table=11 /product="teichoic acid biosynthesis protein B" /protein_id="NP_267083.1" /db_xref="GI:15672909" /db_xref="GeneID:1114557" /translation="MKTKSIILTIILGIFYPFSLILRVKKNRITFISLEHDNLSKDFK LIYDRLKKKDQYELRTVLFKFESSLWGNIKYGYACIRQLFLIESSRLVIIDYNNFVVS KFPHRKNVKVLQLWHATGALIKFGNDVERDYIVNHYDYTIVNSDFLKPIFARAFNVIE DQVFVTGIPNNDKIFDQNFVDLTCQRLVGKYPLLKGKKIITYAPTFRGRISTHFKEAL IDLEKIHQAIGNDYIVIYKSHPLIQHSNYEKNEHVLYIQDELISSLFCVTDILVTDYS