LOCUS NC_011992 3796573 bp DNA circular BCT 18-FEB-2010 DEFINITION Acidovorax ebreus TPSY, complete genome. ACCESSION NC_011992 VERSION NC_011992.1 GI:222109225 KEYWORDS . SOURCE Acidovorax ebreus TPSY ORGANISM Acidovorax ebreus TPSY Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax. REFERENCE 1 (bases 1 to 3796573) AUTHORS Byrne-Bailey,K.G., Weber,K.A., Chair,A.H., Bose,S., Knox,T., Spanbauer,T.L., Chertkov,O. and Coates,J.D. TITLE Completed Genome Sequence of the Anaerobic Iron-Oxidizing Bacterium Acidovorax ebreus Strain TPSY JOURNAL J. Bacteriol. 192 (5), 1475-1476 (2010) PUBMED 20023012 REFERENCE 2 (bases 1 to 3796573) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (28-JAN-2009) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 3796573) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Chertkov,O., Brettin,T., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Mikhailova,N. and Coates,J.D. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (22-JAN-2009) US DOE Joint Genome Institute, 2800 Mitchell Drive B310, Walnut Creek, CA 94598-1698, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP001392. URL -- http://www.jgi.doe.gov JGI Project ID: 4084098 Source DNA and bacteria available from John D. Coates (jcoates@nature.berkeley.edu) Contacts: John D. Coates (jcoates@nature.berkeley.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Meta information: Organism display name: Diaphorobacter sp TPSY GOLD ID: Gi02057 http://genomesonline.org/GOLD_CARDS/Gi02057.html Sequencing Status: Complete Phenotypes: Iron oxidizer, Uranium oxidizer Diseases: None Habitat: Fresh water Oxygen Requirement: Facultative Cell Shape: Rod-shaped Motility: Motile Temperature Range: Mesophile Biotic Relationship: Free living. COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..3796573 /organism="Acidovorax ebreus TPSY" /mol_type="genomic DNA" /strain="TPSY" /db_xref="taxon:535289" gene 70..1491 /locus_tag="Dtpsy_0001" /db_xref="GeneID:7384672" CDS 70..1491 /locus_tag="Dtpsy_0001" /note="KEGG: ajs:Ajs_4144 chromosomal replication initiator protein DnaA; TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA domain; Chromosomal replication initiator DnaA; SMART: AAA ATPase; Chromosomal replication initiator DnaA domain" /codon_start=1 /inference="protein motif:TFAM:TIGR00362" /transl_table=11 /product="chromosomal replication initiator protein DnaA" /protein_id="YP_002551490.1" /db_xref="InterPro:IPR001957" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR013159" /db_xref="InterPro:IPR013317" /db_xref="GI:222109226" /db_xref="GeneID:7384672" /translation="MNEGLHSSSHDSDGASAGQGLWQACAEQLAQDLPEQQFNTWIKP LVAQVAPDFSKVTLLVANRFKLDWIRAQYAGRISALLEGLYGQPVTLELALAQRESVV RTYVRPTAPETPATGDAPSAHPTADEAPAGAFRTRLNPALTFETLVEGTANRMARSAA MHVAGSPGHLYNPLFIYGGVGLGKTHLVHAVGNKLLQDRPDAKVLYIHAEQFVSDVVK SYQRRTFDDFKERYHSLDLLLIDDVQFFANKDRTQEEFFNAFEALLAKKSHIVMTSDT YPKGLANIHERLVSRFDSGLTVAIEPPELEMRVAILINKARAEGSEMPEEVAFFVAKN VRSNVRELEGALRKILAYSRFNQKEVSIQLAREALRDLLSIQNRQISVENIQKTVADY YKIKVADMYSKKRPASIARPRQIAMYLAKELTQKSLPEIGELFGGRDHTTVLHAVRKI GAERQQLTELNQQLHVLEQTLKG" gene 1636..2742 /locus_tag="Dtpsy_0002" /db_xref="GeneID:7382693" CDS 1636..2742 /locus_tag="Dtpsy_0002" /EC_number="2.7.7.7" /note="KEGG: ajs:Ajs_4145 DNA polymerase III, beta subunit; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta chain; SMART: DNA polymerase III beta chain" /codon_start=1 /inference="protein motif:TFAM:TIGR00663" /transl_table=11 /product="DNA polymerase III, beta subunit" /protein_id="YP_002551491.1" /db_xref="InterPro:IPR001001" /db_xref="GI:222109227" /db_xref="GeneID:7382693" /translation="MIVLKATQDKVLAVLQSVAGIVERRHTLPILANVLLRKTGNAIQ LTTSDLEIQIRTTAELGGDTGDFTTTVGARKLIDILKTMPADQTVSLESNQSKLILKG GKSRFTLQTLPAEDFPLVQEAASFGPAFSVPQKVLKSLLGQVSFAMAVQDIRYYLNGI LFVAEGTTLSLVATDGHRLAFASAQLDVEVPKQEVILPRKTVLELQRLLSDADGAIEM QFANNQAKFSFGGMEFVTKLVEGKFPDYNRVIPKNHHNSVTLGRAPLLASLQRTAIMT SDKFKGVRLNIEPGLLRVASNNAEQEEAVDELDIDYGGDAIEIGFNVSYLIDALANMG QDMVKVDLADGNSSALMTIPDNEHFKYVVMPMRI" gene 2860..5466 /locus_tag="Dtpsy_0003" /db_xref="GeneID:7382694" CDS 2860..5466 /locus_tag="Dtpsy_0003" /note="KEGG: ajs:Ajs_4146 DNA gyrase subunit B; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA gyrase subunit B domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA topoisomerase type IIA subunit B region 2 domain protein; SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein" /codon_start=1 /inference="protein motif:TFAM:TIGR01059" /transl_table=11 /product="DNA gyrase, B subunit" /protein_id="YP_002551492.1" /db_xref="InterPro:IPR000565" /db_xref="InterPro:IPR001241" /db_xref="InterPro:IPR002288" /db_xref="InterPro:IPR003594" /db_xref="InterPro:IPR006171" /db_xref="InterPro:IPR011557" /db_xref="InterPro:IPR013506" /db_xref="GI:222109228" /db_xref="GeneID:7382694" /translation="MTAEQSQPAPEQPISAPAEQPVASVAGSDGYGEGAIQILEGLEA VRKRPGMYIGDTSDGTGLHHLVFEVVDNSIDEALAGHCDDIVVTIHTDNSISVVDNGR GIPTGVKMDDKHEPKRSAAEIALTELHAGGKFNQNSYKVSGGLHGVGVSCVNALSKKL RLTVRRDGQTHQLEFSKGVVQNRLIEIVDGFEVSPMKVIGPSEKRGTEVRFLPDTEIF KENSDFHYEILAKRLRELSFLNNGVRIRLIDERTGKEDDFSGAGGVKGFVEFINGTKK VLHPTAFHATGARPAETYGGIPGTEIGVEVAMQWNDGYNEQVLCFTNNIPQRDGGTHL TGLRAAMTRVIGKYIEQNELAKKAKVEVSGDDMREGLCCVLSVKVPEPKFSSQTKDKL VSSEVRAPVEDIVAKALTDYLEEKPNDAKILCGKIVEAARAREAARKAREMTRRKGVL DGMGLPGKLADCQEKDPALCEIYIVEGDSAGGSAKQGRDRKFQAILPLRGKILNVEKA RYEKLLSSNEIVTLITALGTGIGKAAVESGKSGADDFDVAKLRYHRIIIMTDADVDGA HIRTLLLTFFYRQMPELVERGHIYIAQPPLYKVKNGKEELYLKDAAALDTFLLRVALN HASITTSGDQPRTLAGDDLAQLARTHQHAEQVIARLSAFMDAEALRAVADGVVFNLDT LQDAEASAVQLQAKLRELNTNGVPADVAGEIDPRTDKPILRISRHHHGNIKSSLITQD FVAGDDYAALAQAAESFRGLIQEGAKVTRGEGEKAKEEKVGDFRQAMAWLISEAERTT SRQRYKGLGEMNPEQLWETTMDPEVRRLLRVQIDDAIEADRVFTMLMGDEVEPRRDFI ETNALRAGNIDV" gene complement(5621..5854) /locus_tag="Dtpsy_0004" /db_xref="GeneID:7382695" CDS complement(5621..5854) /locus_tag="Dtpsy_0004" /note="KEGG: ajs:Ajs_4147 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_4147" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551493.1" /db_xref="GI:222109229" /db_xref="GeneID:7382695" /translation="MIDWVPVVFITFKVLVFGTCMFFAIKWHYDQGNKGTDKRALLRT SGKVVAVFMAALLAVLLFTFGLSKMLGMDLRLP" gene 6024..6545 /locus_tag="Dtpsy_0005" /db_xref="GeneID:7382696" CDS 6024..6545 /locus_tag="Dtpsy_0005" /note="PFAM: GCN5-related N-acetyltransferase; KEGG: ajs:Ajs_4148 GCN5-related N-acetyltransferase" /codon_start=1 /inference="protein motif:PFAM:PF00583" /transl_table=11 /product="GCN5-related N-acetyltransferase" /protein_id="YP_002551494.1" /db_xref="InterPro:IPR000182" /db_xref="GI:222109230" /db_xref="GeneID:7382696" /translation="MTVLTIRPATIDDTDLILHFVRELAIYEKAEHEALATPAHVHRT LFCANPKVHGLICEAGGTAVGFAVYFFNYSTWQGRHGLYLEDLYVSPEHRGKGAGMAL LRQLARIAVDHDCGRFEWSVLDWNTPSIALYDSLGARPQSEWIRYRLTGDELHALAAQ ARPLAPQPCTPAP" gene 6542..6955 /locus_tag="Dtpsy_0006" /db_xref="GeneID:7382697" CDS 6542..6955 /locus_tag="Dtpsy_0006" /note="PFAM: protein of unknown function UPF0153; KEGG: ajs:Ajs_4149 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF03692" /transl_table=11 /product="protein of unknown function UPF0153" /protein_id="YP_002551495.1" /db_xref="InterPro:IPR005358" /db_xref="GI:222109231" /db_xref="GeneID:7382697" /translation="MRSPIAIVDVDRVDTWTRYRAGLCESCAANCCTMPLEVQLSDLV RLGLVDAFEAEHEEPRHIAKRLQKARLIDHFNHKNTLFTLARRANGDCQFLDAATRLC TVYEQRPETCRLHPQKKSPKPGYCAYGARERQRRG" gene 7062..7499 /locus_tag="Dtpsy_0007" /db_xref="GeneID:7382698" CDS 7062..7499 /locus_tag="Dtpsy_0007" /note="TIGRFAM: OsmC family protein; PFAM: OsmC family protein; KEGG: ajs:Ajs_4150 OsmC family protein" /codon_start=1 /inference="protein motif:TFAM:TIGR03562" /transl_table=11 /product="OsmC family protein" /protein_id="YP_002551496.1" /db_xref="InterPro:IPR003718" /db_xref="GI:222109232" /db_xref="GeneID:7382698" /translation="MSEKKASVHWEGGGKAGQGQISTETEALQKYPYGFASRFGDDRK GTNPEEILGAAHAACFTMAFSFAADKAGFATERVDTTASVRLTQQGEGFLIDRIALTL KAKVPGMDEATFQKLAADAKANCPLSKALAAVPEITLSATLVQ" gene 7511..8275 /locus_tag="Dtpsy_0008" /db_xref="GeneID:7382699" CDS 7511..8275 /locus_tag="Dtpsy_0008" /note="PFAM: protein of unknown function DUF72; KEGG: ajs:Ajs_4151 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF01904" /transl_table=11 /product="protein of unknown function DUF72" /protein_id="YP_002551497.1" /db_xref="InterPro:IPR002763" /db_xref="GI:222109233" /db_xref="GeneID:7382699" /translation="MDTATGRPHIRVGISGWTFAPWRGSFYPPGLAQAKELHYASRQL TAIEVNGTFYSTFRPATFAKWHDETPDGFMFSLKAHRLVTHRRVLATAGDAIARFVGS GIAQLQGKLGPIVWQFMPSKRFEEADFEAFLALLPREVDGRRLRHALDVRHESFATPA FIALARRYGCVPVCTDSEKFPAMADPEADFAYLRLMRSQAGIPTGYTPEAIAQWAAGV RAWAGGERPRDVFVYFINGAKERAPAGALELLRQLA" gene complement(8362..8655) /locus_tag="Dtpsy_0009" /db_xref="GeneID:7382700" CDS complement(8362..8655) /locus_tag="Dtpsy_0009" /note="PFAM: acylphosphatase; KEGG: ajs:Ajs_4152 acylphosphatase" /codon_start=1 /inference="protein motif:PFAM:PF00708" /transl_table=11 /product="acylphosphatase" /protein_id="YP_002551498.1" /db_xref="InterPro:IPR001792" /db_xref="GI:222109234" /db_xref="GeneID:7382700" /translation="MAESAASITRHLRIHGLVQGVYYRKSMTEAARRLGVQGWVRNRQ DGTVEALASGAAPAVQALIDWAHEGPPAARVERVEVAQAPACDAQGFEQRETV" gene 8696..8929 /locus_tag="Dtpsy_0010" /db_xref="GeneID:7382701" CDS 8696..8929 /locus_tag="Dtpsy_0010" /note="PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ajs:Ajs_4153 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein" /codon_start=1 /inference="protein motif:PFAM:PF00037" /transl_table=11 /product="4Fe-4S ferredoxin iron-sulfur binding domain protein" /protein_id="YP_002551499.1" /db_xref="InterPro:IPR001450" /db_xref="InterPro:IPR017900" /db_xref="GI:222109235" /db_xref="GeneID:7382701" /translation="MTAPRKALPAIDPQRCTGCGWCVGVCPPHVLSLQMQGPERFGPK RSVLHDAPGCTGCALCALRCPFDAIRMVRNSTQ" gene 8991..10586 /locus_tag="Dtpsy_0011" /db_xref="GeneID:7382702" CDS 8991..10586 /locus_tag="Dtpsy_0011" /EC_number="2.3.2.2" /note="PFAM: gamma-glutamyltranspeptidase; KEGG: ajs:Ajs_4154 gamma-glutamyltransferase 2" /codon_start=1 /inference="protein motif:PRIAM:2.3.2.2" /transl_table=11 /product="Gamma-glutamyltransferase" /protein_id="YP_002551500.1" /db_xref="InterPro:IPR000101" /db_xref="GI:222109236" /db_xref="GeneID:7382702" /translation="MTWQLPYPSGRQPVLARNVVSTSQPLAAQAGAAAFARGGNAIDA ALAAAITLTVVEPVMNGIGGDAFALVWDGAALHGLNASGRAPRAWSAERFAHLPQMPR IGWDTVTTPGGVAGWVALSERFGALPFEDLFADAIRHARDGFPVSPVIARQWAQAAID LKGQPGFEAFTPGGRAPQAGEIWRFADQADTLADIARTRGASFYRGRLAQAMADYARQ HGAGLALEDLAAHAVEWVQSISVPFGDRTVHEIPPNGQGIAALMALGLLEHLPYRSTA AGSAARMHLEIEAMRVAFADLYAHVADPDHMRLTSAQLLDPAYLRQRAALIDPQRAGQ YPAGQPGSGGTVYLCTADSEGRMVSFIQSNFKGFGSGVVVPGTGIALHNRGMGFVTTP GHPNQVAGGKRPMHSIIPAFVTRGGQPHMAFGVMGGNMQAQGHVQMVLREAVEGLNPQ ACSDAPRWRINDAGALTLEHTVPAAVVEGLRALGHDPQVAAPGSLEFGSAQIIRRLEA TPGTGFAYAAGSDHRRDGQAVGC" gene 10940..12358 /locus_tag="Dtpsy_0012" /db_xref="GeneID:7382703" CDS 10940..12358 /locus_tag="Dtpsy_0012" /EC_number="1.1.1.3" /note="PFAM: oxidoreductase domain protein; homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; KEGG: ajs:Ajs_4155 homoserine dehydrogenase" /codon_start=1 /inference="protein motif:PRIAM:1.1.1.3" /transl_table=11 /product="Homoserine dehydrogenase" /protein_id="YP_002551501.1" /db_xref="InterPro:IPR000683" /db_xref="InterPro:IPR001342" /db_xref="InterPro:IPR005106" /db_xref="GI:222109237" /db_xref="GeneID:7382703" /translation="MFVEPQFSPSPEVHASARRAPAPPPALRVGMIGTGTVGSGVWRV LRRNRDLINARAGRAIEIVAVAARNTARAATALDGAPGVRLLTDPLQLAADPGVDVVL ELAGGTGAARDWVQAALAHGKHVVTANKALLATHGEALAQTAARHGRVLAYEAAVAGS VPVIKALREGLAANRITALAGVLNGTSNYILTRMQAAGLGFAAALTEAQALGYAEADP AFDVDGTDAAHKLALLAANAFGMPVRLDAVHVEGIRDLQRGDVAAAAHLGYAVKLLAV AEQQECEGRMAIQLRVHPALVPARHPLALLDGATNGLLVRGDAAGSAFFSGAGAGGEP TASAVLADLIDLARLPAVSSPTPTGPGVPTLGTHRRAGDDPAVLPMAPVKTPHLLRLL PGAALCETAVLRALAREGVRVRRRTWAAPVTPGGAPELLLLTAPTPDALAAEATAHLQ AYTGAQVRRLRVELCSALTDEQ" gene complement(12411..12719) /locus_tag="Dtpsy_0013" /db_xref="GeneID:7382704" CDS complement(12411..12719) /locus_tag="Dtpsy_0013" /note="KEGG: ajs:Ajs_4156 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_4156" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551502.1" /db_xref="GI:222109238" /db_xref="GeneID:7382704" /translation="MPSHRDTPSPSNAPGAAPPSPGEHTDVHEQGVDLQTPPQQERAA ATPAAPKLPHERDQSVTMTGGERHPEVEQAHRDVERGLQDTDRGPPADRTYRKLKDSE " gene 12968..15157 /locus_tag="Dtpsy_0014" /db_xref="GeneID:7382705" CDS 12968..15157 /locus_tag="Dtpsy_0014" /note="SMART: helicase c2; DEAD-like helicases; KEGG: ajs:Ajs_4158 ATP-dependent DNA helicase DinG" /codon_start=1 /inference="protein motif:SMART:SM00491" /transl_table=11 /product="helicase c2" /protein_id="YP_002551503.1" /db_xref="InterPro:IPR006555" /db_xref="InterPro:IPR014001" /db_xref="InterPro:IPR014013" /db_xref="GI:222109239" /db_xref="GeneID:7382705" /translation="MSSTEWAAQALQSFEAVVQSTAGFRVREGQRRMAEQVAQTFSQA QLGKLEDDDALPQRAIAVVQAGTGVGKSLAYSVPAIAMALARGTRVLISTATVALQEQ LVHKDLPALAARMELPFQFALAKGRGRYVCKLKLERLAGGGAAGPGGDGDLPDDDLFA DEEAEQRGKRPRHESEARMKFYASMADALATSEWDGDRDTLATPPEPEAWSPVAAEAS SCTGKHCPVFNQCTYYERRKQLVAAQVIVANHDLLLSSLGARLLPELDNCLLVIDEAH HLPATALDQFACEADLSRLTWIDRLASRALRIGQLVEVEEIADIPNHAARLRAALQDA ARLVMDVYGEQLRAPVPGRRQFASSLPTRARVAGGVLPEALVEPFSQAAHHAEGFLNA LRAISKALRSEMRDKPDEARRLSQLYAQIGVLAPRLEAVHAAAQLLLQDAPEGAVPAA KWFTLEVEGDFIVVRAHASPVLPGNTLRNHLWSAVRGAVLTSATLTSCGQFDFFLRES GLFGDEAVTTLAVPSPFDYALQGTLVATETRAEPRDAQAFTAEMVDALLSDLALVEAG ALVLFTSREQMRQAVDMLPTAMRSAVLVQNTLPRPQLLARHRERVAEGLPSIIFGMQS FGEGLDLPGRLCESLFITKLPFAPPDDPVGEARAEWLRGAGRDPFSELVVPATAIRLA QWVGRAIRTEEDRAHVYCYDKRLVRTGYGQRLLQGLPPFTLARRAAG" gene 15342..15539 /locus_tag="Dtpsy_0015" /db_xref="GeneID:7382706" CDS 15342..15539 /locus_tag="Dtpsy_0015" /note="KEGG: ajs:Ajs_4159 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_4159" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551504.1" /db_xref="GI:222109240" /db_xref="GeneID:7382706" /translation="MKRTNDNSGATDKVANDHNQQGHQPPTALNQARRTPDSRSDRTD QVGSGNQAQSRRGSKNQGGAG" gene 15687..16343 /locus_tag="Dtpsy_0016" /db_xref="GeneID:7382707" CDS 15687..16343 /locus_tag="Dtpsy_0016" /EC_number="2.7.7.7" /note="KEGG: ajs:Ajs_4160 DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease" /codon_start=1 /inference="protein motif:PRIAM:2.7.7.7" /transl_table=11 /product="DNA-directed DNA polymerase" /protein_id="YP_002551505.1" /db_xref="InterPro:IPR006055" /db_xref="InterPro:IPR013520" /db_xref="GI:222109241" /db_xref="GeneID:7382707" /translation="MPSAPIAVIDFETTGMMPAQGARATEVAIVLMEGGRVVDRYQSL MRTGVRIPPFITQLTGITNAMVEAAPDAAAVMREAARFVGDAPMVAHNAAFDRKFWQA EMQHAGLAAPHPFACTVLLSRRVYPDAPSHSLGRLTDHLGLPRAGRAHRALADAEMAA ALLACMQRDLCQRFGLAWPDHALLMQLQRCARPAIGKLLQRHRQAAPAEQPPTALQMG " gene 16551..17057 /locus_tag="Dtpsy_0017" /db_xref="GeneID:7382708" CDS 16551..17057 /locus_tag="Dtpsy_0017" /note="PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: ajs:Ajs_4161 pyridoxamine 5'-phosphate oxidase-related, FMN-binding" /codon_start=1 /inference="protein motif:PFAM:PF01243" /transl_table=11 /product="pyridoxamine 5'-phosphate oxidase-related FMN-binding" /protein_id="YP_002551506.1" /db_xref="InterPro:IPR011576" /db_xref="GI:222109242" /db_xref="GeneID:7382708" /translation="MSMPDDSPHATLWNRIKDIRFAMLAHRAADGRLHAHPLTTLNKD IDAQSQLFFFIPRGSELHSRLQADSQVHLSYADPGEDCYVSLSGTAGFIEDPARKEAL WTPLAKAWFPDGPTDPNLVLLAVRIEHAEYWDVKDSKLSQLYQLATAALTGEQPKPLG EHRELSLD" gene complement(17352..18680) /locus_tag="Dtpsy_0018" /db_xref="GeneID:7382709" CDS complement(17352..18680) /locus_tag="Dtpsy_0018" /note="PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: ajs:Ajs_4162 GntR family transcriptional regulator" /codon_start=1 /inference="protein motif:PFAM:PF00392" /transl_table=11 /product="transcriptional regulator, GntR family with aminotransferase domain" /protein_id="YP_002551507.1" /db_xref="InterPro:IPR000524" /db_xref="InterPro:IPR004839" /db_xref="GI:222109243" /db_xref="GeneID:7382709" /translation="MPSLSVEGSNAKDIAASLEYAMRRGALPSGAALPSVRHLAAELG VNPNTVAAAYARLRSAGRVVTAGRRGTRVEGEPPRPAPSFAPPEGLRDLACGQPDPAL LPRPRGAAWAAALGQPAAVPHAPQAVAEALLSQARPWLESQGLPGDAVGVFSGALDAI ERALRQHARPGDRVAVEDPGWPPLLALLHSLRLQPVPLAVDAQGLCVPAAGVLAQCCA VVVTPRAHNPTGVALGAARWKALRRRLRAHPHTLLILDDHWGLLSHAPLAMAGALPPL WLHVLSVSKALGADCRVALAAGTPALVQGMCAHQALGPRWVSHWLQGLVAQLWRQAAQ GRARGSWRHAAAQYAARRAALADALRGHGVAAPWLEGEGLHAWVPVPDEAAAVQALAA AGWAVQAGAPLRLHSGPGVRISLGAVGVRDMGRLARDLAGALRPAVRAVF" gene 18899..19381 /locus_tag="Dtpsy_0019" /db_xref="GeneID:7382710" CDS 18899..19381 /locus_tag="Dtpsy_0019" /note="PFAM: NLP/P60 protein; KEGG: ajs:Ajs_0001 NLP/P60 protein" /codon_start=1 /inference="protein motif:PFAM:PF00877" /transl_table=11 /product="NLP/P60 protein" /protein_id="YP_002551508.1" /db_xref="InterPro:IPR000064" /db_xref="GI:222109244" /db_xref="GeneID:7382710" /translation="MRAFALPVLTLAASLLVVGCGTTPPTSASRNAAYSRLSPEQSSD IAIHALGLVGTPYRYGGNTPDSGFDCSGLIGYVYTSRAGVAPPRTVAQLSGFGQSIDA DELRTGDLVVFGRGRPTHAGIYVGEGRFVHAPSSGGTVRLDHLKSRYWSQQFASFRRP " sig_peptide 18899..18985 /locus_tag="Dtpsy_0019" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.994) with cleavage site probability 0.407 at residue 29" gene 19509..20609 /locus_tag="Dtpsy_0020" /db_xref="GeneID:7382711" CDS 19509..20609 /locus_tag="Dtpsy_0020" /EC_number="2.5.1.54" /note="KEGG: ajs:Ajs_0002 phospho-2-dehydro-3-deoxyheptonate aldolase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA" /codon_start=1 /inference="protein motif:TFAM:TIGR00034" /transl_table=11 /product="phospho-2-dehydro-3-deoxyheptonate aldolase" /protein_id="YP_002551509.1" /db_xref="InterPro:IPR006218" /db_xref="InterPro:IPR006219" /db_xref="GI:222109245" /db_xref="GeneID:7382711" /translation="MTLTERLASPLTTHDTTRIDDLRIKAVRPLITPALLQEWQPAPE AAQTLVESSRVAISRVLHGQDDRLIVVVGPCSIHDHDQAMEYARLLKEQADALAQDLL IVMRVYFEKPRTTVGWKGYINDPHLDGSFAINEGLERARALLLDVLALGLPVGTEFLD LLSPQFISDLVSWGAIGARTTESQSHRQLASGLSCPVGFKNGTDGGVKVAADAIQAAQ APHAFMGMTKMGQAAIFETRGNHDCHVILRGGKAPNYGAADVQAACEMLGKAGQRPQV MIDLSHANSSKQHRRQIDVAQDVAQQIAAGDARITGVMIESHLQEGRQDIVDGQPLTP GVSVTDACISFAQTVPVLHQLAAAVRERRTRG" gene 20851..24528 /locus_tag="Dtpsy_0021" /db_xref="GeneID:7382712" CDS 20851..24528 /locus_tag="Dtpsy_0021" /note="KEGG: aav:Aave_0022 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; GGDEF domain containing protein; EAL domain protein; GAF domain protein" /codon_start=1 /inference="protein motif:TFAM:TIGR00254" /transl_table=11 /product="diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)" /protein_id="YP_002551510.1" /db_xref="InterPro:IPR000014" /db_xref="InterPro:IPR000160" /db_xref="InterPro:IPR001633" /db_xref="InterPro:IPR003018" /db_xref="InterPro:IPR013655" /db_xref="InterPro:IPR013656" /db_xref="InterPro:IPR013767" /db_xref="GI:222109246" /db_xref="GeneID:7382712" /translation="MPISDSTGTPSAHPAEAGGPAAAVQAHDEAAAHALLLQLQQLIT DLQLPLEHVLAQAAQAACAITGAVGAMIALRENDALAVRASVGAPPLPAIGTRVPLDA CASWQGMEQAARAGLQAATGAPAQDVGSAQPPHRRVSMPLGSGALLAGLLQVRVPQGA ALDAQHLLHLRILAESLGAMLQLRRVDAQLRASEQQYRTLFAEHPQPMWVCDRDSLRL LAVNHAMVRHYGHAEQELLGMELRALWSAENQDAATCALDMLRREAHAPGSPASAPRL WRHARKDGAALDVEVVVGDTDFGGRPAWQMLASDVTERCRIEDELARVNRAKRMRGAC SETLVRATSESDLLHGVAVEIGGYRMGWVGMARDDAHRRIEPVAHAGVAQAHDYTEHL HLSWSVQEPGGNGPAGVCVRSGRTVIVHDVHHSPAFSHLADRMAQLGFHAVVCLPLRN AERTFGLLYLYAPEVLHLGVQETQLLEAMAADLAFGIENLRARAEQQRLQATLVKVAT AVSAGVGAAFFDHLAQHMAEALGAQVACVGRFLPAAPGQARRAVALSHVVDGVTQPNA EYVLEGTPSERLLTQRSLVIRDRARERFPRAPVLARTGARSYVGQQLTASDGTPIGMI FVVFRQALERSRFVSNTLQIFAARAAAELQRQTDDQRIRQQASLLDKARDAIIVRDLE HRITFWNEGAERMYGWSREEVLGRSIATLLYQNPEDFLRATQHVMQHGVWSGEILQCD RAGRTLEAEGRWTLVRNDRGEPESVLAINADIGTRKHQEREIQRLAFFDPLTHLPNRV QLLDRVDQALAKAQRLEQGGALLFIDLDNFKTLNDTLGHDQGDELLQIVAQRLNTCVR SADTVARLGGDEFVVLVEQLSAHSDTLAEQAGAVGEKILAVLSAPYALTGYQYRSTPS IGIALFNHAPTTVGELLKQADLAMYQAKTAGRNTLRFFNPSMQHAVAERASLEADLRN ALAQKEFLLHYQPQINARGAIVGVEALLRWAHPRRGMVSPGRFIPLAEETGLVLPLGH WVLHTACSVLADWQRVPALAPLTMAVNVSSRQFRDAGFVDDVAGVLAATGAPAAQLKL ELTESLLVEDLAATIATMAALRALGVGFSLDDFGTGYSSLAYLKRMPLGQLKIDQSFV RDLLTDPNDAAIVRTIIGLAASLGLEVIAEGVETSAQRDWLAHAGCAVYQGYFFSRPL PLDLLEQLLHDHIAAARTPPL" gene complement(24586..25389) /locus_tag="Dtpsy_0022" /db_xref="GeneID:7382713" CDS complement(24586..25389) /locus_tag="Dtpsy_0022" /note="PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: ajs:Ajs_0004 regulatory proteins, IclR" /codon_start=1 /inference="protein motif:PFAM:PF09339" /transl_table=11 /product="transcriptional regulator, IclR family" /protein_id="YP_002551511.1" /db_xref="InterPro:IPR005471" /db_xref="InterPro:IPR014757" /db_xref="GI:222109247" /db_xref="GeneID:7382713" /translation="MARTRNIDFDEGADSRRFVTALARGLDVLACFQVDEKWLTNAEI AARTGLPKPTVVRLAYTLCVLGYLRHSRDSGKYALGDSLAALGITMVSNLRLRRIARP YMQDFADRYDISVSLGIRNGLSVLYVENCRSGTPLSLGLDLGARLPVAETAMGHALLA VMEPRERERLLAEIRQAEGERWPQLRQAIETGCAHWRARGFTVVVRDWQTDIAGVGAA IRQPDGRVISFNAGGSASKFPRALLEQEIGPQFARMVKGLEPFVRSEEA" gene 25632..26603 /locus_tag="Dtpsy_0023" /db_xref="GeneID:7382714" CDS 25632..26603 /locus_tag="Dtpsy_0023" /note="PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0005 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF03401" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551512.1" /db_xref="InterPro:IPR005064" /db_xref="GI:222109248" /db_xref="GeneID:7382714" /translation="MTHALLNRRTLSLLLAAGCVAGPALAQPERFPSRPIKVLIGFTA GGSTDVPFRVLAENASKILGQPVIIENKPGAGGVLPAQMMQSTPADGYTLAQVPLPVF RLPYTQKINWNPATDLQYVIGLAGYAFGLVVPADSPIKSMQDYIAYAKDNPGKLNYGT PGALTTLHLTMENIALQAGVTLNHIPYKGNSESLQAVLGGHVMSIADTPGWAPYVEQG KLRVLSVWGDKRSARFPNVPTLKEVGINLVQTSPFGLVVPKGTDPKIAQVLHDAFKKA MEMPNYKESLAKFDMDTYYMDSATYKQYALDTMKTEKVIIEKLGLAK" sig_peptide 25632..25712 /locus_tag="Dtpsy_0023" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 1.000 at residue 27" gene complement(26942..27547) /locus_tag="Dtpsy_0024" /db_xref="GeneID:7382715" CDS complement(26942..27547) /locus_tag="Dtpsy_0024" /note="KEGG: ajs:Ajs_0006 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0006" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551513.1" /db_xref="GI:222109249" /db_xref="GeneID:7382715" /translation="MPTIARRSAFFRRTALLSPAPFLAAAAACLTAPPALAQPSEDRA YAPSVYVQGEWARRQTDAITIGATLPWGTWRRPLWGGELRGHWDVSLSRWSFDGIGGH NSAVVVGVAPTLRLRPDEGRSLWFWEAGIGATVASHRYRVQDHEFSTRFNFASHLGLG RNFGAQRQHELMLSVQHVSNAGIKSPNPGENFLQLRYALHF" sig_peptide complement(27434..27547) /locus_tag="Dtpsy_0024" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.999 at residue 38" gene complement(27674..28303) /locus_tag="Dtpsy_0025" /db_xref="GeneID:7382716" CDS complement(27674..28303) /locus_tag="Dtpsy_0025" /note="PFAM: protein of unknown function DUF1520; KEGG: ajs:Ajs_0007 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF07480" /transl_table=11 /product="protein of unknown function DUF1520" /protein_id="YP_002551514.1" /db_xref="InterPro:IPR011085" /db_xref="GI:222109250" /db_xref="GeneID:7382716" /translation="MARFKITQRLAATAVAAAVLAGMAVPTLAQPGPGPAATEQGASQ AQQRPRQRALTPEQREQYLAQRAEAFKRKLQLTPEQEPAWNSFLQSMKPDADARKARL DWQGMDQLTTPERIDRMRALRSQRAAEMDRRGDAVKAFYGTLTPAQQKTFDAEGKRMY RHWGGDHPMGKRWGKDGARGDFRGDGRGMRHQGPGPGAGAAPGAPLTPQ" sig_peptide complement(28214..28303) /locus_tag="Dtpsy_0025" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.998 at residue 30" gene 28616..29593 /locus_tag="Dtpsy_0026" /db_xref="GeneID:7382717" CDS 28616..29593 /locus_tag="Dtpsy_0026" /note="PFAM: putative exonuclease RdgC; KEGG: ajs:Ajs_0008 recombination associated protein" /codon_start=1 /inference="protein motif:PFAM:PF04381" /transl_table=11 /product="putative exonuclease RdgC" /protein_id="YP_002551515.1" /db_xref="InterPro:IPR007476" /db_xref="GI:222109251" /db_xref="GeneID:7382717" /translation="MFKNMIVYRIAPEWQVELTQLEEALAKAPFQECGATQEKSSGWV PPRGEAHGLLAESVGGHWMLRFQWEAKMLPATVLARKVKEKAAQIEQQTGRKPGKKET KELKEEAKLDLLPMAFTKQGGTWVWIDPQAHLLVLDTGAQGRADEVVSLLVEHLPGLS LALLDTQTSPQAAMALWLKEQEPPAGFSIDRECELKAPDETKAVVRYARHPLDIEEVQ GHIEAGKLPTKLAMSWDDRVSFVLTEGLQLKKVAFLDTVFEGQAQDEGGFDADVAIAT GELSQLIPDLIAALGGEGRTSLGGAAAAPAPTAGALHAAASGPDDDAPF" gene complement(29663..31015) /locus_tag="Dtpsy_0027" /db_xref="GeneID:7382718" CDS complement(29663..31015) /locus_tag="Dtpsy_0027" /note="PFAM: sodium:dicarboxylate symporter; KEGG: ajs:Ajs_0009 sodium:dicarboxylate symporter" /codon_start=1 /inference="protein motif:PFAM:PF00375" /transl_table=11 /product="sodium:dicarboxylate symporter" /protein_id="YP_002551516.1" /db_xref="InterPro:IPR001991" /db_xref="GI:222109252" /db_xref="GeneID:7382718" /translation="MHAISSAAPAPSVRLPFYRQLYFQVVFAIIIGVLLGHFQPEYGA AMKPFGDAFIKLIKMIIAPVIFLTIVTGIASMSHLSAVGRVFGKAMAYFLTFSTLALV VGLVVANVMQPGTGMHINVAELDQTAVKGYVSKSHEMTLTGFALDIIPKTLISPFVGD NILQVLLVAVLFGVSLAMVGDAGKPILDFLDGLTKPVFKLVNIVMKAAPIGAFGAMAF TIGKFGLGSLVNLAELVLTFYITSAVFVLVVLGAVARACGFSVLKLIRYLKAELLLVL GTSSSESALPSLMEKMEKAGCSKSVVGLVVPTGYSFNLDGTNIYMTLAALFIAQATDT HLTLGHQIALLLVAMLSSKGAAGVTGAGFITLAATLAVVPEVPVAGMALILGVDRFMS ECRSLTNFIGNAVATVVVSRWENALDADRLHRVLDGEAEFLPEPERAVEPVVLARHRA " gene 31185..33839 /locus_tag="Dtpsy_0028" /db_xref="GeneID:7382719" CDS 31185..33839 /locus_tag="Dtpsy_0028" /note="PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ajs:Ajs_0010 multi-sensor hybrid histidine kinase" /codon_start=1 /inference="protein motif:PFAM:PF02518" /transl_table=11 /product="PAS/PAC sensor hybrid histidine kinase" /protein_id="YP_002551517.1" /db_xref="InterPro:IPR001789" /db_xref="InterPro:IPR002114" /db_xref="InterPro:IPR003594" /db_xref="InterPro:IPR003661" /db_xref="InterPro:IPR004358" /db_xref="InterPro:IPR005467" /db_xref="InterPro:IPR013656" /db_xref="GI:222109253" /db_xref="GeneID:7382719" /translation="MPLRRRRPLITALVALFVLAGMAVCMLLASQYAQRRALHDESQG VRRQLTLYGQALEQRIDRFRTLPEVLALDAQLRDALTHPLTPAEVDALNRKLEQANGA SHSSTLTLINLQGRAIAASNWRDTPNNVGEDYHFRPYVQQALAQGHGRFYGIGLTTGE AGYFLSTAIRGDDGQTLGLVAIKILLTELEREWRQSPDVVLASDAHGVVFLASRDAWR YRLLAPLTPQARQELEATRQYTGQPLAPLGLQVERRVDEGTVLARAQEPPLPGPLLWH TQELAGAGWQLHLLHHADSAIEARRWAAGAAAGLWLALALLVLFVRQRQRLALLRQRS RQELETVLRQHAQELRTAQDGIVQAAREADTGLSRSLQHLPQGVVVIDRDLNLVAWNS RYVELFRFPPELMRVGTPVEALIRHNARRGLLGATPTEDAIQRRLQHLRSGKPHLHES AKSDGTVLEIRGNPLPDGGFVTSYADITSYKNAARELRSLADALELRIAERTRDLDAA RREAEAANRYKTRFVAAAVHDLLQPLNAARMFASLLRGHLHDAAGRQVADSIDGALAA QDGILNSLLDISRMESGQLEVHVRDFALGPLLQVMQHNFGIIAASRGLRLRTVGTRYA VRSDEALLRRILQNLVSNAIRYTPRGRVLIGCRRRGRYLRIEVHDQGPGIPESLQREI FEEFRRLGEGHSQDGDRGAGLGLAIVERLGKLLGHEIGLRSELGRGSVFWVCVPLADA AAAPRPAAAGAAAPPEGDQPLQGTTAWYIDDDAPSCEATGALLRRWGCEVPLAGGPQS ALDLAAPGNAPQLVLLDVRMGPFHGPDLYDRLCTVWGQAPSVVLVTAERSSTLRRQAA ERGWGYLLKPVRPSALRALISQMMLRKQ" sig_peptide 31185..31274 /locus_tag="Dtpsy_0028" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.807 at residue 30" gene complement(33910..34554) /locus_tag="Dtpsy_0029" /db_xref="GeneID:7382720" CDS complement(33910..34554) /locus_tag="Dtpsy_0029" /note="PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; SMART: regulatory protein LuxR; response regulator receiver; KEGG: ajs:Ajs_0011 two component LuxR family transcriptional regulator" /codon_start=1 /inference="protein motif:PFAM:PF00196" /transl_table=11 /product="two component transcriptional regulator, LuxR family" /protein_id="YP_002551518.1" /db_xref="InterPro:IPR000792" /db_xref="InterPro:IPR001789" /db_xref="InterPro:IPR013249" /db_xref="GI:222109254" /db_xref="GeneID:7382720" /translation="MPPPTLLVADDHPLFRAALIQVLHERFAPLQTLEAASAATLGQA LQDHPEVELVLLDLAMPGARGFSALLHVRGEYPQVPVVVISSNDHPRVIRRAQQFGAA GFIPKSAPAEDMGAAIRAVLDGGSWFPPMAAERSEADAALAAKLAQLTPQQFRVLLCL ADGLLNKQIAHELGLAENTVKVHVTAILKKLECYSRTQAAVLVKSLETEPEAAP" gene 34609..35862 /locus_tag="Dtpsy_0030" /db_xref="GeneID:7382721" CDS 34609..35862 /locus_tag="Dtpsy_0030" /note="PFAM: nucleoside recognition domain protein; KEGG: ajs:Ajs_0012 nucleoside recognition domain-containing protein" /codon_start=1 /inference="protein motif:PFAM:PF07670" /transl_table=11 /product="nucleoside recognition domain protein" /protein_id="YP_002551519.1" /db_xref="InterPro:IPR011642" /db_xref="GI:222109255" /db_xref="GeneID:7382721" /translation="MALNWVWTGFFIVAFATAVVRWLLGEAGIFQALLTALFDGARAG FEISLGLAGIMALWLGLMRVGERAGMVELLARLAGPLLTRLFPAVPAGHPAQGAMTMN ISANLLGLDNAATPLGLKAMQELQTLNREPAGAASNAQIMFVVMNTAGLTLIPTSVIA IRQSVALKQGLGAGFNAADIFLPTLLVTFASLLAGVLAVALFQRLPIWRARLLLPLLA VGGVLAAAVAGLAQLPAEQAAQIAGATGAGVILGVVALFLLAGAWRRVNVYDAFIDGA KEGFGVAVQIIPYLVAILAAIGVFRAAGCMDALLAAIGAGVAALGWNTDFLPALPVGL MKVLSGAGARGLMIDVLQTHGVNSFVGRLAAIVQGSTETTFYVLAVYFGSVGVKHTRH ALACALVADAVGLLAAIGVGYTLLR" gene 36339..36641 /locus_tag="Dtpsy_0031" /db_xref="GeneID:7382722" CDS 36339..36641 /locus_tag="Dtpsy_0031" /note="KEGG: ajs:Ajs_0013 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0013" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551520.1" /db_xref="GI:222109256" /db_xref="GeneID:7382722" /translation="MQALYCFPRPFPVTDSALLPLPDRLAIDPRSPHHVAAVFQQAAD IGIRFNGKERVDVEEYCVSEGWIKVPAGKTLDRKGRPLLITLKGSVEVFYKPEAAA" gene complement(36938..38125) /locus_tag="Dtpsy_0032" /db_xref="GeneID:7382723" CDS complement(36938..38125) /locus_tag="Dtpsy_0032" /EC_number="2.3.1.9" /note="KEGG: ajs:Ajs_0014 beta-ketothiolase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase" /codon_start=1 /inference="protein motif:TFAM:TIGR01930" /transl_table=11 /product="acetyl-CoA acetyltransferase" /protein_id="YP_002551521.1" /db_xref="InterPro:IPR002155" /db_xref="GI:222109257" /db_xref="GeneID:7382723" /translation="MTHREVFVVSTARTAIGTFGGSLKDVPNTQLATTAVKAAIARAG IAPDAVGHVVMGNVIPTDTKDAYLSRVAAIDAGCPIETPAFNVNRLCGSGLQAIISAA QAIGYGDCDVAVGGGSESMSRGPYFDQGARWGQRMGDSKSIDYMLGILHDPWQKMHMG ITAENVAERYQISREMQDQLALASQQRAAAAIAAGYFKEQIVPVEIATRKGTVLFQED EHVRAATTLDVLAGMKPAFKKEGGTVTAGNASGINDGAAAVVLVAGDRLQALNVKPLA RLVGYAHAGVDPAYMGIGPVPATQKVLQRTGLKVQDMDVIEANEAFAAQACAVVQELG LDPAKVNPNGSGISLGHPVGATGAIITTKAIAELHRTGGRYALVTMCIGGGQGIAAIF ERV" gene complement(38122..38673) /locus_tag="Dtpsy_0033" /db_xref="GeneID:7382724" CDS complement(38122..38673) /locus_tag="Dtpsy_0033" /note="PFAM: protein of unknown function DUF1130; KEGG: ajs:Ajs_0015 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF06571" /transl_table=11 /product="protein of unknown function DUF1130" /protein_id="YP_002551522.1" /db_xref="InterPro:IPR010556" /db_xref="GI:222109258" /db_xref="GeneID:7382724" /translation="MAAPPLYTIGHSTLTVQDFIALLQREGVTRVIDVRAIPRSLRQP QFHEDRLPGALAAQGIAYTHMPALGGRRPLQRGVPPTTNGYWDNRSFHNYADYALQPA FRAALAALRTAAAREPCAIMCAEAVWWRCHRRIITDHVLAAGGAVRHILGARTESATL TPAAQVHPDGTVTYPPPTTVSAP" gene complement(38686..38901) /locus_tag="Dtpsy_0034" /db_xref="GeneID:7382725" CDS complement(38686..38901) /locus_tag="Dtpsy_0034" /note="KEGG: ajs:Ajs_0016 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0016" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551523.1" /db_xref="GI:222109259" /db_xref="GeneID:7382725" /translation="MAHPFKVGDHVSWNSEAGRVSGRITAVHTRALQWKGYTHHACAE EPQYEIQSDKTDHVALHKGSALHRLAR" gene complement(39013..39516) /locus_tag="Dtpsy_0035" /db_xref="GeneID:7382726" CDS complement(39013..39516) /locus_tag="Dtpsy_0035" /note="KEGG: ajs:Ajs_0017 MerR family transcriptional regulator; TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; SMART: regulatory protein MerR" /codon_start=1 /inference="protein motif:TFAM:TIGR02044" /transl_table=11 /product="transcriptional regulator, MerR family" /protein_id="YP_002551524.1" /db_xref="InterPro:IPR000551" /db_xref="InterPro:IPR011789" /db_xref="InterPro:IPR015358" /db_xref="GI:222109260" /db_xref="GeneID:7382726" /translation="MSTAPRRLAHRVPRAVAGHAAALDWPVAIGTAAERAGVSARMLR HYESLGLLTGVARTDSGYRQYTEADVHTLRFIRRARDLGFSMEEIATLLGLWQDKQRA SSQVKRIAQAHIDNLSERIAAMQAMQRSLQALVHCCHGDDRPDCPILDDLAMAGIPNS GAADVAI" gene complement(39513..39710) /locus_tag="Dtpsy_0036" /db_xref="GeneID:7382727" CDS complement(39513..39710) /locus_tag="Dtpsy_0036" /note="PFAM: Heavy metal transport/detoxification protein; KEGG: ajs:Ajs_0018 heavy metal transport/detoxification protein" /codon_start=1 /inference="protein motif:PFAM:PF00403" /transl_table=11 /product="Heavy metal transport/detoxification protein" /protein_id="YP_002551525.1" /db_xref="InterPro:IPR006121" /db_xref="GI:222109261" /db_xref="GeneID:7382727" /translation="MQYTFQVQGMTCGHCERAVVHAVRQVDTDALVKVDLATGQVIVE SDKSREALANAIQEEGYKVAA" gene 39889..42237 /locus_tag="Dtpsy_0037" /db_xref="GeneID:7382728" CDS 39889..42237 /locus_tag="Dtpsy_0037" /note="TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: ajs:Ajs_0019 heavy metal translocating P-type ATPase" /codon_start=1 /inference="protein motif:TFAM:TIGR01525" /transl_table=11 /product="heavy metal translocating P-type ATPase" /protein_id="YP_002551526.1" /db_xref="InterPro:IPR000150" /db_xref="InterPro:IPR000579" /db_xref="InterPro:IPR001756" /db_xref="InterPro:IPR001757" /db_xref="InterPro:IPR005834" /db_xref="InterPro:IPR006121" /db_xref="InterPro:IPR006403" /db_xref="InterPro:IPR006416" /db_xref="InterPro:IPR008250" /db_xref="GI:222109262" /db_xref="GeneID:7382728" /translation="MTSASLSPAATGDAPAGTLDLGIAGMTCASCVGRVERALRKVPG VQDATVNLATERAHIVFDAASGGGMEALARRAVRNAGYEPRSVEEQEAGEEGAQSPWA GFTPVAVGLLLSAPLVLPMLGDLFGLHWMLPAWVQFILATPVQFILGARFYKAGWHAA KALTGNMDLLVAIGTSAGYGLSLWLWATAESTHGAGHTPHLYFEASAVVITLVLLGKW LEARAKRQTTAAIRALHALRPEVAHLLGRDGEVDVPIAEVMAGDRLVVRPGERIPVDG TVVEGHTQVDESMLTGEPLPVARSADGPEGGALTGGSINGDGRIVMQVTAVGSETVLA RIIRLVEDAQAAKAPIQRLVDKVSAVFVPVVLAIAIVTLLGWLWTGAGVEAALIHAVA VLVIACPCALGLATPAAIMAGTGVAARHGILIKDAEALETAHRVQTVAFDKTGTLTVG RPRLTAFHVEPGVDEAALLSAVAAVQSGSEHPLARAVVSAAQERGLPAPAPDGVRAVP GRGTEGEVAARSYLVGSLRWMQELGVDLGPLADRAATLQAEGATVSAVAERVAQDPSG ARPPEAASAPLGGSEDTIVPSAGAHYVLRALLAFGDEPKPGAREALAHLRTQGVRCVM ISGDNRGAAEAMARRLGLQPEAGEVMAEVLPGDKAAAVNALKAQGHVVAMVGDGVNDA PALAAADVGMAMGNGTDVAMHAAGITLMRGDPQLVAAALDISRRTVAKIRQNLFWAFA YNVAGIPLAALGYLSPVVAGAAMALSSVSVMTNALLLKRWRG" gene 42422..44074 /locus_tag="Dtpsy_0038" /db_xref="GeneID:7382729" CDS 42422..44074 /locus_tag="Dtpsy_0038" /note="PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; SMART: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: ajs:Ajs_0020 methyl-accepting chemotaxis sensory transducer" /codon_start=1 /inference="protein motif:PFAM:PF00015" /transl_table=11 /product="methyl-accepting chemotaxis sensory transducer" /protein_id="YP_002551527.1" /db_xref="InterPro:IPR003660" /db_xref="InterPro:IPR004089" /db_xref="InterPro:IPR004090" /db_xref="GI:222109263" /db_xref="GeneID:7382729" /translation="MNIYALMRLFTIRLRMIGAIGVVLGLLGLLGGAGMLGMFRIHGL AQDFVSQPHAAVKLMGQLRSEMGEIRQHEKDMIIHYERPESVRAAHDRWLASLDRAGK VTATLGQIWQGEDLAEAKDVAKHLVAYREQFAHVARQLEAGGYDTATIANRMSGKAVE QFNIATEKVAALDKRLAAEVDSAIAHQDRVTDQTKWLFALAVLITVVVVVPLTLLNMV SICRPLEVARAMAQAIAGGDLSQRIHVEGRDEAADLQRALLDMQTGLGAMVAQVRDAS SNIATASQEIATGNQDLSSRTEQTASNAQEAVAALSQLTATVQQTASSSQVANQLVTS ASGIATRGGQVVQQAVNSMHEISSSSRKIGDIIGLIDSIAFQTNILALNAAVEAARAG EQGRGFAVVAGEVRSLAQRSAAAASEIKGLISSSVTAVDGGVRHVEDAGKAMQEIVSS VQRVTDIIGEINSAASEQAGGIGEVNASVGEIDRMTQQNAALVEESAAAAESLREQAA RLSQVVSQFQLADDGHAPAAFTRSGAPAPALRGGDTPRLSAA" sig_peptide 42422..42559 /locus_tag="Dtpsy_0038" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.882) with cleavage site probability 0.639 at residue 46" gene complement(44261..45010) /locus_tag="Dtpsy_0039" /db_xref="GeneID:7382730" CDS complement(44261..45010) /locus_tag="Dtpsy_0039" /note="PFAM: protein of unknown function DUF81; KEGG: dac:Daci_2500 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF01925" /transl_table=11 /product="protein of unknown function DUF81" /protein_id="YP_002551528.1" /db_xref="InterPro:IPR002781" /db_xref="GI:222109264" /db_xref="GeneID:7382730" /translation="METPAVLVLGAVVAGFVQGLSGFAFSMVAMSFWVWVLEPHLAAA LAVFGSLTGQVLAAVTMRRGFNAALLWPFILGGLVGVPVGASLLPHLNAHWFKALLGT LLVCWCPAMLMARSLPRVRWGGRTADAVVGLCGGVMGGIGGFTGVLPTLWCTLRGLPK DTQRAVVQNFNLAMLAVAMATYLAKGLVTRDMLPAFGIVATAVLVPVLLGTRLYIGIS EVRFRQIVLGLLTVSGGALLVASVPRLLAPA" sig_peptide complement(44915..45010) /locus_tag="Dtpsy_0039" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.928) with cleavage site probability 0.619 at residue 32" gene complement(45165..46289) /locus_tag="Dtpsy_0040" /db_xref="GeneID:7382731" CDS complement(45165..46289) /locus_tag="Dtpsy_0040" /note="PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: ajs:Ajs_0022 NADH:flavin oxidoreductase/NADH oxidase" /codon_start=1 /inference="protein motif:PFAM:PF00724" /transl_table=11 /product="NADH:flavin oxidoreductase/NADH oxidase" /protein_id="YP_002551529.1" /db_xref="InterPro:IPR001155" /db_xref="GI:222109265" /db_xref="GeneID:7382731" /translation="MPTLFDPIQAGDLHLANRIAMAPLTRNRSPRAVPRDITATYYAQ RASAGLLITEGTAITHQGQGYSDVPGLYGTEQLDGWKRVTQAVHARGGKIVTQLWHVG RVSHTALQPEGGAPVAPSAVRAQSQTYLVDAASGQGQFVPTSEPRALAAEELPDIVHA FAAAARNAVQTAGFDGVEIHGANGYLLDQFLKDGANQRKDDYGGGIANRVRLMVEVTR AVVDAIGGGRVGIRLSPVTPANDIHDSDPQPLFEHLARELAPLGLAFIHVIEGATGGP REVEGRPFDYAAFKNAYRSAGGRGAWMVNNGYDRDMAQEALASGRADIVAFGRAFISN PDLVERLRRGAPLNAWDQTTFYGGGEHGYIDYPALEQAPA" gene complement(46360..46545) /locus_tag="Dtpsy_0041" /db_xref="GeneID:7382732" CDS complement(46360..46545) /locus_tag="Dtpsy_0041" /codon_start=1 /inference="ab initio prediction:Prodigal:1.4" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551530.1" /db_xref="GI:222109266" /db_xref="GeneID:7382732" /translation="MAAPGICGARLVRAGASPQKSPTRRTPGAIQGRQPAPPPYPSLF DVAQNPWFCSAWVYCTP" gene complement(46553..47161) /locus_tag="Dtpsy_0042" /db_xref="GeneID:7382733" CDS complement(46553..47161) /locus_tag="Dtpsy_0042" /note="PFAM: Glutathione S-transferase domain; KEGG: ajs:Ajs_0023 glutathione S-transferase domain-containing protein" /codon_start=1 /inference="protein motif:PFAM:PF02798" /transl_table=11 /product="Glutathione S-transferase domain protein" /protein_id="YP_002551531.1" /db_xref="InterPro:IPR004045" /db_xref="InterPro:IPR004046" /db_xref="GI:222109267" /db_xref="GeneID:7382733" /translation="MKLYYSPGACSLSPHIVLHETGLAHTSVLASTKSHKLQDGTDYY TINPLGYVPVLELDDGTRLREGPAIVQYLADQAPHKNLAPANGTLARYRLQEWLTFIG TEIHKGFTPLFKPTTPADYKPLVHEQLLSRLKWVDGELAHKPYLMGEHFSVADAYLFT VTNWAPAVNLDISALKNLAAYRERIAARPAVQAAMKAEGLLK" gene complement(47296..47562) /locus_tag="Dtpsy_0043" /db_xref="GeneID:7382734" CDS complement(47296..47562) /locus_tag="Dtpsy_0043" /note="PFAM: protein of unknown function UPF0153; KEGG: ajs:Ajs_0024 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF03692" /transl_table=11 /product="protein of unknown function UPF0153" /protein_id="YP_002551532.1" /db_xref="InterPro:IPR005358" /db_xref="GI:222109268" /db_xref="GeneID:7382734" /translation="MDCRPGCGACCTAPSISSPIPGMPHGKPAGMRCVQLDDDARCRI FGRPERPAVCASLRPSPAMCGDSRAHAMRWLALMEQATQPSTPR" gene complement(47628..48212) /locus_tag="Dtpsy_0044" /db_xref="GeneID:7382735" CDS complement(47628..48212) /locus_tag="Dtpsy_0044" /note="PFAM: NADPH-dependent FMN reductase; KEGG: ajs:Ajs_0025 NADPH-dependent FMN reductase" /codon_start=1 /inference="protein motif:PFAM:PF03358" /transl_table=11 /product="NADPH-dependent FMN reductase" /protein_id="YP_002551533.1" /db_xref="InterPro:IPR005025" /db_xref="GI:222109269" /db_xref="GeneID:7382735" /translation="MKFLVFAGSTRTQSFNRRLAAVAAHMARDAGAEVTLLELADFDI PLYNADLETAGTPADVIRLKEVLDAHPAWVICSPEYNGSYTGLLKNTIDWASSPVAGH AEWSDGTRPFAGKVVGMLSASNGALGGLRSQSHLAPLLLNLECWLAPRHFALPRAASA FDAQGQLVDASQAAHVRGVVEQVLWAAGRLHGTA" gene 48425..50398 /locus_tag="Dtpsy_0045" /db_xref="GeneID:7382736" CDS 48425..50398 /locus_tag="Dtpsy_0045" /note="TIGRFAM: glucose inhibited division protein A; PFAM: glucose-inhibited division protein A; KEGG: ajs:Ajs_0026 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA" /codon_start=1 /inference="protein motif:TFAM:TIGR00136" /transl_table=11 /product="glucose inhibited division protein A" /protein_id="YP_002551534.1" /db_xref="InterPro:IPR002218" /db_xref="InterPro:IPR004416" /db_xref="GI:222109270" /db_xref="GeneID:7382736" /translation="MLYPQDFDVIVVGGGHAGTEAALAAARMGSRTLLLTHNIETLGQ MSCNPSIGGIGKGHLVKEVDALGGAMALATDEAGIQFRILNSSKGPAVRATRAQADRI LYKAAIRRMLENQPNLWLFQQAVDDLMVEGDRVVGAVTQVGIRFRSRAVVLTAGTFLD GKIHVGLNNYAAGRAGDPPAVSLSARLKELQLPQGRLKTGTPPRIDGRSIDFSQCEEQ PGDGMPGGVNEGAVPVFSFMGNAAMHPRQVPCWITHTNARTHEIIRSGFDRSPMFTGK IEGVGPRYCPSVEDKINRFADKESHQIFLEPEGLTTHEFYPNGISTSLPFDIQYDLVR SMRGLENAHILRPGYAIEYDYFDPRSLKSSFETRQIQGLFFAGQINGTTGYEEAAAQG LFAGINAALQCRGERAWVPARDEAYLGVLVDDLITKGVTEPYRMFTSRAEFRLQLRED NADMRLTDAGRRMGLVDDARWDAFSRKRDAVSRETERLKSTWVNPRNLPTVEAERVLG KAIEHEYNLFDLLRRPDVGYDALTTMDGGKYASEAVSRETLGELSAPVIEQVEIAAKY AGYIERQRDEVQRAAHFEKLRLPEDLDYMQVAALSIEVRQKLQKHRPETLGQASRISG VTPAAISLLMVHLKKGGFKGFAPQPADGVETVA" gene 50395..51075 /locus_tag="Dtpsy_0046" /db_xref="GeneID:7382737" CDS 50395..51075 /locus_tag="Dtpsy_0046" /note="TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein; KEGG: ajs:Ajs_0027 methyltransferase GidB" /codon_start=1 /inference="protein motif:TFAM:TIGR00138" /transl_table=11 /product="methyltransferase GidB" /protein_id="YP_002551535.1" /db_xref="InterPro:IPR003682" /db_xref="GI:222109271" /db_xref="GeneID:7382737" /translation="MSVVSNTSLEHALREGANALGLDLSEAQITQLLDFLALLQKWNK VYNLTAVRDPQEMLTHHLLDSLAAVPPLRRHVARRGQGGAIHLGARLLDVGSGGGLPG VVFAICCPEVDVSCVDTVAKKAAFIQQAAGTLGLSNLHGIHARVETLAGPFDVVSCRA FAALADFTAWSRQALAPHGVWLAMKGKHPHDEIAALPADVSVFHVEQLTVPGLQAERC ILWLRPVA" gene 51110..51724 /locus_tag="Dtpsy_0047" /db_xref="GeneID:7382738" CDS 51110..51724 /locus_tag="Dtpsy_0047" /note="PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: ajs:Ajs_0028 lysine exporter protein LysE/YggA" /codon_start=1 /inference="protein motif:PFAM:PF01810" /transl_table=11 /product="Lysine exporter protein (LYSE/YGGA)" /protein_id="YP_002551536.1" /db_xref="InterPro:IPR001123" /db_xref="GI:222109272" /db_xref="GeneID:7382738" /translation="MFGIADYGAFVAAIVLFLAIPGPGNLALITSTGKGGVRAGMAAC MGVIAADQVLMWMAVAGVAGLLAAYPAAFHAVQWLGAVYLGWMGYKMLTAKPGDAPVL NIAPRHYFRQGAVITLLNPKAIVFYMAFFPLFVNPATHRGLVTFAAMAATIATLTFLY SLVVVLLTHFLAERMRANPTVARVLEKTAGVFLIGFGVKLAISK" gene 51741..52511 /locus_tag="Dtpsy_0048" /db_xref="GeneID:7382739" CDS 51741..52511 /locus_tag="Dtpsy_0048" /note="PFAM: Cobyrinic acid ac-diamide synthase; KEGG: ajs:Ajs_0029 chromosome segregation ATPase" /codon_start=1 /inference="protein motif:PFAM:PF01656" /transl_table=11 /product="Cobyrinic acid ac-diamide synthase" /protein_id="YP_002551537.1" /db_xref="InterPro:IPR000392" /db_xref="InterPro:IPR002586" /db_xref="GI:222109273" /db_xref="GeneID:7382739" /translation="MAKIFCIANQKGGVGKTTTSVNLAAGLAKIGQRVLLVDLDPQGN ATMGSGVDKRALELSVYDVLLESASVPEAAVLSEQCGYRVLGANRELAGAEVELVPLE QRERRLKAALAAVDSDYDFVLIDCPPSLSMLTLNGLCSAHGVIVPMQCEYFALEGLTD LVNTIKQVHANLNPDLQIIGLLRVMFDPRITLQSQVSEQLKDHFGDKVFDTVIPRNVR LAEAPSYGLPGVVFDPAAKGSQAFVEFAREMVERVKRM" gene 52598..53140 /locus_tag="Dtpsy_0049" /db_xref="GeneID:7382740" CDS 52598..53140 /locus_tag="Dtpsy_0049" /note="PFAM: protein of unknown function DUF1234; KEGG: ajs:Ajs_0030 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF06821" /transl_table=11 /product="protein of unknown function DUF1234" /protein_id="YP_002551538.1" /db_xref="InterPro:IPR010662" /db_xref="GI:222109274" /db_xref="GeneID:7382740" /translation="MNPSQILLLPGWQNSGPGHWQTEWERLHGYQRVQQHDWMRPLRG DWSARLEEVVADAPGEVVLAAHSLGCILTAWWAAHTRYAHKVRGALLVAPGDVERPDL AAQIPGWAPIARQVLPFPAVLVGSQDDPYCSFERAQTLAGAWGARFVDCGPRGHINAD SDLGEWPEGHALLRALMNKD" gene 53147..54142 /locus_tag="Dtpsy_0050" /db_xref="GeneID:7382741" CDS 53147..54142 /locus_tag="Dtpsy_0050" /note="KEGG: ajs:Ajs_0031 chromosome segregation DNA-binding protein; TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease" /codon_start=1 /inference="protein motif:TFAM:TIGR00180" /transl_table=11 /product="parB-like partition protein" /protein_id="YP_002551539.1" /db_xref="InterPro:IPR003115" /db_xref="InterPro:IPR004437" /db_xref="GI:222109275" /db_xref="GeneID:7382741" /translation="MVTKKPKGLGRGLEALLGPKVADKAPAGANAAGAADGPVSTLAL DRLVPGIYQPRTRMDEGALYELAESIKAQGIMQPILVRRLDDEQAQQRRQERASQGAS AAMGALSASGPLYEIIAGERRFRASRLAGLAEVPVLVRDVPNEAAAAMALIENIQRED LNPLEEAQGLQRLIREFGLTHELAAQAVGRSRSAASNLLRLLNLAEPVQTMLMAGDID MGHARALLSLERAAQITAGNQIAAKKLSVREAESLVKKLGAEFALTPQKPKKDKSRDL KRVEEELSDLLMAEVEVRVKKRVKRGSRVEEMGELAIQFGSLEALNGLIERLRGG" gene 54168..54965 /locus_tag="Dtpsy_0051" /db_xref="GeneID:7382742" CDS 54168..54965 /locus_tag="Dtpsy_0051" /note="KEGG: ajs:Ajs_0032 methyltransferase type 12" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0032" /transl_table=11 /product="methyltransferase type 12" /protein_id="YP_002551540.1" /db_xref="InterPro:IPR000209" /db_xref="GI:222109276" /db_xref="GeneID:7382742" /translation="MPRRPRRLHHLHAPPPRRIVLPWPLPAVLVWAAAWLLFAGLRGS VAPLAALGLACAVGVAGSLLAQGWWRRGLIALGFPLSAALGGAVALPAWGWLLPLALL LLVYPLNAWRDAPLFPTPPGALHGLQDAVPLSAGAPVLDAGCGLGDGLKALRAAYPQA RLHGLEWSGPLALLCRLRCPWARVRRGDIWATDWGGYDLVYVFQRPESMARVAAKARA EMAPGRWLVSLAFAVPGVRPSARLDSFAGHAVWIYQLPLPADSAAPH" gene 55131..56171 /locus_tag="Dtpsy_0052" /db_xref="GeneID:7382743" CDS 55131..56171 /locus_tag="Dtpsy_0052" /note="PFAM: Peptidoglycan-binding domain 1 protein; KEGG: ajs:Ajs_0033 peptidoglycan binding domain-containing protein" /codon_start=1 /inference="protein motif:PFAM:PF01471" /transl_table=11 /product="Peptidoglycan-binding domain 1 protein" /protein_id="YP_002551541.1" /db_xref="InterPro:IPR002477" /db_xref="GI:222109277" /db_xref="GeneID:7382743" /translation="MSRKPLTLLAAACAALALTGCETTNMRMGSAESKTVATGAAAGG SAANESGQLERCQSPLGTVSLVENQDAGWYTILRNEYKLPPTANLLRLLIQQSNCFIV VERGAAGMRAMDRERQLMGSGEMRGGSNFGRGQMVASDYGMSPEIIFSNNDAGAIGGV LGGLIGGGSGRALAAVGGGLKTREASAMLTLVDNRSGVQVAASEGSASKSDFAGFGSL FGGSAGGGLGGYQNTAQGKVITAAFMDAYNQMVVALRSYKAQSVQGQGLGGGGRLGVD GGAAPSQTRAGAAMSVREAQERLNAMGYNVGTPDGSAGPKTARALREFQQAQGLPVTG RLDSATAGALSR" sig_peptide 55131..55193 /locus_tag="Dtpsy_0052" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.926 at residue 21" gene 56416..57132 /locus_tag="Dtpsy_0053" /db_xref="GeneID:7382744" CDS 56416..57132 /locus_tag="Dtpsy_0053" /note="KEGG: reh:H16_B2252 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:H16_B2252" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551542.1" /db_xref="GI:222109278" /db_xref="GeneID:7382744" /translation="MYLSLPPFWSSWLAWPKPPPAPDASGVFSSFLDVSRRQARRLAQ PAELRIDVDPPDATIEQELSALHQRLHSPGDALHGLPSTPLPGHPGLFVRSRVADGEL YVYIEDPLRQCLAGTTVFNRLVELNRRADRHLRAPHSRYAPAYQRRGLATAVYRWALD GGQCLVSGARQSAGAHALWQRLGRDYPQGYVCLQHKTPRYLGRQVDARVQEALATRRL LLGRGWTLARLAAATGMLSA" gene complement(57198..58118) /locus_tag="Dtpsy_0054" /db_xref="GeneID:7382745" CDS complement(57198..58118) /locus_tag="Dtpsy_0054" /note="PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ajs:Ajs_0038 AraC family transcriptional regulator" /codon_start=1 /inference="protein motif:PFAM:PF02311" /transl_table=11 /product="transcriptional regulator, AraC family" /protein_id="YP_002551543.1" /db_xref="InterPro:IPR000005" /db_xref="InterPro:IPR003313" /db_xref="GI:222109279" /db_xref="GeneID:7382745" /translation="MPSPSLPRPAPPPAEPAAASTAGRAARPARVLSYVESLTPHLFV PSRERPVRAKHRELRADTQVRPHSHPWAQVAISTTGVLRLTVPRGTYIVPPSRALWIP PGVEHAVTMVEDADLRTLYFYQPPGRCGPAVARAQEEPWRQCRVLEVSELLRAVVREM PTDPDDGAPPPPELLHRERHLSALILDELRRASSVRLGVDLPRDKRLRHLCEAVLADP TRHDTLADWARDTGASPRTVARLFRQELGSTFTQWRQQVILARAVALAAGRKPINQIA AELGYNSPSAFSAMVRRAVGLAPGRFLGSP" gene 58178..59425 /locus_tag="Dtpsy_0055" /db_xref="GeneID:7382746" CDS 58178..59425 /locus_tag="Dtpsy_0055" /note="PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_0039 major facilitator superfamily transporter" /codon_start=1 /inference="protein motif:PFAM:PF07690" /transl_table=11 /product="major facilitator superfamily MFS_1" /protein_id="YP_002551544.1" /db_xref="InterPro:IPR007114" /db_xref="InterPro:IPR011701" /db_xref="GI:222109280" /db_xref="GeneID:7382746" /translation="MPMTTAAPTLRQDARTIGLIGLAHGSSHFFHLLLPPLFPFLIAE FGYSYSELGLLVSVFFVVSGVGQALSGFLVDRVGARPVLFAALASFALAGLTAGSASG YLGLVVASVLAGLGNAPFHPVDFTILNKRVSPARLGHGFSVHGISGNLGWATAPLFMA GIATATGSWRMACLSGGALALVILAIMVWNRDALDDRQGTWAHAPAKGATGSAHAQEH PMAFLKLPAVWLCFSFFFWSTCSLSAIQSFAAPALQRMYDMPLSLTSMVVTGYMLCSA VGMVIGGFLVGRVVRLEKTISICLMASAALLVLVGLGALPGTVALAVAALAGMGVGIA GPSRDMLIKRAAPPGATGRVYGTVYSGLDLGFSVAAPLFGVLLDRGQTADIFYGSALA LVLSVVSAALVGGGVARRQAQAA" gene 59741..60484 /locus_tag="Dtpsy_0056" /db_xref="GeneID:7382747" CDS 59741..60484 /locus_tag="Dtpsy_0056" /note="PFAM: ChaC family protein; KEGG: rru:Rru_A2776 ChaC-like protein" /codon_start=1 /inference="protein motif:PFAM:PF04752" /transl_table=11 /product="ChaC family protein" /protein_id="YP_002551545.1" /db_xref="InterPro:IPR006840" /db_xref="GI:222109281" /db_xref="GeneID:7382747" /translation="MEPHAFRHLPELQGRLTPPQASGLRLTDEVLAAWDAQARQQGLS ADWRLPDDVVERSRQAVLAQSEGCDLWVFAYGSLMWNPAIHFDEVRRARLADHARRFA LATTIGRGTPDSPGLVLTLQRGVGDCEGLAFRIPQALLERESRMLWRREMIHGSYCPG FQPLHTPQGGVRALVLSANTAHPLHRGGLSLDDTAAIIASAQGSVGSNRDYLDQLACQ LDLLGIRDDYVRCLAARVRAHRAAPNRGG" gene 60623..61225 /locus_tag="Dtpsy_0057" /db_xref="GeneID:7382748" CDS 60623..61225 /locus_tag="Dtpsy_0057" /note="TIGRFAM: flavoprotein WrbA; PFAM: NADPH-dependent FMN reductase; flavodoxin/nitric oxide synthase; KEGG: azc:AZC_4089 flavoprotein" /codon_start=1 /inference="protein motif:TFAM:TIGR01755" /transl_table=11 /product="flavoprotein WrbA" /protein_id="YP_002551546.1" /db_xref="InterPro:IPR005025" /db_xref="InterPro:IPR008254" /db_xref="InterPro:IPR010089" /db_xref="GI:222109282" /db_xref="GeneID:7382748" /translation="MSKVLVLYYSTYGHLETMAQAVAEGARSAGATVDVKRVPETVPQ EIARSAHFKLDQSAPVATVTELENYDAIIVGAPTRFGRMPSQMGSFLDQAGGLWARGA LNGKVGAAFTSTATQHGGQETTLFSIITNLLHFGMVIVGLPYSFQGQMTLDEVVGGAP YGATTIAGGQGQRQPSATELDGARFQGRLVAETANKLFGG" repeat_region 61561..62454 /note="CRISPRs" /rpt_unit_range="61561..61596" gene complement(62519..62827) /locus_tag="Dtpsy_0058" /db_xref="GeneID:7382749" CDS complement(62519..62827) /locus_tag="Dtpsy_0058" /note="TIGRFAM: CRISPR-associated protein Cas2; PFAM: protein of unknown function DUF196; KEGG: pmu:PM1125 hypothetical protein" /codon_start=1 /inference="protein motif:TFAM:TIGR01573" /transl_table=11 /product="CRISPR-associated protein Cas2" /protein_id="YP_002551547.1" /db_xref="InterPro:IPR003799" /db_xref="GI:222109283" /db_xref="GeneID:7382749" /translation="MRMLVFFDLPVVSKADRRAYTVFRRFLLNDGYDMIQFSVYGRIL NGTDAAQKHMQRLLANLPSEGSVRVLTVTEKQFASMKLLVGLPLFQEKKVNAAQIALF " gene complement(62864..63772) /locus_tag="Dtpsy_0059" /db_xref="GeneID:7382750" CDS complement(62864..63772) /locus_tag="Dtpsy_0059" /note="TIGRFAM: CRISPR-associated protein Cas1; protein of unknown function DUF48; PFAM: protein of unknown function DUF48; KEGG: asu:Asuc_0377 CRISPR-associated Cas1 family protein" /codon_start=1 /inference="protein motif:TFAM:TIGR03639" /transl_table=11 /product="protein of unknown function DUF48" /protein_id="YP_002551548.1" /db_xref="InterPro:IPR002729" /db_xref="GI:222109284" /db_xref="GeneID:7382750" /translation="MVWRSIVINRPAKLKREHFALVVEQEQSARVPFEDIAVIVLNHR EITLTHPVLSACGEYGIGLYSTGDNHQPNGVFMPFLQHSRATRMQRLQLDLDKPSAKR AWAHIVQVKIGNQARCMELLGTVGTDRLASYARRVRSGDGGNLEAQASAYYFPQVFGR SFHRSQTGWSNAALDYGYAVMRGACARALVAHGMLPSLGLFHRSEQNAFNLADDLIEP YRPVVDLHVAQHRPADEDAELQPSDKVALVGLLNVDVAMPRGQMSVLASIEQAAESLA RLYDGGSEQVLELPRLIGLRQHVFEI" gene complement(63759..67154) /locus_tag="Dtpsy_0060" /db_xref="GeneID:7382751" CDS complement(63759..67154) /locus_tag="Dtpsy_0060" /note="TIGRFAM: CRISPR-associated protein, Csn1 family; KEGG: pmu:PM1127 hypothetical protein" /codon_start=1 /inference="protein motif:TFAM:TIGR01865" /transl_table=11 /product="CRISPR-associated protein, Csn1 family" /protein_id="YP_002551549.1" /db_xref="InterPro:IPR010145" /db_xref="GI:222109285" /db_xref="GeneID:7382751" /translation="MAQHVFGLDIGIASVGWAILGEQRIIDLGVRCFDKAETAKEGDP LNLTRRQARLLRRRLYRRAWRLTQLSRLLKRKGLIADAKLFAKAPSYGDSAWELRRQG LDRLLTPLEWARVIYHQCKHRGFHWTSKAEEAKADSDAEGGRVKQGLAHTKALMQAKN YRSAAEMVLAEFPDAQRNKRGQYDKALSRVLLGEELALLFATQRRLGNPHASDFFEKL ILGDGDRKSGLFWQQKPALSGADLLKMLGKCTFEKGEYRAPKASFSVERHVWLTRLNN LRIVVDGRSRPLNEAERQAALLLPYQTETSKYKTLKNAFIKAGLWGDGVRFGGLAYPS QAQIDAEKTKDPEDQFLVKLPAWHELRKAFKAAGHEALWQQISTPALDGDPTLLDQIA TVLSVYKDGAEVVQQLRQLALPEPAASIAVLEKISFDKFSSLSLKALRRIVPLMQSGL RYDEAVAQIPEYGHHSQRIEPGAAKHLYLPPFYEAQRKYAGKGDHIGSMQFRDDADIP RNPVVLRALNQARKVVNALIREYGSPIAVNIEMARDLSRPLDERNKVKRAQEEFRDRN DRARSEFERDFGYKPKAAAFEKWMLYREQLGQCAYSQQPLDIQRVLDDHNYAQVDHAL PYSRSYDDSKNNKVLVLTHENQNKGNRTAFEYLTSFPDGEDGERWRTFVAWVQGNKAY RMAKRNRLLRKNYGVDESKGFIDRNLNDTRYICKFFKNYVEEHLQLAARADGDTARRC VVVNGQLTAFLRARWGLTKVRGDSDRHHALDAAVVAACTHGMVKALADYSRRKEISFL QEGFPDPETGEILNPAAFDRARQHFPEPWTHFAHELKARLFTDDLAALREDMQRLGSY TTEDLGRLRTLFVSRAPQRRSGGAVHKETIYAQPESLKQQGGVIEKILLTSLKLQDFD KLLNPESNDHFVEPHRNERLYAAIRQRLEQFGGRADKAFGPDNLFHKPDKNNQPTGPV VRSIKLVRGKQTGIPIRGGLAKNDSMLRVDIFTKAGKFHLVPVYVHHRVTGLPNRAIV AFKDEDEWTLIDESFAFLFSVYPNDYVKVTLKKEQQSGYYSGADRSTGAMNLWAHDRA ASVGKDGLIRGIGVKTALSVEKFNVDVLGRIYLAPPETRSGLA" gene complement(67350..68774) /locus_tag="Dtpsy_0061" /db_xref="GeneID:7382752" CDS complement(67350..68774) /locus_tag="Dtpsy_0061" /note="PFAM: FAD linked oxidase domain protein; KEGG: ajs:Ajs_0040 fis family transcriptional regulator" /codon_start=1 /inference="protein motif:PFAM:PF02913" /transl_table=11 /product="FAD linked oxidase domain protein" /protein_id="YP_002551550.1" /db_xref="InterPro:IPR004113" /db_xref="InterPro:IPR006094" /db_xref="GI:222109286" /db_xref="GeneID:7382752" /translation="MNAPATTAHLQPLTTPRPVPQAMLDALAARFGAQYSAAQAVCEQ HGRDEGSLQAPPPAAVVFAENTQDVQDAVRLAAQYGVPVIPYGAGSSLEGHLLAVQGG ISIDMGRMNRVLSVDADDLTVTVQPGITRKQLNEAIKDTGLFFPIDPGADASIGGMAA TRASGTNAVRYGTMRENVLALEVVTASGEVIRTGTRAKKSSAGYDLTRLMVGSEGTLG LFTEVTVRLYPLPEAVSAAICSFPTIEAAVRTVIQTIQLGVPIARVELIDANSVRMVN AHSKLRLREEPLLLMEFHGSPAGVQEQAEVVQDIAREWDGNAFEWATTPEERTRLWTA RHNAYFAAVQSRPGCKAISTDTCVPISRLADCLLDSVAEADASGIPYFLVGHVGDGNF HFGYLLDPAVTAERETAERLNHQLVARALRLGGTCTGEHGVGVHKMGFLVDEAGEGAV EMMRAIKRALDPQNILNPGKIFAL" gene complement(69026..69406) /locus_tag="Dtpsy_0062" /db_xref="GeneID:7382753" CDS complement(69026..69406) /locus_tag="Dtpsy_0062" /note="KEGG: ajs:Ajs_0042 calcium-binding EF-hand-containing protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0042" /transl_table=11 /product="calcium-binding EF-hand-containing protein" /protein_id="YP_002551551.1" /db_xref="InterPro:IPR002048" /db_xref="GI:222109287" /db_xref="GeneID:7382753" /translation="MPHTPQRRTLPSFDARSVMLFAALTVGGAAAQAQTPSAPSAQPQ YQTGPGPATTQPKATFGGSSTATPSGSSASASAFERADANRDGQLSSAEAGQLPAIAN RFQALDKDKNGSLSRTEFEAGSRS" sig_peptide complement(69305..69406) /locus_tag="Dtpsy_0062" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.930 at residue 34" gene 69562..70134 /locus_tag="Dtpsy_0063" /db_xref="GeneID:7382754" CDS 69562..70134 /locus_tag="Dtpsy_0063" /note="TIGRFAM: ATP/cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: ajs:Ajs_0043 ATP:cob(I)alamin adenosyltransferase" /codon_start=1 /inference="protein motif:TFAM:TIGR00636" /transl_table=11 /product="ATP/cobalamin adenosyltransferase" /protein_id="YP_002551552.1" /db_xref="InterPro:IPR002779" /db_xref="InterPro:IPR017858" /db_xref="GI:222109288" /db_xref="GeneID:7382754" /translation="MGNRLTQIATRTGDDGSTGLGDNTRVSKASGRPQAMGDVDELNS HIGLLLCEPLPADMRELLIDVQHQLFNLGGELSMPGYELLKDDALLQLDNALARYNAE LPRLLEFILPAGTRAACQAHVCRTVARRAERAVVALQQHETMRAAPRQYLNRLSDLLF VLSRALNRMDGGSEVYWKSERLARQNDATE" gene complement(70493..70915) /locus_tag="Dtpsy_0064" /db_xref="GeneID:7382755" CDS complement(70493..70915) /locus_tag="Dtpsy_0064" /note="PFAM: thioesterase superfamily protein; KEGG: ajs:Ajs_0044 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF03061" /transl_table=11 /product="thioesterase superfamily protein" /protein_id="YP_002551553.1" /db_xref="InterPro:IPR003736" /db_xref="InterPro:IPR006683" /db_xref="GI:222109289" /db_xref="GeneID:7382755" /translation="MTLWKKPTTLALITASSANTAVSHLGIEFTEVGDDFLRARVPVD ERTRQPFGLLHGGVSVVLAETLGSVGAYHASPEGWLAVGLDINANHLRAARSGWVTGT ARPVHIGKTTQVWQIDMVNDAGELTCVSRITMAMLAPK" sig_peptide complement(70844..70915) /locus_tag="Dtpsy_0064" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.997) with cleavage site probability 0.518 at residue 24" gene 71139..72296 /locus_tag="Dtpsy_0065" /db_xref="GeneID:7382756" CDS 71139..72296 /locus_tag="Dtpsy_0065" /note="PFAM: Extracellular ligand-binding receptor; KEGG: ajs:Ajs_0045 extracellular ligand-binding receptor" /codon_start=1 /inference="protein motif:PFAM:PF01094" /transl_table=11 /product="Extracellular ligand-binding receptor" /protein_id="YP_002551554.1" /db_xref="InterPro:IPR000709" /db_xref="InterPro:IPR001828" /db_xref="GI:222109290" /db_xref="GeneID:7382756" /translation="MQRRQFVLQAGRAAALAAAPAFVLPARAQDAPGVSAKALSIGCS AAMSGPLLGFGTDIQLGAGAAFAQANARGGVHGRTLQLQMVDDAYDPERTLANVKQII GQGSALALLSCVGTPNNTAIVPLVEEAGIPYVAPITGASSLRKSTRNVFHVRASYTDE VQRLIQRLAGMGLKGIGVVYLDNGYGREMLEDATRALAALNMKPAVQVAVATDGKNLP QVLQAVAAARPSAVLLATAGTVSVGLVRGIKKESPGVLMAGLSVTLPSASVGQLGEDG SGLALSMIVPDPNRAKLQLVRDYQSAMRAQVKSEFSQGSLEAYVNARVLIEGLDRAGK DVTQPKLRAALAGIRNLDLGGFVVDYSGQAPYVGSRFIDLGVLGSTGRFIA" sig_peptide 71139..71225 /locus_tag="Dtpsy_0065" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 1.000 at residue 29" gene complement(72543..74063) /locus_tag="Dtpsy_0066" /db_xref="GeneID:7382757" CDS complement(72543..74063) /locus_tag="Dtpsy_0066" /EC_number="3.1.2.1" /note="KEGG: ajs:Ajs_0046 acetyl-CoA hydrolase; TIGRFAM: succinate CoA transferase; PFAM: acetyl-CoA hydrolase/transferase" /codon_start=1 /inference="protein motif:TFAM:TIGR03458" /transl_table=11 /product="succinate CoA transferase" /protein_id="YP_002551555.1" /db_xref="InterPro:IPR003702" /db_xref="InterPro:IPR017821" /db_xref="GI:222109291" /db_xref="GeneID:7382757" /translation="MPTSSSPRIQHPGLAQKIMSAAEAAALIPAGANIGMSGFTGAGY PKQVPQALAARIEAEHAAGRPFQVNVWTGASTAPELDGALAKVNGIHQRLPFQSDPIC RDKINAGEVHYLDIHLSHVAQHAWFGFLGPMQVAVVEVLGILPDGRLIPSAAVGNNKT WLEIADKVILEVNSLPPIEMEGMHDIYYGTAIPPRRQPIHLTQATERIGEPYLRVDPS KVIAVVQTHQRDRDTAFAKPDAVSNQIAAHIIDFLAHEVKVGRLPKNMLPLQSGVGNV ANAVLTGLLDGPFDELLGFTEVLQDGMLELIKRGKMTAASATAISLSSEALKDFNEHI AFYRDRIVLRPQEISNHPELVRRLGVIAMNAMIEADIYGNINSTHVMGSAMMNGIGGS GDYARNGYLSFFVTPSVAKGGKVSCIVPMVSHVDHTEHDTQIIVTEQGLADLRGLSPR QRAQVIIDKCAHPDFRPLLQDYFDRARSKGAQHTPHILGEALSWHERCLATGSMLP" gene 74263..74994 /locus_tag="Dtpsy_0067" /db_xref="GeneID:7382758" CDS 74263..74994 /locus_tag="Dtpsy_0067" /note="KEGG: ajs:Ajs_0047 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0047" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551556.1" /db_xref="GI:222109292" /db_xref="GeneID:7382758" /translation="MPFTPLCPSCRQPTEIRRFAASTGGTLELDLCFACQGMWFDPQE NTRLAPAAVLELFELLHQHRGDAHHPLADRLRCPRCSQALAKGYDVAQGGRYVTYRCA ARHGRFSTFGSFMVEKGFVRHLSTMEIEALAERVGTINCTSCGGTVDIRHDHACPYCR SALSLLDPQAVDKALARHGSAARQTAPADAASPDALADALVALERNRAREERARQRER LEGTRSDEFDLLTAGIEMVWSLLRR" gene complement(75130..76416) /locus_tag="Dtpsy_0068" /db_xref="GeneID:7382759" CDS complement(75130..76416) /locus_tag="Dtpsy_0068" /note="TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: ajs:Ajs_0048 uracil-xanthine permease" /codon_start=1 /inference="protein motif:TFAM:TIGR00801" /transl_table=11 /product="uracil-xanthine permease" /protein_id="YP_002551557.1" /db_xref="InterPro:IPR006042" /db_xref="InterPro:IPR006043" /db_xref="GI:222109293" /db_xref="GeneID:7382759" /translation="MALLQWNERPAQVLQGGGVIGPDERLPWAQTGLMGIQHVIAMFG ATVLAPILMGFDPNVAVLMSGIGTLIFFLITGGKVPSYLGSSFAFIGVVIAATAYAGK GPNANIGVALGGIIACGLVYTLVGVVVHLVGTGWIERFMPPVVTGAVVAVIGLNLAGI PIKNMAANNFEAWMQALTFVCVALVAVFTSGMLQRLLILVGLIIASLLYALLTNGMGL GKPIDVSGIANAAWFGLPQFHTPVFEANALLLIVPVVIILVAENLGHIKAVTAMTGKN LDQYMGRAFIGDGVATMVSGAAGGTGVTTYAENIGVMAATRIYSTAVFLVAALLAVLL GFSPKFGALIQAIPLPVMGGVSIVVFGLIAIAGAKIWVDNRVDFSQNKNLIVAAITLI LGTGEFTLKFGDFALGGIGTATFGAIVLYAALNRGK" gene complement(76619..77917) /locus_tag="Dtpsy_0069" /db_xref="GeneID:7382760" CDS complement(76619..77917) /locus_tag="Dtpsy_0069" /note="KEGG: ajs:Ajs_0049 methyl-accepting chemotaxis sensory transducer; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; chemotaxis sensory transducer" /codon_start=1 /inference="protein motif:TFAM:TIGR00229" /transl_table=11 /product="methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor" /protein_id="YP_002551558.1" /db_xref="InterPro:IPR000014" /db_xref="InterPro:IPR000700" /db_xref="InterPro:IPR001610" /db_xref="InterPro:IPR004089" /db_xref="InterPro:IPR013655" /db_xref="InterPro:IPR013656" /db_xref="InterPro:IPR013767" /db_xref="GI:222109294" /db_xref="GeneID:7382760" /translation="MWWQQQRFSAQGRWQAIAEQAAVVEVDVQGVVREVNARFCDLLG YQRAELIGQPQTIFYPPEYVASPAFQANWRRLCGGEFVQGTAQRRCKNGTVVWVQGMF YPVRDARGRVERIVGLVYDVTATQEQTQRAHAILEAIERSMAVIEFDLQGHVLRANDH FLHTMGYTRQNLVGQHHRILCPPAFAQSSDYPRFWDDLRAGVYSKGKIERVDARGRTV WLEATYNPVLDPDGVVSHIVKFATDITARVQQAQAREQGVNTAFAVAQETQQLSEEGT QTIVDATARIQSIAQLFEDTAARVHELGRKTESIAASVQGIRRVADQTNLLALNAAVE AARAGVAGRGFAVVAEEVRKLAGDSRTATNDIHQTIQAVLQEMRAMIDHIQGGVAAVE QGAQLSRQARDAIERIREDAHKVVDVVQELHALETGKPGR" gene complement(78014..79921) /locus_tag="Dtpsy_0070" /db_xref="GeneID:7382761" CDS complement(78014..79921) /locus_tag="Dtpsy_0070" /note="PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: ajs:Ajs_0050 radical SAM domain-containing protein" /codon_start=1 /inference="protein motif:PFAM:PF04055" /transl_table=11 /product="Radical SAM domain protein" /protein_id="YP_002551559.1" /db_xref="InterPro:IPR006638" /db_xref="InterPro:IPR007197" /db_xref="GI:222109295" /db_xref="GeneID:7382761" /translation="MPAALPRVLSVIPPMTQLNTPYPSTAYLTGFLRSRGVPAWQEDL AIALVLRLLSRDGLAQVAERARALPANAQSPAVQSFLAQQERYLATIGPAMAFLQGRD STLAHRIVGRHYLPEGPRFAALDVYEDDGSGDPLGWAFGALGLTDKAKHLATLYLNDL ADVLQGAVDARFEFVRYAEQLAGSQPTFDPLADALAQAPTFVDEVLQQLTHEAVARHQ PGVVLLSVPFPGSVYGAFRIAQAIKARHPHIVTVLGGGFVNTELRELADPRVFDFFDY VTLDAGERPLLALLEHLQGQRGRQRLVRTFVRNDDGAVQYVHLAEPDVAFAEIGTPTW DGLPLQRYLSLLDMLNPMHRLWSDGRWNKLTVAHGCYWKKCSFCDVNLDYIGRYEGAS AQVLADRIAAIVAETGQTGFHFVDEAAPPKALKALAQELIARGTGISWWGNVRFEKTF TPELAELLADAGCIAISGGLEVASDRLLGLMKKGVSVDQVARVTRAFSDAGILVHAYL MYGFPTQTVQDTVDALEYVRQLFENGCIQSGFFHRFACTVHSPVGQNPEEYGVTLAPL PPGGFAKNDVAFIDPTGVDHDALGAGLKKAIYNYMHGIGLEQDVRMWFPFHVPKTTVR PGRIARALAAR" gene complement(80000..81010) /locus_tag="Dtpsy_0071" /db_xref="GeneID:7382762" CDS complement(80000..81010) /locus_tag="Dtpsy_0071" /note="KEGG: dac:Daci_1599 diguanylate cyclase with GAF sensor; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; SMART: GGDEF domain containing protein; GAF domain protein" /codon_start=1 /inference="protein motif:TFAM:TIGR00254" /transl_table=11 /product="diguanylate cyclase with GAF sensor" /protein_id="YP_002551560.1" /db_xref="InterPro:IPR000160" /db_xref="InterPro:IPR003018" /db_xref="GI:222109296" /db_xref="GeneID:7382762" /translation="MDNLLDHLCETVTRARTVEELTRPLLELLEDITGFESTYLTVVD LERGVQRVLYARNTRQMQIPEGLSVPWHDTLCKRALDEGRPFTADVGQCWGDSQAAAA LGIQTYASTPVRMADGQLYGTLCAASDERQELTSQARNALTLFARLIGQQVEREELLQ QLLQANARLAAYAATDALTGLPNRRSLREMLHQQLAQGARQGTAVLIAFMDLDGFKAI NDTYGHEVGDLFLADMADRLRGAARAQDFVARYGGDEFVAVGPGPAPGPALEAARQGF GQRLAQATRGRFGGAGAPIDYAGASVGVIAVLPNGMTADEALREADRAMYAAKKARRA VR" gene complement(81098..82363) /locus_tag="Dtpsy_0072" /db_xref="GeneID:7382763" CDS complement(81098..82363) /locus_tag="Dtpsy_0072" /note="TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: ajs:Ajs_0052 hypothetical protein" /codon_start=1 /inference="protein motif:TFAM:TIGR01988" /transl_table=11 /product="Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family" /protein_id="YP_002551561.1" /db_xref="InterPro:IPR002938" /db_xref="InterPro:IPR003042" /db_xref="InterPro:IPR006076" /db_xref="InterPro:IPR010971" /db_xref="GI:222109297" /db_xref="GeneID:7382763" /translation="MTTQDVSSQRSDVLIVGAGPAGLSLAASLAQAGMQVTVLEQQPA STLAAPLADGREIALTHPSVATLQRIGSWQRLAAHEVGLLREAQVHDGPVGQRGAMQL HAGGSGVQHLGWIVPNHALRRTAYEVAAHTPGVRLVTEARVTRVAVTPAHAELEYTDT RNLDAAPLRLQAPLLVAADSRFSATRRQLGIGAAMHDFGRTVIVCRLRHELPHHEVAH ECFGYEQTLAILPLPGDLVDGAPMCSAVVTTGAAHAQELLALPPEAFAARVQAQFKDR LGAMRLVGERHAYPLVAVYAHRFAAARCALLGDAAVGMHPVTAHGFNLGLAGVDSLTR ALTQARERGADIGAASVLEGYARGHHRHAWPLYQGTNAIVRLYTDDRPLPRLLRQVVL AGANRLPPLKGAIVSQLTGRRPAWPSAAP" sig_peptide complement(82265..82363) /locus_tag="Dtpsy_0072" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.897) with cleavage site probability 0.826 at residue 33" gene 82536..82775 /locus_tag="Dtpsy_0073" /db_xref="GeneID:7382764" CDS 82536..82775 /locus_tag="Dtpsy_0073" /note="KEGG: ajs:Ajs_0053 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0053" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551562.1" /db_xref="GI:222109298" /db_xref="GeneID:7382764" /translation="MRVDIYRRSEAEGRYSHLAVPEGKPIPQEAINTDWNCEHRAVER DETQAHWNDLGIPEPGRQLRDKGYAITSVTEQPRR" gene 82917..85004 /locus_tag="Dtpsy_0074" /db_xref="GeneID:7382765" CDS 82917..85004 /locus_tag="Dtpsy_0074" /note="TIGRFAM: acetoacetyl-CoA synthase; PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_0054 acetoacetyl-CoA synthetase" /codon_start=1 /inference="protein motif:TFAM:TIGR01217" /transl_table=11 /product="acetoacetyl-CoA synthase" /protein_id="YP_002551563.1" /db_xref="InterPro:IPR000873" /db_xref="InterPro:IPR005914" /db_xref="GI:222109299" /db_xref="GeneID:7382765" /translation="METHHNIPPTHPPYTPQIRRYQDWLQAQHGLRFDDYHALWRWST TDLDAFWQSVWDYFDLQSPTPHRAVLAKNVMPGAQWFPGAQVNYARQVLRHVDAAQAA GQPALIGRNERGERRELSWPALRRQVAALALHMRAQGVQPGDRVAAYLPNIPETIVAF LACASIGAVWSLCAPDMGTHAVLDRFRQIAPTVLLAVDGVTYGGRDHDRCDVLAELRA QLPTLRHVVLVSNLDASKTVADTACYASVIARNDAETAAFEPAWLPFDHPLWIVYSSG TTGLPKPIVHGHGGMLLVMLQLAVLHNDIGCSYAPNSLGERYHWYSSTGWIMWNAQVG GLLGGTTCVLYDGNPGGSKERPDWTVLWRMAAEERVTFFGAGAAFYGHCMKAGITPAA CGDLSAIRVLGSTGSPLPAEVQRWGSQLLASAGVPQVWWCNISGGTDFAGAFIGGNRE LPQTPGRMQCRMLGAAVEAWDEQGRPVLDAVGELVCTQPIPSMPLFLWGDADGARYRA SYFEMYPPGHGRRPGGGDLGPEAGAVWRHGDWIEIGSSAHPGCVIYGRSDATINRHGL RMGTSEIYSAVEALPEVLDSLVVDLEYLGRASWMPLFVVLRAGAVLDEALRARIQGAI RSHLSPRFVPDEIVQVAEVPRTLSGKKQELPIKKLLLGQPIEKVVNKDAMANPGCLAW YVEFAAWRQAHAS" gene 85204..85517 /locus_tag="Dtpsy_0075" /pseudo /db_xref="GeneID:7382766" gene complement(85523..86431) /locus_tag="Dtpsy_0076" /db_xref="GeneID:7382767" CDS complement(85523..86431) /locus_tag="Dtpsy_0076" /note="PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bav:BAV1031 LysR-family transcriptional regulator" /codon_start=1 /inference="protein motif:PFAM:PF03466" /transl_table=11 /product="transcriptional regulator, LysR family" /protein_id="YP_002551564.1" /db_xref="InterPro:IPR000847" /db_xref="InterPro:IPR005119" /db_xref="GI:222109300" /db_xref="GeneID:7382767" /translation="MTLKQLEAFYWAAKLGTFAIAAQRLHVTQSSLSKRIAELESDLG QQLFDRTARRSMLTAAGEKLLDKAAAMLDLEREIRADSGPSRDELQGACRVGITELTA TTWFPSLVARVERDFPLLTLEPQVGLSRLIENDVVRGELDVAILAGPVNRPELRGRAV ADIEFIWTSAPVRLPHRTVLQTEHFEAHPVINNPHDSGLSATFESWANTHRIRIGKTI QCNSRAAIIALTIAGVGISFQPRRYVQPLLERGLLVPLESAAPLPRQPYNLVWRADDD RRIVEAIVALVQEEADFDADNLFWGN" gene complement(86480..87709) /locus_tag="Dtpsy_0077" /db_xref="GeneID:7382768" CDS complement(86480..87709) /locus_tag="Dtpsy_0077" /note="PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mrd:Mrad2831_3262 L-carnitine dehydratase/bile acid-inducible protein F" /codon_start=1 /inference="protein motif:PFAM:PF02515" /transl_table=11 /product="L-carnitine dehydratase/bile acid-inducible protein F" /protein_id="YP_002551565.1" /db_xref="InterPro:IPR003673" /db_xref="GI:222109301" /db_xref="GeneID:7382768" /translation="MKTDPSSFKNGPLQGVRIIDATTVVLGPYATRILADMGAEVIKI ETSSGDQTRHYKPLRHEGMAGYFINLNRNKRSVSLDLKSPEGMEVLKRLLKGANAFIH NMRQQAADRLGLGYEAVRALNPDIVYCAAVGFGSAGPYSGRAAYDDVIQAGSGIAGLF AQVHGQPMFAPTVLCDKITGHTVAYAVVAALLQQAKGGGGQAVEVPMLETSAEFALVE HLHAATFDPPLGEIGFKRVMSKFRKPYRTRDGFMCILPYSDSNWADFFRFTGRTELLD DERFRVLADRVQHIDELYAVVEKEAPRFTNAEWEAFCNRVSIPCMPVRDLEGVLQDEH LQAVGMFQPATHPTEGDYRVVRSPVQFAEPFRLRHHAPRLGQDTINVMRDAGYSDAEI DSLVAKGAVLAAPPVAE" gene complement(87722..88813) /locus_tag="Dtpsy_0078" /db_xref="GeneID:7382769" CDS complement(87722..88813) /locus_tag="Dtpsy_0078" /note="PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: mrd:Mrad2831_3261 acyl-CoA dehydrogenase domain-containing protein" /codon_start=1 /inference="protein motif:PFAM:PF00441" /transl_table=11 /product="acyl-CoA dehydrogenase domain protein" /protein_id="YP_002551566.1" /db_xref="InterPro:IPR006090" /db_xref="InterPro:IPR013107" /db_xref="GI:222109302" /db_xref="GeneID:7382769" /translation="MSERDELTAMVNEQADRQFRELLTPEAMEQTSTGQWLPALWQQM EDAGWPSALVAEAQGGVGLPSSAAFDVIRLSAHWGVPLPLAETMAGRGLWTAVGGDPD LVADRPVLLGVGAQARAPALRLDGECSLTGETGSVNFGEAPGALLLVQAHMRDDAHAL VLLDVQKLAPRSVRTLSFEAQCAFSLGSVPVPTDYCQPWDVRDPRALQAVGAVLRSVQ MVGAMQRCLALGLQYSQERVQFGRPISRFTPVQDMLVEAAAEVSAAVNAASLAVDHWQ PAPTPDGVFAAAVAKSRCGEAAGKVAAFIHQVHGAMGFTQEHVLHQFTRRLWAWRDEF GTEAYWNHQIGTRVCAADGHSLWPLLTAL" gene complement(88810..89952) /locus_tag="Dtpsy_0079" /db_xref="GeneID:7382770" CDS complement(88810..89952) /locus_tag="Dtpsy_0079" /note="PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mrd:Mrad2831_3260 acyl-CoA dehydrogenase domain-containing protein" /codon_start=1 /inference="protein motif:PFAM:PF00441" /transl_table=11 /product="acyl-CoA dehydrogenase domain protein" /protein_id="YP_002551567.1" /db_xref="InterPro:IPR006089" /db_xref="InterPro:IPR006090" /db_xref="InterPro:IPR006091" /db_xref="InterPro:IPR006092" /db_xref="GI:222109303" /db_xref="GeneID:7382770" /translation="MFEFNQPPDLSVCEPTRQRVRAFLAAEVERGSFKPWEVTWTTFD RGFSRRAGTAGLIGMTWPRAYGGQDATALERYVVVEEMLAAGAPCGAHWIADRQSGPQ ILRHGSERAKQDILPRIARGECAFGIGMSEPDSGSDLAAVRTRATRVEGGWRINGTKV WTTNAHQVDYLITLVRTAEPGAGKHEGLTQMITATGQPGITVRPIRDLSGHHEFNEVH FEDYFVPDDMLIGEPGSGWRMVTAELAYERSGPDRFLSAWQLLAALVDAVGHEPDAQQ AVQIGRLVAHAATLRRMSTGIAGLLERGANPQVEAALVKHVGTGFEREIPEIARLLVD AGQQSEAGQRFADALRHVTLAAPSFTLRGGTREILRGVIARGMGLR" gene complement(89962..90762) /locus_tag="Dtpsy_0080" /db_xref="GeneID:7382771" CDS complement(89962..90762) /locus_tag="Dtpsy_0080" /note="PFAM: Enoyl-CoA hydratase/isomerase; KEGG: swi:Swit_3272 enoyl-CoA hydratase" /codon_start=1 /inference="protein motif:PFAM:PF00378" /transl_table=11 /product="Enoyl-CoA hydratase/isomerase" /protein_id="YP_002551568.1" /db_xref="InterPro:IPR001753" /db_xref="GI:222109304" /db_xref="GeneID:7382771" /translation="MSGFLSIDRRDGVVVATMNRPDERNALTEEHQMLEFVELCAQIR RDPGVTALVLTGAGSAFSAGGNLKNMRDKKGFSAGSPADIRDAYRNGIQQIPLALYEV DVPTIAAVNGPAIGAGLDLACMCDIRLASEQATFASSFVKLGIVPGDGGAWLLARTIG QPKAMEMMLTGDTFDAARALALGLVSRVIPPEELMPQALDLAARISANPSRTVRLTKR LLRESDSVSLASSLEMAAAYQALAHYTSDHDEAVRAFLEKRKPVFTGR" gene 90968..91948 /locus_tag="Dtpsy_0081" /db_xref="GeneID:7382772" CDS 90968..91948 /locus_tag="Dtpsy_0081" /note="PFAM: conserved hypothetical protein; KEGG: atc:AGR_pAT_473 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF03401" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551569.1" /db_xref="InterPro:IPR005064" /db_xref="GI:222109305" /db_xref="GeneID:7382772" /translation="MFRTSIHRSILAAAAALLAGLAATPAHAAWPSDAPINITVGFAA GGTTDVMVRNLAPFIAKHLGDNASFVIQNRPGASGEIAINSVMRAKPDGYSLVVVNLP GYFFVPMYRKSSYTTKDLTLVARLVGDPTIMVTRKDSKLIDLRQVVSQLKTDPSSYSA GHNGLGTNGHLAMAQLENAASVKFNSIPFNGSAQQKAALTTSTLDIAFLAASEVPDPE NEATPVRLLAQFTKDKVQRIASTPTTFEVGFPVEMTAERGIAAPNGVPAAIRARLEKA IEAALKDPEYVKTARNDAPFLSFLGGAEWAKAVEQAQKAYEPIARTLPKE" sig_peptide 90968..91054 /locus_tag="Dtpsy_0081" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 1.000 at residue 29" gene 92017..92358 /locus_tag="Dtpsy_0082" /pseudo /db_xref="GeneID:7382773" gene 92416..93039 /locus_tag="Dtpsy_0083" /db_xref="GeneID:7384315" CDS 92416..93039 /locus_tag="Dtpsy_0083" /note="TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: ajs:Ajs_0064 CDP-diacylglycerol--serine O-phosphatidyltransferase" /codon_start=1 /inference="protein motif:TFAM:TIGR00473" /transl_table=11 /product="CDP-diacylglycerol/serine O-phosphatidyltransferase" /protein_id="YP_002551570.1" /db_xref="InterPro:IPR000462" /db_xref="InterPro:IPR004533" /db_xref="GI:222109306" /db_xref="GeneID:7384315" /translation="MASPHKRFSMIREFHLADWFTLGNAVCGVGALFSSMTYLETSDV RHVYFACALVLAALVFDVLDGRIARWRQKSSAMGRELDSLADVISFGVAPAIIAYACG MQGLYDRVVLAFFVACGVSRLARFNITAETLAEGPSGKVKYFEGTPIPTSIVLVGLMA VAASVGAVRGQLWLGSVTIGGFTLHPLVLLFALSGSLMISRIRIPKF" gene 93269..94036 /locus_tag="Dtpsy_0084" /db_xref="GeneID:7384316" CDS 93269..94036 /locus_tag="Dtpsy_0084" /note="TIGRFAM: septum site-determining protein MinC; PFAM: Septum formation inhibitor MinC; KEGG: ajs:Ajs_0065 septum site-determining protein MinC" /codon_start=1 /inference="protein motif:TFAM:TIGR01222" /transl_table=11 /product="septum site-determining protein MinC" /protein_id="YP_002551571.1" /db_xref="InterPro:IPR005526" /db_xref="InterPro:IPR013033" /db_xref="GI:222109307" /db_xref="GeneID:7384316" /translation="MAVDTAGQARTHLDLKSAQLPVVAMVLKTTDVASIAAELAARRA DDPEFFDNDPVLIDLSAVQDEPQPIDFAALVKTLRSHRTQPVAVRGGSSAQRQDAHDA GLIAAPDAPPPRMQAPRENTPREVVHEVIREVEVVREVPVPAPAPGTVVVDKPLRSGQ QVYARGSDLVVMAVVSFGAEVIADGNIHVYAPLRGRAIAGARGDTSARIFSTCMEPQL VSVAGIYRTTETELPDNVRGKPAQVRLDGEKLLIEPL" gene 94090..94905 /locus_tag="Dtpsy_0085" /db_xref="GeneID:7384317" CDS 94090..94905 /locus_tag="Dtpsy_0085" /note="TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid ac-diamide synthase; KEGG: ajs:Ajs_0066 septum site-determining protein MinD" /codon_start=1 /inference="protein motif:TFAM:TIGR01968" /transl_table=11 /product="septum site-determining protein MinD" /protein_id="YP_002551572.1" /db_xref="InterPro:IPR002586" /db_xref="InterPro:IPR010223" /db_xref="GI:222109308" /db_xref="GeneID:7384317" /translation="MAKIVVVTSGKGGVGKTTTSAAFASGLALAGHKTAVIDFDVGLR NLDLIMGCERRVVYDLINVIQGEANLNQALIKDKQCENLFVLAASQTRDKDALTQDGV GKVLKDLADMGFDYIVCDSPAGIESGALMAMHFADEALLVTNPEVSSVRDSDRILGML SSKTKRAIEGGEPVKEHLLITRYNPHRVEDGQMLSLEDIQDILRIKLIGVIPESESVL QASNQGLPAIHLSGTDVSEAYKDVVARFLGEDKPLRFIEAAKPGFFKRIFGGR" gene 94911..95177 /locus_tag="Dtpsy_0086" /db_xref="GeneID:7384318" CDS 94911..95177 /locus_tag="Dtpsy_0086" /note="TIGRFAM: cell division topological specificity factor MinE; PFAM: Septum formation topological specificity factor MinE; KEGG: ajs:Ajs_0067 cell division topological specificity factor MinE" /codon_start=1 /inference="protein motif:TFAM:TIGR01215" /transl_table=11 /product="cell division topological specificity factor MinE" /protein_id="YP_002551573.1" /db_xref="InterPro:IPR005527" /db_xref="GI:222109309" /db_xref="GeneID:7384318" /translation="MSLLSFLLGEKKKTASVAKERLQIILAHERSGRSAGQPDYLPAL QRELVAVISKYVKINADDLKVHFERQDDLEVLEVKIELPEATAK" gene complement(95254..95814) /locus_tag="Dtpsy_0087" /db_xref="GeneID:7384319" CDS complement(95254..95814) /locus_tag="Dtpsy_0087" /note="PFAM: flavin reductase domain protein FMN-binding; KEGG: ajs:Ajs_0068 flavin reductase domain-containing protein" /codon_start=1 /inference="protein motif:PFAM:PF01613" /transl_table=11 /product="flavin reductase domain protein FMN-binding" /protein_id="YP_002551574.1" /db_xref="InterPro:IPR002563" /db_xref="GI:222109310" /db_xref="GeneID:7384319" /translation="MNSRLPHPPSSQPPVFTPREFRDALGMFATGVTIVTARGEGGAL IGMTANSFNSVSLEPPLVLWSLGHKTSSLPAFSRATHYAINVLTVEQRALAEQFATRG IDRFAGVAYRLGRSGVPVLDGAAAVFECFNRSQYVEGDHTIFVGQVERCSHREGASPL LYHGGVFYTEHPLGSLSATVARPMEK" gene 95923..96705 /locus_tag="Dtpsy_0088" /db_xref="GeneID:7384320" CDS 95923..96705 /locus_tag="Dtpsy_0088" /note="PFAM: alpha/beta hydrolase fold; KEGG: ajs:Ajs_0069 alpha/beta hydrolase fold" /codon_start=1 /inference="protein motif:PFAM:PF00561" /transl_table=11 /product="alpha/beta hydrolase fold protein" /protein_id="YP_002551575.1" /db_xref="InterPro:IPR000073" /db_xref="InterPro:IPR000639" /db_xref="InterPro:IPR003089" /db_xref="GI:222109311" /db_xref="GeneID:7384320" /translation="MSLLPRFSLLGSGPTVLLLHDADGDHLGFAPTLETLAAAGYRAV AWDMPGYGGSAPVEPYNFKGLAQRALLLLDALRCEQVVLVGHGLGAMLALEIAVRAPL RVRRLVLCAGGPALDEAATAVWVAPRLAGLDDGRDMARLADPTVARDAGPGALPEGLQ LARHAMGRVPPATYRRALEALTAFARRAPELVRLQVPALLVGGEYDRCTPPEALLALA HVLPDARAVLLPGVGHWPQLEDPEGFEAALLDFLAGPAPVLH" gene 96844..98034 /locus_tag="Dtpsy_0089" /db_xref="GeneID:7384321" CDS 96844..98034 /locus_tag="Dtpsy_0089" /note="PFAM: Extracellular ligand-binding receptor; KEGG: ajs:Ajs_0070 extracellular ligand-binding receptor" /codon_start=1 /inference="protein motif:PFAM:PF01094" /transl_table=11 /product="Extracellular ligand-binding receptor" /protein_id="YP_002551576.1" /db_xref="InterPro:IPR000709" /db_xref="InterPro:IPR001828" /db_xref="GI:222109312" /db_xref="GeneID:7384321" /translation="MMAMRPRHWAGALALWALAGMAGAQPVKVGVIGPFSGPSSDFGT PMLQGIQLAVEQFNAVGGYLGRPVELVVKDDQGSPDTGRQRSQELAKEGVVAALGFCN TGVAMKSLDVFQQAKLPLIVPCATGTPVTRTYPAAQSFIFRTSAPDNIQAPFVVEDIL RRGWTRVALFADDTGYGQAGRKDVEAALAAHQLTPVYATNFPLGVKSLAPQLQAARDA GAQVIFSYTVGPENAVIAQGRKELGWKVPQVGGWTLSFPFFIQGGKDAAEGALTAQTF IAEPSNERRASFLSTYARAFKGRPAVPMAAAQGYDAAYLLMYALLGIRDGQVNGPALK HSLENLQRVYYGVVATYERPFSAEEKEAITPNMLVMGKVQAGAVTFAYPEDAKRNLLV QRKR" sig_peptide 96844..96918 /locus_tag="Dtpsy_0089" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.990 at residue 25" gene complement(98047..99387) /locus_tag="Dtpsy_0090" /db_xref="GeneID:7384322" CDS complement(98047..99387) /locus_tag="Dtpsy_0090" /EC_number="1.4.99.1" /note="PFAM: FAD dependent oxidoreductase; KEGG: ajs:Ajs_0071 D-amino-acid dehydrogenase" /codon_start=1 /inference="protein motif:PRIAM:1.4.99.1" /transl_table=11 /product="D-amino-acid dehydrogenase" /protein_id="YP_002551577.1" /db_xref="InterPro:IPR006076" /db_xref="GI:222109313" /db_xref="GeneID:7384322" /translation="MKTIVLGAGIIGISTAWHLRERGHEVTVVDRQPDAALETSFANA AQISVSYCEPWANREAPWKALKWMFDKEAPLLFRPQLDWEQWRWCLKFLAQCNDTAFA RNVQQIVALGAYSHAALKDIVRATGIEYHRLERGIAHFYTDQKSFDDAAHAVELMRRF GVQRRVVSRDELLAIEPAFHAYGDRITGGTYTSTDESGDARVFTQALARRCAERGVQF LYGHDVLRLNRSGDAIESIAIRARQESATGQKDQILKADAVVVACGSYSAPLLRGVGV HLPIYPGKGYSATFPLLKPEGAPMVSTIDDGKKIAMSRLGNVLRVAGTIELGGYDLSL DSPVARARCHMLSRRIETILPGVCDTRTPEEGGDPQYWTGLRPATPTNIPFIGRTPLH GLWVNAGHGTLGWTHGAGSGKAMAELLSGERPAMDFAFLGDDTPAAAYGAPRLA" gene 99475..100386 /locus_tag="Dtpsy_0091" /db_xref="GeneID:7384323" CDS 99475..100386 /locus_tag="Dtpsy_0091" /note="TIGRFAM: transcriptional regulator, ArgP family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_0072 chromosome replication initiation inhibitor protein" /codon_start=1 /inference="protein motif:TFAM:TIGR03298" /transl_table=11 /product="transcriptional regulator, ArgP, LysR family" /protein_id="YP_002551578.1" /db_xref="InterPro:IPR000847" /db_xref="InterPro:IPR005119" /db_xref="InterPro:IPR017685" /db_xref="GI:222109314" /db_xref="GeneID:7384323" /translation="MSTFDPAALECLAAIVEEGGFERAARRLNITQSAVSQRLRALEA QVGSVLIVRSRPLKPTSAGQLLLKHTKQLRLLRADLERDLQDLMPSGRGGGREEERIA IAINADSIATWAVDALGDLVRQRLPLEIIADDQDFTQEWLRSGQVMGCVTTLKSALRG CRMVPLGAMQYVAVAAPELARRQLPQGLTAHNFRDVPFVSFNRKDDMQAEFVTRTFGL KRVSLSRVFVPSSEGQVRAVAAGWGVSVVPELLARPWLQQGRLVDLAPGHTLPIQLYW HSWNLESEVLDALADALTSAAAQYLSA" gene 100457..101089 /locus_tag="Dtpsy_0092" /db_xref="GeneID:7384324" CDS 100457..101089 /locus_tag="Dtpsy_0092" /note="PFAM: regulatory protein TetR; KEGG: ajs:Ajs_0073 TetR family transcriptional regulator" /codon_start=1 /inference="protein motif:PFAM:PF00440" /transl_table=11 /product="transcriptional regulator, TetR family" /protein_id="YP_002551579.1" /db_xref="InterPro:IPR001647" /db_xref="GI:222109315" /db_xref="GeneID:7384324" /translation="MNTLQPPRPSFKEQMLRAREDAIVEAASRLLGEKGFETMTVDEV AAAVGIAKASLYKHFAGKDDLCSAAMVHVVERLQRFLAALPAELGAMQRLHALLCWTL QLQLADEVPLLPSRNSALAQALRACDAYQASMQEVHACILGWIVEAQAQGQLRRELPP DVILCALLARNSDPMLGMLRDRGYADECIIDWAADTCLSGLASGPAMRAA" gene complement(101090..101512) /locus_tag="Dtpsy_0093" /db_xref="GeneID:7384325" CDS complement(101090..101512) /locus_tag="Dtpsy_0093" /note="PFAM: UspA domain protein; KEGG: ajs:Ajs_0074 UspA domain-containing protein" /codon_start=1 /inference="protein motif:PFAM:PF00582" /transl_table=11 /product="UspA domain protein" /protein_id="YP_002551580.1" /db_xref="InterPro:IPR006015" /db_xref="InterPro:IPR006016" /db_xref="GI:222109316" /db_xref="GeneID:7384325" /translation="MNILLAVDGSTYTKKMLAYLAAHDEMLGSSHTYTAITVQPQLPP RARAALGKEVVDKYHAEEGEKVLSPVVKFMARQGVQLKTMTKVGPAGETIAKVAESGK YDLVVMGTHGHGSLGKLVMGSVSTQVLANCQVPVLLVR" gene complement(101625..102470) /locus_tag="Dtpsy_0094" /db_xref="GeneID:7384326" CDS complement(101625..102470) /locus_tag="Dtpsy_0094" /note="PFAM: metallophosphoesterase; KEGG: ajs:Ajs_0075 metallophosphoesterase" /codon_start=1 /inference="protein motif:PFAM:PF00149" /transl_table=11 /product="metallophosphoesterase" /protein_id="YP_002551581.1" /db_xref="InterPro:IPR004843" /db_xref="GI:222109317" /db_xref="GeneID:7384326" /translation="MKLQLLSDLHLEAHPHFTPSPAVGADVLVLAGDIGSYQAGSLLS DDDFGLARFSPLPQYAGWPTPVVFVPGNHEYDMQDFDAAHARLRRICDRLGLIWLERE SMVLQGVRFVGTTLWSDFDALADHAGITDPGQRLQRREKAFRAANFYLSKTGSTRQGV PFLAAEVREQALVCQAWLRNALAQPFAGTTVAVTHFAPSLLSADPRYGLVPGTAGFCN ALDDCLPHAQLWLHGHLHAPSDYLVRGARADGAPWSCRIVANPLGYARKGEQATFQPH CVLTV" gene complement(102487..103458) /locus_tag="Dtpsy_0095" /db_xref="GeneID:7384327" CDS complement(102487..103458) /locus_tag="Dtpsy_0095" /note="PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_0076 LysR family transcriptional regulator" /codon_start=1 /inference="protein motif:PFAM:PF03466" /transl_table=11 /product="transcriptional regulator, LysR family" /protein_id="YP_002551582.1" /db_xref="InterPro:IPR000847" /db_xref="InterPro:IPR005119" /db_xref="GI:222109318" /db_xref="GeneID:7384327" /translation="MQPLNFRTLDLNLLRVFDEVMAERNLTRAAEKLAITQPAVSNAL RRLREVLGDELVTRRGHGVEPTPRALALWPAVRHALAQLQETLSPGRFDPASAQTTFV LAMADATGATLIPPLIEIVEREAPGVSLRVVPLTTRDPRRLLDDESADMAVGYFPSVL ADLTARAQSDNVVAHESTRLYDGQYVCVMRADHPLAAVPMTLDLYCAARHLLVSFSGK PFGFIDGALAALGRERRIVLTVNQFFTAGRVVATTDLLTVLPRHFVGVASVRDELVWR PLPMTLPPVHVDALWHRRRNHDPAHRWLREAIARAARNTPAPIHRQD" gene 103582..104022 /locus_tag="Dtpsy_0096" /db_xref="GeneID:7384328" CDS 103582..104022 /locus_tag="Dtpsy_0096" /note="KEGG: ajs:Ajs_0077 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0077" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551583.1" /db_xref="GI:222109319" /db_xref="GeneID:7384328" /translation="MTKFVHIDVPVQHHGIARIEEAASHLKQTVARFDGTRGATSLLL AALVAALLVVANQVMDTWNDGHMLAGWMVMWVIAFAGMALLAAPARSAVLGLRAAAKA WSDAHRRAAEDERTWNAALRDARIMADLSRAMNGIAVDDLRRYR" gene complement(104202..106073) /locus_tag="Dtpsy_0097" /db_xref="GeneID:7384329" CDS complement(104202..106073) /locus_tag="Dtpsy_0097" /EC_number="4.1.1.32" /note="PFAM: phosphoenolpyruvate carboxykinase (GTP); KEGG: ajs:Ajs_0078 phosphoenolpyruvate carboxykinase" /codon_start=1 /inference="protein motif:PRIAM:4.1.1.32" /transl_table=11 /product="Phosphoenolpyruvate carboxykinase (GTP)" /protein_id="YP_002551584.1" /db_xref="InterPro:IPR008209" /db_xref="GI:222109320" /db_xref="GeneID:7384329" /translation="MNAPTMPVLDIQAPAYVKNAKLIAWVAEMAALCKPARIHWCDGS QQEYEQLCQQLVDAGTFKKLNPAKRPGSYLAWSDPSDVARVEDRTYICSEKKEDAGPT NNWMAPAEMRATLQPLFDGCMAGRTMYVVPFSMGPLGSHIAHIGIELTDSAYVAVNQK LMTRMGKAVYDVLGTDGEFVPCMHTVGAPLAAGQKDTTSWPCNPQVKYIVHYPETREI WSYGSGYGGNALLGKKCLALRIASTMGRDQGWLAEHMLILGVTNPEGKKYHVAAAFPS ACGKTNFSMLVPPEAGFAGWKVTTIGDDIAWIKPHADGKMYAINPEAGYFGVAPGTNM HTNPNCMRSLDKDVIFTNVALTDDGDVWWEGMEKDTGKLPDHLIDWQGKDWTPQIAKE TGAKAAHPNSRFTVAATNNPALDPEWDNPAGVAIDAFIFGGRRSTTVPLVTEARSWME GVYMAATMGSETTAAAFGAQGVVRRDPFAMLPFCGYNMSDYFQHWLDMEHKLEESGHQ LPKIFCVNWFRKGEDGKFVWPGYGDNMRVLKWMLDRIEGTAQGEPTMFGIAPQYAEIN WTGLDFSTEQFKMVTSIDKAAWAEELKLHTEHFDKLAYHLPQELLATKAALEKRLAA" gene complement(106408..106569) /locus_tag="Dtpsy_0098" /db_xref="GeneID:7384330" CDS complement(106408..106569) /locus_tag="Dtpsy_0098" /note="KEGG: ajs:Ajs_0079 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0079" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551585.1" /db_xref="GI:222109321" /db_xref="GeneID:7384330" /translation="MAHDHPIAPNAADVEAATATDAAESVVHLIPVVIPAVGAAMIFL LAFIAVYMA" gene complement(106677..107876) /locus_tag="Dtpsy_0099" /db_xref="GeneID:7384331" CDS complement(106677..107876) /locus_tag="Dtpsy_0099" /note="TIGRFAM: threonine dehydratase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; amino acid-binding ACT domain protein; KEGG: ajs:Ajs_0080 threonine dehydratase" /codon_start=1 /inference="protein motif:TFAM:TIGR01127" /transl_table=11 /product="threonine dehydratase" /protein_id="YP_002551586.1" /db_xref="InterPro:IPR001926" /db_xref="InterPro:IPR002912" /db_xref="InterPro:IPR005789" /db_xref="GI:222109322" /db_xref="GeneID:7384331" /translation="MLTFQDIQHAAERLRGQVLETPCVESRTLSQIVGAQVFLKFENL QFTASFKERGACNKLSQLTPQERERGVVAMSAGNHAQGVAYHAQRLGLRAVIVMPRFT PGVKVERTRGFGAEVVLHGDTLEEARQHAYQLAEQQGLTFVHPYDDEAVAAGQGTLVL EMLAAQPDLDALVVSVGGGGLLAGMATAARAIKPNLEIIGVQTARFPAMVNAIKGTHH AQGASTIAEGIAVGQPGKMTQEVIGRLVDDLLLVDEGDIEQAVLMLLEIEKTLVEGAG AAGLAALVRHPERFRGKKVGLVLSGGNIDPLLLAAIIERGMVRSGRLARIMVSARDVP GVLARITALVAEAGANIEEVHHQRAFTVLAAQNVEIELVLQTRGKAHIQQVLDLLRAA QMEAELR" gene complement(107988..109643) /locus_tag="Dtpsy_0100" /db_xref="GeneID:7384332" CDS complement(107988..109643) /locus_tag="Dtpsy_0100" /note="PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ajs:Ajs_0081 acyl-CoA dehydrogenase domain-containing protein" /codon_start=1 /inference="protein motif:PFAM:PF00441" /transl_table=11 /product="acyl-CoA dehydrogenase domain protein" /protein_id="YP_002551587.1" /db_xref="InterPro:IPR006089" /db_xref="InterPro:IPR006090" /db_xref="InterPro:IPR006091" /db_xref="InterPro:IPR013107" /db_xref="GI:222109323" /db_xref="GeneID:7384332" /translation="MDWTTHQVFNQYPELNDYHPLATDAALCEAVERAGADWARPALD TYAARLGMAETYALAEQANRHTPQLQRFDTRGRRIDALEFHPAWHQLMALYRGEGLIS RPFQDERPGRWAAWAAGFYLHGQVEQGTLCPATMTQAAIPLLRKEPALWQSLQSRLYS TVYDPRDLPVADKASIWLGMGMTEKQGGSDVRANTTVAAPIGTGGRGGEYRLRGHKWF FSAPQCDAHLVVARTGEGGPFACFYVPRWRPDGSRNAVRVQRLKDKVGNRSNASSEVE FEDAWGLLMGEEGRGIPTIIEMASYTRLNCVVGSAAILRQATVQAIHYAHRRHAFGKA LAEQPLMRAVLADLALESEAALHLAMRLAQAYEDDDAPAQRAWKRVMTPAAKFWVCKR AVELTGEAMEVLGGNGYVEDGVMARLFREAPVNSIWEGSGNVMCLDVLRALQREPEAA HALLTELHAAAQGEPRIAAAARELQALLATPAEQLEGLGRVLTQRLVLLAQACLLRQQ APAAVADAFIATRLADSGAGRVAGAIDTRGLDVAAVLARAFPG" gene complement(109796..110458) /locus_tag="Dtpsy_0101" /db_xref="GeneID:7384333" CDS complement(109796..110458) /locus_tag="Dtpsy_0101" /note="KEGG: ajs:Ajs_0082 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0082" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551588.1" /db_xref="GI:222109324" /db_xref="GeneID:7384333" /translation="MQPSPRTSFPATPRRATATLALCVAACLAVTGCATPPPPPVAPD PALDARARYDADLQDCRDRAQQVGVLSETLDAVVQGALVAAFLAWGLGRSDTGVRDWA LTGGALAGGSQGLQALERRRQLVAHCMAVRGHRISPLAVAGPQPGAAPSVPVAPAAPP RPSGADAYSAERLAREQACHAQPVAALAAKGPGFETYSVPCSNGDALAIRCEFGNCRV LR" sig_peptide complement(110354..110458) /locus_tag="Dtpsy_0101" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.997) with cleavage site probability 0.731 at residue 35" gene complement(110506..111540) /locus_tag="Dtpsy_0102" /db_xref="GeneID:7384334" CDS complement(110506..111540) /locus_tag="Dtpsy_0102" /note="PFAM: homocysteine S-methyltransferase; KEGG: ajs:Ajs_0083 methionine synthase (B12-dependent)" /codon_start=1 /inference="protein motif:PFAM:PF02574" /transl_table=11 /product="homocysteine S-methyltransferase" /protein_id="YP_002551589.1" /db_xref="InterPro:IPR003726" /db_xref="GI:222109325" /db_xref="GeneID:7384334" /translation="MTLPHYTRAQALPAILEQRIAILDGAMGTMIQRFKLTEAQYRGE RFKDFARDVKGNNELLSLTRPDVIRDIHEGYLAAGADLIETNTFGATSIAQDDYGLAE LAYEMNLESAKLARAACDKFSTPDKPRFVAGALGPTPKTASISPDVNDPGARNITFEQ LRAAYHEQARGLIEGGADVLLVETIFDTLNAKAALFAIDEVFEETGECLPIMISGTVT DASGRILSGQTVTAFWHSVRHARPLSIGLNCALGAALMRPYIQELNRAAPDTFISCYP NAGLPNPMSDTGFDETPEVTSRLVHEFAAEGLVNIVGGCCGTTPDHIGAIARAVAPVG TRRLFQTEAA" gene 111704..113575 /locus_tag="Dtpsy_0103" /db_xref="GeneID:7384335" CDS 111704..113575 /locus_tag="Dtpsy_0103" /note="KEGG: ajs:Ajs_0084 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; Helicase superfamily 1 and 2 ATP-binding; SMART: helicase domain protein; HRDC domain protein; DEAD-like helicases" /codon_start=1 /inference="protein motif:TFAM:TIGR01389" /transl_table=11 /product="ATP-dependent DNA helicase RecQ" /protein_id="YP_002551590.1" /db_xref="InterPro:IPR001650" /db_xref="InterPro:IPR002121" /db_xref="InterPro:IPR004589" /db_xref="InterPro:IPR006293" /db_xref="InterPro:IPR011545" /db_xref="InterPro:IPR014001" /db_xref="InterPro:IPR014021" /db_xref="GI:222109326" /db_xref="GeneID:7384335" /translation="MSPAHFVLHDVFGYEQFRGPQQAIIDHVIAGGDALVLMPTGGGK SLCYQVPAIVRRDAGLGVTVVVSPLIALMHDQVGALHEAGVEAAFLNSTLDWQQTQDV ERRLARGEITLLYAAPERVTTDRFLTLLDGLHARGQLGLFAIDEAHCVSQWGHDFRPE YRQLAVLHERYAGVPRIALTATADALTREDIVQGLRLQQARQFVSSFDRPNIRYRIEE KKEPLTQLMRFIDREHLGEAGVVYCQSRKRVEELAQALCDAGLTALPYHAGLPAEVRQ QNQDRFLREDGIVMVATIAFGMGIDKPDVRFVAHVDMPKNIEGYYQETGRAGRDGLPA DAWMAYGLQDVVNQRRMIDESPAGEEFKAVMRGKLDALLALAEATDCRRVRLLGYFGE ASEPCGNCDNCLNPPAVWDGTDAARKLLSTIYRVHEASGLTFGTGHIMDILRGKATDK VQQFGHEKLSTFGLGAQYSEAQLRGVLRQLLAAGAVGLHKVTTEGGHSFDTLALTEGS RPVLRGEQSVLLREATAAAGPKKPRRASAPPVAAANLGQDAQVRFINLKAWRAEVARE HNLPAYVIFHDATLAAIAERNPATLEDLQGISGMGAKKLEAYGAEVLRVCGAGAAAG" gene complement(113493..114263) /locus_tag="Dtpsy_0104" /db_xref="GeneID:7384336" CDS complement(113493..114263) /locus_tag="Dtpsy_0104" /note="TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; PFAM: Radical SAM domain protein; KEGG: ajs:Ajs_0085 anaerobic ribonucleoside-triphosphate reductase activating protein" /codon_start=1 /inference="protein motif:TFAM:TIGR02495" /transl_table=11 /product="anaerobic ribonucleoside-triphosphate reductase activating protein" /protein_id="YP_002551591.1" /db_xref="InterPro:IPR007197" /db_xref="InterPro:IPR012840" /db_xref="GI:222109327" /db_xref="GeneID:7384336" /translation="MPARTSHTAAQALRIGGITPLTTIDFPGRLAAVVFCQGCPWRCG YCHNAGLLDAAAPAPHRWSEVEQLLHTRRGLLDGVVFSGGEPTLQAALPDALARVRAL GFATGLHTAGMYPERLQALLPLLDWVGLDIKGPLAHYDAITRTPGSGDRAWESLRCVQ ASGVNYECRTTWHAGLFDTAALRALAEDLAAQGVRQWVLQECSTPASVPWCRTAPPHA VAAAHQPAVRLISRPRPRRRTPAALRRRTPPAFSHPCR" gene complement(114253..114444) /locus_tag="Dtpsy_0105" /db_xref="GeneID:7384337" CDS complement(114253..114444) /locus_tag="Dtpsy_0105" /note="KEGG: ajs:Ajs_0086 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0086" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551592.1" /db_xref="GI:222109328" /db_xref="GeneID:7384337" /translation="MTHFSATENTALATAVQLTDAERQPCEVWTRVMGYHRPVASFNT GKQGEHNERQFFAEPGRAC" gene complement(114535..116562) /locus_tag="Dtpsy_0106" /db_xref="GeneID:7384338" CDS complement(114535..116562) /locus_tag="Dtpsy_0106" /note="TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; PFAM: ATP-cone domain protein; KEGG: ajs:Ajs_0087 anaerobic ribonucleoside triphosphate reductase" /codon_start=1 /inference="protein motif:TFAM:TIGR02487" /transl_table=11 /product="anaerobic ribonucleoside-triphosphate reductase" /protein_id="YP_002551593.1" /db_xref="InterPro:IPR005144" /db_xref="InterPro:IPR012833" /db_xref="GI:222109329" /db_xref="GeneID:7384338" /translation="MTPPSPIVASLPRDVIQRNGERTPFDAVRIQSAIARAGQATGEF GEDEARLLTAQATKVLIHRFHGEAPAIEQIQDVVEQTLIAANHLQTARAYMAYRQRHA TLRADRQTLVHVESSINEYLTRADWRVNANANQGYSLGGLILNVAGKVTANYWLSHVY APEIGEAHRNGDIHIHDLDMLSGYCAGWSLRTLLHEGLNGVPGKVEAGPPKHMSSAVG QIVNFLGTLQNEWAGAQAFSSFDTYMAPFVRKDGMDYAAVRQCIQELVYNLNVPSRWG TQTPFTNLTFDWTCPEDLREQVPVIGGVEMPFCYGELQAEMDVINRAYIDVMTTGDAK GRVFTFPIPTYNITPDFPWESENAVALFDMTAKYGLPYFQNFINSELSPNMVRSMCCR LQLDLRELLKRGNGLFGSAEQTGSLGVVTVNCARLGYLHAGDEASLFAALDRLLELGK QSLEVKRKLIQRLMDQGLFPYTKRYLGTLRNHFSTLGVNGINEMVRNFTHDAHDITSD WGHQFALRLLDHVRARMTAFQEETGHLYNLEATPAEGTTYRFAKEDKKRWPAILQAGT AEQPYYTNSSQLPVGFTDDPFEALQRQEALQGKYTGGTVLHLYMGERISSGAACRELV KRALTHFRLPYITVTPTFSICPTHGYLAGEHPFCPRCDEERLAAKRARLAA" gene complement(116857..120187) /locus_tag="Dtpsy_0107" /pseudo /db_xref="GeneID:7384339" gene complement(120465..120890) /locus_tag="Dtpsy_0108" /db_xref="GeneID:7384340" CDS complement(120465..120890) /locus_tag="Dtpsy_0108" /note="KEGG: ajs:Ajs_0091 hemerythrin HHE cation binding domain-containing protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0091" /transl_table=11 /product="hemerythrin HHE cation binding domain-containing protein" /protein_id="YP_002551594.1" /db_xref="GI:222109330" /db_xref="GeneID:7384340" /translation="MNIDRFKHEHRDILGQIATLRQLAHSGGEHNATAIAQGIVAMSS TIKLHLAVEDRLLYPALRQGADAELARLGEQFQREMGAIAAAYMDFARRWNTPERVRT DAEGFRADANTVLRHVYERMQRENRDFYPRIEAEEALAH" gene complement(120965..123271) /locus_tag="Dtpsy_0109" /db_xref="GeneID:7384341" CDS complement(120965..123271) /locus_tag="Dtpsy_0109" /note="KEGG: ajs:Ajs_0092 nitric oxide reductase large subunit" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0092" /transl_table=11 /product="nitric oxide reductase large subunit" /protein_id="YP_002551595.1" /db_xref="InterPro:IPR000883" /db_xref="GI:222109331" /db_xref="GeneID:7384341" /translation="MGKYAKYWYTLIGVLIVTFSLLGFYGAEVYRTAPPIPGQVLVQG SDKPLYTKDGILDGQTAWQSVGGMQLGSILGHGAYQAPDWTADWLHRELTAWLELAAQ KDHGKAFADLDVGQQAVLRDRLKTEYRTNTYDKAKDTMVISPLRAEAIAMTAQYYDKL FSNDPSLQKTRESYAMKENTLPSAERRAQMAGFFFWTSWAASTERPADNGGTGATYTN NWPHEPLVGNQPTGENLVWSVMSVVVMMAGVGFLVWGWAFLRKHDEQDPTPPQHDPLS RVALTPSQRALGKYLFLVVALFTAQVLLGGFTAHYTVEGQTFYGVEISQYLPYSLVRT WHLQAALFWIATGFLAAGLFLAPVINGGKDPKYQKLGVDVLFWALVVVCVGSFIGNYF AIAQIMPAEWNFWLGHQGYEYVDLGRLWQIGKFAGIAFWLVLMARAIFPALLAPNGQD KNLLALLTSSVVCIGLFYGTGLFYGERTHISVMEYWRWWVVHLWVEGFFEVFATTALA FIFSTLGLVSYRMATAASLASASLFMLGGVPGTFHHLYFSGTTTPVMAVGASFSALEV VPLVVLGHEAWEHWSLQHKATWMKNLKWPLMCFVAVAFWNMLGAGVFGFMINPPISLY YIQGLNTTPVHAHAALFGVYGFLALGFTLLVLRYVRPQMVFNERLMKTGFWWLNAGLV LMIATSLLPIGLFQFHASVAHGTWYARSEEFLQQPFLETLRWVRTFGDLVFITGALCV TWQVVSGVLFAPRAPAAPSTGALAGANR" gene 123545..125155 /locus_tag="Dtpsy_0110" /db_xref="GeneID:7384342" CDS 123545..125155 /locus_tag="Dtpsy_0110" /note="PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: GAF domain protein; AAA ATPase; KEGG: ajs:Ajs_0093 anaerobic nitric oxide reductase transcription regulator" /codon_start=1 /inference="protein motif:PFAM:PF00158" /transl_table=11 /product="transcriptional regulator, NifA subfamily, Fis Family" /protein_id="YP_002551596.1" /db_xref="InterPro:IPR002078" /db_xref="InterPro:IPR002197" /db_xref="InterPro:IPR003018" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR011704" /db_xref="GI:222109332" /db_xref="GeneID:7384342" /translation="MTIVEASPAAATSALLLCADLGAELPQAVRLQRLVDLLRTQFGC GAVALLRLEEERLRPVAVTGLVSDALGRRFAVGQHPRLAAILTRREVTCFEHDSQLPD PYDGLLDTLVGEPLPVHDCMGVALHVEGRPWGVLTLDALATGTFGPAARQRLGQWVPL VEAVVRVARLEQELRTLRMAATGPAEGDLALATPERGGAGELEIVGESPALKRLLHEL SVVAASELPVLLLGETGVGKELFARLLHHQSPRRARPLVHVNCAALPESLAESELFGH VRGAFSGAVSDRAGRFEAAEGGTLFLDEVGELPLSVQAKLLRTLQNGEIQRLGADRPR SVHVRVIAATNRNLREQVASGAFRADLYHRLSVYPVPIPPLRERGNDVLVLAGRFLEL NRARLGLRSLRLSPDAQAALRRYRWPGNVRELEHVISRAALKALSRGVDRNEIVTLEA GLLDLDALDEPVATPRSDAPMAPAAGGALSLAAPTGTLRDAVDACQRQVLNAALVAHG GNWAQAARTLDVDPSNLHKLARRLGLKG" sig_peptide 123545..123616 /locus_tag="Dtpsy_0110" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.620) with cleavage site probability 0.355 at residue 24" gene 125300..126349 /locus_tag="Dtpsy_0111" /db_xref="GeneID:7384343" CDS 125300..126349 /locus_tag="Dtpsy_0111" /note="KEGG: ajs:Ajs_0094 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0094" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551597.1" /db_xref="GI:222109333" /db_xref="GeneID:7384343" /translation="MASSIDPPRPPLAPAVRVLAEAALQRQNWLLAAPAAPTPAGAAP AGSAPTDAPPVTFSPNLLPPALPPMPAVQAGRERVSLSDQARQGLQAMAGGAVAPSRA PAASHGPAALSADAVADEGAFARAAAIPAPWPAQGVGAPLLRLLNTLVQQLGPAGGAA PRVLAAQPWPAGTDPAAGGTGLPALQIARVAQGMVYTPDGARGFTLTLRLPAAAMPAL PSAPTAPAALSVGFAGPPQTLAPGLFALVLQGPGAAGQRTSGWLSLDLAPAPGAAAVV YGRDPLQARTDPWLALAALQASGQSRVQEHDRAAEPPCSAPGCPYEGRAPCVQPFCLA LRVQPAPLAAPTGPG" gene 126432..127820 /locus_tag="Dtpsy_0112" /db_xref="GeneID:7384344" CDS 126432..127820 /locus_tag="Dtpsy_0112" /EC_number="4.3.1.17" /note="KEGG: ajs:Ajs_0095 L-serine ammonia-lyase; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain" /codon_start=1 /inference="protein motif:TFAM:TIGR00720" /transl_table=11 /product="L-serine dehydratase 1" /protein_id="YP_002551598.1" /db_xref="InterPro:IPR004644" /db_xref="InterPro:IPR005130" /db_xref="InterPro:IPR005131" /db_xref="GI:222109334" /db_xref="GeneID:7384344" /translation="MAVSVFDLFKIGIGPSSSHTVGPMRAARLFAQRLAREGVLAQVA RVRSTLYGSLGATGRGHASDRAVLLGLAGHAPDTVEVDAIEPLIARIRSRRRLPLADG PEVAFAEAADLLLVPDVTLPLHANGMRFEAFDAAGGTLAAQVYYSVGGGFIVSEEAAA DAQRQAAIAPDTEVLPLPFHSGEQLLAQAAAQGGSIAQVMRLNERHWRTDAEIDAGLL AIWRAMQDCVARGCSVGGVLPGGFQVRRRAPALHQALQNAPDTQQDPLQVIDWVNLFA LAVNEENAAGGRVVTAPTNGAAGIVPAVLHYYWRFIPGATEAGVVDFLLTAGAIGILY KENASISGAEVGCQGEVGVACSMAAAGLCAVLGGTPAQVENAAEIGMEHHLGLTCDPV GGLVQIPCIERNALASVKAINAARMALHGDGTHHVSLDQVIKTMRETGADMMTKYKET SRGGLAVNIVEC" gene 127879..129087 /locus_tag="Dtpsy_0113" /db_xref="GeneID:7384345" CDS 127879..129087 /locus_tag="Dtpsy_0113" /note="PFAM: aminotransferase class I and II; KEGG: ajs:Ajs_0096 aspartate aminotransferase" /codon_start=1 /inference="protein motif:PFAM:PF00155" /transl_table=11 /product="aminotransferase class I and II" /protein_id="YP_002551599.1" /db_xref="InterPro:IPR004839" /db_xref="GI:222109335" /db_xref="GeneID:7384345" /translation="MHNPASPTDTLLPALARPAIQSLGGSLIREVANTGMGRADVLPF WFGESDQPTPQFIRDAAAQSLGSGETFYSQNLGRPYLREAIAQYLSDLHGREVSAQRI GAVASGDAGLMLTCQMLLSPGDRVVAVTPLWPNLLEMPRILGAQVERVPLAVRGGRWT LALDRLLDALTPGTRMLILNSPNNPTGWTIDEESLVAILAHCRRHGIWILSDDVYERL VYDPQLASAPSFLRHYAPGDRIISVNSCSKAWCMTGWRAGWMVVPEALEADLGKVIEY NFSCIFEPVQRAATVALQQGEAHVAQLRAGLVESRRLLVQALRAVPGVEVPDAGGAMY VFFRLAGFDDSLALAKHLVSEVGLGLAPGAAFGPEGEGWLRWCHAVSDGARLREGVER LARFVQRATA" gene 129266..130216 /locus_tag="Dtpsy_0114" /db_xref="GeneID:7384346" CDS 129266..130216 /locus_tag="Dtpsy_0114" /note="PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0097 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF03401" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551600.1" /db_xref="InterPro:IPR005064" /db_xref="GI:222109336" /db_xref="GeneID:7384346" /translation="MPLRRHLLALCLTALPLATWAAWPERPITIVVPAAAGGTTDIAA RVLAEKMAKDLGTSIVVENKGGGGGSIGTAQVARAKPDGYTLLMGNIGPVAINFSLYK QLSYKESDLRGITNVISVPNILVVHADSPVRSAQELVSLAKTRRLNVSTSGVGQSPHM SSEMFRQKSGIEVTLVPYPGAAPAVTALLGQQVDFMIDNLPSSMPHIKAGKFRALAIT SAERSAQLPDVPTMAEAGVPMQVTAWFGLLAPTGTPDAVVERLQQSARKAMQTPEVRQ RFAELGGVPGGETPAEYDAFIAQERKSWAQIVKAAGLSLE" sig_peptide 129266..129331 /locus_tag="Dtpsy_0114" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 1.000 at residue 22" gene 130262..131842 /locus_tag="Dtpsy_0115" /db_xref="GeneID:7384347" CDS 130262..131842 /locus_tag="Dtpsy_0115" /note="PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_0098 AMP-dependent synthetase and ligase" /codon_start=1 /inference="protein motif:PFAM:PF00501" /transl_table=11 /product="AMP-dependent synthetase and ligase" /protein_id="YP_002551601.1" /db_xref="InterPro:IPR000873" /db_xref="GI:222109337" /db_xref="GeneID:7384347" /translation="MHPDIEHLLAQPFGSLPELIERQAAHRPGHTALVLEDRRLDYAA LHAGMDRVARSLQRDGMQPGDVVAICAGTSVEYVLAYLGALRAGVAVAPLAPSATAEH LSAMLDNCGARLVLRDREVAAQWPLHAGAALRCVALDDAAEAGEPWSQWLAQGDGAPA TTPAPITPEPDWPFNVIYSSGTTGVPKGIVQSWAMRWAHVRRAVTNGYGPDAVSLCAT PLYSNTTLVAALPTLALGGTLVLMRKFDATRYLALAQQHGATHTMLVPVQYQRLMACS DFDRTDLSRLQHKFCTSAPFSAALKAEVLRRWPGRLIEYYGMTEGGVRCELHCHDFPH KLHTVGRPGEGADIRFIDEQGRELPAGEQGEIVGRSAGMMSGYYRLPDKTREAEWFDA EGRRYIRSGDVGRLDADGFIVLGDRKKDMIITGGFNVYPSDIEAVLCQHPQVAECAVV GVPSEQWGETPVAYVVGRSGSQPTAEELREWLNTRVGKTQRVADLRLVERLPRSEIGK VLKRTLREQYLQAAPIAG" gene 131870..132865 /locus_tag="Dtpsy_0116" /db_xref="GeneID:7384348" CDS 131870..132865 /locus_tag="Dtpsy_0116" /note="PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0099 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF03401" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551602.1" /db_xref="InterPro:IPR002016" /db_xref="InterPro:IPR005064" /db_xref="GI:222109338" /db_xref="GeneID:7384348" /translation="MSLPRPSRLRRALLASMALTASALLAPVAYAADAWPAKPIQLVI PYPPGGSADLLGRPLAMQLQQQLGQPVVLEYKPGAGGTLASQYVARAKPDGYTVFMVL AAHAINDSLYPKLPYDTRKDFAPVSLVANLPMVVAASGKLPAKNIHELIQAAKAAPGK LTFGSAGNGNTGHLAAEYFSSIAGVKMTHVPYKGSAGVVNAMLAGDIDLTFDSISTSM PHIRGGRMHALAVTSPQRSALAPEVPTVQEQGMAGFDVTGWYALIAPAGTPPEITQRL SREIAAALRQPQLQSQLAAGGYEPVGSTPEALQAHIEREITRWAAVVKSTGARVD" sig_peptide 131870..131965 /locus_tag="Dtpsy_0116" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.999 at residue 32" gene 133029..133496 /locus_tag="Dtpsy_0117" /db_xref="GeneID:7384349" CDS 133029..133496 /locus_tag="Dtpsy_0117" /note="PFAM: thioesterase superfamily protein; KEGG: ajs:Ajs_0100 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF03061" /transl_table=11 /product="thioesterase superfamily protein" /protein_id="YP_002551603.1" /db_xref="InterPro:IPR003736" /db_xref="InterPro:IPR006683" /db_xref="GI:222109339" /db_xref="GeneID:7384349" /translation="MQQPSSITADIPLSPFAGEAPDMFFGLPMAMARAMALRGERIGH DMAQVRMRFQADQANSRGEVHGGSIATLLDCTLAAAARAHDPAAYGVATIDLTLHYVA AGTGDLIATARCERRGRSISFVRGEVRAEDGTLVAMATGSFKLIARSTASASA" gene complement(133513..134532) /locus_tag="Dtpsy_0118" /db_xref="GeneID:7384350" CDS complement(133513..134532) /locus_tag="Dtpsy_0118" /note="PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0101 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF03401" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551604.1" /db_xref="InterPro:IPR005064" /db_xref="InterPro:IPR006311" /db_xref="GI:222109340" /db_xref="GeneID:7384350" /translation="MKHEAHPLGWNRRHLLALAAATAAAGPLGARAQAAPTGFATRPV RVVVPFAAGGATDVIARILGERMAQRFGQSVVVDNKPGAAGLIAGEMVAKAPPDGMTA LLGTTSSMLTNKYLYKKTPYDPLTELTPLVRVCLAPIALVVTADTPAQNLQDFMAWIR SQKGKLTYGSYGIGSHGQLACTTLSEVAGADMTHVAYKGEAPMVQDLLGGQIKIGMGS LLSLKAHVDAGKLRALAVTGPRRVPLLPEVPTFTEAGYPQDALSIVGWLAIAGPKAMP ADVARQWAQAANHAVASREGLARIIAAGFVPVDDDTPEKFARLWAQEAPVWGRLLQAA GVQPS" sig_peptide complement(134434..134532) /locus_tag="Dtpsy_0118" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.717 at residue 33" gene complement(134761..135747) /locus_tag="Dtpsy_0119" /db_xref="GeneID:7384351" CDS complement(134761..135747) /locus_tag="Dtpsy_0119" /note="PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0102 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF03401" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551605.1" /db_xref="InterPro:IPR005064" /db_xref="GI:222109341" /db_xref="GeneID:7384351" /translation="MAFTRRKTLGQWLPLIALAATCGVGAAQAQDHYPSKPIRVIVPY PAGGGTDIIARLIGTQLSQRLGQAVVVENKPGASGILGNDTVAKAPGDGYTVLMGITT VVQIPALYKKVPYKLSDLAPVSQVAKSADLLMVPRSSGVTTLQQFVDKAKAAPGTLNF GSYGNATSSHMNGERFKQKAGIDITHIPYQGSGPEMAAMLGGQLSLAFVDATAAYPHI KSDKINILAITGAQRHPALPQVPTMTEAGYPGLEANGWFGMFVPATTPKAIVDKLGSE VSSIVKSPELNKRLTEMGLIPVGSLPDDFKAQIDKDAAHWKAVAEAAKISMD" sig_peptide complement(135658..135747) /locus_tag="Dtpsy_0119" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.959 at residue 30" gene complement(135792..136946) /locus_tag="Dtpsy_0120" /db_xref="GeneID:7384352" CDS complement(135792..136946) /locus_tag="Dtpsy_0120" /note="PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ajs:Ajs_0103 acyl-CoA dehydrogenase domain-containing protein" /codon_start=1 /inference="protein motif:PFAM:PF00441" /transl_table=11 /product="acyl-CoA dehydrogenase domain protein" /protein_id="YP_002551606.1" /db_xref="InterPro:IPR006089" /db_xref="InterPro:IPR006090" /db_xref="InterPro:IPR006091" /db_xref="InterPro:IPR006092" /db_xref="InterPro:IPR013107" /db_xref="GI:222109342" /db_xref="GeneID:7384352" /translation="MQDLIQRTVFREDHEQFRDAVRHFFDKEIVPHLADWERNGIVPK EVWRKAGREGLLNTMLPEPYGSGGDFGHAAVLIEEVGRTNATALGFPLHSDIVAPYIY AYGNQEQHDRWLPKMAAGEMIGAIAMTEPGAGSDLKSVRTTAKLVKSSEGDHYVINGA KTFITNGINSEIVIVVCKTAPDLGAKGVSLIVVEDGTPGFSKGRKLEKIGLMGQDTSE LFFDNVKVPVGNLLGEENMGFKYLMQELAQERLVVAVRAARCIESFLQKTIDYTRERK AFGQTVFEFQNTRFKLAEAKAQATMLRTFVDECMKLHMQRKLTPERAAMVKLNATALQ NKLLDEFLQLHGGYGYMTEYQVGRAWTDARIGRIYGGSDEIMKEIIARTL" gene complement(137019..138587) /locus_tag="Dtpsy_0121" /db_xref="GeneID:7384353" CDS complement(137019..138587) /locus_tag="Dtpsy_0121" /note="PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_0104 AMP-dependent synthetase and ligase" /codon_start=1 /inference="protein motif:PFAM:PF00501" /transl_table=11 /product="AMP-dependent synthetase and ligase" /protein_id="YP_002551607.1" /db_xref="InterPro:IPR000873" /db_xref="GI:222109343" /db_xref="GeneID:7384353" /translation="MTGMQDFFGRAAAAPERVVLAMAETGVQYRAGEVARSALGMAQW LHAQGLQPGERFAVVLENRVEILALALAARQAGLYAAVLSTHLTPAEVAYIVRDCGAR LVVASDKTLPQLGGLQDGPPLPCWTVDAATPQAASLPAALAAQQGPAADFADRPLGRD LLYSSGTTGRPKGVLKPLWPAHLRGQTDPEALGTARIMGMGEDTVYLSPAPLYHAAPL RYTLRVLELGGQAVIMERFDAETALALIERYRVTHSQWVPTMFGRMLKLPETVRQRYD LSSHRVAIHAAAPCPVDVKHAMLDWWGDILMEYYAGSEGCGTTMINSAEWRRRPGSVG RPTTGRLHIVGDDGQELPAGEIGQVYFSGGGQFSYLNDEEKTRQAINERGWITYGDIG HVDAEGYLYLSDRRADLILSGGVNLYPQEIENALMRHPDVYEVAVVGVPHPDFGEQPL AAVVLRHGAQASLDTARAIAAQAAEVLARMKLPQRVVFVDALPRLETGKLLRRKLKER FRDEPQAGFALRDS" gene 138787..139965 /locus_tag="Dtpsy_0122" /db_xref="GeneID:7384354" CDS 138787..139965 /locus_tag="Dtpsy_0122" /EC_number="2.3.1.16" /note="KEGG: ajs:Ajs_0105 acetyl-CoA acetyltransferases; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase" /codon_start=1 /inference="protein motif:TFAM:TIGR01930" /transl_table=11 /product="acetyl-CoA acetyltransferase" /protein_id="YP_002551608.1" /db_xref="InterPro:IPR002155" /db_xref="GI:222109344" /db_xref="GeneID:7384354" /translation="MKNPVIVDAIRSPMARAKPDGALAQVHPVDLLSQVLEQLVERNQ IDPGQVDDVICGCVSQAGEQAGTPGRLAWLAAGLPAHVPSTTIDRKCGSSQQAVHFAA QAIMAGTQDIVIACGVESMSRVPMGSSRMGQNTTGARFDARYAPGLVGQGVSADLVAA QWGLDRTALDTYAARSHQRAHAAQSSGGFAREIVGIDTPAGRVTADETIRAGTTVEKL AGLKAVFENEELSARFPQIQWATTAGNASQMTDGASAMLIMSEQRAQQLGLRPRARFV AFDVVGDDPLYMLTAPIPATQRVLAKAKMKLDDIHHYEINEAFASVPLAWQKELKADG ERLNPRGGAIALGHPLGASGIRLMTTMLHALEDSGQRYGLQSMCEAGGMANATIIERL " gene 140029..140796 /locus_tag="Dtpsy_0123" /db_xref="GeneID:7384355" CDS 140029..140796 /locus_tag="Dtpsy_0123" /note="PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ajs:Ajs_0106 short-chain dehydrogenase/reductase SDR" /codon_start=1 /inference="protein motif:PFAM:PF00106" /transl_table=11 /product="short-chain dehydrogenase/reductase SDR" /protein_id="YP_002551609.1" /db_xref="InterPro:IPR001509" /db_xref="InterPro:IPR002198" /db_xref="InterPro:IPR002347" /db_xref="InterPro:IPR013968" /db_xref="GI:222109345" /db_xref="GeneID:7384355" /translation="MKLQQGMTALVTGGVSGLGEATALQLLERGLNVVVVDLNDERGQ AMEQQYAGRLRYVKADVSDAEQMAPAIAAAQAFGNFRALVHCAGIGGPLRLIEKDGSP GSLEKYVNIIRVNLIGTFNVLRLAAVSMAGNEPIDGERGACVLTASVAGYEGQIGQIP YASSKAGVIGLTLVAARDLASKFIRVCTIAPGLFDTPILAKLPENVRQSLSASVPHPA RLGYPSEYAMTALHILENPMLNGETIRLDGAIRMAPR" gene 140970..141734 /locus_tag="Dtpsy_0124" /db_xref="GeneID:7384356" CDS 140970..141734 /locus_tag="Dtpsy_0124" /note="PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ajs:Ajs_0107 enoyl-CoA hydratase" /codon_start=1 /inference="protein motif:PFAM:PF00378" /transl_table=11 /product="Enoyl-CoA hydratase/isomerase" /protein_id="YP_002551610.1" /db_xref="InterPro:IPR001753" /db_xref="GI:222109346" /db_xref="GeneID:7384356" /translation="MASTVLVEVRGNVLIMTLSNPEARNAATLEMAEAMAAALDELDR NPALQVGVITGAGGTFCAGMDLKGFLQGKRPSLPGRGFLGLTQQPPRKPLIAAVEGYA LAGGFETVLACDLIVAAKTAQFGLPEVKRGLAAAAGGLLRLPRRLPYHLAMEAILTGD MFSAERAQAHGLVNRLVEPGQALDSALELAQAVAANGPLALIASKRVAQESADWTQAE MFERQAVITAPVFASLDAREGAAAFAEKRPPVWKGV" gene 141835..142833 /locus_tag="Dtpsy_0125" /db_xref="GeneID:7384357" CDS 141835..142833 /locus_tag="Dtpsy_0125" /note="PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0108 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF03401" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551611.1" /db_xref="InterPro:IPR005064" /db_xref="InterPro:IPR006311" /db_xref="GI:222109347" /db_xref="GeneID:7384357" /translation="MPFPHRRHALRLAGATALLGLAALGASQPARADATWPTRPITFV VPGAAGGTTDTPVRFMAQKLSERLGQPIVVDNKPGAGGSLGSSLVARAQPDGYNVLVG NTGSNAINYTAYQKLPYKAEDFTPLTDMISFANVLVVPVKSPIKSLKELVAAAKREPG KLAFSSAGVGQTTHLMGELLRQSAGVDVVHVPYKGSAPATMAIVAGETQFMFDNLTGS LGHVKDGKLRALAVTGATREPELPDVPTMTELGMKDFDKVGWMGFFVPAKTPPAVVKK LTDNLIAVLQDPAVVKRYRELGGRPGGMAPEQFSQMVERDRQDWGALIRSQKLQLD" sig_peptide 141835..141933 /locus_tag="Dtpsy_0125" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.996 at residue 33" gene 142846..143652 /locus_tag="Dtpsy_0126" /db_xref="GeneID:7384358" CDS 142846..143652 /locus_tag="Dtpsy_0126" /note="PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ajs:Ajs_0109 short-chain dehydrogenase/reductase SDR" /codon_start=1 /inference="protein motif:PFAM:PF00106" /transl_table=11 /product="short-chain dehydrogenase/reductase SDR" /protein_id="YP_002551612.1" /db_xref="InterPro:IPR002198" /db_xref="InterPro:IPR002347" /db_xref="InterPro:IPR013968" /db_xref="GI:222109348" /db_xref="GeneID:7384358" /translation="MAEFSSFAGRHVFVAGGTSGINLGIAQAFARAGAHVVVMSRSPD KVQQAAEGLRALGAQALGISADVRDPAAVDAALRQAHAQFGDIDVLISGAAGNFIAPA ADLSPNGFKTVIDIDLNGSFHVLRLAYPMLKKPGASVINISAPQGVNPTMYQVHACAA KAGIDMMTRVLAMEWGEVGVRVNAIAPGPIGDTEGMRRLAPTPEALANAVATVPLQRM GTLDDIANMALFLSSPQAGYVTGAVIPVDGGSSLRGGRDMRASYVPRSAA" gene 143649..144441 /locus_tag="Dtpsy_0127" /pseudo /db_xref="GeneID:7384359" gene 144482..145270 /locus_tag="Dtpsy_0128" /db_xref="GeneID:7384360" CDS 144482..145270 /locus_tag="Dtpsy_0128" /note="PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: ajs:Ajs_0111 regulatory proteins, IclR" /codon_start=1 /inference="protein motif:PFAM:PF09339" /transl_table=11 /product="transcriptional regulator, IclR family" /protein_id="YP_002551613.1" /db_xref="InterPro:IPR005471" /db_xref="InterPro:IPR014757" /db_xref="GI:222109349" /db_xref="GeneID:7384360" /translation="MNVNADPDGKLVSALVRGVSILRCFSSKCQELSAKELMDLTGLP KPTLFRLTDTLCELGLLRYSERLSKYVPGLGLLQLSSPVLTRMALRQFARPHMQALAD LTEGQVQLAVGHKRRLCMVELANGMGNTVFRQEIGVPISLSRTATGRAYLLGMAEDDR KAYLQDLQRNDPQRAAWLEQRLTDARDDFARHGFCRSHGDLHREIESIAVPMSQPQDG ELWVFAVSVPVFSPMYARLETDLGPRLRTLVRSVESVLGASGLT" gene 145314..146426 /locus_tag="Dtpsy_0129" /db_xref="GeneID:7384361" CDS 145314..146426 /locus_tag="Dtpsy_0129" /note="PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: ajs:Ajs_0112 L-carnitine dehydratase/bile acid-inducible protein F" /codon_start=1 /inference="protein motif:PFAM:PF02515" /transl_table=11 /product="L-carnitine dehydratase/bile acid-inducible protein F" /protein_id="YP_002551614.1" /db_xref="InterPro:IPR003673" /db_xref="GI:222109350" /db_xref="GeneID:7384361" /translation="MKVLDSVRVLEIGGLGPGPFCAMHLADLGADVISVVRETKGRET TGALLNRGKRSVFADLKTEEGRQLVLALVAEADALIEGMRPGVMERLGLGPEECMAVN PRLVYGRMTGWGQSGPLAPRAGHDTNYAAVSGALWGCSPVGARPVSPFAVLGDIGGGA MYLMTGLLSGIVQARATGRGTVVDAAIVDGSAHMLNLMLSARQSGLVADVRGQSIHDS APFYDTYVCADGHYVTVGAIEPQFYTLLLQVLGLAEDPDFTGSQWDKAAWPVRRARLA ALFLAQPRAHWQALLEPTDACFGVVLSPVEAAQHPHMRARDVYSERQGVLQAAPAPRF DGAAYEPGEACAPGAHTQSVMEGLGQSGARAVWRQR" gene complement(146463..147686) /locus_tag="Dtpsy_0130" /db_xref="GeneID:7384362" CDS complement(146463..147686) /locus_tag="Dtpsy_0130" /note="PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_0113 major facilitator superfamily transporter" /codon_start=1 /inference="protein motif:PFAM:PF07690" /transl_table=11 /product="major facilitator superfamily MFS_1" /protein_id="YP_002551615.1" /db_xref="InterPro:IPR007114" /db_xref="InterPro:IPR011701" /db_xref="GI:222109351" /db_xref="GeneID:7384362" /translation="MRLFRTQPLWVMLLTLLSGFALSQAYRTTTAIVAQGLQADFGLQ ASSLGAFAGLFGLSFGIAQLLMGIALDRYGLRRTVLVAAPLGIAGAALSALAPSYGWL MVGQVLIGVGYSPAFVACTLFIARYFAADRFAFFSGLSMGLGGLGLLFTGTPLAWVVQ HWGWRAGFGLLAGLSLLSWLLIYALVHEPVRADTAHRPASSWGEALTGMGRLFTVPHT WGIVILGMSCYAAFLSLRGLWLGPLLIDRYGFSLVDSGNVALVLSLIALFTPAAFGRM DPGPARRRTWVGRASLSMAGLFAIMAWVNNAQATVALMIAMGLLSGYSILQYADVRSS YPNEQTGRALSLYTMAMFLGVALMQSLTGAVAAWATSAGLEPYRAVLLCIAAWLALAS LAFRLLPASALLQQR" sig_peptide complement(147615..147686) /locus_tag="Dtpsy_0130" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.760 at residue 24" gene complement(147769..148638) /locus_tag="Dtpsy_0131" /db_xref="GeneID:7384363" CDS complement(147769..148638) /locus_tag="Dtpsy_0131" /note="PFAM: HpcH/HpaI aldolase; KEGG: ajs:Ajs_0114 HpcH/HpaI aldolase" /codon_start=1 /inference="protein motif:PFAM:PF03328" /transl_table=11 /product="HpcH/HpaI aldolase" /protein_id="YP_002551616.1" /db_xref="InterPro:IPR005000" /db_xref="GI:222109352" /db_xref="GeneID:7384363" /translation="MTDSVRHACSFLFVPATQPERLPKALASGADLVIADWEDAVAPA DKERARTALADALATLPAPQRARLLVRINSEATPWFTADLQALAQLTAQGLAGAVVPK AERAQTLQAVAQAAGLHAALVPLVESVAGLAAADALATAPQVARLAFGHLDFQVDAGM ACAEDEQELLPVRMALVLASRRAGLAAPIDGVTVDTRNPERMGRDAERARRMGFGGKL CIHPAQVPVLHAAFDPDEAAVTHAQRVRQALEQAGGGVCVLDGRMVDAPVLAQAEQTL LRHARALQRLARV" gene complement(148668..149045) /locus_tag="Dtpsy_0132" /db_xref="GeneID:7384364" CDS complement(148668..149045) /locus_tag="Dtpsy_0132" /note="PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cti:RALTA_B2224 putative metallothiol transferase" /codon_start=1 /inference="protein motif:PFAM:PF00903" /transl_table=11 /product="Glyoxalase/bleomycin resistance protein/dioxygenase" /protein_id="YP_002551617.1" /db_xref="InterPro:IPR004360" /db_xref="GI:222109353" /db_xref="GeneID:7384364" /translation="MIDRLDHLVLTTAHEAQCVHFYCTVLGMALQTFGEGRKAFVFNG QKINLHIQGREFEPKAQHPMPGALDLCFIASIPLAQVQQRLAEYGIAIECGPVQRTGA RGPILSVYVRDPDHNLIEIAEYA" gene complement(149109..150116) /locus_tag="Dtpsy_0133" /db_xref="GeneID:7384365" CDS complement(149109..150116) /locus_tag="Dtpsy_0133" /note="PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0115 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF03401" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551618.1" /db_xref="InterPro:IPR005064" /db_xref="InterPro:IPR006311" /db_xref="GI:222109354" /db_xref="GeneID:7384365" /translation="MTARFIPISRRTTFGAIAAACAALALGGPAAANTWPEKNVTLVV PYSAGGPTDVVARLLAVPMGQSLGQTVVVENTVGAGGTIAPNRVAKSKNDGYTILIHH MGMATAPALYKKLPYDPLKDFEYIGQVLDVPMTLLSRKDFPANTFPELLDYVKKNQDK VSLANAGVGAVSQLCGMLFMHQVGVKLTTVPYKGAGPAMNDLMGGQVDLLCDQTTQTA PVIQDGKRAKVFGVTTPQRLASMPNIPTLDEQGLKGFDVKVWHGMYAPKGTPKDVIEK LNKALNVAIKDENVKKRIAELSSDLVSPEKATPEGLRKHLAAEVARWDKVIKAAGVSA E" sig_peptide complement(150018..150116) /locus_tag="Dtpsy_0133" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.985 at residue 33" gene complement(150205..151569) /locus_tag="Dtpsy_0134" /db_xref="GeneID:7384366" CDS complement(150205..151569) /locus_tag="Dtpsy_0134" /note="PFAM: MmgE/PrpD family protein; KEGG: ajs:Ajs_0116 MmgE/PrpD family protein" /codon_start=1 /inference="protein motif:PFAM:PF03972" /transl_table=11 /product="MmgE/PrpD family protein" /protein_id="YP_002551619.1" /db_xref="InterPro:IPR005656" /db_xref="GI:222109355" /db_xref="GeneID:7384366" /translation="MKQETQVTIHPLAQFAATLQWSDVPAPVQRRTEDLWVDWFGSVL AGCRARPVASITRFALSQGPASGPAEVIGHGATSSPMMAALANAAASHVAEQDDVHNG SVFHPAAVVFPPALAVAQSIGASGAQLMAACVAGYEVGIRVGEFLGRSHYKVFHTTAT AGTLAAAAAVGRLLDLTPAQMQHAFGSAGTQSAGLWEFLRTAADSKQLHTAHAAAAGL MSAYLAQDGFTGAQDIFTGPQGLAAGMSSDANPAKLTEGLGTRWATAETSFKWHASCR HTHPAADALQQVMREHGLAPADIAQVTCHVHQGAIDVLGPVVSPTTVHQSKFSMGTVL ALAARFGHAGLTEFDEQFLAPDTVTLREKVRMVLDPEVDAAYPQRWIGKVTVQTTDGR TLAGRVEEPKGDPGNTLSREELTAKALRLAAYGGAVSDAQARAAVQRLWQVQEWPRTQ HLLG" gene complement(151620..152810) /locus_tag="Dtpsy_0135" /db_xref="GeneID:7384367" CDS complement(151620..152810) /locus_tag="Dtpsy_0135" /note="PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: ajs:Ajs_0117 L-carnitine dehydratase/bile acid-inducible protein F" /codon_start=1 /inference="protein motif:PFAM:PF02515" /transl_table=11 /product="L-carnitine dehydratase/bile acid-inducible protein F" /protein_id="YP_002551620.1" /db_xref="InterPro:IPR003673" /db_xref="GI:222109356" /db_xref="GeneID:7384367" /translation="MTKTIRPLDGLTVVSLEHAVAAPFCTRQLADLGARVIKVERPGS GDFARGYDQRVKGQSSHFTWINRSKESLALDVKQPQAKAALLQLLKTADVLVQNLAPG AAARMGLSYEALKAHNPKLIVCDISGYGADGPYRDKKAYDLLIQSEAGFLSVTGTPET PSKSGISVADIAAGMYAYTNILSALLLRGKTGEGSHIDVSMLEAMGEWMGYPMYYAFD GAPPPPRTGASHASIYPYGPFVAGDGKTVMLGLQNEREWKAFCDAVLQRPEVASDARF DSNGQRNAHRDALQALILQEFSTLSAAQVVERLDQAGIANARVNDMADLWAHPQLAAR QRWSDVDSPVGRIPALLPPGVNSAFDYRMDAVPAVGQHNAAILAELGWSAEQIDALQA PQPL" gene complement(152979..154139) /locus_tag="Dtpsy_0136" /db_xref="GeneID:7384368" CDS complement(152979..154139) /locus_tag="Dtpsy_0136" /note="PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ajs:Ajs_0118 acyl-CoA dehydrogenase domain-containing protein" /codon_start=1 /inference="protein motif:PFAM:PF00441" /transl_table=11 /product="acyl-CoA dehydrogenase domain protein" /protein_id="YP_002551621.1" /db_xref="InterPro:IPR006089" /db_xref="InterPro:IPR006090" /db_xref="InterPro:IPR006091" /db_xref="InterPro:IPR006092" /db_xref="InterPro:IPR013107" /db_xref="GI:222109357" /db_xref="GeneID:7384368" /translation="MIHQPDQYQEIRDAVRALCAQYPDEYFRKVDEARAYPEAFVDAL TQAGWMAALIPQEYGGSGLTMAEASVIMEEINRSGGNSGACHGQMYVMNAIVRSGSEA QKQKYLPKIASGELRIQSMGVTEPTTGSDTTKLKTSAVKKDGRWVINGQKVWISRIQH SDLMILLARTTPADQVKKRSDGLSCFLIDLHQAIGNGLTVRPILNMVNHETNELFFDN LEIPEDALLGEEGKGFKTLLDGLNAERTLIAAECIGDGYWFIDRASKYAKERVVFNRP IGQNQGVQFPIADAFIELEAANLMRWKACEKIDAHQNAGAEANMAKYLAAKASWEAAN VCLQTHGGFGFACEYDIERKFRETRLYQVAPISTNMIYSYVAEHILGLPRSF" gene complement(154211..155116) /locus_tag="Dtpsy_0137" /db_xref="GeneID:7384369" CDS complement(154211..155116) /locus_tag="Dtpsy_0137" /note="KEGG: ajs:Ajs_0119 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0119" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551622.1" /db_xref="GI:222109358" /db_xref="GeneID:7384369" /translation="MATMTEPTIDTAQLAHLQTWQGQSETLSDTLTATPIAALSATLD RDDPAPAPGTTVPPLWHWLYFLPHARQSEIGPDGHPKRGGFLPPVPLPRRMWAGGRLR WEMQGDGANPLQVGQQVQRTSTIQSVKHKAGRSGELLFVLVEHQYRNAQGLALTEEHD IVYRSAAQPGDPAPTPQKPPLEGQAAWSRTIVPDDVLLFRYSALTFNGHRIHYDRKYV TEVEGYPGLIVHGPLIATLLLDLLRRSLPGAQVLTFDFRAVRPTFDLHPFSVHGRPSS DGKSVELWAQDHEGWLTMQGTATLA" gene 155310..156227 /locus_tag="Dtpsy_0138" /db_xref="GeneID:7384370" CDS 155310..156227 /locus_tag="Dtpsy_0138" /note="PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ajs:Ajs_0120 short-chain dehydrogenase/reductase SDR" /codon_start=1 /inference="protein motif:PFAM:PF00106" /transl_table=11 /product="short-chain dehydrogenase/reductase SDR" /protein_id="YP_002551623.1" /db_xref="InterPro:IPR002198" /db_xref="InterPro:IPR002347" /db_xref="InterPro:IPR013968" /db_xref="GI:222109359" /db_xref="GeneID:7384370" /translation="MAQKMVQDKVVVVTGAGGGIGRDMALALAAAGAKVVVNDIGTST TGEGTDAGPAQKVVEEIKAAGGQAVANMDSVAEAAAAGRIIQCALDHFGRIDGVVNNA GILRDRFFHKMSLDEWDAVLKVHLYGSYYMSRAAANHFKEQESGAFVHMTSTSGLIGN FGQANYSAAKLGLVALSKSIALDMQQFHVRSNCIAPFAWSRMIGSIPTDTPEQQARVA KIQQMTPNKIAPLAVYLLSDQAKDVNAQVFAVRNNEIFLMSQPRPLRSVHRSEGWTPE FIAEHGMPALKASFVPMERSGDVFSWDPV" gene 156417..157310 /locus_tag="Dtpsy_0139" /db_xref="GeneID:7384371" CDS 156417..157310 /locus_tag="Dtpsy_0139" /EC_number="4.2.1.107" /note="PFAM: MaoC domain protein dehydratase; KEGG: ajs:Ajs_0121 dehydratase" /codon_start=1 /inference="protein motif:PRIAM:4.2.1.107" /transl_table=11 /product="3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoAhydratase" /protein_id="YP_002551624.1" /db_xref="InterPro:IPR002539" /db_xref="GI:222109360" /db_xref="GeneID:7384371" /translation="MAIDYHHLKARDFGVIRQTYTERDTMLYALSLGLGNDPLNASAL PFVYEGLEGGLRALPSQAVVLGYPGFWAREPDTGIDWVKLLHGEQRMRLHRPLPASGE VVGHNRITHLTDKGEGKGAIMVTERRLETAAGELLATVQQVTFLRGDGGYSQQGGGQP SDAPLPALQPTPQDRAPDFTDTQPTRPEAALLYRLMGDYNPLHADPAVAAKAGFERPI LHGLASYGLVAHAVLRQCCAGDPARLKAMDIRFAAPVYPGETLVTEIWRVPGQPAQVQ LRARVLERDKVVLSHGFAELA" gene 157389..158183 /locus_tag="Dtpsy_0140" /db_xref="GeneID:7384372" CDS 157389..158183 /locus_tag="Dtpsy_0140" /note="PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ajs:Ajs_0122 enoyl-CoA hydratase" /codon_start=1 /inference="protein motif:PFAM:PF00378" /transl_table=11 /product="Enoyl-CoA hydratase/isomerase" /protein_id="YP_002551625.1" /db_xref="InterPro:IPR001753" /db_xref="GI:222109361" /db_xref="GeneID:7384372" /translation="MSASPVLTSVQDGIGTITLNRPEARNALNQAMRPALAAAIAQMR DDAQVHAVILTGAGGAFCSGGDISAMLDTSRTGLAFRKGMRELHQWFPELVNLEKPVI AAVDGPAFGAGLSLALAADFVLATRRAKFCAVFGRIGLIPDLGAMHLLPRIVGQQKAK ELVFTARTVDAEEAQQLGMVFDIVDDATALTEAALALARRFGEASTAAIGMAKTIMNQ SFESDARTIAELESYAQSVCRGSDYHQDAVRRFKDKQPLRFDWDRK" gene 158355..159635 /locus_tag="Dtpsy_0141" /db_xref="GeneID:7384373" CDS 158355..159635 /locus_tag="Dtpsy_0141" /note="PFAM: acetyl-CoA hydrolase/transferase; KEGG: ajs:Ajs_0123 acetyl-CoA hydrolase/transferase" /codon_start=1 /inference="protein motif:PFAM:PF02550" /transl_table=11 /product="acetyl-CoA hydrolase/transferase" /protein_id="YP_002551626.1" /db_xref="InterPro:IPR003702" /db_xref="GI:222109362" /db_xref="GeneID:7384373" /translation="MSVLAERLQALIRPGDTLWWGQATAEPLTLTRAVVQQRHALAQG GRLRVFVGIGASDTLQPGQADAIDFFGYAAGGPHRALAQAGVLDILPSHYSHLPGLIR AGVLPVDVVLLQVSPPDAQGRYSLGLVQEYLPAAIERARVVIAEVHPDVPWTHGGLHL QASDFALLIDAEHPPLDQSRSAPGPVEQAIARHVAGWVEDGATLQLGIGNLPEAVLAA LHGHRDLGLHSGAVGDGIAALAEAGVLTNARKSLDTGVGIGGILMGGERLRRWAHRNP QIELRGTDYTHDPAVLAASHKLTAINAAIEVDLTGQINAEVAAGCYVGAVGGAVDFLR GAARSKGGLPIVALPATAKGKTRIVAQLSGPVSTPRSDAGLIVTEHGVADLRGQTLSR RVRRLIDIAAPEHRADLERQAHDTLRRCGAVFQI" gene 159702..160910 /locus_tag="Dtpsy_0142" /db_xref="GeneID:7384374" CDS 159702..160910 /locus_tag="Dtpsy_0142" /EC_number="2.3.1.9" /note="KEGG: ajs:Ajs_0124 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase" /codon_start=1 /inference="protein motif:TFAM:TIGR01930" /transl_table=11 /product="acetyl-CoA acetyltransferase" /protein_id="YP_002551627.1" /db_xref="InterPro:IPR001412" /db_xref="InterPro:IPR002155" /db_xref="GI:222109363" /db_xref="GeneID:7384374" /translation="MRRAAIVTPVRTPVGTFGGSLRPVPVEELAATTVRAVVERSGID PARIDDVVMAQSYANSEVPCVGRWAALQAGLPVSVPGMQLDRRCGGGLQAIVTASMMV QSGAADVVIAGGVESMSNIEYYSTDMRWGARSGNVRFYDRLDRGRERSQPVERFGKIS GMIETAENLARDYGITREEADAFALRSHQRAAAAWEAGRFADEIVPVQVPQRKGEPVT FARDEGFRPDVTPESLAKLRVLMPNGTVTAGNASQQNDASAACLIVAEDKLAELGLTP MATLVGWAAAGCEPSHMGIGPVPAVKKLLARLNLRIDDMDLVELNEAFACQVLAVLKG WEWRDQDAIAHKLNVNGSGISLGHPIGATGVRILATLLHELQRRKGRYGLETMCIGGG QGIAAVFERV" gene 161170..162144 /locus_tag="Dtpsy_0143" /db_xref="GeneID:7384375" CDS 161170..162144 /locus_tag="Dtpsy_0143" /note="PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0125 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF03401" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551628.1" /db_xref="InterPro:IPR005064" /db_xref="GI:222109364" /db_xref="GeneID:7384375" /translation="MPASRRLATAALALAPFAFALPAAAQDGQPVRLIVGYAAGGPVD QGARLFAPALSKELGMPVMVENKTGANATIAGSEVVRSKPDGMTLWFAASPTITISPN VMTKMPFDPAKDLTPVAPILSYYNVLVVNNNEPYKSVRELVATAKSNPGKLAYGSAGV GGSNHLGALLFAKRSGIEMNHIPYKGNAPAMTDVIGGQLNMMLDIISTASAYIHSGKV RAIAVTSPQRNASLPDVPTFAESGIDGLKGFDVGGWYGVYGPKGMSPELVAKLNKAVN AALQQPDLKKRYKELGYDEWTGAPQKLAERGAQERAMWATVTQGITVD" sig_peptide 161170..161247 /locus_tag="Dtpsy_0143" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.999 at residue 26" gene 162146..163660 /locus_tag="Dtpsy_0144" /db_xref="GeneID:7384376" CDS 162146..163660 /locus_tag="Dtpsy_0144" /note="PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_0126 AMP-dependent synthetase and ligase" /codon_start=1 /inference="protein motif:PFAM:PF00501" /transl_table=11 /product="AMP-dependent synthetase and ligase" /protein_id="YP_002551629.1" /db_xref="InterPro:IPR000873" /db_xref="GI:222109365" /db_xref="GeneID:7384376" /translation="MAERIHHLLDRWLAEAPARPFIHLPDGRSLSFADLGALTDTAEA ELRALDVRPGDRVLVVAENCPEHAALILACSRVGAWSCGVNARMAPAEIDAFVGKADA RVVFFTAAASRSAAAHAQRFTAVDSALPGMQHGAVLQDAQPEAGALRDTVASLIFTSG TTGQPKGVMLTHDALIHFARVSGASRALGPQDRSYAFVPMTHIFGLGTVLISSLLAGA QLVMRPQFDPDDLLDALAHHGVSQLQGPPALFSRLLAHLQERGIQRPEAPALRYLYTG AGPLDLALKQRVEAAFGQALHHGYGLSEYAGSVHLTRLGEQRTDTSAGYAVAEAEVRV TDPATGEPLPLGERGELWIRGRGLMPGYFRDPAATAAVMREGGWYASGDLGEMHADGA LFVVGRLKEMIIRSGFNVYPAEVETALNTHPSVQRSAVVGRTVEDGNEEIVAFVELRP GAALDADAMQSHLRELLAPYKRPSHIVALSELPTNTNGKVLKRTLKDQALCLTT" gene 163679..164656 /locus_tag="Dtpsy_0145" /db_xref="GeneID:7384377" CDS 163679..164656 /locus_tag="Dtpsy_0145" /note="PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0127 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF03401" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551630.1" /db_xref="InterPro:IPR005064" /db_xref="GI:222109366" /db_xref="GeneID:7384377" /translation="MHSTTSRRSFIAGSLLAAAHPLAALAADPWPSKPVRFIVPFPPG GPVDTTARVFSHRLSEIWKTPTVIDNRAGAGGVVGATAAAKEAPDGYGLFVGAIHHSV NPSLMGKLPYDIEKDFAPISFAAMFPVFIVAHPSVPANTIQELIALAKKGTPLAYGSS GNGGGTHLAGELFNMEAGTKLQHIPYKGSAPAMNDLLGGQVQLMFSDAPTALQHIKSG RVKVLGVASRQRSAMLPDVPTGVESGLPGYEAYSWAALFAPAKTPQAVLDKINADFNT AMKDPAVRQRLLDAGAEADPGTQEQMRQRLRGELDKWAKVIKTAGITPG" sig_peptide 163679..163759 /locus_tag="Dtpsy_0145" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.999 at residue 27" gene 164752..165135 /locus_tag="Dtpsy_0146" /db_xref="GeneID:7384378" CDS 164752..165135 /locus_tag="Dtpsy_0146" /note="PFAM: protein of unknown function DUF35; KEGG: ajs:Ajs_0128 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF01796" /transl_table=11 /product="protein of unknown function DUF35" /protein_id="YP_002551631.1" /db_xref="InterPro:IPR002878" /db_xref="GI:222109367" /db_xref="GeneID:7384378" /translation="MHLSAQTHYQAELDAGRFCLQHCPQCKNHVFTPRELCPHCGASP LRWVRASGLGTVYSATTIARKADAGGNYNVALIDLDEGVRMMSRVEGVAPEDVRIGQR VQARVAQKDGRGLVLFQPAAQGGAA" gene 165132..166340 /locus_tag="Dtpsy_0147" /db_xref="GeneID:7384379" CDS 165132..166340 /locus_tag="Dtpsy_0147" /note="KEGG: ajs:Ajs_0129 thiolase" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0129" /transl_table=11 /product="thiolase" /protein_id="YP_002551632.1" /db_xref="GI:222109368" /db_xref="GeneID:7384379" /translation="MSRVPQSPLDAAAVNRPLRGRAAIVGAATYGCGEAPGMDDMTLL VRAAHAAVADAGLTMQDIDGLATCSVNASMWTMPVIEHLGINPTYVDGTMIGGSSFIA HLLPAIRALEAGQCKAVLVCYGSAQRSATFGRKESVAARRFLDPQPYEFPYEPVLPVS AYALAAARHMHEFGTTREQLAEVAVAARAWAQQNPEAFMRDPLTIEDVLAARPIASPL TVRDCCLVTDGGGALVLTRAERARDLPNPPVYVLGNATAIWNRQISCMPDLTTTAAAQ SGAQAFAMAGLQAKDMDMAQVYDAFTINTLLFLEDLGFCAKGEAGAFVQNGGIAPGGR LAVNTNGGGLSCVHPGMYGIFALIEAVRQLRGEAGARQLSRHDTAVVHGNGGTLSSQS TAVLGTADTL" gene 166367..167524 /locus_tag="Dtpsy_0148" /db_xref="GeneID:7384380" CDS 166367..167524 /locus_tag="Dtpsy_0148" /note="PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ajs:Ajs_0130 acyl-CoA dehydrogenase domain-containing protein" /codon_start=1 /inference="protein motif:PFAM:PF00441" /transl_table=11 /product="acyl-CoA dehydrogenase domain protein" /protein_id="YP_002551633.1" /db_xref="InterPro:IPR006089" /db_xref="InterPro:IPR006090" /db_xref="InterPro:IPR006091" /db_xref="InterPro:IPR006092" /db_xref="InterPro:IPR013107" /db_xref="GI:222109369" /db_xref="GeneID:7384380" /translation="MIRDPDILEALLDSVRRFVRERLVPAENEVAETDEIPESIVQEM RELGLFGMTIPEKFGGLELTMEEECRVLFELCQTAPAFRSIIGTTVGIGSQGILMDGT PEQQAQWLPKLATGEVIASFALTEPEAGSDAASLRTTAIKDGDHYIVNGTKRYITNAP HAGMFTLMARTNPADKGAGGVSSFIVDAKTPGISFGKYDKKMGQRGAHTCDVIFDNVK VPAANLIGLQEGRGFKTAMKVLEKGRIHIAAVAVGVAQRILRDALAYALERKQFGQPI CDFQLVQAMLADSQAELYAAECMTIDAARRRDDGHNVSTEASCAKMFATEMCGRVADR AVQILGGAGYMAEYGIERFYRDVRLFRLYEGTTQIQQIIIARNMVREARAA" gene 167521..167943 /locus_tag="Dtpsy_0149" /db_xref="GeneID:7384381" CDS 167521..167943 /locus_tag="Dtpsy_0149" /note="PFAM: thioesterase superfamily protein; KEGG: ajs:Ajs_0131 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF03061" /transl_table=11 /product="thioesterase superfamily protein" /protein_id="YP_002551634.1" /db_xref="InterPro:IPR003736" /db_xref="InterPro:IPR006683" /db_xref="GI:222109370" /db_xref="GeneID:7384381" /translation="MSGAPPLVDRSAFLRLIGAAQVPAPPGKVQVRLPHLREELLNQL PAAHGGVVMALLDSVMSRAAGELPEAPSQTAVTVEMSSRFHRPGRGALLAEGWVVHAT RSLCSCAGQLLDEDGQLVATAHGTFKYWLAPTTLDSKK" gene complement(168020..168943) /locus_tag="Dtpsy_0150" /db_xref="GeneID:7384382" CDS complement(168020..168943) /locus_tag="Dtpsy_0150" /note="PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_0132 LysR family transcriptional regulator" /codon_start=1 /inference="protein motif:PFAM:PF03466" /transl_table=11 /product="transcriptional regulator, LysR family" /protein_id="YP_002551635.1" /db_xref="InterPro:IPR000847" /db_xref="InterPro:IPR005119" /db_xref="GI:222109371" /db_xref="GeneID:7384382" /translation="MPAMAMHFDLVDLRLMVHIADANSMTRGAELSFISLPAASTRIK NLEESIGTKLLYRTSQGVTLTPPGQAFVSHARMVLGQIEHLRGDMQEYVRGIKGHVRV FANTTSLGEFLPPVLRHFLRRNPDVNIDLRERLSHDIVRAVTEGQTDIGIVAGLVRTE NLETLPYRRDRLVLVVPKGHALDGEMQIDFADTLELDYVGLHESSAIHAFLRHASDQL HRPIKLRIQVGNFETACRMIEAGVGVGVLPESAASRHAQAMDIAIVPLSDAWSVREMQ ICVRSMEALPSFAQELVDLLVADAQGRLQLE" gene 168997..170349 /locus_tag="Dtpsy_0151" /db_xref="GeneID:7384383" CDS 168997..170349 /locus_tag="Dtpsy_0151" /note="PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: ajs:Ajs_0133 L-carnitine dehydratase/bile acid-inducible protein F" /codon_start=1 /inference="protein motif:PFAM:PF02515" /transl_table=11 /product="L-carnitine dehydratase/bile acid-inducible protein F" /protein_id="YP_002551636.1" /db_xref="InterPro:IPR003673" /db_xref="GI:222109372" /db_xref="GeneID:7384383" /translation="MQSRGAGAGRTMRLPLGKHRLSMTTPDSSSSPGAGRAGALGHLR VLDLSRVLAGPWCTQNLADMGADVIKIEKPGDGDDTRHWGPPFFPDADGQPSEHACYF AACNRNKRSVTVDMATPEGQRLIRELAQQSDVVVENFKTGGLKRYGLDYESLSALNPR LIYCSVTGFGHTGPYAPRAGYDLLIQAMSGLMSVTGHADGEPGGGPMRVGVAVIDLFT GMYATTAILGALEARHRTGRGQHIDMALLDVAMAVLANQGAGFLNAGNIPKRQGNTHP SVVPYQDFPTQDGNMLLAIGNDGQFARFCEAAGTDWAGDERFATNAGRVTHRETLIPL MAALTRTRPTAAWIALLEDKAVPCGPINHVGQAFDDAQVRARGLRVEQQRYPGAQPPA GEVVNRVVTTASPLRLSDTPVTLRYAPPPLGQHTDEVLRERLGLDAAQLQALRAQRVL " gene complement(170357..171337) /locus_tag="Dtpsy_0152" /db_xref="GeneID:7384384" CDS complement(170357..171337) /locus_tag="Dtpsy_0152" /note="PFAM: porin Gram-negative type; KEGG: ajs:Ajs_0134 porin" /codon_start=1 /inference="protein motif:PFAM:PF00267" /transl_table=11 /product="porin Gram-negative type" /protein_id="YP_002551637.1" /db_xref="InterPro:IPR001702" /db_xref="GI:222109373" /db_xref="GeneID:7384384" /translation="MRMSQCLPLSFATLAALALPATAQSQVTISGYLDTGVFRDYDKT RKLGTIQRSHLAVAGTEDLGGGLKANFRLSTRFELDTGQSEGAGSKPFWHDESTVGLQ GGWGQLRLGRALSAMWSQEWKFDAFSNFNRIASTAWHMAHYYTPTDRASNNGAAEYGR MTNGIYYDSPTWDGFSFNASASTERTQTPGRDGRGGSVALNYDQGPVAAMVGYERNGS GDKDLFLGGLYRLGAATLMMAYDHSRAGSSPDTSRMVSVGGSYALGVTTLRASYGRQR LNDGVTHHMASLGAEYNLSKRTMLYASLGHQRYEHNPSRTAFGVGVAHAF" sig_peptide complement(171266..171337) /locus_tag="Dtpsy_0152" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.940 at residue 24" gene complement(171687..172991) /locus_tag="Dtpsy_0153" /db_xref="GeneID:7384385" CDS complement(171687..172991) /locus_tag="Dtpsy_0153" /note="PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: ajs:Ajs_0135 Glu/Leu/Phe/Val dehydrogenase, C terminal" /codon_start=1 /inference="protein motif:PFAM:PF00208" /transl_table=11 /product="Glu/Leu/Phe/Val dehydrogenase" /protein_id="YP_002551638.1" /db_xref="InterPro:IPR006095" /db_xref="InterPro:IPR006096" /db_xref="InterPro:IPR006097" /db_xref="GI:222109374" /db_xref="GeneID:7384385" /translation="MSNTPNPPLPTHALPSYLDPNHLGPWGVYLQQIDRVTPYLGSLA RWVETLKRPKRALIVDVPIELDNGTIAHFEGYRVQHNVSRGPGKGGVRFHQDVTLSEV MALSAWMSIKNAAVNVPYGGAKGGIRVDPKTLSKAELERLTRRYTSEIGIIIGPSKDI PAPDVNTNAQVMAWMMDTYSMNVGTTATGVVTGKPVDLGGSLGRVEATGRGVFTVGVE AARLTGMAIEGARVAVQGFGNVGGTAGKLFAEAGAKVVAVQDHTGSIHNDKGLDVPAL LAHVQQTGGVGGFAGAEPMANDAFWGVACDILIPAALESQITKDNAGRIQAKMVIEGA NGPTTPEADDILNDKGVLVLPDVISNAGGVTVSYFEWVQDFSSFFWTEDEINARLVRI MKEAFAGVWQVAQENKVTLRTATFIVACKRILHAREMRGLYP" gene complement(173172..174089) /locus_tag="Dtpsy_0154" /db_xref="GeneID:7384386" CDS complement(173172..174089) /locus_tag="Dtpsy_0154" /note="PFAM: protein of unknown function DUF344; KEGG: ajs:Ajs_0136 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF03976" /transl_table=11 /product="protein of unknown function DUF344" /protein_id="YP_002551639.1" /db_xref="InterPro:IPR005660" /db_xref="GI:222109375" /db_xref="GeneID:7384386" /translation="MPTYLPPFDIADDALAKQWRQWQPKDFAPNGGNGKNGKNGKHAD KDNGALHLKDYDPGAKPFSCGDKALDKARVEELALELDALQDLLYADRRYKLLVVLQG MDTAGKDGTVRGVFGRMSALGVHAVGWKAPTELERAHDYLWRIHRQVPGAGELTVFNR SHYEDVLVPVVNGWITPEQQRQRYAHINDFERLLAETGTVVMKFMLHISKDEQRQRLQ ERLDDPTKHWKFDMGDIQVREQWDAYQRAYEAFLPATHTPWAPWTIVPADSKTHRNLM IASVLRGVLQRLELRYPPGDPALEKFTVK" gene complement(174119..175042) /locus_tag="Dtpsy_0155" /db_xref="GeneID:7384387" CDS complement(174119..175042) /locus_tag="Dtpsy_0155" /note="PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_0137 LysR family transcriptional regulator" /codon_start=1 /inference="protein motif:PFAM:PF03466" /transl_table=11 /product="transcriptional regulator, LysR family" /protein_id="YP_002551640.1" /db_xref="InterPro:IPR000847" /db_xref="InterPro:IPR005119" /db_xref="GI:222109376" /db_xref="GeneID:7384387" /translation="MAFTSDNVLVFLAVLDRGSFSAAARALSRVPSAVSMAIAQLEAE LDMPLFDRSGREPRPTAAARALEPQARALAAQLQQLNTQALALTQGLEERLTLAIAPE LLAARWHGPLATLAQDYPLLQVEVLAAPQADALALLHAGRAQLALVFERPSLDGREDF QEVGSETLVAVIAPQHPLLAPRAAGAGPAGLREEHLAGTRQIVVAGRDLGQTDARFVY ARHHWRTDSHLAALGLIEAGLGWGWQPRALVAPRIAAGTLVELPLENLSNGAQLWVDV VWSRERPLGLGARRFVELMARQRPGSSPAPQ" gene 175114..175602 /locus_tag="Dtpsy_0156" /db_xref="GeneID:7384388" CDS 175114..175602 /locus_tag="Dtpsy_0156" /note="PFAM: transmembrane pair domain protein; KEGG: ajs:Ajs_0138 transmembrane pair domain-containing protein" /codon_start=1 /inference="protein motif:PFAM:PF05232" /transl_table=11 /product="transmembrane pair domain protein" /protein_id="YP_002551641.1" /db_xref="InterPro:IPR007896" /db_xref="GI:222109377" /db_xref="GeneID:7384388" /translation="MSATTHAVGLQGPKRRVVFVTLYEIIAIIVSSLLFMAIGQGAGA SGVMAVVASALAIAWNVTFNALFERWEARQRVKGRSVLRRVVHAVGFEGGLALVLIPL MAWWFGVSLWQATVMEAGLLLFFLVYTYAFNWAFDRVYGLPASAQAMPAAAPAGAVVG AP" gene complement(175647..176573) /locus_tag="Dtpsy_0157" /db_xref="GeneID:7385327" CDS complement(175647..176573) /locus_tag="Dtpsy_0157" /note="PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_0139 LysR family transcriptional regulator" /codon_start=1 /inference="protein motif:PFAM:PF03466" /transl_table=11 /product="transcriptional regulator, LysR family" /protein_id="YP_002551642.1" /db_xref="InterPro:IPR000847" /db_xref="InterPro:IPR005119" /db_xref="GI:222109378" /db_xref="GeneID:7385327" /translation="MELRQLRYFLSVAETEHLTRSADALFVTQSTLSHGLRQLEAELG VPLFDRLGRGLRLSQAGHAFRDHAARALQELEAGRQAVADMSALQTGTLQVGVIPTFL TRFVPDAVAAFSARYPGVQLTVRDLRSGQIEELLIAGRLDLGIAFHPASREEIEAEPL FEERMHLVVHQGHPLARRQRLRLAELAGVPLALLPASFATRRLIDAAFAQAGVTPLVR VEMESVDALLQACRSGPLATIAAEHAALHAGPDMRAAVLTEPRTVRRAGLLWRRGASR SAAAREFVALLRPAIARTAAPPSLQGGVAQQE" gene 176722..177924 /locus_tag="Dtpsy_0158" /db_xref="GeneID:7383422" CDS 176722..177924 /locus_tag="Dtpsy_0158" /note="TIGRFAM: muconate and chloromuconate cycloisomerase; PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: ajs:Ajs_0140 muconate and chloromuconate cycloisomerases" /codon_start=1 /inference="protein motif:TFAM:TIGR02534" /transl_table=11 /product="muconate and chloromuconate cycloisomerase" /protein_id="YP_002551643.1" /db_xref="InterPro:IPR001354" /db_xref="InterPro:IPR013341" /db_xref="InterPro:IPR013342" /db_xref="InterPro:IPR013370" /db_xref="GI:222109379" /db_xref="GeneID:7383422" /translation="MTTSPSASVLRIERIQARILDIPTIRPHKLSFGAIQRQSPVIVQ LWLSDGASGFGEAATIGGPSWNEESPESIRHAIDSYLAPAVIGQDAGRFEQLLQRMDL ACKGNRFAKSAVEQAAIDAVARSLGLPVWQLLGGKQRESLPLAWTLASGDSAKDIEEA EKMLAARRHRIFKLKIGARAPQEDVAHVARIARALDGRASMTVDVNQAWDGATARRYL PEMIDAGVGLIEQPVAQWNEEALRQLTATLPHTALVMADETVCTPQDAMRLARHNACH VFSLKIAKHGGLLRTRAVADVARAADIGWYGGTMLETSVGSAASAHVFATLGGTHHNC ELFGPQLLVDDIVEQQMVLSDFALQLPDGPGFGLTVVPERLDRFDRARQGLTPVHVDL GRASAQPA" gene 177953..178249 /locus_tag="Dtpsy_0159" /db_xref="GeneID:7383423" CDS 177953..178249 /locus_tag="Dtpsy_0159" /EC_number="5.3.3.4" /note="KEGG: ajs:Ajs_0141 muconolactone delta-isomerase; TIGRFAM: muconolactone delta-isomerase; PFAM: Muconolactone delta-isomerase" /codon_start=1 /inference="protein motif:TFAM:TIGR03221" /transl_table=11 /product="muconolactone delta-isomerase" /protein_id="YP_002551644.1" /db_xref="InterPro:IPR003464" /db_xref="GI:222109380" /db_xref="GeneID:7383423" /translation="MLFLVRMDVKIPHDLPAAQADEIKAREKKYSQDLQRDGRWRHIW RVVGEYANYSVFDVQSNDELHQLLSQLPLFPYMDIHVTPLANHPSAIVQEGAPG" gene 178296..179219 /locus_tag="Dtpsy_0160" /db_xref="GeneID:7383424" CDS 178296..179219 /locus_tag="Dtpsy_0160" /note="PFAM: intradiol ring-cleavage dioxygenase; Catechol dioxygenase domain protein; KEGG: ajs:Ajs_0142 intradiol ring-cleavage dioxygenase" /codon_start=1 /inference="protein motif:PFAM:PF00775" /transl_table=11 /product="intradiol ring-cleavage dioxygenase" /protein_id="YP_002551645.1" /db_xref="InterPro:IPR000627" /db_xref="InterPro:IPR007535" /db_xref="GI:222109381" /db_xref="GeneID:7383424" /translation="MAEYTAQQLLDIVNTVHVAEGNARVRQITQRIVTDLFRTIEELD VTPDEFWAGVGWLTRLGASGQTGLITAGLGFDRLIDIRMDEADERAQRAAGTPRAIEG PLFVAGAPLSEREVRLDEGEEPPRGEVVVMEGRVLDTDGQPVAGALVDVWHANELGRY SHFDPDQAPYHLRRKIRTGADGSYRFRSFIPPGYAIPPGSPTAELFDALGRHGNRPAH IHFLVVAEGLRTLTTQVNIPGDSFLDDDFAFATRDGLVVTLEPGTPAAGYESLGISAP FTRVRFDFVLQKALSADEQRPEARMDRVAAA" gene 179246..180238 /locus_tag="Dtpsy_0161" /db_xref="GeneID:7383425" CDS 179246..180238 /locus_tag="Dtpsy_0161" /note="PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0143 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF03401" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551646.1" /db_xref="InterPro:IPR005064" /db_xref="GI:222109382" /db_xref="GeneID:7383425" /translation="MTFSRRIALLGACTLAAAGLLPAAAVAQPDANWPSKPIKWVVPF PPGGAMDVIARTLGEKAGRTLGQPFVIENRPGAGGNIGADAVAKSPADGYTIMITSIG MATNKALYPRLSYDPVKDFAPISLLAIVPNVLVVNTAKTTDKSVADVIAHAKRDPGKL TYASAGNGTSIHLAGEVFASMAGLNLLHVPYKGSGPAVTDMLGGQVDLMFDSITSARP HILSGKLRALGVTSAKRSATLPGVPTIAEAGVPGYEVSPWFAVFAPAGTPAAIVNKIN AALIDAMKQPDTVAKFETIGAEPIGTTPQQLATHLDKELARWGALIKERNIRMD" sig_peptide 179246..179329 /locus_tag="Dtpsy_0161" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.898 at residue 28" gene complement(180324..181736) /locus_tag="Dtpsy_0162" /db_xref="GeneID:7383426" CDS complement(180324..181736) /locus_tag="Dtpsy_0162" /note="TIGRFAM: cytochrome c oxidase accessory protein CcoG; KEGG: ajs:Ajs_0144 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein" /codon_start=1 /inference="protein motif:TFAM:TIGR02745" /transl_table=11 /product="cytochrome c oxidase accessory protein CcoG" /protein_id="YP_002551647.1" /db_xref="InterPro:IPR014116" /db_xref="InterPro:IPR017900" /db_xref="GI:222109383" /db_xref="GeneID:7383426" /translation="MPAPQTQPPAAERDVYVDLYEAKKKIYPRAIGGVFTRWRWALVL LTQGVFYGLPWWQWGERQMVLFDLGARRFYLFGLVLYPQDFIYLTGLLIMSALSLFLF TAVAGRLWCGFACPQTVYTELFLWLERLTEGDRSARMRLDKGPWTFEKLWRKTLKQLA WMSVALWTGFTFVGYFVPIRQLGGELLALHGTWQIFWVGFYSFATYGFAGYMREQVCK YMCPYARFQSAMFDKDTLIVTYDTQRGEPRAARSKKVDAKAAGLGDCIDCSLCVQVCP TGIDIRKGLQYECIGCGMCVDACNTVMDKVQYPRGLIRYATQNGMQNRWSSAQMLRRV LRPRVLFYSAVLLALCTAMLASLVTRTPLKVDVVRDRAALSRVVAGGQLENIYRVQVM NATEQPQRYRITASGLQGLQVASEPEVEIGPAESRWVAVRLQVPYGAAPAGSHTVHLD VQALGDRAQVSEKTVFLVPR" gene complement(181781..182395) /locus_tag="Dtpsy_0163" /db_xref="GeneID:7383427" CDS complement(181781..182395) /locus_tag="Dtpsy_0163" /EC_number="1.10.2.2" /note="KEGG: ajs:Ajs_0145 ubiquinol-cytochrome c reductase, iron-sulfur subunit; TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein" /codon_start=1 /inference="protein motif:TFAM:TIGR01416" /transl_table=11 /product="ubiquinol-cytochrome c reductase, iron-sulfur subunit" /protein_id="YP_002551648.1" /db_xref="InterPro:IPR005805" /db_xref="InterPro:IPR005806" /db_xref="InterPro:IPR006311" /db_xref="InterPro:IPR006317" /db_xref="GI:222109384" /db_xref="GeneID:7383427" /translation="MTALPASCTCAAPDAERRTLIHATAAAGGLAAVGAAVPLVSSLA PSERARSLGAAVEVDIAGLPPGGMLTVEWRGKPVWVVRRTPEMLQSLQGLEAQLADPA SAKDQQPDYARNTHRSIQPEVFVAIGICTHLGCSPTAVAPGAPQSGLGAGWPGGFFCP CHGSTFDNAGRVYRNKPAPTNLEVPPHRFLSATRLLIGEDSASA" gene 182599..183951 /locus_tag="Dtpsy_0164" /db_xref="GeneID:7383428" CDS 182599..183951 /locus_tag="Dtpsy_0164" /note="PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; PAS fold-4 domain protein; SMART: AAA ATPase; KEGG: ajs:Ajs_0146 sigma-54 dependent trancsriptional regulator" /codon_start=1 /inference="protein motif:PFAM:PF00158" /transl_table=11 /product="sigma54 specific transcriptional regulator, Fis family" /protein_id="YP_002551649.1" /db_xref="InterPro:IPR002078" /db_xref="InterPro:IPR002197" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR011704" /db_xref="InterPro:IPR013656" /db_xref="GI:222109385" /db_xref="GeneID:7383428" /translation="MADTQDLSPTPAQVAQTALLASWLEGLPEPHILFDRGYRIVAAN GAYRRQFGQGAPVVGRTCHAVSHHSPVPCDQAGETCPLARSLFSGQRERVLHLHHTPA GEEYVQIELVPLRDEAGQPQYFLEKMEPLRIAQGQPGAPGMIGRAPAFQAVLELIARV GPSQASVLLLGESGTGKELAARAVHEASPRAGRPLVVVDCASLPETLFESELFGHERG AFTGAHAARAGLVEAAHGGTLFLDEVGDIPLTMQVKLLRLLESGTYRRVGHTELRRAD IRLVAATHRDLRAMVREGRFRQDLYYRLSTFPIQLPALRERPQDIPLLAESLLQRVAG GRGLVLAPAALRRLAQHPFPGNVRELRNVLERAALLTDGAAVTAHTIERALSFDAPAA APARAAQQPDHATLRDIESEALRAALAGGAASRRELARALGVSTRTLYRKLRLLREQG " gene 184270..187059 /locus_tag="Dtpsy_0165" /db_xref="GeneID:7383429" CDS 184270..187059 /locus_tag="Dtpsy_0165" /EC_number="2.1.1.13" /note="KEGG: ajs:Ajs_0147 methionine synthase (B12-dependent); TIGRFAM: methionine synthase; PFAM: dihydropteroate synthase DHPS; Methionine synthase B12-binding module cap domain protein; Vitamin B12 dependent methionine synthase activation region; cobalamin B12-binding domain protein" /codon_start=1 /inference="protein motif:TFAM:TIGR02082" /transl_table=11 /product="methionine synthase" /protein_id="YP_002551650.1" /db_xref="InterPro:IPR000489" /db_xref="InterPro:IPR003759" /db_xref="InterPro:IPR004223" /db_xref="InterPro:IPR006158" /db_xref="InterPro:IPR011822" /db_xref="GI:222109386" /db_xref="GeneID:7383429" /translation="MPSSAPASSVPSHAVPPMRLSGLEPVFIGEGSLFVNVGERTNVT GSKAFARMILNDQYEQALSVARQQVENGAQIIDVNMDEAMLDSKAAMVRFLNLIASEP DIARVPVMVDSSKWEVIEAGLRCLQGKGIVNSISMKEGVEEFKRQAKLIRRYGAAAVV MAFDEKGQADTFARKTEICERAYRILVDEVGMAPEDIIFDPNIFAIATGIEEHANYAV DFIEAVRWIKQHLPGAKVSGGVSNVSFSFRGNEPVREAIHTVFLYHAIKAGMDMGIVN AGMVGVYDDLDPELRERVEDVVLNRRPDAAERLLEIAEAAKGAAKDDSKKLEWRGTPE HPKTVGERLSHALVHGITDFIVEDTEEAYQQIVVQGGGRPLHVIEGPLMDGMNIVGDL FGAGKMFLPQVVKSARVMKQAVAHLIPYIEEEKRQQEAAGLDVSSKGKIVIATVKGDV HDIGKNIVTVVLQCNNFEVINMGVMVPCHEILARAKAEGADIIGLSGLITPSLEEMQY VAGEMDKDEYFRIKKIPLLIGGATCSRVHTAVKIAPQYQGPVVYVPDASRSVSVAQSL LGEQKDSYLAEVQADYDHVRHLHANKKKTPVWPLAQCRANKTRIDWAHYQPPAPKFIG RRVIKNIDLAELVPFIDWAPYFQTWDLAGKYPDILQDEVVGEEATRVFRDAQAMLKKI VEGRWLTAHAVVGFWPANTVRDDDIELYADAARDKVVLTWYGLRQQAEKQPDAEGRMR PSRCLADFIAPRPEGGAPTQADHIGAFAVTAGIGVDAKVAEFMADHDDYNAITLKALA DRLAEAGAEWLHHRVRTDWWGYQAGEQLSNDELIAEKYVGIRPAPGYPACPDHRVKKP LFALLGTADVDMDITDSYAMTPAASVSGFYFSHPESTYFSVGKIDDAQVQDMAQRSGV PLAEVERALAPNLGL" gene 187095..188696 /locus_tag="Dtpsy_0166" /db_xref="GeneID:7383430" CDS 187095..188696 /locus_tag="Dtpsy_0166" /note="PFAM: Peptidoglycan-binding domain 1 protein; ErfK/YbiS/YcfS/YnhG family protein; KEGG: ajs:Ajs_0148 peptidoglycan binding domain-containing protein" /codon_start=1 /inference="protein motif:PFAM:PF03734" /transl_table=11 /product="ErfK/YbiS/YcfS/YnhG family protein" /protein_id="YP_002551651.1" /db_xref="InterPro:IPR001986" /db_xref="InterPro:IPR002477" /db_xref="InterPro:IPR005490" /db_xref="GI:222109387" /db_xref="GeneID:7383430" /translation="MNLRLLTHHTAPLLLAAWMPLAAWANPSWLTADGRPLPAAHEAV RWLNEAAADGLEPADYGAQHLSDALAAAAARGLDAASAVALDQELTQAVERYLYELHG GRIDPARLNERYDHSRRPQPDLRAALQTALADGQIQQARDAAIPRVPMYPALRALLAH YRALGAHPAWAQPLPALPGRKLTPGQPWEGLGVLAERLVALGDLPPQPTGEPPAASAP AQYTPVLVEAATAFQRRHGLEADGVLGATTLAALNVPPAARAEQIALQMERLRWTPVL QGPRMIAVNVPEYRLRAYEYAGGRITLRLSMAVIVGKALDTRTPLFDEDMQSIEFSPY WNIPPSIARGETVPRLRRDPGYLARQGMEFVSAAGVSTDTTPEMLGAVVAGQARIRQR PGPLNALGDIKFVLPNNDNIYLHHTSAPTLFGRSRRDLSHGCVRVGEPVALAQFVLQD DPTWTVERIRAAMAQPKPVFVRLPHPVPVIITHITVVVQDGRPHFYGDLYGHDRKLAS LLRQHSAKPYDAVRAGSAAGVIGPK" sig_peptide 187095..187172 /locus_tag="Dtpsy_0166" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.999 at residue 26" gene 188730..189302 /locus_tag="Dtpsy_0167" /db_xref="GeneID:7383431" CDS 188730..189302 /locus_tag="Dtpsy_0167" /note="PFAM: protein of unknown function DUF882; Peptidase M15A; KEGG: ajs:Ajs_0149 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF05951" /transl_table=11 /product="protein of unknown function DUF882" /protein_id="YP_002551652.1" /db_xref="InterPro:IPR010275" /db_xref="InterPro:IPR013230" /db_xref="GI:222109388" /db_xref="GeneID:7383431" /translation="MAPPHNPHRRLFLGRGAAVAHAAAAAVLLPKAALASLSEEQDLA RRLAFNHLHTHERLALVYAQGEQFIPAALPTLNHFLRDHYSGDVGVMDPDLFHLLHRV RQTLQTQQPFEVISGYRSPHTNETLRTTRGGGVARRSLHMDGKAIDVRLPGVSLSDLR DAAISLRAGGVGYYAREQFVHIDTGRVRSW" sig_peptide 188730..188807 /locus_tag="Dtpsy_0167" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.968) with cleavage site probability 0.851 at residue 26" gene complement(189371..189907) /locus_tag="Dtpsy_0168" /db_xref="GeneID:7383432" CDS complement(189371..189907) /locus_tag="Dtpsy_0168" /EC_number="2.7.1.71" /note="PFAM: shikimate kinase; KEGG: ajs:Ajs_0150 shikimate kinase" /codon_start=1 /inference="protein motif:PRIAM:2.7.1.71" /transl_table=11 /product="Shikimate kinase" /protein_id="YP_002551653.1" /db_xref="InterPro:IPR000623" /db_xref="GI:222109389" /db_xref="GeneID:7383432" /translation="MQTRCALVGMPGSGKSTVGRQLARRLGLPFVDLDQRLEQRLGTS IRDYFDQHGEAAFRDHEAALLAELAAQPGGMVLSTGGGAVLREDNRATLRRGFPHVMY LRASPDEIFKRIKHDRTRPLLQVDDPLARLRDLYRARDPLYREAAHYVIETGRPTVHT LVNMIMMQLEMAAPGDPV" gene 190039..190956 /locus_tag="Dtpsy_0169" /db_xref="GeneID:7383433" CDS 190039..190956 /locus_tag="Dtpsy_0169" /note="PFAM: ribonuclease BN; KEGG: ajs:Ajs_0151 ribonuclease BN" /codon_start=1 /inference="protein motif:PFAM:PF03631" /transl_table=11 /product="ribonuclease BN" /protein_id="YP_002551654.1" /db_xref="InterPro:IPR004664" /db_xref="GI:222109390" /db_xref="GeneID:7383433" /translation="MPLSLQSLKSFAQPLLQRVLQPIAPLVRAVQMWLDADGLRMSAA MSFYGMLSLAPLLLLLVGVLGWWIDQAYLESNLIAQVRGVMGERGAEVVRLALASAQE PAEGRLASMAGFVLLLSGATGVFVELQSALERLWAHGQPAPERKAWWRMASLRLRGLA YVLAIGFLLLVSLVLSTAINVLATWASARLPFGSGTLLQIVNEAVAFAVAVALFLGLM RIGSGPKPPTHCLVFGAVVGATLFTVGKQLLALYLSTAAVVSAYGAAGSLVVLLMWIY FSSAVLLFSAASARALHETRTAASVPAGS" gene 191082..191924 /locus_tag="Dtpsy_0170" /db_xref="GeneID:7383434" CDS 191082..191924 /locus_tag="Dtpsy_0170" /note="PFAM: 17 kDa surface antigen; KEGG: ajs:Ajs_0152 17 kDa surface antigen" /codon_start=1 /inference="protein motif:PFAM:PF05433" /transl_table=11 /product="17 kDa surface antigen" /protein_id="YP_002551655.1" /db_xref="InterPro:IPR008816" /db_xref="GI:222109391" /db_xref="GeneID:7383434" /translation="MHSTSASPAAAPSAASLKWLWAAVGVLGVSVLALGGTLLAQNLR GGPPAGDSAAGGPAATLAATAPRTPEAEVLNEKAPPAQSQQAMAALDSGANPTARRAA APPSPQAYPQDDPQTYAQGYPQPGASPSPVPTQRGEPLQRAVAQRSAAPVCGTCGRVE SVRAVEQAAPATGVGAVAGGVLGGVLGNQIGKGSGRTAATVLGAVGGGYVGHKVEQRA RTTTVYQMRVRMDDGSVRNFTRAQPLAEGTAVRVQGKSLRVDPGADADRAGVEPVRVV DRGY" sig_peptide 191082..191204 /locus_tag="Dtpsy_0170" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.701) with cleavage site probability 0.418 at residue 41" gene complement(192095..192868) /locus_tag="Dtpsy_0171" /db_xref="GeneID:7383435" CDS complement(192095..192868) /locus_tag="Dtpsy_0171" /note="PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: ajs:Ajs_0153 ferredoxin--NADP(+) reductase" /codon_start=1 /inference="protein motif:PFAM:PF00175" /transl_table=11 /product="oxidoreductase FAD/NAD(P)-binding domain protein" /protein_id="YP_002551656.1" /db_xref="InterPro:IPR001221" /db_xref="InterPro:IPR001433" /db_xref="InterPro:IPR001709" /db_xref="InterPro:IPR008333" /db_xref="GI:222109392" /db_xref="GeneID:7383435" /translation="MSAFHEERVLTVHHWTDRLFSFTTTRDPALRFSNGHFTMIGLKV DGKPLLRAYSIVSANYEEHLEFLSIKVPDGPLTSRLQHIQVGDSIIVGKKPTGTLLID YLLPAKRLYLMSTGTGLAPFLSVIRDPETYEKFEQVILLHGVRQVAELAYHDYITKEL PQHEFLGELITKQLKYYPTVTREPFRNQGRIPDLIDSGKLAADLGLPELNPLEDRVML CGSPEMLASLKELLEKRDFEEGNTTRPGDFVIERAFVEK" gene 193128..194315 /locus_tag="Dtpsy_0172" /db_xref="GeneID:7383436" CDS 193128..194315 /locus_tag="Dtpsy_0172" /note="PFAM: Extracellular ligand-binding receptor; KEGG: ajs:Ajs_0154 extracellular ligand-binding receptor" /codon_start=1 /inference="protein motif:PFAM:PF01094" /transl_table=11 /product="Extracellular ligand-binding receptor" /protein_id="YP_002551657.1" /db_xref="InterPro:IPR000709" /db_xref="InterPro:IPR001828" /db_xref="GI:222109393" /db_xref="GeneID:7383436" /translation="MHKPFTPLLALLFAGGAYAQGAYTIGEINSYKAQPAFLEPYKKG MELAVEQINAAGGIQGKQLRLVTRDDNATPGDAVRAAEELIAREKVDVLMGSFLSHVG LALTDFAQQKKRFFLAAEPLTDKIVWEHGNRYTFRLRPSTYMQVAMLVPEAVALKKKR WAIVYPNYEYGQSAVATFKQLLKAAQPDVEFVAEQATPLGKVDAGSVAQALEDAKPDA IFNVLFAADLAKFVREGNTRGLFAGRSVVSLLSGEPEYLDTLKSETPEGWIVTGYPWY AIQTPEHKAFLDAYMKRFKDYPRAGSVVGYNAVQSVAAGLAKAGSADTEKLITAFRGL QVATPFGPITYRTQDHQSTMGAYVGKTALRMGKGVMVDFTYRDGAKYQPSDAEVKRLR KDE" sig_peptide 193128..193187 /locus_tag="Dtpsy_0172" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.984 at residue 20" gene 194448..196355 /locus_tag="Dtpsy_0173" /db_xref="GeneID:7383437" CDS 194448..196355 /locus_tag="Dtpsy_0173" /note="PFAM: inner-membrane translocator; KEGG: ajs:Ajs_0155 inner-membrane translocator" /codon_start=1 /inference="protein motif:PFAM:PF02653" /transl_table=11 /product="inner-membrane translocator" /protein_id="YP_002551658.1" /db_xref="InterPro:IPR001851" /db_xref="GI:222109394" /db_xref="GeneID:7383437" /translation="MDVSGLLAQLLNGLAGASTLFLVAAGLSLIFGVMRIVNFAHGSF YMLGLYLAYALVERLGDALGFWPALLLAPLAVGLLGAAVEVLLLRRIYRAPELLQLLA TFALVLVIKDAALWLWGPEELFGPRAPGLEGAVDLLGRRFPAYDLFLIAVGPLVLVLL TLLLTRTRWGTLVRAATQDREMVGALGVNQAWLFTSVFALGALLAGLGGALQLPREPA SLELDMLTIGAAFVVVVVGGMGSLPGAFVAALVIAELKAVCIWLGVVEVAGVEVAFPR LTLVVEFLVMAAVLIWRPWGFMGRPQAVARGVGTPEAPLRQAGQGATAAWCALVLALA LLPLAVEPGSYATVLLTDIAIAALFAASLHCILGPGGLHSFGHAAYFGLGAYGAALLV RWLDWPMGMALLLGPLVAAAGALVYGWFCVRLSGVSLTMLTLAFAQITWAIAYQWDGF TGGSNGITGVWPPQWAAQGAGFYWLVLALAVAGIYLLRRMLFAPLGWALRAARDSALR ADAIGIDVRGVQWAAFVVAGLLAGLAGALYVFSKGSVAPDALGVSRSVDGLVMVLLGG MQQLAGPVVGAGVFTWLHDTVARSTDYWRALLGGIMLLLVLLFPQGISGFAQVWKALA AIKNKAQEGAP" gene 196352..197104 /locus_tag="Dtpsy_0174" /db_xref="GeneID:7383438" CDS 196352..197104 /locus_tag="Dtpsy_0174" /note="PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_0156 ABC transporter related" /codon_start=1 /inference="protein motif:PFAM:PF00005" /transl_table=11 /product="ABC transporter related" /protein_id="YP_002551659.1" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR003593" /db_xref="GI:222109395" /db_xref="GeneID:7383438" /translation="MSLLQVQELRKSFGGVQAVQGVSFALQAGELLALIGPNGAGKST TFNLVGGQLLPDAGRVLLQGQDITGLAPRAVWRRGVGRTFQIAQTFASFTVLQNVQMA LLSHDRQAWRWWRRADAHRPHDALALLEQVGMAAQAQRPCSALAYGDVKRVELAMALA HAPALLLMDEPTAGMAPAERLALMQLVQRIARERHMGVLFTEHSMDVVFGLADRVAVL VRGQLLAEGTPQQIQDDARVQAAYLGTELESA" gene 197101..197880 /locus_tag="Dtpsy_0175" /db_xref="GeneID:7383439" CDS 197101..197880 /locus_tag="Dtpsy_0175" /note="PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_0157 ABC transporter related" /codon_start=1 /inference="protein motif:PFAM:PF00005" /transl_table=11 /product="ABC transporter related" /protein_id="YP_002551660.1" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR017871" /db_xref="GI:222109396" /db_xref="GeneID:7383439" /translation="MNNQNDSASRLPDKALVAKTPLLEVADLHAWYGAAHILHGVSLS VGHGEVVALMGRNGAGKSTTLKGIAGLMERRSGRIEFLGQRIDRQPPHAIARRGLGYV PEDRRIFTDLTVLENLEVGRQRPRHWPDGTPAPLWTPERLFTLFPNLGEMPDRPGGRM SGGEQQMLTVARTLMGQPLLVLLDEPSEGVAPVIVQQMARTIRALKAQGIGILLSEQN LPFAEAVADRACVLEQGRIVYSAGMAQLAGDAAARRQYLGV" gene complement(197911..198828) /locus_tag="Dtpsy_0176" /db_xref="GeneID:7383440" CDS complement(197911..198828) /locus_tag="Dtpsy_0176" /note="PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_0158 LysR family transcriptional regulator" /codon_start=1 /inference="protein motif:PFAM:PF03466" /transl_table=11 /product="transcriptional regulator, LysR family" /protein_id="YP_002551661.1" /db_xref="InterPro:IPR000847" /db_xref="InterPro:IPR005119" /db_xref="GI:222109397" /db_xref="GeneID:7383440" /translation="MSPFDRMHIFARVAELASFTQAAEALGIPKASASTAVQQLETQL GTRLLHRTTRRVQLTQDGQAYYERCKDLLADVDELQSMFQHPDGAGLKGRVRIDMSTG MARNVVVPRLPELLARHPGLKVELSSTERRVDVVREGFDCVLRTGAVVDSSLVARPLG LVRLVNCASPAYLRAHGTPRSLADLPGHRLVHFVNTLGARSAGFEAVVDGALVLTPMQ GALTVNNAEAYMAGCLAGLGLIQVPHLGVVDLLARGDLVEVLPQLAAPPMPLTLMYAN RRNLPRRVRTVMDWLAQVVAEHLAQVAAA" gene 198938..199747 /locus_tag="Dtpsy_0177" /db_xref="GeneID:7383441" CDS 198938..199747 /locus_tag="Dtpsy_0177" /note="PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ajs:Ajs_0159 short-chain dehydrogenase/reductase SDR" /codon_start=1 /inference="protein motif:PFAM:PF00106" /transl_table=11 /product="short-chain dehydrogenase/reductase SDR" /protein_id="YP_002551662.1" /db_xref="InterPro:IPR002198" /db_xref="InterPro:IPR002347" /db_xref="InterPro:IPR002424" /db_xref="InterPro:IPR013968" /db_xref="GI:222109398" /db_xref="GeneID:7383441" /translation="MAHAASSSSSTVTAGIATRPVIALITGGSRGLGRNAALHVARSG TDVILTYRSQAAEAQAVVAEIEALGRRAVALPLDVAASATFTAFAGQVRDVLARHWQR ERFDFLVNNAGVGVYASFMETTEAQFDDMVNIHLKGVFFLTQKLLPLMNDGGRILNVS SGLARFALPGYAAYAAMKGGVEVLTRYLAKELGARGIAVNVVAPGAIETDFGGGAVRD NAQLNAFIAGQTALGRVGLPDDIGGVIAALLQPGTGWVNAQRIEASGGMFV" gene complement(199876..201621) /locus_tag="Dtpsy_0178" /db_xref="GeneID:7383442" CDS complement(199876..201621) /locus_tag="Dtpsy_0178" /note="PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; SMART: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: ajs:Ajs_0160 methyl-accepting chemotaxis sensory transducer" /codon_start=1 /inference="protein motif:PFAM:PF00015" /transl_table=11 /product="methyl-accepting chemotaxis sensory transducer" /protein_id="YP_002551663.1" /db_xref="InterPro:IPR000010" /db_xref="InterPro:IPR003660" /db_xref="InterPro:IPR004089" /db_xref="GI:222109399" /db_xref="GeneID:7383442" /translation="MKNLSIGTRLGGGFALVLLLMALMTAFGVWRLQTVAQATNEMTQ QPLAVERMISDWYRYVYSAARRTSAIVKSTDPSLGQFFAADTATSTRESAELQKRIET LLTSEEEKALWADIQKARVTYLSSRDQAVKAKAEGQLEEAERLLTQVYLPATDQYVAL IQRLLDMQRSRIDATAQGINVTYGQSRLWLIVLGVLGLGAGALCAWWLTRGITRPLAQ AVQVARAVAANDLTSRVQVDSRDETGQLLQALQEMNASLSQVVARVRSGTDGIATASS QLDAGNQDLSSRTEEQASSLQETAASMEQLTSTVRQNADNARQANQLASSAAQTATQG GQVVAGVVQTMGAINASSRKISDIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAV VAGEVRALAQRSAAAAKDIKGLIGDSVAKVEEGSHQVEEAGRTMDAIVQSVQRVSDLV AEITAASQEQSAGIEQVHQAITQMDQVTQQNAALVEEATAATGSLKAQAGQLAQAVSV FRVEGLQAAQTATATATAAAAPAPLRRPAPATTTTTTKPPAAARTLAAPARPPAAAKA APATARHSDDDWEAF" sig_peptide complement(201511..201621) /locus_tag="Dtpsy_0178" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.998) with cleavage site probability 0.538 at residue 37" gene complement(201667..203205) /locus_tag="Dtpsy_0179" /db_xref="GeneID:7383443" CDS complement(201667..203205) /locus_tag="Dtpsy_0179" /note="KEGG: ajs:Ajs_0161 Mg chelatase, subunit ChlI; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase" /codon_start=1 /inference="protein motif:TFAM:TIGR00368" /transl_table=11 /product="Mg chelatase, subunit ChlI" /protein_id="YP_002551664.1" /db_xref="InterPro:IPR000523" /db_xref="InterPro:IPR001208" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR004482" /db_xref="InterPro:IPR011704" /db_xref="GI:222109400" /db_xref="GeneID:7383443" /translation="MSLALVQSRALLGLHAPAVTVEVHLANGLPSFALVGLADVEVKE ARERVRSALQNAGLEFPANKKITVNLAPADLPKDSGRFDLPIALGILAASGQIDAARL DGWEFAGELSLSGLLRPVRGALATSLALRALAQPVRTVLPPGSAEEAALVPGTEIYRA HHLLDVVRQFVPVPPPNDDGADDGGWQRLQPAPPAPATDGPDLADVKGQAAAKRALEI AAAGGHGLLLVGPPGSGKSMLAQRFAGLLPPMGVEQALESAAIASLAGRFSPAQWMQR TTASPHHSCSAIALVGGGSPPRPGEISLAHEGVLFLDEFPEFARSALEALREPLESGR ITIARAAQRAEFPARFQLVAAMNPCPCGFAGSHQRACRCTPDQIARYQGKLSGPLLDR IDLHVEVPALPPEELLGAPPGEPSGAVRERVARAHERALQRQGKANQALQGQELEQMA ALDAPAARFLQAAAARLAWSARSTHRALKVARTIADLSGCETVGAAHVAEAVQYRRAL RAPA" gene 203424..204155 /locus_tag="Dtpsy_0180" /db_xref="GeneID:7383444" CDS 203424..204155 /locus_tag="Dtpsy_0180" /note="PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0162 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF09694" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551665.1" /db_xref="InterPro:IPR010239" /db_xref="GI:222109401" /db_xref="GeneID:7383444" /translation="MHRFSLKTLALAFAAVAVPGLASAQLTANVSLTSNYKFRGQDQD VNRIKAVNPAIQGGFDYSFGDSGFYVGNWNSSVDWLSGNSIEADFYGGYKFKAGEVDL DVGALTYVYPGNTSGNTTELYGAATYGPFTAKYSHTVSKDYFGWAGAKTSSNRGRNTG YLNLAFAQEVAPSVTLKASVGYTRFASDIKDLGVPNYVDYSVGGAYDFGAGLSLSAAI AGANKKGFFGDANKARLIVSLTKTL" sig_peptide 203424..203498 /locus_tag="Dtpsy_0180" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.960 at residue 25" gene 204176..204514 /locus_tag="Dtpsy_0181" /db_xref="GeneID:7383445" CDS 204176..204514 /locus_tag="Dtpsy_0181" /note="PFAM: nitrogen regulatory protein P-II; KEGG: ajs:Ajs_0163 nitrogen regulatory protein P-II" /codon_start=1 /inference="protein motif:PFAM:PF00543" /transl_table=11 /product="nitrogen regulatory protein P-II" /protein_id="YP_002551666.1" /db_xref="InterPro:IPR002187" /db_xref="InterPro:IPR002332" /db_xref="InterPro:IPR017918" /db_xref="GI:222109402" /db_xref="GeneID:7383445" /translation="MKMVTAIIKPFKLDEVRESLSDIGVQGITVTEVKGFGRQKGHTE LYRGAEYVVDFLPKVKIEAAVADELVERVIEAIEGAARTGKIGDGKIFVAHLEQVVRI RTGETGQEAL" gene 204561..205982 /locus_tag="Dtpsy_0182" /db_xref="GeneID:7383446" CDS 204561..205982 /locus_tag="Dtpsy_0182" /note="TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: ajs:Ajs_0164 ammonium transporter" /codon_start=1 /inference="protein motif:TFAM:TIGR00836" /transl_table=11 /product="ammonium transporter" /protein_id="YP_002551667.1" /db_xref="InterPro:IPR001905" /db_xref="InterPro:IPR002229" /db_xref="InterPro:IPR010256" /db_xref="GI:222109403" /db_xref="GeneID:7383446" /translation="MKKLFASLLIGASLLAGGAGALAQTPDAAAAASEPVAVAPAPAA EPVAAPAAAPAPAPAAAAPAAPKVDSGDTAWMLTSTLLVILMIIPGLALFYGGLGRTK NMLSVLMQVFVIFALVSLLWSIYGYSLAFSGEGQFVGNLSKLFLKGVSQETFGALATI PEYVFIAFQGTFAAITVALIVGSFAERMRFAAVLIFALLWFTFSYVPMAHIVWGGGLL AADGALDFAGGTVVHINAGIAGLVGAYMVGKRIGFGKEAFTPHSLTLTMVGASLLWVG WFGFNAGSAGAANALAGLAFVNTVLATSAATLSWIAGEALHKGKASMLGAASGAVAGL VAVTPAAGFVGPMGSIAIGLIAGLVCLWGVGGLKKMLNVDDAFDVFGVHGVGGIVGAI LTGVFAAQGLGGTGGLTPDTFSMGAQVWVQVKSVLFTIVWSGVVSFIAYKVADLLVGL RVSEEAEREGLDITSHGETAYHR" sig_peptide 204561..204632 /locus_tag="Dtpsy_0182" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.984 at residue 24" gene 206122..207072 /locus_tag="Dtpsy_0183" /db_xref="GeneID:7383447" CDS 206122..207072 /locus_tag="Dtpsy_0183" /note="PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: ajs:Ajs_0165 gluconolactonase" /codon_start=1 /inference="protein motif:PFAM:PF08450" /transl_table=11 /product="SMP-30/Gluconolaconase/LRE domain protein" /protein_id="YP_002551668.1" /db_xref="InterPro:IPR005511" /db_xref="InterPro:IPR013658" /db_xref="GI:222109404" /db_xref="GeneID:7383447" /translation="MNTAWTPLAAAPAQLGESPFWHPLESRLYWVDIAGRALWRSGAH GSDAQCWPLPAEPGCIAPARQGGTPAGLVVALRDRICHAPRWGGPLLTMAHLPIDPAT ERANDGKCDALGRLWVGTVHEPAQGPRQPVAALYCIDLRGRDQGGPDAPTVRRMLDGV ATANGLAWSPDGRTLYWSDTPSHTIRAWDCNAQLEPIGAPRVLHRFATRDEAVPYGGR PDGAAVDAEGAYWCALYEGARVLRLSPRGEVLAELPTPLSCPTMPCVGGPDGHTLFVT SARKGRSADELARWPQSGQVLSTRVAVAGLPVAWCEIGQR" gene 207176..208285 /locus_tag="Dtpsy_0184" /db_xref="GeneID:7383448" CDS 207176..208285 /locus_tag="Dtpsy_0184" /note="PFAM: FAD linked oxidase domain protein; KEGG: ajs:Ajs_0166 FAD linked oxidase domain-containing protein" /codon_start=1 /inference="protein motif:PFAM:PF01565" /transl_table=11 /product="FAD linked oxidase domain protein" /protein_id="YP_002551669.1" /db_xref="InterPro:IPR006094" /db_xref="GI:222109405" /db_xref="GeneID:7383448" /translation="MDAALRQIIDRVRDSADRRSAVRICGGGTKDFHGPGAPQHAGEP LDMRPLAGIVSYEPSELVVTALAGTPLAELEALLARHGQSLPFEPPRFAEGGTVGGMV AAGLSGPARASVGAVRDYVLGVEIINGRGELLRFGGQVMKNVAGYDVSRLMAGAWGQL GVITEVSLKVLPVPPAEATLRFDCDQAEALRRLNAWGGQPLPLNASCWVEDAGRGQLY VRLRGAQAAVQAACRSMGGELQDAPTVPDDWQACRDQRLPWFAARAADHALWRLSVPQ TAPVLALPAGVAPPLVEWHGGLRWVQALPQHGDALHALAAEVGGSASLFIAASADGIS ARAIFDANSAALAAIHQRLKQAFDPAGIFNPGRLV" gene 208288..209085 /locus_tag="Dtpsy_0185" /db_xref="GeneID:7383449" CDS 208288..209085 /locus_tag="Dtpsy_0185" /note="PFAM: protein of unknown function DUF1275; KEGG: ajs:Ajs_0167 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF06912" /transl_table=11 /product="protein of unknown function DUF1275" /protein_id="YP_002551670.1" /db_xref="InterPro:IPR010699" /db_xref="GI:222109406" /db_xref="GeneID:7383449" /translation="MRLLRHLTGRHRTTVTNRTLGLLLAFNAGAINAGGFLVVHMYTS HMTGFLSLVADNLVLGNMTLVLSAIGTLWAFMSGAGSTAILVNWARHQHLRSGFALPL LLEAVLMLLFGLMGAITLGWRTPFAVPLTVLLLAYIMGLQNAVVTKMSSAQIRTTHMT GIVTDLGIEMGKALYWNRSGTPRESQVHANQTRLRMFASLLGMFTAGGVVGAAGFKYV GFIWVVPLASILLALSLPPLAADRQRLAQLWRARRAPAPAEDAPARR" sig_peptide 208288..208389 /locus_tag="Dtpsy_0185" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.974) with cleavage site probability 0.811 at residue 34" gene 209111..210349 /locus_tag="Dtpsy_0186" /db_xref="GeneID:7383450" CDS 209111..210349 /locus_tag="Dtpsy_0186" /note="PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: ajs:Ajs_0168 glycolate oxidase iron-sulfur subunit" /codon_start=1 /inference="protein motif:PFAM:PF02754" /transl_table=11 /product="protein of unknown function DUF224 cysteine-rich region domain protein" /protein_id="YP_002551671.1" /db_xref="InterPro:IPR001450" /db_xref="InterPro:IPR004017" /db_xref="InterPro:IPR017900" /db_xref="GI:222109407" /db_xref="GeneID:7383450" /translation="MQTQLAPQYQGTPEGQEAEAILRKCVHCGFCTATCPTYQLLGDE LDGPRGRIYLIKQVLEGAEPTRKTQLHLDRCLTCRNCESTCPSGVQYGHLVDIGRRIV EEKVPRPRGEAAARWMLKEGLPSPLFAPAMKVGQAVRGLLPERLRAKVPPRQDAGAWP TRSHARKVLMLEGCVQPSMAPNINNATARVLDAAGIQTVVAREAGCCGAVKFHLNDQE GGLAQMRANIDAWWPYVERGEVEAIVMNASGCGVTVKEYGHLLRNDAQYAEKAARVSA LTRDLSELLPDLVERLRGRIQPPAAPLAYHPPCTLQHGQKLRGGVERHLAALGFELRV ARTESHLCCGSAGTYSVLNPELSYQLRDRKLGALGEAFTEQPPAAILSANMGCITHLQ SGTGIPVKHWVEVLDAALLA" gene 210411..211280 /locus_tag="Dtpsy_0187" /db_xref="GeneID:7383451" CDS 210411..211280 /locus_tag="Dtpsy_0187" /note="PFAM: ProQ activator of osmoprotectant transporter ProP; KEGG: ajs:Ajs_0169 ProQ activator of osmoprotectant transporter ProP" /codon_start=1 /inference="protein motif:PFAM:PF04352" /transl_table=11 /product="ProQ activator of osmoprotectant transporter ProP" /protein_id="YP_002551672.1" /db_xref="InterPro:IPR007447" /db_xref="GI:222109408" /db_xref="GeneID:7383451" /translation="MNDTVNAPAPIHEEGVPPIAAAVPAAEGHATPESPASASPAPAA DSGAARAPRANRRGGRGRAGGRRESGAQATGDAPQAGAKGGPAAGAPRRTHPLLEQLA GWYPHLFGAQFLPLKRGIFQDLLAAHGEAIDKDALKLALSIHTRSTRYLNAVAQGMKR HDLQGQPVEDMAPEHVHHALLEVFRRRKPQDGEDLTAKLRRRIAQAFEASGLTREAYD ALVRGRDEKANALLDEAFAEVAERDAKAEALLRAFEASGQTPEAFADMYGLPARQAAQ MLERARQRRAPGA" gene 211380..211769 /locus_tag="Dtpsy_0188" /db_xref="GeneID:7383452" CDS 211380..211769 /locus_tag="Dtpsy_0188" /note="PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ajs:Ajs_0170 glyoxalase/bleomycin resistance protein/dioxygenase" /codon_start=1 /inference="protein motif:PFAM:PF00903" /transl_table=11 /product="Glyoxalase/bleomycin resistance protein/dioxygenase" /protein_id="YP_002551673.1" /db_xref="InterPro:IPR004360" /db_xref="GI:222109409" /db_xref="GeneID:7383452" /translation="MTTPSSSQAINWFEIPCADLGRAQSFYERMLDRPMRREDFGSEP MALFSKDDPATGGCLVAGPQRRAAPDAGVRIYLDCEPSVEAALARVVPAGGQVVDACT QLPQGMGYIAHVRDTEGNTICLHAMAR" gene 211862..212332 /locus_tag="Dtpsy_0189" /db_xref="GeneID:7383453" CDS 211862..212332 /locus_tag="Dtpsy_0189" /note="PFAM: transcription activator effector binding; KEGG: ajs:Ajs_0171 transcription activator, effector binding" /codon_start=1 /inference="protein motif:PFAM:PF06445" /transl_table=11 /product="transcription activator effector binding" /protein_id="YP_002551674.1" /db_xref="InterPro:IPR010499" /db_xref="GI:222109410" /db_xref="GeneID:7383453" /translation="MTPITVQVPAFSVAGVAVRTCNRDEAQPERARIGALWDQFFTES WARQLPGPGADGRLYGVYSAYESDQHGAFDVTAGVSAAVQADPPVGAARIEVQPGSYL VFHCEGPMPQMVLDAWAAAWRYFEEHPEVRRRFDTDFECYEGPECVALHIGVLL" gene 212410..213138 /locus_tag="Dtpsy_0190" /db_xref="GeneID:7383454" CDS 212410..213138 /locus_tag="Dtpsy_0190" /note="PFAM: Helix-turn-helix type 11 domain protein; KEGG: ajs:Ajs_0172 helix-turn-helix, type 11 domain-containing protein" /codon_start=1 /inference="protein motif:PFAM:PF08279" /transl_table=11 /product="Helix-turn-helix type 11 domain protein" /protein_id="YP_002551675.1" /db_xref="InterPro:IPR001034" /db_xref="InterPro:IPR013196" /db_xref="GI:222109411" /db_xref="GeneID:7383454" /translation="MRRADRLFQIVQLIRGRRLSTAAFLAGRLEVSLRTIYRDVADLQ HQGIPIEGEAGVGYRLGAGFELPPLMFSQGEANALVAAARLAQTWVDGGMAREIEGAL GKILSVLPPAARAAAEAQALYAPGSGLDTRAQAALQALREAVQSCHVVRLDYADVQGR PSLRRVRPLGCFYWGKVWTLSAWCELRDDFRGFRIDRIAAFEVLDERFRQEPGKTLAD LLRQVEARMRDCPAEGLDGAAFSS" gene complement(213405..213890) /locus_tag="Dtpsy_0191" /db_xref="GeneID:7383455" CDS complement(213405..213890) /locus_tag="Dtpsy_0191" /EC_number="1.11.1.9" /note="PFAM: glutathione peroxidase; KEGG: ajs:Ajs_0173 glutathione peroxidase" /codon_start=1 /inference="protein motif:PRIAM:1.11.1.9" /transl_table=11 /product="Glutathione peroxidase" /protein_id="YP_002551676.1" /db_xref="InterPro:IPR000889" /db_xref="GI:222109412" /db_xref="GeneID:7383455" /translation="MTTAYDFDATRIDGAPQPLSDFRGQVLLIVNTASACGFTPQFTG LQALHERYGPRGLVVLGFPCNQFGHQDPGSNDAIAGFCQRNYGVQFPMMSKIDVNGSD AHPLYRWLTGEAPGVLGTKAIKWNFTKFLVGRDGQVIRRYAPQEAPEKLTVDIEAALA A" gene complement(213887..214828) /locus_tag="Dtpsy_0192" /db_xref="GeneID:7383456" CDS complement(213887..214828) /locus_tag="Dtpsy_0192" /note="PFAM: protein of unknown function DUF6 transmembrane; KEGG: ajs:Ajs_0174 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF00892" /transl_table=11 /product="protein of unknown function DUF6 transmembrane" /protein_id="YP_002551677.1" /db_xref="InterPro:IPR000620" /db_xref="GI:222109413" /db_xref="GeneID:7383456" /translation="MQSPLPALALLFNAFIWGLSWWPFRQMHGAGLHPLWATALMYGA ILLVLLALRPGISAQLRQHRSLWLLALCSGLNNVAFNWAITIGDVVRVILLFYLMPAW SVLLAWRFLGERPTPQALARLLLAFSGVLLVLWPAEGGLPRLLAALTLADLLAILGGF TFAVTNVTLRRLHAVPGQARMVAMFGGCMLMALLAAQLGRSMGLVPPFPPLSATWAWV AALLAVVLLIGNWALQFGAARLAAGTTAIIMLSEVVFASGSSTLLGAAQLTGGTLAGG ALILLAAGWSVWRPRVHAAGTPHAPSDKVTDTRPEAP" gene complement(214980..216257) /locus_tag="Dtpsy_0193" /db_xref="GeneID:7383457" CDS complement(214980..216257) /locus_tag="Dtpsy_0193" /note="PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_0175 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF07690" /transl_table=11 /product="major facilitator superfamily MFS_1" /protein_id="YP_002551678.1" /db_xref="InterPro:IPR011701" /db_xref="GI:222109414" /db_xref="GeneID:7383457" /translation="MKRGFYTIMSAQFFSSLADNALFVTAVELLRTSGAPEWQRAALV PMFALFYVVLAPWVGAFADSMPKGRVMFISNAIKVVGCLMMLFGHHPLLAYAVVGLGA AAYSPAKYGILTELLPASQLVKANGWIEGLTIASIILGVLVGGQLVAPHIASHLLALD MPGIDLGIDLAAEAAILALVPVYMLAAWFNLRIPHTGVEMRPLPPNPLALLPDFWTCN GRLWRDKLGQISLSTTTLFWGVSGNLRYIVLAWSAAALGYSTTQASALVGVVAIGTAA GAVAASLHMRLDMATRVIPMGIAMGLLVILMNVISNIWLAIPFLILLGGLGGFLVVPM NALLQHRGHNLMGAGRSIAVQNFNEQAAILGMGAFYSLSTKFGLSAFGAITAFGMLVA GVMWLIGRWHAHNVRSHPEEVEHLLSIARHDHH" sig_peptide complement(216201..216257) /locus_tag="Dtpsy_0193" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.678) with cleavage site probability 0.632 at residue 19" gene 216398..217495 /locus_tag="Dtpsy_0194" /db_xref="GeneID:7383458" CDS 216398..217495 /locus_tag="Dtpsy_0194" /EC_number="5.1.1.1" /note="KEGG: ajs:Ajs_0176 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein" /codon_start=1 /inference="protein motif:TFAM:TIGR00492" /transl_table=11 /product="alanine racemase" /protein_id="YP_002551679.1" /db_xref="InterPro:IPR000821" /db_xref="InterPro:IPR001608" /db_xref="InterPro:IPR011079" /db_xref="GI:222109415" /db_xref="GeneID:7383458" /translation="MPRPILATIHPAAVHHNLERARRAAPDARVWAVVKANAYGHGIE RVFEGLRAADGFALLDLAEAERVRALGWRGPILLLEGVFEPRDLELCSRLGLWHAVHC DAQIDWLAAHKTQVPHRVFLKMNSGMNRLGFTPERYRSAWARLNALPQVDEISCMTHF SDADGPRGIAHQVQAFQTATRDLPGERCIANSAALLRHGGDAQVRLDWVRAGIVLYGS APDHPERRAADWDLQPTMTLASRIIGVQQLQAGDTVGYGSRFTAQGPLGIGVVACGYA DGYPRHCDTGTPVLVNGVRTRTIGRVSMDMLAVDLTPVPGAGLGAEVTLWGRAANGAV LPIDEVAQAGGTIGYELMCALAPRVPVVVQD" gene 217504..218337 /locus_tag="Dtpsy_0195" /db_xref="GeneID:7383459" CDS 217504..218337 /locus_tag="Dtpsy_0195" /note="KEGG: ajs:Ajs_0177 hypothetical protein" /codon_start=1 /inference="ab initio prediction:Prodigal:1.4" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551680.1" /db_xref="GI:222109416" /db_xref="GeneID:7383459" /translation="MVRVRGRTGASWRGMRLPQRLQEGLRQRHALRLHGWCIGSLILG VMWAVSHAQMALGMPSLALRYLVTLGVGYGVYLLVLRLWAAWLLRRRSDAGDAPDGLD LLPDAGWPAGPGPQGPAPPLHGGGGDFGGAGATGQWDAPAADGAGGTGWGGDLGDAAS GALEAAGSADEAAVVVVPVVAIFVVGVALLGGAGALAWLYFGSEVLLAVAVELAFSVA SARALMGAERAGWLGAAWRMTGKPLLGALLCAVALGAALDHWLPQARSLPHAVQLLRG R" gene 218574..219593 /locus_tag="Dtpsy_0196" /db_xref="GeneID:7383460" CDS 218574..219593 /locus_tag="Dtpsy_0196" /EC_number="1.11.1.5" /note="PFAM: Di-haem cytochrome c peroxidase; KEGG: rme:Rmet_4968 di-haem cytochrome c peroxidase" /codon_start=1 /inference="protein motif:PRIAM:1.11.1.5" /transl_table=11 /product="Cytochrome-c peroxidase" /protein_id="YP_002551681.1" /db_xref="InterPro:IPR004852" /db_xref="InterPro:IPR009056" /db_xref="GI:222109417" /db_xref="GeneID:7383460" /translation="MQSQSPSSRPAARFFLGIVSAAALLSMGSAGAQEPVQPIVPHKV TNPAQVTLGKKLWFDPRLSRSGFISCNSCHNLSMGGSDNLKTSIGDKWQKGPINSPTV LNSSLNLAQFWDGRAKDLKEQAGGPIANPGEMAFSHDLAVDMLRSIPQYVAEFKRVFG HDKLTIDEVTAAIAAFEETLVTPNARFDQWLKGDKKAITAQELRGYQLFKTSGCVACH NGPNLGGNSFQKMGLVEAYKTDNPAEGRSAVTGNDAERFNFKVPTLRNVELTYPYFHD GAADTLAEAVDTMGRIQLGKKFTAQENADIVAFLKTLTGDQPRISLPILPPSSDATKR PQPFD" sig_peptide 218574..218672 /locus_tag="Dtpsy_0196" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.995 at residue 33" gene complement(219687..220301) /locus_tag="Dtpsy_0197" /db_xref="GeneID:7383461" CDS complement(219687..220301) /locus_tag="Dtpsy_0197" /note="PFAM: Glutathione S-transferase domain; KEGG: ajs:Ajs_0178 glutathione S-transferase domain-containing protein" /codon_start=1 /inference="protein motif:PFAM:PF02798" /transl_table=11 /product="Glutathione S-transferase domain protein" /protein_id="YP_002551682.1" /db_xref="InterPro:IPR004045" /db_xref="InterPro:IPR004046" /db_xref="GI:222109418" /db_xref="GeneID:7383461" /translation="MTSLTLYFTPGTCAQAVRIALEEAQAPYTLVRVDFASQQQRSPE YLAVNPKGRVPALVTEHGTLTETPALLAYVAQRFADARLAPADPFGFARMQEFHSYLA STVHIAHAHRPRASRWADEPEAQAAMQRKVPANMTECFTLIERHYLGDGPWVLGEQYS VADGYLFTVASWLKSDGVDIAQFPKVHAHSQRMAQRPAVQRALA" gene complement(220450..220632) /locus_tag="Dtpsy_0198" /db_xref="GeneID:7383462" CDS complement(220450..220632) /locus_tag="Dtpsy_0198" /note="KEGG: ajs:Ajs_0179 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0179" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551683.1" /db_xref="GI:222109419" /db_xref="GeneID:7383462" /translation="MPLPTLRPLAAPLLTACALALAACDKKPADPPHLPSVPAVPKPS APAAPLPGAQPASVGS" sig_peptide complement(220561..220632) /locus_tag="Dtpsy_0198" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.996) with cleavage site probability 0.760 at residue 24" gene 220742..222124 /locus_tag="Dtpsy_0199" /db_xref="GeneID:7383463" CDS 220742..222124 /locus_tag="Dtpsy_0199" /EC_number="2.1.1.63" /note="KEGG: ajs:Ajs_0180 DNA repair protein RadA; TIGRFAM: DNA repair protein RadA; SMART: AAA ATPase" /codon_start=1 /inference="protein motif:TFAM:TIGR00416" /transl_table=11 /product="DNA repair protein RadA" /protein_id="YP_002551684.1" /db_xref="InterPro:IPR001553" /db_xref="InterPro:IPR001984" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR004504" /db_xref="GI:222109420" /db_xref="GeneID:7383463" /translation="MAKEKTIFSCTECGGTSPRWLGKCPSCGAWNTLIESVPDAGPGK NRLSGAGQYAGLAQAQAVMPLAAIEATEVARTASGIEELDRVLGGGVVEGGVVLIGGD PGIGKSTLLLQAMDALQRAGLPTLYVTGEESGAQVALRSRRLGLDASQVNVLAEIQLE KILATVEATQPAVCVIDSIQTVYSDQLTSAPGSVAQVRECAAHLTRMAKATGIAVILV GHVTKEGALAGPRVLEHMVDTVLYFEGDTHSSFRLVRAIKNRFGAVNEIGVFAMTEKG LKGVANPSAIFLSQHSEPVPGSCVLVTLEGTRPMLVEIQALVDGGGPSPRRLSVGLER DRLAMLLAVLHRHAGVACADQDVFVNAVGGVRISEPAADLAVMLAITSSLRGKALPKG FIAFGEVGLAGEVRPAPRGQERLKEAAKLGFTVAVVPKANAPKKPIAGLEIHAVERVD EAMTAVRGLD" gene 222194..222634 /locus_tag="Dtpsy_0200" /db_xref="GeneID:7383464" CDS 222194..222634 /locus_tag="Dtpsy_0200" /note="KEGG: ajs:Ajs_0181 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0181" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551685.1" /db_xref="GI:222109421" /db_xref="GeneID:7383464" /translation="MNLRKILIPAGIVVLVIAAYRAYGPQGILTVSGGLVMWGLLHYT RLMNVMQKARNHPIGYVGSAVMLNAKLKAGVNLLHVVAMTRALGQQLSADGQQPELYR WTDGTQSHVTCEFVNGRLVRWELVRPASQEDAGPPAAANPADES" sig_peptide 222194..222262 /locus_tag="Dtpsy_0200" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.707) with cleavage site probability 0.676 at residue 23" gene 222681..223619 /locus_tag="Dtpsy_0201" /db_xref="GeneID:7383465" CDS 222681..223619 /locus_tag="Dtpsy_0201" /note="TIGRFAM: branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV; KEGG: ajs:Ajs_0182 branched-chain amino acid aminotransferase" /codon_start=1 /inference="protein motif:TFAM:TIGR01122" /transl_table=11 /product="branched-chain amino acid aminotransferase" /protein_id="YP_002551686.1" /db_xref="InterPro:IPR001544" /db_xref="InterPro:IPR005785" /db_xref="GI:222109422" /db_xref="GeneID:7383465" /translation="MSPVVPSMADRDGKIWMDGQMVDWRDAKIHVLTHSLHYGCGAFE GVRAYKTEQGTAIFRLEEHTNRLFNSAKILRMTIPFTKDEVNEAQKAVVRENQLESCY LRPLTWIGSEKLGVSPKGNKIHLIVAAWAWGAYLGEEGMQRGIRVKTSSFTRHHVNIT MTQAKASSNYTNSILANTEATDDGYDEALLLDNAGFVSEGSGENVFIIKDGVVYTPDL SAGALNGITRNTVLHICKDLGLEVVQKRITRDEVYIADEAFFSGTAAEITPIRELDRV QIGSGSRGPLTEKIQSAFFDIVNGRNPKYAHWLTKV" gene 223626..223832 /locus_tag="Dtpsy_0202" /db_xref="GeneID:7383466" CDS 223626..223832 /locus_tag="Dtpsy_0202" /note="KEGG: aav:Aave_0265 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Aave_0265" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551687.1" /db_xref="GI:222109423" /db_xref="GeneID:7383466" /translation="MSQAIVELLAQDLNPQGGVYCPSPKADMKLWNGHPKVYLDVAHT GEAKCPYCGTVYRLKAGEVFAGGH" gene complement(223878..224813) /locus_tag="Dtpsy_0203" /db_xref="GeneID:7383467" CDS complement(223878..224813) /locus_tag="Dtpsy_0203" /note="KEGG: dac:Daci_0318 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Daci_0318" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551688.1" /db_xref="GI:222109424" /db_xref="GeneID:7383467" /translation="MTRIPASLFKGVLQLVQPSNLKGSAGYETPAPVMLSGQEDAPEE SQSIPRILWTYWNQAQPDEFVCECIQSWRLQCPDYEVRLTHPGNLDTYVAAGDLPAQF AQMHPTKQADWLRLYLVAHHGGFWLDASTLLTRSLDWLESPFDAAAEFVGFYLEKFTR EARFPVIESWAFGARRDSAFITAWQREFHQALVVEGTQDYLKRQQDLSALRQGIEDPH YLLIHITAQKVLRSQEFTRLALYKAEDTAYYYHQSLRWKWYLLYPQLCRVDAPKISAP IVKLRGGERRHFTEMFGSHGGAVPGSIWHRAFQRP" gene 224883..226016 /locus_tag="Dtpsy_0204" /db_xref="GeneID:7383468" CDS 224883..226016 /locus_tag="Dtpsy_0204" /note="PFAM: glycosyl transferase group 1; KEGG: ajs:Ajs_0185 glycosyl transferase, group 1" /codon_start=1 /inference="protein motif:PFAM:PF00534" /transl_table=11 /product="glycosyl transferase group 1" /protein_id="YP_002551689.1" /db_xref="InterPro:IPR001296" /db_xref="GI:222109425" /db_xref="GeneID:7383468" /translation="MENNLTAAHKPVAQCPTRVLHFVTGGFSGATQVAIDLCLAAQKC PDMEVMLVLRRKRSTSEAKVQALRDQGLQVHVVSNWLHVLTIWELRKLIRAWKPDVVF AHGFSDHIWGRRAAVAEGVPQIFHVEHNSRERYTRRRLKQALALAPFTQASIGVSEGV RTSLIQRGFPSDRCVAICNGIDLARFPQDMLPARWEDREAAILMASRFARQKDHVTLI QALGLLRQQGLAPRLYLAGAGSKLQRQQAERLVRQLGLQDQVHFLGNVSNLPQRLAHT QIFVLSTHWEGMPLALVEGMAAACACIGSDVLGVREVIAHEINGLLVPQSDASAMAAA LQRLLQNPALARQLGEAARRQALIAHGREHMWEHYRALLVKPG" gene complement(226035..226793) /locus_tag="Dtpsy_0205" /db_xref="GeneID:7383469" CDS complement(226035..226793) /locus_tag="Dtpsy_0205" /note="PFAM: glycosyl transferase family 25; KEGG: sdn:Sden_0207 glycosyl transferase family protein" /codon_start=1 /inference="protein motif:PFAM:PF01755" /transl_table=11 /product="glycosyl transferase family 25" /protein_id="YP_002551690.1" /db_xref="InterPro:IPR002654" /db_xref="GI:222109426" /db_xref="GeneID:7383469" /translation="MSNIPIVYINLAKDTERQQRMQAQFSRLGLETFRLPAVRWSELS AEAQAHHFSAELNSHQYFKPMGSGEKGCYCSHITAWRQLLDSAAAAMAVFEDDVRLLP AMPEALRAISTLPADCWDMVKLFGREREKIASRRPLVGSLELITYRRVPSFAAGYVIS RSGARKMLESRQPFGRPVDVDMRFWFENGMRVFGVHPSVVALDDTSKVSSIWPDREPR ALIMQRLRKLKMKMELIWGNARHESDAPHVSETL" gene 226830..228164 /locus_tag="Dtpsy_0206" /db_xref="GeneID:7383470" CDS 226830..228164 /locus_tag="Dtpsy_0206" /note="PFAM: O-antigen polymerase; KEGG: ajs:Ajs_0184 O-antigen polymerase" /codon_start=1 /inference="protein motif:PFAM:PF04932" /transl_table=11 /product="O-antigen polymerase" /protein_id="YP_002551691.1" /db_xref="InterPro:IPR007016" /db_xref="GI:222109427" /db_xref="GeneID:7383470" /translation="MSPYKNFENWGGSLSAFLFFSLSLIVPSGYSYGAAALALLALAG CLQKGSHGVASLDTKILLASLCLTGMLWTAPFDRAWSISGLGIGAKYAFAALTLWALS QRVLSPHAVVWGVAAGAVGALGIAAYQYLVLHWVKAQGFTNAIEYGGIAMYMGIAAWA MAMLGRWRWHQIAALGICGACGVLASLLSESRGSWVTVPLLLAAIWLMAWRNGYRRIA SAAIAAMLIGGAALVLPAYKKFEQRADLAVQEARHYLAEPQKYAETSIGQRLEQWRLA VDLIEERPVAGWGLDGYPKAKQAMVDKGAAHPSVMQYGHAHNEILDMWVKRGLIGLLI LLFFYAAPLYVFWPTPRRLARVDTTLQPRLLALRAAAALLPLAYFGFGWTQVFFAHNS GQMFYIFSLAIFWGAICYLEKTEANTWVVSGHGEVQHKARPVYPNGLRCPLN" sig_peptide 226830..226931 /locus_tag="Dtpsy_0206" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.983) with cleavage site probability 0.932 at residue 34" gene complement(228554..229624) /locus_tag="Dtpsy_0207" /db_xref="GeneID:7383471" CDS complement(228554..229624) /locus_tag="Dtpsy_0207" /note="PFAM: 2-nitropropane dioxygenase NPD; KEGG: ajs:Ajs_0188 2-nitropropane dioxygenase, NPD" /codon_start=1 /inference="protein motif:PFAM:PF03060" /transl_table=11 /product="2-nitropropane dioxygenase NPD" /protein_id="YP_002551692.1" /db_xref="InterPro:IPR004136" /db_xref="GI:222109428" /db_xref="GeneID:7383471" /translation="MNALLQRLQIDLPLFQGPMTGSDTPQLAAAVSQAGGLGFLGCGM RSPQAMREAAAAVRAATAKPFGMNLFVLEQPTPDAATVQAAIDRLAPLYADLGLPPPE APARWCEDFHAQFEALLDARPAVASFTFGILSAAQVRRLKDEADSYVIGTATTLAEAQ AWAEVGADAVVASGMEAGGHRGTFLEDFEASMVGTLALVPQCVDALSIPVIAAGGIMD GRGIAAAQALGAQGVQLGTAFLACPESAIGPAQRTAMAGAQATDTRVTRIYSGRPARG LVNAMMERLAMHEAAVPAYPVQNALTGALRRAAAAQGRADYLSLWAGQGVGAARPLPA AQLVALLAQEWRDVSKSTAARH" gene complement(229621..230517) /locus_tag="Dtpsy_0208" /db_xref="GeneID:7383472" CDS complement(229621..230517) /locus_tag="Dtpsy_0208" /note="PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_0189 LysR family transcriptional regulator" /codon_start=1 /inference="protein motif:PFAM:PF03466" /transl_table=11 /product="transcriptional regulator, LysR family" /protein_id="YP_002551693.1" /db_xref="InterPro:IPR000847" /db_xref="InterPro:IPR001907" /db_xref="InterPro:IPR005119" /db_xref="GI:222109429" /db_xref="GeneID:7383472" /translation="MDLVALEIFRTVAHEGSVTRAAERLGRAQSNVTTRVQQLEEQLG AALFLREGRRMVLTPAGATLQGYAERLLALAEEARQALHPGTPAGHLRIGAMESTAAA RLPAPLAQLHARWPALVLELRTAPSRQLVEQVLAHELDCALVAWPPPGLDEEAPVQRT PVWTESLLLALPASHPPVETPADLRVHTLAAFAHGCTYRRIGEDWMRQATGQAPQVLE LASYPAILACVAGGRCAGVVPEAVVDLLHTPPALRWVPLGPCDTVLVHRTGYATPALG RAASSAARRPGPPRFFFAELTP" gene 230597..231865 /locus_tag="Dtpsy_0209" /db_xref="GeneID:7383473" CDS 230597..231865 /locus_tag="Dtpsy_0209" /note="PFAM: protein of unknown function DUF1228; KEGG: ajs:Ajs_0190 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF06779" /transl_table=11 /product="protein of unknown function DUF1228" /protein_id="YP_002551694.1" /db_xref="InterPro:IPR010645" /db_xref="GI:222109430" /db_xref="GeneID:7383473" /translation="MEPQATPSIDVPAPRGPALHWSERPHAVALAGMLALAVAMGVGR FAFTPLLPMMLHDGVLTLTEGSWLATANYVGYLLGALACMALPWVAPGFYARWHPARL ARAGLVATVLLTLAMALPVAAAWPALRFAAGAASAFVLLNVAAWCMVRLAVLGRPAMG GLIFCGPGVGIVLTGLAASAMVAAQWRAASGWVVFGMLSVLLCVGVWPVVRGRAVKAD PGAQPRAAAQGGNAGTLAARGVHAVAYGLAGLGYIVTATFLPVIARAALPSGSPWPDL FWPMFGAGVAVGAALSTRAPSAWDRRWLLLAAYALQALGIVLGLVWPTPAGFALSSAL VGLPFTAITFYGLQEARRLWPQSADSFASLVTAVYGLGQIAGPPLVAWLLAHADAGQG FARGLALAAGALVAGAAMYGWSAWRWPQRA" gene complement(231873..232601) /locus_tag="Dtpsy_0210" /db_xref="GeneID:7383474" CDS complement(231873..232601) /locus_tag="Dtpsy_0210" /note="PFAM: MOSC domain containing protein; KEGG: ajs:Ajs_0191 MOSC domain-containing protein" /codon_start=1 /inference="protein motif:PFAM:PF03473" /transl_table=11 /product="MOSC domain containing protein" /protein_id="YP_002551695.1" /db_xref="InterPro:IPR005302" /db_xref="GI:222109431" /db_xref="GeneID:7383474" /translation="MNMTPLPSQPTALGTLRAVLTGRAQPYTRPGSRSAIAKQQRSGP VAVGAQGLEDDEQGDLRVHGGPDKAVHCYAWPQYTPWREELAGHAAAQALLAQPGAFG ENFSLDGVQEAQVCIADQWRIGSAVFEVSQGRQPCWKLNDRFQVPDMALRVQRSLRAG WYLRVLQPGTVQAGDTVWLLARPQPAWPIARLLEVIDRRDCTPATLREILALPLPPSW QRLFQRRLDSGQSEAWDARLQGQH" gene complement(232598..233161) /locus_tag="Dtpsy_0211" /db_xref="GeneID:7383475" CDS complement(232598..233161) /locus_tag="Dtpsy_0211" /note="PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: ajs:Ajs_0192 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF00578" /transl_table=11 /product="alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen" /protein_id="YP_002551696.1" /db_xref="InterPro:IPR000866" /db_xref="GI:222109432" /db_xref="GeneID:7383475" /translation="MTAAAPFFAPAPPLQVAHWFNTPEPLTLDSLRGRVVVLHAFQML CPGCVEHGIPQARRVHEAFAQDQLVVIGLHTVFEHHAVQGTPEALQAFIHEYRLRFPI GLDQPDTPRSIPRTMQSLSLSGTPSLVVLDPQGRVRLHHFGHLDDLRLGALLGRLLAE PTPAAPATVPATGCDDGGCPLPDQPRP" gene complement(233246..234472) /locus_tag="Dtpsy_0212" /db_xref="GeneID:7383476" CDS complement(233246..234472) /locus_tag="Dtpsy_0212" /note="PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: ajs:Ajs_0193 integral membrane sensor signal transduction histidine kinase" /codon_start=1 /inference="protein motif:PFAM:PF02518" /transl_table=11 /product="histidine kinase" /protein_id="YP_002551697.1" /db_xref="InterPro:IPR003594" /db_xref="InterPro:IPR003660" /db_xref="InterPro:IPR003661" /db_xref="InterPro:IPR004358" /db_xref="InterPro:IPR005467" /db_xref="GI:222109433" /db_xref="GeneID:7383476" /translation="MSLISPFSRRLYLRIWLAVVGGVLVFAFAVGMAWRWAAEQNQQQ PPSREIRITDAAGRTLVDGVGLRQRRDPSEGVLYRIESATGEVFEMHLSPRPPRPRPD ERGPAAWFRPPFGFLWMLALVGIAVTVGVFPIIRRLLQRLEQLQRSVQRFGEGDLSVR VAEQGHDEVAALARQFNAAAARIETLVQSHKSLLANASHELRSPLTRIRMGLELMQGG TPSPAFRAEIERNIAELDQLVDEILLASRLDSGAADVGTVEPVDLVGLAVEECVRVDA ELHVGSGDDADAMAAPVEVPGVSKLLRRAVRNLLENARRYSQGEITLTLTREGHDAVL RVCDHGPGVPPAQRERIFEPFYRLPGASERSGGVGLGLALVRSIAARHGGSVVCEDRP DGAAGACFTLRLPVTR" sig_peptide complement(234359..234472) /locus_tag="Dtpsy_0212" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.985) with cleavage site probability 0.720 at residue 38" gene complement(234500..235216) /locus_tag="Dtpsy_0213" /db_xref="GeneID:7383477" CDS complement(234500..235216) /locus_tag="Dtpsy_0213" /note="PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: ajs:Ajs_0194 two component transcriptional regulator" /codon_start=1 /inference="protein motif:PFAM:PF00072" /transl_table=11 /product="two component transcriptional regulator, winged helix family" /protein_id="YP_002551698.1" /db_xref="InterPro:IPR001789" /db_xref="InterPro:IPR001867" /db_xref="GI:222109434" /db_xref="GeneID:7383477" /translation="MSSQLLMIEDDHRLAQMVGEYLGQSGLQVTHMADGASGLARLQA PEGGQLPALVILDLMLPDIDGLEVCRRIRALPGAAAQVPVLMLTAKGDPMDRVIGLEI GADDYLPKPFEPRELLARIRAILRRRESGAQPATQVLRFGSLEIDRDARTVSVHGQPA ELTSYQFDLLVTMAERAGRVLTRDQIMEAVRGRELEAFDRSIDVHMGRIRAAIEADPK NPRRILTVRGVGYVFAKQQD" gene complement(235337..236671) /locus_tag="Dtpsy_0214" /db_xref="GeneID:7383478" CDS complement(235337..236671) /locus_tag="Dtpsy_0214" /note="PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_0199 major facilitator superfamily transporter" /codon_start=1 /inference="protein motif:PFAM:PF07690" /transl_table=11 /product="major facilitator superfamily MFS_1" /protein_id="YP_002551699.1" /db_xref="InterPro:IPR011701" /db_xref="GI:222109435" /db_xref="GeneID:7383478" /translation="MPPDAPASAAARRSWRQAWLVYLEPASLRMLALGFSAGLPLLLV LGTLSFRLREAGIDRTTIGYLSWVGLAYAFKWVWSPLVDRLPLPLLTRWLGRRRSWLL LAQGVVAAGLVGMALADPRQGLDAMVWCALLVAIGSATQDIALDAFRIESADTDHQAA LAATYQTGYRLAMIWAGAGVLWVAARAEDASLSGYQAGAWTTAYLVMAASMLVGVVTV LLSPEPTPRPLPPARNLGEWLHGAVVAPFADFIRRYRWQAALILALIAVYRISDVVMG IMANPFYVDMGYTKDEVAAVTKVFGVVMTLAGAFVGGVLSMRLGVMRVLMLGAVLSAL SNLLFAWLGQRGHDLTGLVLVVSADNLAGGIASAAFIAYLSSLTNVQYSATQYALFSS MMLLLPKWLAGFSGQFVDAQGYSAFFTGTALLGLPVLLLVALASRAQSASSA" gene 236733..237434 /locus_tag="Dtpsy_0215" /db_xref="GeneID:7383479" CDS 236733..237434 /locus_tag="Dtpsy_0215" /note="PFAM: Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ajs:Ajs_0200 AraC family transcriptional regulator" /codon_start=1 /inference="protein motif:PFAM:PF07883" /transl_table=11 /product="transcriptional regulator, AraC family" /protein_id="YP_002551700.1" /db_xref="InterPro:IPR000005" /db_xref="InterPro:IPR013096" /db_xref="GI:222109436" /db_xref="GeneID:7383479" /translation="MARSASALLHPVASVRHYGGEHQAHAHAHAQVLYALQGRMELEV AGRAAFVDTACGMVVPAGTEHGYLARPDTRILVIDVPAQAAVDRVRRFAVPAAARTVP EPGGAAARLALLLQAPRVLARRGLDLAALCAAVDAALHEDWPTARMARLFHLSAARFH ARLLELTGDTPQQWLRARRLDLAERALARGQSLEATALRCGYASASALAYALRRERGL GARALRIQAKTASSA" gene 237533..238438 /locus_tag="Dtpsy_0216" /db_xref="GeneID:7383480" CDS 237533..238438 /locus_tag="Dtpsy_0216" /note="PFAM: protein of unknown function DUF6 transmembrane; KEGG: ajs:Ajs_0201 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF00892" /transl_table=11 /product="protein of unknown function DUF6 transmembrane" /protein_id="YP_002551701.1" /db_xref="InterPro:IPR000620" /db_xref="GI:222109437" /db_xref="GeneID:7383480" /translation="MNTASIRSIAMVLLAAMLWGTTGTAQSLAPAGLSPYWVGALRLV IASAFFALLAWPAWRARRGGGLRWGPVLLAGACVATYNLSFFAGVKSAGVALGTALAI GSGPIWAGLLQTVAQRRLPAPVWWLGTLLGVAGGAAMALDGGSTVRAPWTGIALCLLA GLAYAMYALTNKRLVAQAGAAVVNLAVFGTAGLLSLPVALLLGGAPTVAPGALGIVLY LGLVATGVAYLLFSTALRHISGATGVTLALAEPVTAFALAVAVVGESPSAMAYGGLAA VLAGLLLVIWAELRTTRPAAGAAAA" sig_peptide 237533..237616 /locus_tag="Dtpsy_0216" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.496 at residue 28" gene 238553..238888 /locus_tag="Dtpsy_0217" /db_xref="GeneID:7383481" CDS 238553..238888 /locus_tag="Dtpsy_0217" /note="KEGG: ajs:Ajs_0202 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0202" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551702.1" /db_xref="GI:222109438" /db_xref="GeneID:7383481" /translation="MNHRQRAVAALLGLAAACAQAEVNVSVGIGLPGPIYAEPAPVYV APPPAYVVPRPVYAPRPVMVVPQPVYAPHWRDDDDDHDEWKKWRKRHHKEQKKAYKRW RREWEDNDD" sig_peptide 238553..238618 /locus_tag="Dtpsy_0217" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.992 at residue 22" gene 238913..239848 /locus_tag="Dtpsy_0218" /db_xref="GeneID:7383482" CDS 238913..239848 /locus_tag="Dtpsy_0218" /note="PFAM: peptidase M48 Ste24p; KEGG: ajs:Ajs_0203 peptidase M48, Ste24p" /codon_start=1 /inference="protein motif:PFAM:PF01435" /transl_table=11 /product="peptidase M48 Ste24p" /protein_id="YP_002551703.1" /db_xref="InterPro:IPR001915" /db_xref="GI:222109439" /db_xref="GeneID:7383482" /translation="MALCLPAYMQAVTRAARLLPMNSPTVSVPPLPVDAGCRCCAARG GTWQARRAFVLAAAGTLVLPAAAQVEVGSASGMRRLVPAETLEDSAVQQYSQLLAQAK AKRALAPDNHPQLLKLRAIARQIIPYAAQWNSRAAQWRWEVNLIGSKQINAFCMPGGK IAFYTGILDQLKLTDDEIAMVMGHEMAHALREHARSRVAKSQATSIGLSLGAQLLGLG DLGNAAANLGTQLLTLKFSRSDETDADLVGLELAARAGYNPQAAVSLWRKMGEATGNG GIAFLSTHPSGPDRIRELEQNVPKVQGLYQASRRG" gene complement(239869..240411) /locus_tag="Dtpsy_0219" /db_xref="GeneID:7383483" CDS complement(239869..240411) /locus_tag="Dtpsy_0219" /note="KEGG: neu:NE1984 putative transmembrane protein" /codon_start=1 /inference="ab initio prediction:Prodigal:1.4" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551704.1" /db_xref="GI:222109440" /db_xref="GeneID:7383483" /translation="MSSGPPDLPTLAGGVGTSGALPVQRDTALMAAATVGVCIGCVAG LSLTLAAAKWLPGRVQDMAAWHVGIYYAVFFASVVWAFFRGAARAAAPLLWLAVACTL AIPASSLLGWLAPGAGAWADGALLGVDLTALAGALALAWMARATARRVRSGPRDSVWS APRRRKESESKKLQRLFHKR" gene complement(240494..241132) /locus_tag="Dtpsy_0220" /db_xref="GeneID:7383484" CDS complement(240494..241132) /locus_tag="Dtpsy_0220" /note="PFAM: beta-lactamase domain protein; KEGG: ajs:Ajs_0228 beta-lactamase domain-containing protein" /codon_start=1 /inference="protein motif:PFAM:PF00753" /transl_table=11 /product="beta-lactamase domain protein" /protein_id="YP_002551705.1" /db_xref="InterPro:IPR001279" /db_xref="GI:222109441" /db_xref="GeneID:7383484" /translation="MLHYRTLPVTAFQQNSSIVWCDETMDAAVIDPGGDLDALVAEVQ RLGLQLKAIWLTHAHIDHAGGTGELAERLSLPIIGPHTGDQYWIDALPQQSAMFGFPP ARQFAPTRWLHDGDTVTIGHETLNVRHCPGHTPGHVVFHAPQIGRAFVGDVLFAGSIG RTDFPQGNHQQLIASITQRLWPMGDQTVFIPGHGPESTFGRERRSNPYVGNT" gene complement(241227..241367) /locus_tag="Dtpsy_0221" /pseudo /db_xref="GeneID:7383485" gene complement(241380..242468) /locus_tag="Dtpsy_0222" /db_xref="GeneID:7383486" CDS complement(241380..242468) /locus_tag="Dtpsy_0222" /note="PFAM: transposase IS4 family protein; KEGG: ajs:Ajs_3918 transposase, IS4 family protein" /codon_start=1 /inference="protein motif:PFAM:PF01609" /transl_table=11 /product="transposase IS4 family protein" /protein_id="YP_002551706.1" /db_xref="InterPro:IPR002559" /db_xref="GI:222109442" /db_xref="GeneID:7383486" /translation="MRGNQDFQGAMFSYISLEERVPQAHPLRKLRAVVDALLATMNRE FEAVYARRGRPSVPPEMLLKALLLQILFSIRSERQLVEAINYNLLYRWFVGLNIEDKV WDHSTFSANRERLFNEDLARTFFERVKLSAQWGKLASDEHFSVDGTLIDAWASHKSFK RKDDDSGTPPGRNPEVDFKGQERCNDTHKSTTDADARLFKKSRGDKSRLCHMGHILME NRNGLIVDVEITHASGTAEREAALAMLERRGNRNKRATVGADKGYDSKAFIKGCRKLK VTPHVAAKDKHSAVDARVTRHEGYKTSLKVRKRIEEAFGWIKTVGGLAKTKLIGQAKL TGQALLCFATYNLVRMGSIGGWWNAHHA" gene complement(242660..243361) /locus_tag="Dtpsy_0223" /db_xref="GeneID:7383487" CDS complement(242660..243361) /locus_tag="Dtpsy_0223" /note="PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH; KEGG: ajs:Ajs_0229 GntR family transcriptional regulator" /codon_start=1 /inference="protein motif:PFAM:PF00392" /transl_table=11 /product="transcriptional regulator, GntR family" /protein_id="YP_002551707.1" /db_xref="InterPro:IPR000524" /db_xref="InterPro:IPR011711" /db_xref="GI:222109443" /db_xref="GeneID:7383487" /translation="MTSIAPPLPDSPDTGADAPQSAADAVFHGIVQGLAQQRFVPGQR LVEVDLAAQFGVSRNSVREALQRLAAQGLVDLFRNKGAAIRTLSPQETLEVLDVAERM TGLLARSAARGIAHGAPTAPIQAALAQLHEADRSQDADAFASARRGMYRALLAASGSR ELRRLLPSIHMPIVYAQHRPATLQQVRMRDYQAMCDAVLAGDAAAADAAGMQHVRNVR EAIARRLGAVGLAAD" gene 243483..244673 /locus_tag="Dtpsy_0224" /db_xref="GeneID:7383488" CDS 243483..244673 /locus_tag="Dtpsy_0224" /note="PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ajs:Ajs_0230 acyl-CoA dehydrogenase domain-containing protein" /codon_start=1 /inference="protein motif:PFAM:PF00441" /transl_table=11 /product="acyl-CoA dehydrogenase domain protein" /protein_id="YP_002551708.1" /db_xref="InterPro:IPR006089" /db_xref="InterPro:IPR006090" /db_xref="InterPro:IPR006091" /db_xref="InterPro:IPR006092" /db_xref="InterPro:IPR013107" /db_xref="GI:222109444" /db_xref="GeneID:7383488" /translation="MDFSLSPELRALRDKVRQFIAEQVIPLENDERQSHHGPSEALRD ELVARGKAAGLLTPHASRAMGGMGLTHVEKAVVFEEAGYSWLGPTALNIHAPDEGNIH LMEEVATPAQKERWLRGQVAGDWRSCFAMTEPAPGAGADPSMLDTTAVRDGDDYVING RKWFITGAEGAHYAIVMARMEDGSATMFLTDMGRPGIVLERNMDAMDSCFTGGHGVLR FDNLRVPASDVLGEIGKGFRYAQVRLAPARLTHCMRWLGQARRAHDTALEYARKRQAF GKPLAEHEGVGYMLADNDMDLHTARLHIWHTAWLLDQGEKCNFESSRAKVVCSEAEWR VVDRSVQILGGQGVTGETPVMRIFTDMRAFRIYDGPSEVHRWSMARKLVHMAENAAAA KEVA" gene 244670..245443 /locus_tag="Dtpsy_0225" /db_xref="GeneID:7383489" CDS 244670..245443 /locus_tag="Dtpsy_0225" /note="PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ajs:Ajs_0231 short-chain dehydrogenase/reductase SDR" /codon_start=1 /inference="protein motif:PFAM:PF00106" /transl_table=11 /product="short-chain dehydrogenase/reductase SDR" /protein_id="YP_002551709.1" /db_xref="InterPro:IPR002198" /db_xref="InterPro:IPR002347" /db_xref="InterPro:IPR013968" /db_xref="GI:222109445" /db_xref="GeneID:7383489" /translation="MSDALTPFRLDGRVVLVTGASSGLGQHFARLLASVGARIAVAAR RADKLQGVVDDIAAAGGEARAFTLDVTDAASVRACLDAVGAWGVPDVVINNAGVTVTR PLLEQSEEDFDQVLDTNLKGCWLVATEAARRMVAADKGGAIVNVASILGERVAGGVAP YAISKAGVVQATKAMALELARHRIRVNALLPGYVVTDLNRDFLTSEAGDKLRSRIPSR RFGELTDLDGPLLLLASDAGAAMSGATVAVDGAHLVSSL" gene 245440..246480 /locus_tag="Dtpsy_0226" /db_xref="GeneID:7383490" CDS 245440..246480 /locus_tag="Dtpsy_0226" /note="PFAM: aminoglycoside phosphotransferase; KEGG: ajs:Ajs_0232 aminoglycoside phosphotransferase" /codon_start=1 /inference="protein motif:PFAM:PF01636" /transl_table=11 /product="aminoglycoside phosphotransferase" /protein_id="YP_002551710.1" /db_xref="InterPro:IPR002575" /db_xref="InterPro:IPR008266" /db_xref="GI:222109446" /db_xref="GeneID:7383490" /translation="MSGASTSLPLDALGDYLRAQGLAGTGPLAATVLAGGQSNPTFRI TTAEGRNYVLRKKPPGALIASAHAIDREYRVMRALQDTAVPVPRMLAYCDDAALLGTP FYVMEFLQGRVFMDQSLPGVEPAERTAIYREMNRVIAALHAVDYAAVGLADYGKPGNY VGRQVARWSRQCREATVPVTPAMERLMDWLPQHLPQDDETTLVHGDYRLDNLVFHPNE PRVIGVLDWELSTLGHPLADLAYQCMAWRIPPSLWRGIGGLDLAALGIPPESEYVGWY EQATGRQAAEHWDFYLAYNLFRMAAILHGIAQRAQDGNAAAADAVETGAKAGPLAELG WEAAQRYMAGRK" gene complement(246585..247388) /locus_tag="Dtpsy_0227" /db_xref="GeneID:7383491" CDS complement(246585..247388) /locus_tag="Dtpsy_0227" /EC_number="4.2.99.18" /note="KEGG: ajs:Ajs_0233 exodeoxyribonuclease III Xth; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase" /codon_start=1 /inference="protein motif:TFAM:TIGR00633" /transl_table=11 /product="exodeoxyribonuclease III Xth" /protein_id="YP_002551711.1" /db_xref="InterPro:IPR000097" /db_xref="InterPro:IPR004808" /db_xref="InterPro:IPR005135" /db_xref="GI:222109447" /db_xref="GeneID:7383491" /translation="MFKLTSLNLNGIRSATSKGVEAWIAQSRPDCICVQEIKAQSADM QGRFEELAGLKGYFHFAVKKGYSGVGIYARHEPSDVVIGYGSSEFDTEGRYVELRFDT PARRLSIISAYFPSGSSGEERQLAKFRFLEEFHPHLMRLKAEREFILCGDINIAHQQI DLKNWRSNQKNSGFLPEERAWMTKLLHISDPTGGLVDVYRQLQPEATDACYTWWSNRG QAYANNVGWRLDYHLATPAIAALARTEEIYKAQKFSDHAPITVGYELSL" gene 247399..248109 /locus_tag="Dtpsy_0228" /db_xref="GeneID:7383492" CDS 247399..248109 /locus_tag="Dtpsy_0228" /EC_number="2.4.2.10" /note="KEGG: ajs:Ajs_0234 orotate phosphoribosyltransferase; TIGRFAM: orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase" /codon_start=1 /inference="protein motif:TFAM:TIGR00336" /transl_table=11 /product="orotate phosphoribosyltransferase" /protein_id="YP_002551712.1" /db_xref="InterPro:IPR000836" /db_xref="InterPro:IPR004467" /db_xref="GI:222109448" /db_xref="GeneID:7383492" /translation="MVTDSAQTVEQGASQARLAQDFVRFAVDSGVLRFGEFKTKAGRM SPYFFNAGLFDDGAKLGRLAQFYAQALLASGVEFDMVFGPAYKGIPLAATVAVELARL GKNVPFAYNRKEAKDHGEGGTLVGAPLQGKVLIIDDVMSAGTAARESIALIRAAGATP HAIAIALDRQEKATENGQDVDHSAVQYVRRELGMQVCAIAKLADLLQYLSAGGGDTQM REHHERVLAYRQRYGVND" gene 248142..248858 /locus_tag="Dtpsy_0229" /db_xref="GeneID:7383493" CDS 248142..248858 /locus_tag="Dtpsy_0229" /note="KEGG: ajs:Ajs_0235 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0235" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551713.1" /db_xref="GI:222109449" /db_xref="GeneID:7383493" /translation="MKAGTRHAGWFMAGATAAALGLLSPVAWAQPKPPQEVYTCIDKT GRRITADRPIADCVDREQRILDHTGAERRRIGPTLTEHERAALEVQRRKEAQERARIA EERRRERVLMARYPDEAAHQVEREAALVQVDEVMAVARKRIQELQVERKRIDGEMEFY RRDPLKAPMKLQRQIAENDEAVAEQQRFLTAQDQEKRRIHQRFDAELAQLRQLWAAQR AAASQLVPPQSTLVSPGASR" sig_peptide 248142..248231 /locus_tag="Dtpsy_0229" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 1.000 at residue 30" gene complement(248930..250387) /locus_tag="Dtpsy_0230" /db_xref="GeneID:7383494" CDS complement(248930..250387) /locus_tag="Dtpsy_0230" /note="TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB/Yqey domain protein; GatB region; GatB central domain protein; KEGG: ajs:Ajs_0236 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B" /codon_start=1 /inference="protein motif:TFAM:TIGR00133" /transl_table=11 /product="glutamyl-tRNA(Gln) amidotransferase, B subunit" /protein_id="YP_002551714.1" /db_xref="InterPro:IPR003789" /db_xref="InterPro:IPR004413" /db_xref="InterPro:IPR006075" /db_xref="InterPro:IPR006107" /db_xref="GI:222109450" /db_xref="GeneID:7383494" /translation="MTAKLIQGYEVVIGFETHTQLATRSKIFSRASTAFGAEPNTQAC AVDLALPGTLPVMNREAVACAIKLGLALGSHIAPESIFARKNYFYPDLPKGYQISQFE IPVVQGGEVSFYLGDEKKTVRLVRAHLEEDAGKSLHEDSSLGGGGQSGIDLNRAGTPL LEIVTEPDIRSSEEAVAYAKELHKIVTWIGICDGNMQEGSFRCDANVSVRKPGQPLGT RREIKNLNSFKSMQQAIDYEIRWQIEEIEDGRAIQQATVLFDPDTGETRAMRTKEDAA DYRYFPDPDLPPLRIAAPWIDDIKAQMPELPRAMAARFVQQYGLPEYDATTLTQSQAM AAYFEDAAKGCGQPKLASNWVMGEISRRLNAEEIGVEQAKVDSAQLAALIGRINDGTI SNNAARQVFEALWSGEGHDVDAVIEAKGLKQMNDTGALEKIIDEVIAANAANVEQYKA GKDKAFNALVGQVMKASKGKANPQQVNDLLKAKLV" gene complement(250390..251892) /locus_tag="Dtpsy_0231" /db_xref="GeneID:7383495" CDS complement(250390..251892) /locus_tag="Dtpsy_0231" /note="TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, A subunit; PFAM: Amidase; KEGG: ajs:Ajs_0237 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A" /codon_start=1 /inference="protein motif:TFAM:TIGR00132" /transl_table=11 /product="glutamyl-tRNA(Gln) amidotransferase, A subunit" /protein_id="YP_002551715.1" /db_xref="InterPro:IPR000120" /db_xref="InterPro:IPR004412" /db_xref="GI:222109451" /db_xref="GeneID:7383495" /translation="MSNTPSSELHDLGIAQLTSALRSKQVSAVEAAQHFLARARQHLN LGAYVAMNEDATLAQARAQDAALAAGTAAPLAGVPIAHKDIFVTRDFPSTAGSKMLAG YQSPFDATVVTRLADAGCVTLGKLNCDEFAMGSANENSAVAPVGYDAPAPVRNPWDTS RIPGGSSGGSAVAVSARLAPAVTGTDTGGSIRQPASFCGVTGIKPTYGRASRYGMIAF ASSLDQAGPMARSAEDCALLLSAMCGPDPDRDSTSLDVPAEDFSAKLNDSIDGLRIGI PAEFFGDGLAGDVRAAVDAALKEYEKLGAKLVPISLPRTELSIPVYYIIAPAEASSNL SRFDGVKFGHRAKDYADLVDMYKKTRAEGFGDEVKRRIMIGTYVLSHGYYDAYYLQAQ KIRRMIADDFQNAFKDCDLIAGPVAPSVAWKLGEHGNDPLADYLADIFTLPASLAGLP GMSVPAGFGAGGMPVGLQLIGNYFQEGRLLNAAHRLQQATDFHLRAPEGI" gene complement(251903..252202) /locus_tag="Dtpsy_0232" /db_xref="GeneID:7383496" CDS complement(251903..252202) /locus_tag="Dtpsy_0232" /note="TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; KEGG: ajs:Ajs_0238 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C" /codon_start=1 /inference="protein motif:TFAM:TIGR00135" /transl_table=11 /product="glutamyl-tRNA(Gln) amidotransferase, C subunit" /protein_id="YP_002551716.1" /db_xref="InterPro:IPR003837" /db_xref="GI:222109452" /db_xref="GeneID:7383496" /translation="MALTPQDIGRIANLARLELSPGESERMLTQLNGFFGIVEKMQAV DTHGIAPLSHPVAVVRDVQLRLREDVASEPDQREANQRSAPAVERGLFLVPKVIE" gene 252408..253451 /locus_tag="Dtpsy_0233" /db_xref="GeneID:7383497" CDS 252408..253451 /locus_tag="Dtpsy_0233" /note="TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl; KEGG: ajs:Ajs_0239 rod shape-determining protein MreB" /codon_start=1 /inference="protein motif:TFAM:TIGR00904" /transl_table=11 /product="cell shape determining protein, MreB/Mrl family" /protein_id="YP_002551717.1" /db_xref="InterPro:IPR001023" /db_xref="InterPro:IPR004753" /db_xref="GI:222109453" /db_xref="GeneID:7383497" /translation="MFGAFRRYFSTDLAIDLGTANTLIFARDKGIVLDEPSVVAIRHE GGPHGKKVIQAVGHEAKAMLGKVPGNIEAIRPMKDGVIADFVITEQMIKQFIKMVHPR SVLTPSPRIIICVPCGSTQVERRAIKDAAEAAGATAVYLIEEPMAAGIGAGLPVSEAS GSMVVDIGGGTTEVGVISLGGMVYKGSVRVGGDKFDESIINYIRRNYGMLIGEPTAEA IKKNIGSAFPGSEVKEMEVKGRNLSEGVPRSFTISSNEVLEALTEPLNQIVSAVKNAL EQTPPELGADIAERGMMLTGGGALLRDLDRLLAEETGLPVLVAEEPLTCVVRGCGIAL ERMDRQGSIFTSD" gene 253481..254398 /locus_tag="Dtpsy_0234" /db_xref="GeneID:7383498" CDS 253481..254398 /locus_tag="Dtpsy_0234" /note="TIGRFAM: rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC; KEGG: ajs:Ajs_0240 rod shape-determining protein MreC" /codon_start=1 /inference="protein motif:TFAM:TIGR00219" /transl_table=11 /product="rod shape-determining protein MreC" /protein_id="YP_002551718.1" /db_xref="InterPro:IPR005223" /db_xref="InterPro:IPR007221" /db_xref="GI:222109454" /db_xref="GeneID:7383498" /translation="MPLGTLDRSAPTLFKQGPSPLSRLTLYSALALFLMVADARFHLT EPLRKAVSTALYPLQWLMLQPVEFADKGAGYFQSLQAAQQGMDDAQRTMAQMSVRAGE AEQLLRENAELRQLLALRERLTTEATAAQVIYDTADPYTRRVMVDRGQLAGVEPGSPV MDASGVLGQVTRVFPMLSEVTLLIDRDQAIPVLNLRTGARSVAYGDPVAGHGGGMELR FTPGNADVQEGDLLTTSGVDGLYPAGLPVARVLRVERRADSAFARIYCAPVAQMYGAR HVMVLKPVVADLPPRPEPAPAAPKRGGRK" gene 254395..254916 /locus_tag="Dtpsy_0235" /db_xref="GeneID:7383499" CDS 254395..254916 /locus_tag="Dtpsy_0235" /note="TIGRFAM: rod shape-determining protein MreD; KEGG: ajs:Ajs_0241 putative rod shape-determining MreD transmembrane protein" /codon_start=1 /inference="protein motif:TFAM:TIGR03426" /transl_table=11 /product="rod shape-determining protein MreD" /protein_id="YP_002551719.1" /db_xref="InterPro:IPR007227" /db_xref="GI:222109455" /db_xref="GeneID:7383499" /translation="MIMPKGQQLLLPVNPVFIAASLVAALALNMLPLGRVVWTPDWVM VLLVFWGMHQPQRVGLGVAFLMGLCLDVYQSALLGQHALVYCLLMFGAQYTHRRLLWF GPLLQALQLLPLFFAAHALELLLRVAIGGGILPGFEGLVAPLLEATLWPLASWVLLAP QRRPPDRDENRPL" gene 254944..256884 /locus_tag="Dtpsy_0236" /db_xref="GeneID:7383500" CDS 254944..256884 /locus_tag="Dtpsy_0236" /EC_number="2.4.1.129" /note="KEGG: ajs:Ajs_0242 peptidoglycan glycosyltransferase; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain" /codon_start=1 /inference="protein motif:TFAM:TIGR03423" /transl_table=11 /product="penicillin-binding protein 2" /protein_id="YP_002551720.1" /db_xref="InterPro:IPR001460" /db_xref="InterPro:IPR005311" /db_xref="InterPro:IPR017790" /db_xref="GI:222109456" /db_xref="GeneID:7383500" /translation="MTELRNAEADVWHFRLRVFVVGVVVLLAFLLIVARLVVLQVVRH EDLADQAESNRTAVVPIVPNRGLILDRNGVVLATNYSAYTLEITPSRTMDLEATIDAL AEVVDIQPRDRRRFKRLREESRSFDSLPIRTRLSDEEVARFAAQRYRFPGVDIKARLF RNYPLGEVASHAIGYIGRINQREKERIEDSDDAANYRGTDYIGKLGVEQSFESTLHGQ TGFERMETSAGGHAVRRLNSHPATPGNTVMLSLDIKLQKLIEDMFGERRGALVALDPR NGEVLALVSKPTFDPNLFVEGIDQENWQALNESINKPLLNRALRGTYPPGSTYKPFMA LAALELGKRTAGQVFNDPGYYNYGGRTFRSHEGGLGGVDMHRAIQYSSNTYFYSLAVE MGVDAIHDFMKPLGFGQITGIDLGGEVRGVLPSTEWKRNTYKRPEAKRWYSGETVSLG IGQGYNNFTMLQLAVAEATLANGGTRHRPHLIKAVKDQVGGQVTEVQQPPGERLGYNP KHVAIVNNALMAVNQAGTGRRVFAGAPYTSAGKTGTAQAVSLGQNVRYNAKLLEEHQR DHSLFAAFAPVEEPRIAVAVIVENAGFGAAAAAPIVRRVFDYWLLGQYPSEQDLAAVS KGQAGAPMGTPRNVADVPLAMP" gene complement(256901..257800) /locus_tag="Dtpsy_0237" /db_xref="GeneID:7383501" CDS complement(256901..257800) /locus_tag="Dtpsy_0237" /note="PFAM: protein of unknown function DUF6 transmembrane; KEGG: ajs:Ajs_0243 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF00892" /transl_table=11 /product="protein of unknown function DUF6 transmembrane" /protein_id="YP_002551721.1" /db_xref="InterPro:IPR000620" /db_xref="GI:222109457" /db_xref="GeneID:7383501" /translation="MRSERQGLLALLLVVAVWGTTFPAMKMMSAHLDALQIIWARFAI ALLVLAPLWRGLRRTELRWGLLLGALLFLAFWLQIEGLARTSSNRNAFVTGLNVLVVP LLAMAVLGRRYGAALWAACAMALAGMVLMFHENEPWNLGDTLTLASTLFYAIYILTLE ECARRTAARPLRATRMAAVQALVMFAAASVLLLARHGEVATTLQALADLPAHALTALA YLGVVASVLVVTLQAWGQQRVDAMRSAIVFGLEPVFAAATAWLLIGERLGAAGLAGAA LIVCALVVSQLPPPRALARPSAP" sig_peptide complement(257720..257800) /locus_tag="Dtpsy_0237" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.975) with cleavage site probability 0.684 at residue 27" gene complement(257933..258685) /locus_tag="Dtpsy_0238" /db_xref="GeneID:7383502" CDS complement(257933..258685) /locus_tag="Dtpsy_0238" /note="PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_0244 ABC transporter related" /codon_start=1 /inference="protein motif:PFAM:PF00005" /transl_table=11 /product="ABC transporter related" /protein_id="YP_002551722.1" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR017871" /db_xref="GI:222109458" /db_xref="GeneID:7383502" /translation="MSHAASANPYIVCKDVRKAFGSHEVLKGVSTVFRTGEVTVIIGA SGSGKSTLLRAINRLEPHDSGSITIDGVEVTDDPRTLQLQRSEVGMVFQQFNLFGHMT VLDNVTLAPRRIRHTSRREANDKAMALLKRVGMQDHAHKYPWQLSGGQQQRVAIARAL AMAPKVMLFDEPTSALDPEMVQEVLDVMRELARGGMTMIVVTHEMGFAREVADRVMFF DQGCIAHDAPPAEFFSNPANDRIRSFIGRMSH" gene complement(258682..259464) /locus_tag="Dtpsy_0239" /db_xref="GeneID:7383823" CDS complement(258682..259464) /locus_tag="Dtpsy_0239" /note="TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_0245 polar amino acid ABC transporter, inner membrane subunit" /codon_start=1 /inference="protein motif:TFAM:TIGR01726" /transl_table=11 /product="polar amino acid ABC transporter, inner membrane subunit" /protein_id="YP_002551723.1" /db_xref="InterPro:IPR000515" /db_xref="InterPro:IPR010065" /db_xref="GI:222109459" /db_xref="GeneID:7383823" /translation="MLLALWPAHWSRTQRSNATLVAALVLMALVLALLGQFLSFFPEP IGSNAELFSEGALTTLYLTLVSGTVGLLLGTAAALARTSRLAWLRWVASFYIWAIRGT PLLVQILFVYFALPVLVPGLNLPDFAAAVVALGLNVGAYNAEAIRAGLLAVPRGQTEA ARALGLSRTHVFFDVVFPQAFKIALPPLVSNFVALLKDSSLAYAIGVVELTNVGNRIQ SATFQPVATLTTVAITYLILTTLVTQVTHAIEYRFDVEGRVK" sig_peptide complement(259366..259464) /locus_tag="Dtpsy_0239" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.975) with cleavage site probability 0.625 at residue 33" gene complement(259504..260265) /locus_tag="Dtpsy_0240" /db_xref="GeneID:7383824" CDS complement(259504..260265) /locus_tag="Dtpsy_0240" /note="PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: ajs:Ajs_0246 extracellular solute-binding protein" /codon_start=1 /inference="protein motif:PFAM:PF00497" /transl_table=11 /product="extracellular solute-binding protein family 3" /protein_id="YP_002551724.1" /db_xref="InterPro:IPR001638" /db_xref="GI:222109460" /db_xref="GeneID:7383824" /translation="MKMFKTLATAVALCAAVVVQARPLEEIQKSGTIILGSEGQYAPF NFFKGKQLTGYEIEVAEAVVKKMGLKYEWKTVGFDALLTGLAQDRWDLVIASHAITDE RSKAVTFTLPHYCSGGIIVSMKPEVAKAADLNGKVVAVQTGTTYLDAVKKVPGVKDVK NFPTDEAARNALASKRVDAWVTDRFVAKEMLAKAPKAGFRTGDMLFVEQVASAVSKGN QGLADAWNKALKEAIADGTVGKISQKYFQEDVTCK" sig_peptide complement(260200..260265) /locus_tag="Dtpsy_0240" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.997 at residue 22" gene complement(260431..261351) /locus_tag="Dtpsy_0241" /db_xref="GeneID:7383825" CDS complement(260431..261351) /locus_tag="Dtpsy_0241" /note="TIGRFAM: arginase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: ajs:Ajs_0247 arginase" /codon_start=1 /inference="protein motif:TFAM:TIGR01229" /transl_table=11 /product="arginase" /protein_id="YP_002551725.1" /db_xref="InterPro:IPR005924" /db_xref="InterPro:IPR006035" /db_xref="InterPro:IPR014033" /db_xref="GI:222109461" /db_xref="GeneID:7383825" /translation="MTTLTLIGAPTDVGASVLGASMGPDALRIAGIARAMQARGFDVR DQGNLAGPGNPQAEPASGFRHLAEVAAWNRAVYEATHAALQAGQLPLLMGGDHCLAIG SISAVAQHCRARGRRLKVLWFDAHADANTPESSPSGNLHGMPVACLLGHGPAQLTRLA GPDAPPALQSGQITLIGVRSVDATEKRFVNEHGIEVYDMRTIDELGMRAVMQAALADV DQDTHLHVSFDMDCLDPSVAPGVGTGVRGGPTYRETQLCMEMLADCGALGSADLVELN PALDVRNQTAELAVDLLESLFGKSTLMRPQ" gene complement(261389..262147) /locus_tag="Dtpsy_0242" /db_xref="GeneID:7383826" CDS complement(261389..262147) /locus_tag="Dtpsy_0242" /note="PFAM: protein of unknown function DUF81; KEGG: ajs:Ajs_0248 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF01925" /transl_table=11 /product="protein of unknown function DUF81" /protein_id="YP_002551726.1" /db_xref="InterPro:IPR002781" /db_xref="GI:222109462" /db_xref="GeneID:7383826" /translation="MEWIIVSLASLLAGFVDAIVGGGGLILLPALFATFPTAPPATLM GTNKSAAIWGTGIATWQYSRRVQMRWRAMLPAALAGFVGAFAGAWVVTLISADFLRKL LPLVLVALLIYTLARKDLGRHHAPRLAAGRETLAACAIGVTIGFYDGFFGPGTGSFFV FLFVRVLGYDFLNASVSAKLLNLATNVAALILFTAKGHVWWHFALPLAVANVVGSLLG AHLALKHGAGFVRGIFILVVGMLILKTGYDAFLR" gene complement(262447..264141) /locus_tag="Dtpsy_0243" /db_xref="GeneID:7383827" CDS complement(262447..264141) /locus_tag="Dtpsy_0243" /note="PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: ajs:Ajs_0249 glucose-methanol-choline oxidoreductase" /codon_start=1 /inference="protein motif:PFAM:PF00732" /transl_table=11 /product="glucose-methanol-choline oxidoreductase" /protein_id="YP_002551727.1" /db_xref="InterPro:IPR000172" /db_xref="InterPro:IPR007867" /db_xref="GI:222109463" /db_xref="GeneID:7383827" /translation="MSDTTFDYIIIGGGTAGALLANRLSADPKNRVLLVEAGRRDDYH WIHIPVGYLYCIGNPRTDWLYHTEADTGLNGRSLRYPRGKVLGGCSSINGMIYMRGQA RDYDQWAQITGDDAWRWDSVLPAFRRHEDHWRLDQPEGVNENFKRLHGSKSTGSSGEW RVEKQRLRWDILDAFAQAAQQAGIPATDDFNRGTNEGVGYFEVNQKNGWRWNTAKAFL RPTCYGRPNFEMWTSAQVTRLILDRQPDGSLRCTGVQVWTGEEMVTAHAQQEVILSAG AVNSPQILQLSGIGPGALLQRHGIDIQADLPGVGANLQDHLQIRAVYKVQGVPTLNML AGNLLGKARIGLEYAFKRSGPMSMAPSQLGAFTRSQPDLPHPNLEYHVQPLSLEAFGE PLHRFPAFTASVCNLNPTSRGTIQIKSPDFRTAPAIAPNYLSTPEDRQVAADSLRVTR RIVAQPALAPYQPEEYKPGPQYQSDEDLARLAGDIATTIFHPVGTTRMGRLDDPQAVL DARLRVRDGRGGVVAGLRVVDAGAMPTITSGNTNAPTLMMAEMAAQWIRSEARAPV" gene 264477..265595 /locus_tag="Dtpsy_0244" /db_xref="GeneID:7383828" CDS 264477..265595 /locus_tag="Dtpsy_0244" /note="PFAM: protein of unknown function DUF140; KEGG: ajs:Ajs_0250 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF02405" /transl_table=11 /product="protein of unknown function DUF140" /protein_id="YP_002551728.1" /db_xref="InterPro:IPR003453" /db_xref="InterPro:IPR017441" /db_xref="GI:222109464" /db_xref="GeneID:7383828" /translation="MPVTHPPSVVQDHAARPLAQPQGEWVAAAFADRRAWRRVAAQLK DCGPGVAWSLQGVQRLDHVGAQILWNHWGRAWPEQLELTENQREMLERVAQYTTPCEP PAPWRLGDQVDRLGVLVLHALDHVRHLVILVGQLVLDVLRLLRNPRRGPWRDISGHLY RMGATALPITALVGFLIGVVLAYLMSLQLRQFGAEAFIVNILGISLIRELGPMLGAIL VAGRSGSAITAQIGVMRVTEELDAMRVMGIPHGFRLVMPRALALALAMPLVALWTTLA ALAGGMLAADLTMGISSAYFAQALPAAVNVSNLWLAMSKSVVFGVFIALIGCHWGLRV KPNTQSLGEGTTASVVSAITMVIIVDALFAVAFKNVGF" gene 265598..266440 /locus_tag="Dtpsy_0245" /db_xref="GeneID:7383829" CDS 265598..266440 /locus_tag="Dtpsy_0245" /note="PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_0251 ABC transporter related" /codon_start=1 /inference="protein motif:PFAM:PF00005" /transl_table=11 /product="ABC transporter related" /protein_id="YP_002551729.1" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR017871" /db_xref="GI:222109465" /db_xref="GeneID:7383829" /translation="MDATRPAADADTRAVVEPPVVDIRGLATVFGRGDEAFTVHDDLQ LTVQRGEILSLVGGSGTGKTVLLRHILGLTRPTRGSVEVLGRSAAELVGGERASSRVG MLFQHGALFSAFNVLDNIAFALRELGTLPPALVNDAAMVKLRLAGLKPEHATRMPADL SGGMIKRVALARALIMDPPLLLLDEPTAGLDPSSSDEFCALLRELHAALGLTVIMVTH DLDTLYALSTRVAVLADRRVIVTGTPQEVARFDHPFIHHFFLGERGRRAMAQPPAASS SKEA" gene 266440..267417 /locus_tag="Dtpsy_0246" /db_xref="GeneID:7383830" CDS 266440..267417 /locus_tag="Dtpsy_0246" /note="PFAM: Mammalian cell entry related domain protein; KEGG: ajs:Ajs_0252 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF02470" /transl_table=11 /product="Mammalian cell entry related domain protein" /protein_id="YP_002551730.1" /db_xref="InterPro:IPR003399" /db_xref="GI:222109466" /db_xref="GeneID:7383830" /translation="MENKSHALAAGIFVIAVAALLAGLGMWLTRDQTDYQLYELSSKD SVSGLQPQAAVRYKGVAVGKVTHIGFDPQVAGNVLIRIAVNADAPISPTTFATLGYQG VTGLAHVQLDDAEAPLPAPPPGASGLPRLPLHSSSFSQLAEQGPAILGQVQEATQRIN TLLGDENQQRFSTALKQLGDAAGSIDQLARRLDNTVTTRLDPALAGVPPLVQDTQQTL QALRQAGSSAATAANDVSQAIRTLQAEGGALDEIAAGAKSLAGAADRFGRVTLPRINH AADETARAARRLGRTASGINDNPQSLIYGPGRSAAGPGEPGFTAPAAQP" sig_peptide 266440..266508 /locus_tag="Dtpsy_0246" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.980) with cleavage site probability 0.500 at residue 23" gene 267438..268112 /locus_tag="Dtpsy_0247" /db_xref="GeneID:7383831" CDS 267438..268112 /locus_tag="Dtpsy_0247" /note="PFAM: protein of unknown function DUF330; KEGG: ajs:Ajs_0253 putative lipoprotein" /codon_start=1 /inference="protein motif:PFAM:PF03886" /transl_table=11 /product="protein of unknown function DUF330" /protein_id="YP_002551731.1" /db_xref="InterPro:IPR005586" /db_xref="GI:222109467" /db_xref="GeneID:7383831" /translation="MTIKMIAVGAHQISVKAIFGFTFMALMAGCSILPEPPVRADVYD FGPGPLQAPGPAASAPLPPIALAEVTATGLPEGSTALLYRLAYTNAQQLRPYTQARWS LPPAVLLHQAVRERLGQRRAVLSGDDGMAVLLERGRMPSVLRLELEEFSHVFGAPQAS AGLVRVRAVLADASTAGETLVTQRVFVARRDAATPDAAGGAKALADAAAQVAEELAAW VEQSGR" gene 268088..268273 /locus_tag="Dtpsy_0248" /db_xref="GeneID:7383832" CDS 268088..268273 /locus_tag="Dtpsy_0248" /codon_start=1 /inference="ab initio prediction:Prodigal:1.4" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551732.1" /db_xref="GI:222109468" /db_xref="GeneID:7383832" /translation="MGGAVRPLSACAFPTPRDMLRMSLFFCPPRTGDGAEAYMPLSPW ADAACVRAPTRCRRAPA" gene 268358..268573 /locus_tag="Dtpsy_0249" /db_xref="GeneID:7383833" CDS 268358..268573 /locus_tag="Dtpsy_0249" /note="PFAM: CsbD family protein; KEGG: ajs:Ajs_0254 CsbD family protein" /codon_start=1 /inference="protein motif:PFAM:PF05532" /transl_table=11 /product="CsbD family protein" /protein_id="YP_002551733.1" /db_xref="InterPro:IPR008462" /db_xref="GI:222109469" /db_xref="GeneID:7383833" /translation="MNEDRIEGNWKQFKGKVKEQWGKLTDDDLDVIAGKRDQLLGKLQ ERHGLAREAAEEQLKGWEQRNPDFRYD" gene 268650..269228 /locus_tag="Dtpsy_0250" /db_xref="GeneID:7383834" CDS 268650..269228 /locus_tag="Dtpsy_0250" /note="KEGG: ajs:Ajs_0255 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0255" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551734.1" /db_xref="GI:222109470" /db_xref="GeneID:7383834" /translation="MKNARNLLALAAAALMATSGMAMTKEEYNAGKDRIGADYKAAKA QCDTLQGNAKDVCMKEAKGREKVAKAELEAQYKPSDKATYNVNEARADADYEVAKEKC DDQKGDAKDICVKDAKAAHVAAKENAKVQRAQAKPADSTAEKRADVAEAKKDAAEAQR EANYKAAKERCDTMSGDAKDKCVADAKRTHGQ" sig_peptide 268650..268724 /locus_tag="Dtpsy_0250" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.666 at residue 25" gene 269376..269882 /locus_tag="Dtpsy_0251" /db_xref="GeneID:7383835" CDS 269376..269882 /locus_tag="Dtpsy_0251" /note="TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: ajs:Ajs_0256 hemerythrin-like metal-binding protein" /codon_start=1 /inference="protein motif:TFAM:TIGR02481" /transl_table=11 /product="hemerythrin-like metal-binding protein" /protein_id="YP_002551735.1" /db_xref="InterPro:IPR012312" /db_xref="InterPro:IPR012827" /db_xref="GI:222109471" /db_xref="GeneID:7383835" /translation="MAALQWSEELALDLPQMDHTHQEFVALLQAVESADDAALIGAWE DLVAHTDAHFAQEDRWMQATRFAAGNCHSTQHQVVLKIMREGTDRARQGELHVLREMA AELAVWFPQHTDAMDASLAQHLRRVGFDPATGSVQKPGALPDDLIHGCGGACSSGDDT SAQPAAVA" gene 270065..270997 /locus_tag="Dtpsy_0252" /db_xref="GeneID:7383836" CDS 270065..270997 /locus_tag="Dtpsy_0252" /note="KEGG: ajs:Ajs_0257 diguanylate cyclase with PAS/PAC sensor; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; SMART: PAS domain containing protein; GGDEF domain containing protein; PAC repeat-containing protein" /codon_start=1 /inference="protein motif:TFAM:TIGR00254" /transl_table=11 /product="diguanylate cyclase with PAS/PAC sensor" /protein_id="YP_002551736.1" /db_xref="InterPro:IPR000014" /db_xref="InterPro:IPR000160" /db_xref="InterPro:IPR000700" /db_xref="InterPro:IPR001610" /db_xref="InterPro:IPR013655" /db_xref="GI:222109472" /db_xref="GeneID:7383836" /translation="MTPHEPPESALYRTLLESTRAIPWKIDWATATFAYIGPQIEDLL GWAPTSWRTVQDWADRMHPDDRDRVVNFCISQSQSGVDHEADYRALTTGGDYVWIRDV VHVVRDLQGNVVSLVGFMFDITERKQNEHQLLQLQQELQELSFRDGLTGVNNRRKFDA VYEREWQEAQRTGEPLSLLMFDVDFFKSYNDQYGHVEGDECLRRVARALQQAAHRPRD CLARYGGEEFVLLLPGADASSARAVAQRCMQEVAHAGIVHAASPLGQQLTVSVGMGTA LPGTQDDSKRFLETVDRCLYRAKHAGRNRIEATA" gene complement(271001..271639) /locus_tag="Dtpsy_0253" /db_xref="GeneID:7383837" CDS complement(271001..271639) /locus_tag="Dtpsy_0253" /note="PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: ajs:Ajs_0258 multiple antibiotic resistance (MarC)-related proteins" /codon_start=1 /inference="protein motif:PFAM:PF01914" /transl_table=11 /product="multiple antibiotic resistance (MarC)-related protein" /protein_id="YP_002551737.1" /db_xref="InterPro:IPR002771" /db_xref="GI:222109473" /db_xref="GeneID:7383837" /translation="MDLKPLITLLAIVNPLAIVPFFIHYTSGFNAAQRRRTVQVAAFS AFCVIAACALVGLQILDFFNISLQSFQVGGGMLLLISAMNMLNAQPAEAKPHTHELEQ GAEKAAAGSSIAVVPLTIPLLTGPAAMSTVVIYADRAQSIWQHLALVGYGVVVGAATA LCFALAEPIERVLGKTGINVMTRLMGLILAALAVEVMADGLSKLFPVLAARS" gene complement(271639..272385) /locus_tag="Dtpsy_0254" /db_xref="GeneID:7383838" CDS complement(271639..272385) /locus_tag="Dtpsy_0254" /note="PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ajs:Ajs_0259 short-chain dehydrogenase/reductase SDR" /codon_start=1 /inference="protein motif:PFAM:PF00106" /transl_table=11 /product="short-chain dehydrogenase/reductase SDR" /protein_id="YP_002551738.1" /db_xref="InterPro:IPR002198" /db_xref="InterPro:IPR002347" /db_xref="InterPro:IPR013968" /db_xref="GI:222109474" /db_xref="GeneID:7383838" /translation="MDKIVLITGGSRGIGAAAALLAAQRGWAVAINYLRHAEAANGVV RQIEAAGGRAIAVQADVAVEADVVTLFETVDHRLGRLTALVNNAGVVDRPARVDEMHG ERLRRMFSINVLGAFYCVREAVLRMSTRHGGAGGSIVNVSSIAARLGAPHQYVDYAAS KGALDTLTIGLAHEVGGEGIRVNAVRPGLIDTDIHASGGLPHRVRDLAGQVPMGRGGT PEEVAEAIVWLMSDAASYTSATLMDIAGGR" sig_peptide complement(272317..272385) /locus_tag="Dtpsy_0254" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.771) with cleavage site probability 0.370 at residue 23" gene 272493..273182 /locus_tag="Dtpsy_0255" /db_xref="GeneID:7383839" CDS 272493..273182 /locus_tag="Dtpsy_0255" /EC_number="3.1.1.45" /note="PFAM: dienelactone hydrolase; KEGG: ajs:Ajs_0260 carboxymethylenebutenolidase" /codon_start=1 /inference="protein motif:PRIAM:3.1.1.45" /transl_table=11 /product="Carboxymethylenebutenolidase" /protein_id="YP_002551739.1" /db_xref="InterPro:IPR002925" /db_xref="GI:222109475" /db_xref="GeneID:7383839" /translation="MGQWVDLTASDGFTAPAWVARTDGAPRGAVVVLQEIFGVNAHIR AVTDRLAMRGYLAVAPSTFARVQKGVDLGYSDADMKAGRALKAAVEGLPAPGVMPDIQ AAIDYAARHSDCKVGVVGFCWGGLLTWRAACMLQGLSAAVPYYGGGMTTPAEVARQPR VPVLAHFGERDQWIPLDSVQAFARAHPEAQVHVYAADHGFNCDQRASYDEAAAMTARD RTLAFLARHVG" gene complement(273270..274838) /locus_tag="Dtpsy_0256" /db_xref="GeneID:7383840" CDS complement(273270..274838) /locus_tag="Dtpsy_0256" /note="TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_0261 EmrB/QacA family drug resistance transporter" /codon_start=1 /inference="protein motif:TFAM:TIGR00711" /transl_table=11 /product="drug resistance transporter, EmrB/QacA subfamily" /protein_id="YP_002551740.1" /db_xref="InterPro:IPR004638" /db_xref="InterPro:IPR007114" /db_xref="InterPro:IPR011701" /db_xref="GI:222109476" /db_xref="GeneID:7383840" /translation="MTAPAHTPPLPPPPLTGSARLWGTLALSAATFMNVLDTSIANVS LPAIAGDLGVSPTQGTWVITSFAVANAIAVPLTGWLSQRFGQVRLFVASVALFVIASL LCGLAPNMTLLIAARALQGFVAGPMIPLSQSLLLSSYPRALAGLAMAMWSMTTLIAPV MGPLLGGWITDNMTWPWIFYINVPVGIAAVMVTWGIFHQRETEQRALPIDSIGLALLV IWVGAMQVMLDIGKEHDWFESPWVVACGLVALVGLVAFVVWERGEDHPVVDLALFRIR NFWAGALATSVGYGLFFGNVVLLPLWLQQYMGYTATQAGEVMAPVGLLAMVLSPLVGK NIAKVDPRRFATLAFLVFALVLWMRSNFNTQADLATIMVPTIIQGVAMAFFFIPLVTI TLSGIAPDRIPAASGLSNFMRITAGAVGTSVTTTLWERRASLHHAQLTEGLHQGHLPF TQALQGLQAGGLTPEQALAQVERLVNQQAFMLAANDIFYASALLFLLLIPLVWLAHPT RAASGSADAAAGAH" gene complement(274849..276057) /locus_tag="Dtpsy_0257" /db_xref="GeneID:7383841" CDS complement(274849..276057) /locus_tag="Dtpsy_0257" /note="PFAM: secretion protein HlyD family protein; KEGG: ajs:Ajs_0262 secretion protein HlyD family protein" /codon_start=1 /inference="protein motif:PFAM:PF00529" /transl_table=11 /product="secretion protein HlyD family protein" /protein_id="YP_002551741.1" /db_xref="InterPro:IPR006143" /db_xref="GI:222109477" /db_xref="GeneID:7383841" /translation="MTATPSTPSTASKASRRKALFTLAGVVVLAGCAWGLYDWLVASH YEHTDNAYVQGNVIQITPQTGGTVMSILADDTDFVRAGAALVQLDPADARVALQQAEA NLAQAVRQTRTLYANNSALAAQVRLREAEAARAQAEIARAEDDLRRRQALTGEGAVSQ EELRHAQSQLQTARTQLAAAQAGVAAAREQLVSNQSLTQGVAVAQHPSVQAAAAKVRE AYLADRRTALPAPVDGYVARRTVQLGQRVAAGTPLMTIVPLREVWVDANFKENQLRNL RLGQRATLVADLYGKKVEYTGTVAGLGVGTGAAFALLPAQNATGNWIKVVQRVPVRIA LDAGQLAEHPLRVGLSMNVSVDTQDRSGPALADAPRKEAVASTAVYDALDKGADADVA RIIRANLGTL" sig_peptide complement(275950..276057) /locus_tag="Dtpsy_0257" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.906) with cleavage site probability 0.624 at residue 36" gene complement(276096..277649) /locus_tag="Dtpsy_0258" /db_xref="GeneID:7383842" CDS complement(276096..277649) /locus_tag="Dtpsy_0258" /note="TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: ajs:Ajs_0263 RND efflux system outer membrane lipoprotein" /codon_start=1 /inference="protein motif:TFAM:TIGR01845" /transl_table=11 /product="RND efflux system, outer membrane lipoprotein, NodT family" /protein_id="YP_002551742.1" /db_xref="InterPro:IPR003423" /db_xref="InterPro:IPR005829" /db_xref="InterPro:IPR010131" /db_xref="GI:222109478" /db_xref="GeneID:7383842" /translation="MKNHLSPSSAPALIPATAPRGSALLYGATLAVALLALPLLSGCA DMAGIDSHARMRDPASLGLAAAPSSSADSAVQPQTAVSADWWRSFGDAQLDALITQAL QGNPGLQQAAARIARAEAFADTARAAQSPQVNGSLDATRQRYSANGPYPPGQAGAVRS VETARLSGSWELDFFGKHRAALAAALGEAQAARADAEAARLLLASRVAQGYFQLARLQ AQRAVAERTLQQRTEMLQLVQRRVQAGLDTQLELRQSEGALPEARQQIEALREQEALA RNALGALIADPQTAQTLTPQALAAIHFSETPAAVPADLLGRRPDVAAARWRVEAATQD MGVARAQFYPNVSLTAFVGLASVGLDRFIEAGSREWGVGPALRLPIFDAGRLRANLRG KAADRDAAVESYNAALLEAVRDAADQLASSSSIARQIAEQHQAGESAQAAYGIARRRY EAGLGTYLQVLSAESQVLAQRRLAVDLAARRLDNQVGVMRALGGGYAATPPPTAQAPQ AAPTVAAAR" sig_peptide complement(277566..277649) /locus_tag="Dtpsy_0258" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.809) with cleavage site probability 0.230 at residue 28" gene complement(277708..278223) /locus_tag="Dtpsy_0259" /db_xref="GeneID:7383843" CDS complement(277708..278223) /locus_tag="Dtpsy_0259" /note="PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: ajs:Ajs_0264 MarR family transcriptional regulator" /codon_start=1 /inference="protein motif:PFAM:PF01047" /transl_table=11 /product="transcriptional regulator, MarR family" /protein_id="YP_002551743.1" /db_xref="InterPro:IPR000835" /db_xref="GI:222109479" /db_xref="GeneID:7383843" /translation="MNLPSVPPPLSADAACPLSDPELPVPFEIERSIGFQMRRITTLL GYEVERRMEPLGLTDAQWKPLLRLLLDPPGTAAALARMCHLDAGGLTRLLDRLEAKGL CQRERSQEDRRVVHVALTSEGQAVAAQLPALLGEVQDQLLQGFSAEEEAQLRDFLKRI YANVRPPEGGP" gene complement(278328..279533) /locus_tag="Dtpsy_0260" /db_xref="GeneID:7383844" CDS complement(278328..279533) /locus_tag="Dtpsy_0260" /note="PFAM: Mg2 transporter protein CorA family protein; KEGG: ajs:Ajs_0265 Mg2+ transporter protein, CorA family protein" /codon_start=1 /inference="protein motif:PFAM:PF01544" /transl_table=11 /product="Mg2 transporter protein CorA family protein" /protein_id="YP_002551744.1" /db_xref="InterPro:IPR002523" /db_xref="GI:222109480" /db_xref="GeneID:7383844" /translation="MTLTPQAIRIFHLQPGAQARELPELPTQPPARGFYWIACTRAAF STELPRLQGVLQALTGQQLVDLHVSDLLNAQLPSHYDYTSQYDMLVVRRLSASLAPAA APLMPAAARGGPPVLRRIDTSPVGFAVFDQVLLSVHPADCSVRDAYAARLITPPAPTT TPPPEAPKDSAPPTTPAEAVVRELRTGPVAGTRLPASPADLMLRMVNQIVDNYLDLRR ELSRQLDHWQAELLQPRTRFNNWRALMDARLTLHQLDEICEDQRAAVQAWCAVLETWA PSSDTPAALRELDLLKVRSRDVLEHIERVVHHVRRLEQSTEATVQMHFSAQSNRTNDI MRTLTALTAVFLPLNLIAGIFGMNFEFIPLVHKQDGFWWAMGSMTATAVGLTLFFWRK RYLARTGQG" gene complement(279573..280580) /locus_tag="Dtpsy_0261" /db_xref="GeneID:7383845" CDS complement(279573..280580) /locus_tag="Dtpsy_0261" /EC_number="4.2.1.24" /note="PFAM: delta-aminolevulinic acid dehydratase; KEGG: ajs:Ajs_0266 delta-aminolevulinic acid dehydratase" /codon_start=1 /inference="protein motif:PRIAM:4.2.1.24" /transl_table=11 /product="Porphobilinogen synthase" /protein_id="YP_002551745.1" /db_xref="InterPro:IPR001731" /db_xref="GI:222109481" /db_xref="GeneID:7383845" /translation="MHLSSPTPFPANRPRRLRRDAFTRNLVRETVLTPHDFIYPVFVH EGSNLSVPVASMPGVERLSLDLLLPVAEECVKLGIPVLALFPSIDAALKTPDGKEALN PDGLIPRVVRKLKAEFPDLGVMTDVALDPYTSHGQDGLLDDTGYILNDETVELLVGQA LTHAQAGVDMVAPSDMMDGRIGAIREALEAHGQIYTRIMAYSAKYASAFYGPFRDAVG SAANLGRSNKNVYQMDPANTDEALREVALDLAEGADMVMVKPGMPYLDVVRRVKDEFK VPTFAYQVSGEYAMLKAAAANGWLDHDKVMMESLLAFKRAGADGVLTYFALDAARLLA K" gene 280741..281454 /locus_tag="Dtpsy_0262" /db_xref="GeneID:7383846" CDS 280741..281454 /locus_tag="Dtpsy_0262" /note="KEGG: ajs:Ajs_0267 biotin/lipoate A/B protein ligase" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0267" /transl_table=11 /product="biotin/lipoate A/B protein ligase" /protein_id="YP_002551746.1" /db_xref="GI:222109482" /db_xref="GeneID:7383846" /translation="MQTAVTRPYWRVWTYETPAVVLGCSQRAYLDGARARLAPGMELL QRPSGGGAVLCGPWMVSCSVVLPPSHPWVQGRLPDSYQGLGQLHAQVLAPWGVAARAL PPDQVAAANARGGPVVPWACYSSLAPWEVVDAAGRKLVGLAQRRQRAGVLLVAGTLVT PPDWALLCQALDQQGDEAALRARTVSCAELSARAPDAQQMASALRVALTQTLGEEAGD GAGEAADDSARQATAPNRP" gene 281664..282092 /locus_tag="Dtpsy_0263" /db_xref="GeneID:7383847" CDS 281664..282092 /locus_tag="Dtpsy_0263" /note="PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0268 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF03653" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551747.1" /db_xref="InterPro:IPR005265" /db_xref="GI:222109483" /db_xref="GeneID:7383847" /translation="MLWVKAFHIVFVASWFAGLFYLPRIFVNLAMVAPGSVAERERLL LMARKLLRFTTLLSVPAIALGLWLWLGYGIGKGPGNGWLHAKLAVVLLVVGYHHACAV LLRRLASNADQHSHRWFRWFNEVPVLLLLVAVVLVVVKPF" gene 282190..283287 /locus_tag="Dtpsy_0264" /db_xref="GeneID:7383848" CDS 282190..283287 /locus_tag="Dtpsy_0264" /note="PFAM: VanZ family protein; KEGG: ajs:Ajs_0269 VanZ family protein" /codon_start=1 /inference="protein motif:PFAM:PF04892" /transl_table=11 /product="VanZ family protein" /protein_id="YP_002551748.1" /db_xref="InterPro:IPR006976" /db_xref="GI:222109484" /db_xref="GeneID:7383848" /translation="MHKTSAWPLALIYAALIVFASLFPFDGWREQGISPWVFFSARIP PPYWTWFDVNMNIAGYAPLGFLLALAGLRSGWPRAAVPLAALAGALLSLSMEYLQIFL PRRVPSNMDFALNATGALLGALAAALLERFGAIAHWSRFRERWFVPHARGALVLLALW PWALLFPAALPFGLGQMWERLEAALIDALQDTPFLQWLPVREAPLEPLSPGAELMAVA LGLLIPCLLGYCVMRHAGRRMAFALATAAVGVGVTALSSLLSYGPTHAWEWLTLPARM GVLVALGAALAMAAVPRRGCAALLLLALMLHLNLLNQAPTSAYFAQTLQAWEQGRFIR FYGLGQWLGWLWPYGALVYVVLRVSRRDGDS" sig_peptide 282190..282252 /locus_tag="Dtpsy_0264" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.979) with cleavage site probability 0.973 at residue 21" gene 283297..283638 /locus_tag="Dtpsy_0265" /db_xref="GeneID:7383849" CDS 283297..283638 /locus_tag="Dtpsy_0265" /note="KEGG: ajs:Ajs_0270 ferredoxin-like protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0270" /transl_table=11 /product="ferredoxin-like protein" /protein_id="YP_002551749.1" /db_xref="GI:222109485" /db_xref="GeneID:7383849" /translation="MSDTTPQYYQRHIFFCLNERTNGENCCAHHGAQQAFDRCKMLVK QQGLMGPGKVRVNKAGCLDRCAGGPIAVVYPEGTWYTYVDESDIDEIVESHLKNGVVV ERLLTPPELGR" gene 283723..284370 /locus_tag="Dtpsy_0266" /db_xref="GeneID:7383850" CDS 283723..284370 /locus_tag="Dtpsy_0266" /note="KEGG: ajs:Ajs_0271 putative transmembrane protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0271" /transl_table=11 /product="putative transmembrane protein" /protein_id="YP_002551750.1" /db_xref="GI:222109486" /db_xref="GeneID:7383850" /translation="MNAQTERLTLTGAAGAIEAARDAAADGVPPRGVAVIAHPHPLFG GTMDNKVVQTLARAFVACGWTAVRFNFRGVGGTAGVHDEGRGELEDLLAVVRQVAPEG PGAVPIALAGFSFGAFVTSHALARVWGERAVERAVLVGTAASRFKVADVPAEAHLRTL VVHGEADDTVPLSAVMDWARPQTLPVTVVPGGGHFFHGQLPLLKGLVMRHLQSAP" gene 284449..285612 /locus_tag="Dtpsy_0267" /db_xref="GeneID:7383851" CDS 284449..285612 /locus_tag="Dtpsy_0267" /EC_number="3.4.16.4" /note="PFAM: beta-lactamase; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: ajs:Ajs_0272 penicillin-binding protein 6" /codon_start=1 /inference="protein motif:PRIAM:3.4.16.4" /transl_table=11 /product="Serine-type D-Ala-D-Ala carboxypeptidase" /protein_id="YP_002551751.1" /db_xref="InterPro:IPR001466" /db_xref="InterPro:IPR001967" /db_xref="InterPro:IPR012907" /db_xref="GI:222109487" /db_xref="GeneID:7383851" /translation="MKSLLSSLRTFACAALMAPAILWAQVPQPPEIAARNYMLVDVTA GQVLATKDIDAPVEQASLTKLMTGYLVFDALRAKKITLEQRLPVSERAWKMPGSRMFI DPKMQVPVDDLLKGMIVQSGNDATVALAEGVGGTVENFVRLMNEQAKALGMTNTAYKN PEGLTEPGHTTTARDLATLATRLMQDFPEYMHYYSTKQYRYEGTPASNSNNRNMLLFR DPSVDGLKTGHTAAAGYCLVATSKREFPNVGQRRLLSIVLGAASENARANESQKLLNW GYTAFDSVKLFDAGQAAATPAVWKGTQSTLKIGRPEAIVITVPSGSAGKVTTEIVRKD PLVAPFTKGQAIGTLKVKLGEQQVAEVPLVALEDVAQAGIFGRAWDAIRLWIK" sig_peptide 284449..284523 /locus_tag="Dtpsy_0267" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.999 at residue 25" gene 285763..286140 /locus_tag="Dtpsy_0268" /db_xref="GeneID:7383852" CDS 285763..286140 /locus_tag="Dtpsy_0268" /note="TIGRFAM: ribosomal protein S12; PFAM: ribosomal protein S12/S23; KEGG: ajs:Ajs_0273 30S ribosomal protein S12" /codon_start=1 /inference="protein motif:TFAM:TIGR00981" /transl_table=11 /product="ribosomal protein S12" /protein_id="YP_002551752.1" /db_xref="InterPro:IPR005679" /db_xref="InterPro:IPR006032" /db_xref="GI:222109488" /db_xref="GeneID:7383852" /translation="MPTINQLVRQGRTVEVVKSKSPAMENCPQRRGVCTRVYTTTPKK PNSALRKVAKVRLTNGFEVISYIGGEGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGSL DLQGVKDRKQARSKYGAKKPKAK" gene 286311..286784 /locus_tag="Dtpsy_0269" /db_xref="GeneID:7383853" CDS 286311..286784 /locus_tag="Dtpsy_0269" /note="TIGRFAM: ribosomal protein S7; PFAM: ribosomal protein S7; KEGG: ajs:Ajs_0274 30S ribosomal protein S7" /codon_start=1 /inference="protein motif:TFAM:TIGR01029" /transl_table=11 /product="ribosomal protein S7" /protein_id="YP_002551753.1" /db_xref="InterPro:IPR000235" /db_xref="InterPro:IPR005717" /db_xref="GI:222109489" /db_xref="GeneID:7383853" /translation="MPRRREVPKREILPDPKFGNVELSKFMNVIMEGGKKAVAERIIY GALDLISQKQPEKDALEVFVTAINNVKPMVEVKSRRVGGANYQVPVEVRPVRRLALSM RWIKEAARKRGEKSMAQRLANELMEATEGRGGAMKRRDEVHRMAEANKAFSHFRF" gene 286942..289050 /locus_tag="Dtpsy_0270" /db_xref="GeneID:7383854" CDS 286942..289050 /locus_tag="Dtpsy_0270" /note="TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; KEGG: ajs:Ajs_0275 translation elongation factor 2 (EF-2/EF-G)" /codon_start=1 /inference="protein motif:TFAM:TIGR00484" /transl_table=11 /product="translation elongation factor G" /protein_id="YP_002551754.1" /db_xref="InterPro:IPR000640" /db_xref="InterPro:IPR000795" /db_xref="InterPro:IPR004161" /db_xref="InterPro:IPR004540" /db_xref="InterPro:IPR005225" /db_xref="InterPro:IPR005517" /db_xref="GI:222109490" /db_xref="GeneID:7383854" /translation="MARKTPIERYRNIGISAHIDAGKTTTTERILFYTGVTHKLGEVH DGAATTDWMEQEQERGITITSAAVTCFWKGMDMSYPEHRFNIIDTPGHVDFTIEVERS MRVLDGACMVYCAVGGVQPQSETVWRQANKYKVPRLAFVNKMDRTGANFFKVVDQIKT RLKGNPVPVVVPIGAEDNFKGVVDLLKMKAIIWDEASQGMKFEYADIPAEVKETAEKW RENMVEAAAEASEELMNKYLDEGTLSEEDIKAGLRARTLAVEIQPMLCGTAFKNKGVQ RMLDAVIDYLPSPVDIPDVEGTDPDDEEKKLARKADDGEKFSALAFKLMTDPFVGQLT FVRVYSGVLSKGDTVFNSVKGKKERIGRIVQMMANERIEVDEIRAGDIAACVGLKDVT TGETLSDVDNPIILERMVFPEPVIAQAVEPKSKADQEKMGIALSRLASEDPSFRVRTD EESGQTIIAGMGELHLEIIVDRMKREFNVEANVGKPQVAYRETVRKTVTDVDGKFVRQ SGGKGQYGHVVFTLEPQEAGKGFEFVDEIKGGVVPREYIPAVEKGVIEALTSGVLAGY PVVDVKVRLTFGSYHDVDSSEQAFKMAAIFGFKEAARKANPVILEPMMAVEVETPEDY AGTVMGDLSSRRGMVQGMDDMVGGGKAIKAEVPLSEMFGYATQLRSMTQGRATYTMEF KHYAEAPRNVSEAIVAARAK" gene 289235..290425 /locus_tag="Dtpsy_0271" /db_xref="GeneID:7383855" CDS 289235..290425 /locus_tag="Dtpsy_0271" /note="TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain protein; elongation factor Tu domain 2 protein; KEGG: ajs:Ajs_3904 elongation factor Tu" /codon_start=1 /inference="protein motif:TFAM:TIGR00485" /transl_table=11 /product="translation elongation factor Tu" /protein_id="YP_002551755.1" /db_xref="InterPro:IPR000795" /db_xref="InterPro:IPR004160" /db_xref="InterPro:IPR004161" /db_xref="InterPro:IPR004541" /db_xref="InterPro:IPR005225" /db_xref="GI:222109491" /db_xref="GeneID:7383855" /translation="MAKGKFERTKPHVNVGTIGHVDHGKTTLTAAIATVLSKKFGGEA KGYDQIDNAPEEKARGITINTSHVEYETATRHYAHVDCPGHADYVKNMITGAAQMDGA ILVCSAADGPMPQTREHILLARQVGVPYIIVFLNKCDMVDDEELLELVEMEVRELLDK YDFPGDDTPIIRGSAKLALEGDQSDKGEPAIMRLAEALDTYIPTPERAVDGAFLMPVE DVFSISGRGTVVTGRVERGIIKVGEEIEIVGIRDTQKTTVTGVEMFRKLLDQGQAGDN VGLLLRGTKREDVERGQVLCKPGSIKPHTHFTAEVYVLSKDEGGRHTPFFNNYRPQFY FRTTDVTGSIELPADKEMVMPGDNVSITVKLINPIAMEEGLRFAIREGGRTVGAGVVA KIIA" gene 290453..290764 /locus_tag="Dtpsy_0272" /db_xref="GeneID:7383856" CDS 290453..290764 /locus_tag="Dtpsy_0272" /note="TIGRFAM: ribosomal protein S10; PFAM: ribosomal protein S10; KEGG: dac:Daci_0390 30S ribosomal protein S10" /codon_start=1 /inference="protein motif:TFAM:TIGR01049" /transl_table=11 /product="ribosomal protein S10" /protein_id="YP_002551756.1" /db_xref="InterPro:IPR001848" /db_xref="InterPro:IPR005731" /db_xref="GI:222109492" /db_xref="GeneID:7383856" /translation="MSKQKIRIRLKAFDYKLIDQSAAEIVDTAKRTGAIVKGPVPLPT RMKRFDILRSPHVNKTSRDQFEIRTHQRLMDIVDPTDKTVDALMKLDLPAGVDVEIKL Q" gene 291016..291690 /locus_tag="Dtpsy_0273" /db_xref="GeneID:7383857" CDS 291016..291690 /locus_tag="Dtpsy_0273" /note="TIGRFAM: ribosomal protein L3; PFAM: ribosomal protein L3; KEGG: ajs:Ajs_0278 50S ribosomal protein L3P" /codon_start=1 /inference="protein motif:TFAM:TIGR03625" /transl_table=11 /product="ribosomal protein L3" /protein_id="YP_002551757.1" /db_xref="InterPro:IPR000597" /db_xref="GI:222109493" /db_xref="GeneID:7383857" /translation="MSLSNSLGLLGRKVGMMRLFTDDGDAVPVTVVDVSNNRVTQVKT QENDGYVSLQVTFGSRKASRVTKPEAGHLAKAGVEAGEIIREFRVTPEVAGKYAAGAA VPVADVFAVGQKVDVQGTSIGKGFAGTIKRHNFGSQRASHGNSRSHNVPGSIGMAQDP GRVFPGKKMTGHLGDVTVTTQNLDVVRIDEARQLLLIKGAVPGSKGGFVTVRPAVKAQ ASKGAN" gene 291690..292310 /locus_tag="Dtpsy_0274" /db_xref="GeneID:7383858" CDS 291690..292310 /locus_tag="Dtpsy_0274" /note="PFAM: ribosomal protein L4/L1e; KEGG: ajs:Ajs_0279 50S ribosomal protein L4" /codon_start=1 /inference="protein motif:PFAM:PF00573" /transl_table=11 /product="ribosomal protein L4/L1e" /protein_id="YP_002551758.1" /db_xref="InterPro:IPR002136" /db_xref="GI:222109494" /db_xref="GeneID:7383858" /translation="MQLELLNEQGQAASKVDVPETVFDRQYNEDLIHQIVVAYQANAR QGTRAQKDREQVKHSTKKPFKQKGTGNARAGMTSSPLWRGGGRIFPNLPEENFSQKIN KKMYRAGMASILSQLAREGRLAVVDSLKLDTPKTKVLADKFKAMNLQSVMVIADEVDE NLYLASRNLKNVFVTEPRYADPVSLVHYKKVLVTKGAIDKLKEMFA" gene 292307..292621 /locus_tag="Dtpsy_0275" /db_xref="GeneID:7383859" CDS 292307..292621 /locus_tag="Dtpsy_0275" /note="PFAM: Ribosomal protein L25/L23; KEGG: ajs:Ajs_0280 50S ribosomal protein L23P" /codon_start=1 /inference="protein motif:PFAM:PF00276" /transl_table=11 /product="Ribosomal protein L25/L23" /protein_id="YP_002551759.1" /db_xref="InterPro:IPR013025" /db_xref="GI:222109495" /db_xref="GeneID:7383859" /translation="MSTLKFDEGRLMQVLVAPIVSEKATMVAEKSNAVTFKVLQNATK PEIKAAVELMFKVEVKGVSVVNTKGKTKRFGKTMGRRDNVRKAYVLLKEGQELNLSGE AA" gene 292625..293449 /locus_tag="Dtpsy_0276" /db_xref="GeneID:7383860" CDS 292625..293449 /locus_tag="Dtpsy_0276" /note="TIGRFAM: ribosomal protein L2; PFAM: ribosomal protein L2; KEGG: ajs:Ajs_0281 50S ribosomal protein L2" /codon_start=1 /inference="protein motif:TFAM:TIGR01171" /transl_table=11 /product="ribosomal protein L2" /protein_id="YP_002551760.1" /db_xref="InterPro:IPR002171" /db_xref="InterPro:IPR005880" /db_xref="GI:222109496" /db_xref="GeneID:7383860" /translation="MAVIKIKPTSPGQRGTVKISRDHLYKGEAFAGLLEPQFQKAGRN NNGHITTRHKGGGHKHHYRVVDFRRNKDAIPAKVERIEYDPNRTAHIALVCYADGERR YIIAPRNLEVGATIVSGSEAPIRVGNTLPIRNIPVGSTIHCIELKPGAGAQIARSAGT SATLLAREGVYAQVRMRSGEVRKIHIECRATIGEVANEEHSLRQLGKAGVKRWMGIRP TVRGVAMNPIDHPHGGGEGRTGEGRHAVDPWGNLTKGYRTRNNKRTQVMIVSRRKK" gene 293460..293738 /locus_tag="Dtpsy_0277" /db_xref="GeneID:7383861" CDS 293460..293738 /locus_tag="Dtpsy_0277" /note="TIGRFAM: ribosomal protein S19; PFAM: ribosomal protein S19/S15; KEGG: ajs:Ajs_0282 SSU ribosomal protein S19P" /codon_start=1 /inference="protein motif:TFAM:TIGR01050" /transl_table=11 /product="ribosomal protein S19" /protein_id="YP_002551761.1" /db_xref="InterPro:IPR002222" /db_xref="InterPro:IPR005732" /db_xref="GI:222109497" /db_xref="GeneID:7383861" /translation="MTRSLKKGPFVDHHLVAKVEKAIATKDKKPVKTWSRRSMVLPEF IGLTIAVHNGKQHVPVYVTDQMVGHKLGEFALTRTFKGHPADKKVQKK" gene 293748..294080 /locus_tag="Dtpsy_0278" /db_xref="GeneID:7383862" CDS 293748..294080 /locus_tag="Dtpsy_0278" /note="TIGRFAM: ribosomal protein L22; PFAM: ribosomal protein L22/L17; KEGG: ajs:Ajs_0283 50S ribosomal protein L22P" /codon_start=1 /inference="protein motif:TFAM:TIGR01044" /transl_table=11 /product="ribosomal protein L22" /protein_id="YP_002551762.1" /db_xref="InterPro:IPR001063" /db_xref="InterPro:IPR005727" /db_xref="GI:222109498" /db_xref="GeneID:7383862" /translation="MSETRAVLRGVRLSVDKGRLVADLIRGKKVDQALNILAFTQKKA AVIVKKVLESAIANAEHNDGADIDDLKVKTIFVEQGTTLKRFTARAKGRGNRISKPTC HIYVTVGN" gene 294097..294963 /locus_tag="Dtpsy_0279" /db_xref="GeneID:7383863" CDS 294097..294963 /locus_tag="Dtpsy_0279" /note="KEGG: ajs:Ajs_0284 30S ribosomal protein S3; TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; KH type 2 domain protein; Ribosomal protein S3 domain; SMART: KH domain protein" /codon_start=1 /inference="protein motif:TFAM:TIGR01009" /transl_table=11 /product="ribosomal protein S3" /protein_id="YP_002551763.1" /db_xref="InterPro:IPR001351" /db_xref="InterPro:IPR004044" /db_xref="InterPro:IPR004087" /db_xref="InterPro:IPR004088" /db_xref="InterPro:IPR005704" /db_xref="InterPro:IPR008282" /db_xref="GI:222109499" /db_xref="GeneID:7383863" /translation="MGQKIHPTGFRLAVSRNWASRWYASNRDFAGMLAEDIKVREYLK AKLKNAAVSRILIERPAKNARITIFSARPGVVIGKKGEDIENLKKELATRLGVPVAVN IEEVRKPEIDAKLIADSITQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGI EIARTEWYREGRVPLHTLRADIDYGTSEAKTTYGVIGVKVWVYKGDTLGRNDLPAAET PRPEEERRPRGPRRDGRPGDRAGAGRGGRRPMGTNAAPADGSDKPAGAGGDSVKRVKS APAAAAADGKGE" gene 294966..295382 /locus_tag="Dtpsy_0280" /db_xref="GeneID:7383864" CDS 294966..295382 /locus_tag="Dtpsy_0280" /note="TIGRFAM: ribosomal protein L16; PFAM: ribosomal protein L16; KEGG: ajs:Ajs_0285 50S ribosomal protein L16" /codon_start=1 /inference="protein motif:TFAM:TIGR01164" /transl_table=11 /product="ribosomal protein L16" /protein_id="YP_002551764.1" /db_xref="InterPro:IPR000114" /db_xref="GI:222109500" /db_xref="GeneID:7383864" /translation="MLQPARRKFRKEQKGRNTGVATRGNSVAFGDFGLKCTDRGRLTA RQIEAARRAISRHVKRGGRIWIRVFPDKPISTKPAEVRMGNGKGNPEYYVAEIQPGKV VFEIVGVPEELAREAFRLAAAKLPLRTTFVARQIGA" gene 295395..295592 /locus_tag="Dtpsy_0281" /db_xref="GeneID:7383865" CDS 295395..295592 /locus_tag="Dtpsy_0281" /note="TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29; KEGG: ajs:Ajs_0286 50S ribosomal protein L29P" /codon_start=1 /inference="protein motif:TFAM:TIGR00012" /transl_table=11 /product="ribosomal protein L29" /protein_id="YP_002551765.1" /db_xref="InterPro:IPR001854" /db_xref="GI:222109501" /db_xref="GeneID:7383865" /translation="MTKSAELRQKDVAGLEAEIKSLQKAHFGLRMQKATQQLGNTATL KATRRDIARAKTILAEKQAAK" gene 295602..295871 /locus_tag="Dtpsy_0282" /db_xref="GeneID:7383866" CDS 295602..295871 /locus_tag="Dtpsy_0282" /note="TIGRFAM: ribosomal protein S17; PFAM: ribosomal protein S17; KEGG: ajs:Ajs_0287 SSU ribosomal protein S17P" /codon_start=1 /inference="protein motif:TFAM:TIGR03635" /transl_table=11 /product="ribosomal protein S17" /protein_id="YP_002551766.1" /db_xref="InterPro:IPR000266" /db_xref="GI:222109502" /db_xref="GeneID:7383866" /translation="MTEAKKSLKRTLVGKVVSDKRAKTVTVLVERRVKHPIYDKIMIK SSKYHAHDENGEYKMGDTIEITESRPLSKTKNWVATRLVQKAGLL" gene 295986..296492 /locus_tag="Dtpsy_0283" /db_xref="GeneID:7383867" CDS 295986..296492 /locus_tag="Dtpsy_0283" /note="PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: ajs:Ajs_0288 redoxin domain-containing protein" /codon_start=1 /inference="protein motif:PFAM:PF08534" /transl_table=11 /product="Redoxin domain protein" /protein_id="YP_002551767.1" /db_xref="InterPro:IPR000866" /db_xref="InterPro:IPR013740" /db_xref="GI:222109503" /db_xref="GeneID:7383867" /translation="MIQVGDTLPAITLMEYSEVEGNGCSLGPNPVDVQKAAAGKTIAL FAVPGAFTPTCSAKHVPGYVEQAGDLKAAGVDEIWCLSVNDAFVMGAWARDQKTDGKV RMLADGDAAFAKATGLTLDLNGKGLGLRSNRYSMLVKDGKVVALNVEAPGKFEVSDAA TLLGQAKG" gene complement(296636..297151) /locus_tag="Dtpsy_0284" /db_xref="GeneID:7383868" CDS complement(296636..297151) /locus_tag="Dtpsy_0284" /note="PFAM: GCN5-related N-acetyltransferase; KEGG: ajs:Ajs_0289 GCN5-related N-acetyltransferase" /codon_start=1 /inference="protein motif:PFAM:PF00583" /transl_table=11 /product="GCN5-related N-acetyltransferase" /protein_id="YP_002551768.1" /db_xref="InterPro:IPR000182" /db_xref="GI:222109504" /db_xref="GeneID:7383868" /translation="MPDSFCTVDHSPDVTLLSPALPHEMHVVRDIFQEYADSLDVDLS FQNFAQELATLPGEYAPPRGHILLAEVEGSIAGCCALRPLDTADYPNACEMKRLYVRK AFRGFGLGRQLAEAMLDQARQAGYACVLLDTLDGMESARALYSELGFEEIPPYYHNPL PGSHYLKAEIY" gene complement(297193..297861) /locus_tag="Dtpsy_0285" /db_xref="GeneID:7383869" CDS complement(297193..297861) /locus_tag="Dtpsy_0285" /note="PFAM: cytochrome B561; KEGG: ajs:Ajs_0290 cytochrome b561" /codon_start=1 /inference="protein motif:PFAM:PF01292" /transl_table=11 /product="cytochrome B561" /protein_id="YP_002551769.1" /db_xref="InterPro:IPR011577" /db_xref="GI:222109505" /db_xref="GeneID:7383869" /translation="MPHTVRIWDLPTRLFHWSLAVTTVALVVTAKLGGNAMQWHLRLG YVMLALLAFRLAWGLVGGRWSRFASFLPTPARLRSHFANQEGKVTSPGHSPLGALSVF ALLAVLLAQVGTGLLSDDEIAFAGPLTRFVSGEWVSQATWYHKDVGQFLLLGLVALHL AAIVFYALVRRQALVGAMVHGDRQLPGATPASRDDALSRAGAALVAALSALLAWWVAS LGAF" gene 298042..298503 /locus_tag="Dtpsy_0286" /db_xref="GeneID:7383870" CDS 298042..298503 /locus_tag="Dtpsy_0286" /note="PFAM: cytochrome c prime; KEGG: ajs:Ajs_0291 cytochrome c, class II" /codon_start=1 /inference="protein motif:PFAM:PF01322" /transl_table=11 /product="cytochrome c prime" /protein_id="YP_002551770.1" /db_xref="InterPro:IPR002321" /db_xref="InterPro:IPR012127" /db_xref="InterPro:IPR015984" /db_xref="GI:222109506" /db_xref="GeneID:7383870" /translation="MPIKALALAATAAAATLVSLPAAAQFAKPEDAIKYRQGALFVMG QHFGRIGAMANGRVPFDAKAAQENADTVAALAALPWAGFGPGTDKGAPTKAKPGVWTE QAKFQEHADKFQAEAAKLAAAAKTGSLDNLKAAFGPAANSCKACHDAYRAR" sig_peptide 298042..298116 /locus_tag="Dtpsy_0286" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.822 at residue 25" gene complement(298599..299102) /locus_tag="Dtpsy_0287" /db_xref="GeneID:7383871" CDS complement(298599..299102) /locus_tag="Dtpsy_0287" /note="PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: ajs:Ajs_0292 redoxin domain-containing protein" /codon_start=1 /inference="protein motif:PFAM:PF08534" /transl_table=11 /product="Redoxin domain protein" /protein_id="YP_002551771.1" /db_xref="InterPro:IPR000866" /db_xref="InterPro:IPR013740" /db_xref="GI:222109507" /db_xref="GeneID:7383871" /translation="MQIKKWLAAGALVAGAAVGAVVVLGSGTSQAPQSTFVLLDGSQQ TTADLKGKVALVNFWATSCTTCVAEMPEIVATYDKYKGQGFETLAVAMSYDPPSYVVN FTETRKLPFKVAIDNTGAVAKAWGDVKLTPTTYIVNKRGEIVKSYIGAPDFEELHKLI ERLLAEA" sig_peptide complement(299025..299102) /locus_tag="Dtpsy_0287" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.735 at residue 26" gene 299356..299919 /locus_tag="Dtpsy_0288" /db_xref="GeneID:7383872" CDS 299356..299919 /locus_tag="Dtpsy_0288" /note="KEGG: ajs:Ajs_0293 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0293" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551772.1" /db_xref="GI:222109508" /db_xref="GeneID:7383872" /translation="MTLAPAGARRLLTLAFAASMLALAACSPALNWRSVTLPDAGLAL TLPCKPEYASRPVDLGTGAVPLAMVGCEADGATFAVSHMPLAEAAQAGAMLARWQAAV QAGMRASQPAAPVAFVPTRALAVPQSVRLQAQGQAPGGSAVTVDAVWFARLEGGQARL YHAAVYAPRRTTATAADTFFASLALQP" sig_peptide 299356..299451 /locus_tag="Dtpsy_0288" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.997) with cleavage site probability 0.552 at residue 32" gene 299916..301154 /locus_tag="Dtpsy_0289" /db_xref="GeneID:7383873" CDS 299916..301154 /locus_tag="Dtpsy_0289" /note="PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_0294 major facilitator superfamily transporter" /codon_start=1 /inference="protein motif:PFAM:PF07690" /transl_table=11 /product="major facilitator superfamily MFS_1" /protein_id="YP_002551773.1" /db_xref="InterPro:IPR007114" /db_xref="InterPro:IPR011701" /db_xref="GI:222109509" /db_xref="GeneID:7383873" /translation="MSVLTRRTAVVVFLAFAFTYFISALLRAITATLAPTLEAEFQLH ARDLGLLAGGYFLGFSLTQLPLGRWLDRHGPRVVLLGFLGVAVAGCLVFSWATGFSGL LAGRMLCGAGVSACLMAPLTGFRRWLEPGAQLRANSWMLMTGSLGMVASTLPVQWLLP LAGWRPLFWGLAALIVLAMALLALGVPRWPQAPAESGAGVETGYAQVWRHPYFLRTAP LGFFCYGGMVAVQTLWAAPWMQHVAGYTPLQAATGLFWINVSMLITFWTWGMASPWLL RRVGGADPVMAASLPLSLLVLAGIVLAGGRAGAAAWALYCVSCTSVALSQPAVALAFP QALAGRALSAYNLVIFAGVFAVQWGIGLAVDAFVAAGLDMARAYRAAMALHLACTAGA YAWFMARRGHGDNALHCSTP" sig_peptide 299916..300002 /locus_tag="Dtpsy_0289" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.981) with cleavage site probability 0.771 at residue 29" gene 301151..301600 /locus_tag="Dtpsy_0290" /db_xref="GeneID:7383874" CDS 301151..301600 /locus_tag="Dtpsy_0290" /note="PFAM: PTS system fructose subfamily IIA component; KEGG: ajs:Ajs_0295 PTS system fructose subfamily IIA component" /codon_start=1 /inference="protein motif:PFAM:PF03610" /transl_table=11 /product="PTS system fructose subfamily IIA component" /protein_id="YP_002551774.1" /db_xref="InterPro:IPR004701" /db_xref="GI:222109510" /db_xref="GeneID:7383874" /translation="MNTRLLIIAHAPLAHALRECALHVFPDCWQEVLALDVPPHEAPE ATLLAARALMEQQGEASVLVLSDLFGATPCNVAQRLVDGLQSRLVAGVNLPMLLRAVS YRSEPLDALVARALVGGTQGVMQVGAAAPQNQNRRPSHDQEEHHHQQ" gene 301569..301838 /locus_tag="Dtpsy_0291" /db_xref="GeneID:7383875" CDS 301569..301838 /locus_tag="Dtpsy_0291" /note="TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: ajs:Ajs_0296 phosphotransferase system, phosphocarrier protein HPr" /codon_start=1 /inference="protein motif:TFAM:TIGR01003" /transl_table=11 /product="phosphocarrier, HPr family" /protein_id="YP_002551775.1" /db_xref="InterPro:IPR001020" /db_xref="InterPro:IPR002114" /db_xref="InterPro:IPR005698" /db_xref="GI:222109511" /db_xref="GeneID:7383875" /translation="MIKKNITISNKLGLHARASAKLTKMAGSFPCDVWMSKGERRINA KSIMGVMMLAAGMGSEVEIETDGAQEQEAMDALVALIDGKFGEGE" gene 301857..303626 /locus_tag="Dtpsy_0292" /db_xref="GeneID:7383876" CDS 301857..303626 /locus_tag="Dtpsy_0292" /note="TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: ajs:Ajs_0297 phosphoenolpyruvate--protein phosphotransferase" /codon_start=1 /inference="protein motif:TFAM:TIGR01417" /transl_table=11 /product="phosphoenolpyruvate-protein phosphotransferase" /protein_id="YP_002551776.1" /db_xref="InterPro:IPR000121" /db_xref="InterPro:IPR006318" /db_xref="InterPro:IPR008279" /db_xref="InterPro:IPR008731" /db_xref="GI:222109512" /db_xref="GeneID:7383876" /translation="MTFSIHGLAVARGIAIGRAVLAVSSRMEVVHYFIEPGQVEAEIL RARRGRDAVAEELQRLQADMPHDAPPELAALLDVHLMLLQDEMLVNGVKHWITDRLYN AEWALTTQLEIISRQFDEMEDDYLRERKADLEQVVERILRHMRGVASPVAPPPSAPRR QAEAGAEAEFLLGGAADAPLVLVAHDLSPADMLQFKQSVFAGFVTDVGGKTSHTAIVA RSMDIPAVVGARSASQLVRQDDWVIIDGDAGVVIVDPTPIILAEYGFRQRQITLERER LMRLRHTPAVTLDAQAIELLANIEQPGDAGAALRAGAAGVGLFRSEFLFMGRSGRLPD EEEQYRAYREAVEGMQGLPVTIRTVDVGADKPLDKGYKDSSLNPALGLRAIRWSLADP AMFRTQLRAVLRAAAHGPVRLLFPMLAHVSEIRQTLAQVDLARAELDARSAAYGAVQL GAMIEVPAAALMVRQFLRYFDFLSIGTNDLIQYALAIDRADEAVAHLYDPLHPAVLRL VADVIAEGARQGKSVSVCGEMAGDVAMTRLLLGLGLRSFSMQPAQILAVKQEVLRADA RKLGEWAQQLLDADDPAASLQAP" gene complement(303698..304678) /locus_tag="Dtpsy_0293" /db_xref="GeneID:7383877" CDS complement(303698..304678) /locus_tag="Dtpsy_0293" /note="KEGG: ajs:Ajs_0298 lipoyl synthase; TIGRFAM: lipoic acid synthetase; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB" /codon_start=1 /inference="protein motif:TFAM:TIGR00510" /transl_table=11 /product="lipoic acid synthetase" /protein_id="YP_002551777.1" /db_xref="InterPro:IPR003698" /db_xref="InterPro:IPR006638" /db_xref="InterPro:IPR007197" /db_xref="GI:222109513" /db_xref="GeneID:7383877" /translation="MSTPDVVREAQSTEAYNPLAKQKAAAKLSRIPIKVEQGEVLKKP EWIRVKAGSPTTRFYEIKNILREHKLHTVCEEASCPNIGECFGRGTATFMIMGDKCTR RCPFCDVGHGRPDPLDKDEPLNLAKTIAALRLKYVVITSVDRDDLRDGGSGHFVECIQ RTRELSPSTQIEILTPDFRGRDDRALEILKAAPPDVMNHNLETVPRLYKEARPGSDYQ FSLNLLKKFKQLHPGVPTKSGLMVGLGETDEEILEVMRDMRAHGIEMLTIGQYLAPSN SHLPVRRYVHPDTFKMFEEEAYKMGFSHAAVGAMVRSSYHADQQAHAAGV" gene complement(304696..305376) /locus_tag="Dtpsy_0294" /db_xref="GeneID:7383878" CDS complement(304696..305376) /locus_tag="Dtpsy_0294" /note="TIGRFAM: lipoate-protein ligase B; PFAM: biotin/lipoate A/B protein ligase; KEGG: ajs:Ajs_0299 lipoate-protein ligase B" /codon_start=1 /inference="protein motif:TFAM:TIGR00214" /transl_table=11 /product="lipoate-protein ligase B" /protein_id="YP_002551778.1" /db_xref="InterPro:IPR000544" /db_xref="InterPro:IPR004143" /db_xref="GI:222109514" /db_xref="GeneID:7383878" /translation="MLGRVDYPATVAAMQRFTEERTDETPDELWICEHPAVYTQGLAG KSDHVLSPGGIPVVATNRGGQVTHHGPGQVVAYPLIDLRRAGYYVKEYVYRIEEAVIR TLGHYGVTGHRVAGAPGIYVRLDDPHGHSMLPQRPQKRAHADGPPQPDFTGLGKIAAL GIKVARHCTYHGVALNVAMDLEPFSRINPCGYAGLQTVDLSTIGVHIPWDDAAAMLGQ QLARRLAP" gene complement(305400..305696) /locus_tag="Dtpsy_0295" /db_xref="GeneID:7383879" CDS complement(305400..305696) /locus_tag="Dtpsy_0295" /note="PFAM: protein of unknown function DUF493; KEGG: ajs:Ajs_0300 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF04359" /transl_table=11 /product="protein of unknown function DUF493" /protein_id="YP_002551779.1" /db_xref="InterPro:IPR007454" /db_xref="GI:222109515" /db_xref="GeneID:7383879" /translation="MTTPSQPSSADPRKDSLIEYPSRFPIKVMGANVNGFVHAVTEVA RRFDPDFDASTIELRDSRAGNYLGVTITVTATSREQLDDLYRALTSHPMVKVVL" gene 305937..306425 /locus_tag="Dtpsy_0296" /db_xref="GeneID:7383880" CDS 305937..306425 /locus_tag="Dtpsy_0296" /note="PFAM: ATP synthase I chain; KEGG: ajs:Ajs_0301 putative ATP synthase protein I" /codon_start=1 /inference="protein motif:PFAM:PF03899" /transl_table=11 /product="ATP synthase I chain" /protein_id="YP_002551780.1" /db_xref="InterPro:IPR005598" /db_xref="GI:222109516" /db_xref="GeneID:7383880" /translation="MAQASSNDKKIASETESEVEDSDFKPLTAQEAREWRSRHPALSV WRIVWGQAAVGAVVALLAWWLTGRLPVAWSAGYGALSVVVPAALFARGMARRRSTAGA AMVGLLGWELVKIALTVAMLAAAPRVVPGLSWLALLVGMVVTMKTYWIALLARPGVRR TD" gene 306448..307311 /locus_tag="Dtpsy_0297" /db_xref="GeneID:7383881" CDS 306448..307311 /locus_tag="Dtpsy_0297" /note="TIGRFAM: ATP synthase F0, A subunit; PFAM: H+transporting two-sector ATPase A subunit; KEGG: ajs:Ajs_0302 F0F1 ATP synthase subunit A" /codon_start=1 /inference="protein motif:TFAM:TIGR01131" /transl_table=11 /product="ATP synthase F0, A subunit" /protein_id="YP_002551781.1" /db_xref="InterPro:IPR000568" /db_xref="GI:222109517" /db_xref="GeneID:7383881" /translation="MAADAHAPTASEYIVHHLQHLQNIKQKSIIDFSVVNLDSVAVSV ILGVLGLFVMWLAARTATSGVPGRFQAAVEMLVEMVDNQAKANIHNAQSRKFIAPLAL TVFVWIFLMNAMDLLPVDLLPVLWQGATGDSHAYLRVVPTADLSTTLGLSSAVLILCF VYSIKIKGMGGWAHELVTAPFGTSKNPVFALILGVVNLLMQIIEYVAKTVSHGMRLFG NMYAGELVFMLIALMGGAAAMSLSGVLLPVGHIIAGSIWAIFHILIITLQAFIFMMLT LIYLGQAHEAH" gene 307363..307611 /locus_tag="Dtpsy_0298" /db_xref="GeneID:7383882" CDS 307363..307611 /locus_tag="Dtpsy_0298" /note="TIGRFAM: ATP synthase F0, C subunit; PFAM: H+transporting two-sector ATPase C subunit; KEGG: dac:Daci_0415 F0F1 ATP synthase subunit C" /codon_start=1 /inference="protein motif:TFAM:TIGR01260" /transl_table=11 /product="ATP synthase F0, C subunit" /protein_id="YP_002551782.1" /db_xref="InterPro:IPR000454" /db_xref="InterPro:IPR002379" /db_xref="InterPro:IPR005953" /db_xref="GI:222109518" /db_xref="GeneID:7383882" /translation="MENILGLVALACGLIVGLGAIGASIGIALMGGKFLESSARQPEL INELQTKMFILAGLIDAAFLIGVAIALLFAFANPFVLA" sig_peptide 307363..307431 /locus_tag="Dtpsy_0298" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.958) with cleavage site probability 0.812 at residue 23" gene 307647..308117 /locus_tag="Dtpsy_0299" /db_xref="GeneID:7383883" CDS 307647..308117 /locus_tag="Dtpsy_0299" /note="TIGRFAM: ATP synthase F0, B subunit; PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: ajs:Ajs_0304 F0F1 ATP synthase subunit B" /codon_start=1 /inference="protein motif:TFAM:TIGR01144" /transl_table=11 /product="ATP synthase F0, B subunit" /protein_id="YP_002551783.1" /db_xref="InterPro:IPR002146" /db_xref="InterPro:IPR005864" /db_xref="GI:222109519" /db_xref="GeneID:7383883" /translation="MSINATLFVQAIVFLILVLFTMKFVWPPIAKALDERAQKIADGL AAADRAKTELAAADQRVKQELAAASNETATRLADAERRAQAIIEEAKARANDEGNKIV AAARAEAEQQAIQAREALREQVAALAVKGAEQILRKEVNAGVHADLLNRLKTEL" gene 308129..308671 /locus_tag="Dtpsy_0300" /db_xref="GeneID:7383884" CDS 308129..308671 /locus_tag="Dtpsy_0300" /note="TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; KEGG: ajs:Ajs_0305 F0F1 ATP synthase subunit delta" /codon_start=1 /inference="protein motif:TFAM:TIGR01145" /transl_table=11 /product="ATP synthase F1, delta subunit" /protein_id="YP_002551784.1" /db_xref="InterPro:IPR000711" /db_xref="GI:222109520" /db_xref="GeneID:7383884" /translation="MAELATIARPYAEALYKACTDQAGVDLNGATAWVDELAAIAANP QLRQLADNPKVTGEQVFDVIVGVARSALPDLAKNFLRTVIDNGRVQALPEIAAQFRTL VNRSHGTSDAVVYSAFPLDAGALTDVGATLEKRFGRKLNLSVQLDETLIGGVRVVVGD EVLDTSVKARLEQMKAALTA" gene 308717..310276 /locus_tag="Dtpsy_0301" /db_xref="GeneID:7383885" CDS 308717..310276 /locus_tag="Dtpsy_0301" /EC_number="3.6.3.14" /note="KEGG: ajs:Ajs_0306 F0F1 ATP synthase subunit alpha; TIGRFAM: ATP synthase F1, alpha subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; ATP synthase F1 alpha subunit" /codon_start=1 /inference="protein motif:TFAM:TIGR00962" /transl_table=11 /product="ATP synthase F1, alpha subunit" /protein_id="YP_002551785.1" /db_xref="InterPro:IPR000194" /db_xref="InterPro:IPR000793" /db_xref="InterPro:IPR004100" /db_xref="InterPro:IPR005294" /db_xref="GI:222109521" /db_xref="GeneID:7383885" /translation="MQLNPAEISELIKSRIEGLAASSDIRNQGTVVSVTDGIVRVHGL SDVMQGEMLEFPAAADGQPSFGLALNLERDSVGAVILGEYEHISEGDTVKCTGRILEV PVGPELIGRVVNALGQPIDGKGPINAKMTDVIEKVAPGVIARQSVDQPLQTGLKSIDS MVPIGRGQRELIIGDRQTGKTAVAIDAIINQKGQGVTCIYVAIGQKASSIKNVVRALE QAGAMEYTIVVAASASESAAMQYVSAYSGCTMGEYFRDRGEDALIVYDDLSKQAVAYR QVSLLLRRPPGREAFPGDVFYLHSRLLERAARVNADYVEAFTKGEVKGKTGSLTALPV IETQAGDVSAFVPTNVISITDGQIFLETSLFNAGIRPAINAGISVSRVGGAAQTKLIK GLSGGIRTDLAQYRELAAFAQFASDLDEATRKQLDRGARVTELLKQPQYSPLSTALMG ATLFTVNKGFLDDVDVKKVLAFEAGLHQYLKTSHGALLDRLQQNRAFDKEGKDEAELT QAITAFKKSFV" gene 310295..311161 /locus_tag="Dtpsy_0302" /db_xref="GeneID:7383886" CDS 310295..311161 /locus_tag="Dtpsy_0302" /EC_number="3.6.3.14" /note="KEGG: ajs:Ajs_0307 ATP synthase F1, gamma subunit; TIGRFAM: ATP synthase F1, gamma subunit; PFAM: H+transporting two-sector ATPase gamma subunit" /codon_start=1 /inference="protein motif:TFAM:TIGR01146" /transl_table=11 /product="ATP synthase F1, gamma subunit" /protein_id="YP_002551786.1" /db_xref="InterPro:IPR000131" /db_xref="GI:222109522" /db_xref="GeneID:7383886" /translation="MAAGKEIRGKIKSVENTKKITKAMEMVAASKMRKAQDRMRAARP YAEKVRNIAAHLGEANPEYVHPFMKANDAKAAGIIVVTTDKGLCGGMNTNVLRAVTTK LRELQSTGVDVQSVAIGNKGLGFLNRVGAKVVAHATGLGDTPHLDKLIGPVKVLLDAY AEGKINAVYLSYTKFINTMKQESVVEQLLPLSSEQMQAQKTGHGWDYIYEPDAQSVID ELLVRYVESLIYQAVAENMASEQSARMVAMKAATDNAGNVINELKLVYNKTRQAAITK ELSEIVAGAAAV" gene 311204..312610 /locus_tag="Dtpsy_0303" /db_xref="GeneID:7383887" CDS 311204..312610 /locus_tag="Dtpsy_0303" /note="TIGRFAM: ATP synthase F1, beta subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; KEGG: ajs:Ajs_0308 F0F1 ATP synthase subunit beta" /codon_start=1 /inference="protein motif:TFAM:TIGR01039" /transl_table=11 /product="ATP synthase F1, beta subunit" /protein_id="YP_002551787.1" /db_xref="InterPro:IPR000194" /db_xref="InterPro:IPR000793" /db_xref="InterPro:IPR004100" /db_xref="InterPro:IPR005722" /db_xref="GI:222109523" /db_xref="GeneID:7383887" /translation="MAQVQGKIVQCIGAVVDVEFPRDQMPKVYDALKLEGSPLTLEVQ QQLGDGVVRTIALGSSDGLKRGLMVTNTGNPITVPVGKATLGRIMDVLGNPIDERGPV DQSLTASIHRKAPAYDELSPSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNM MELINNIAKAHSGLSVFAGVGERTREGNDFYHEMADSGVVNLENLGESKVAMVYGQMN EPPGNRLRVALTGLTIAESFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQ PTLAEEMGRLQERITSTKVGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIA ALGIYPAVDPLDSTSRQLDPQVVGEEHYQVARQVQGTLQRYKELRDIIAILGMDELAP EDKLVVARARKIQRFLSQPFHVAEVFTGSPGKYVPLSETIRGFKMIVAGECDHLPEQA FYMVGTIDEAFEKAKKVA" gene 312686..313102 /locus_tag="Dtpsy_0304" /db_xref="GeneID:7383888" CDS 312686..313102 /locus_tag="Dtpsy_0304" /note="TIGRFAM: ATP synthase F1, epsilon subunit; PFAM: H+transporting two-sector ATPase delta/epsilon subunit; KEGG: ajs:Ajs_0309 F0F1 ATP synthase subunit epsilon" /codon_start=1 /inference="protein motif:TFAM:TIGR01216" /transl_table=11 /product="ATP synthase F1, epsilon subunit" /protein_id="YP_002551788.1" /db_xref="InterPro:IPR001469" /db_xref="GI:222109524" /db_xref="GeneID:7383888" /translation="MNTIHVDVVSAEESIFSGEARFVALPGEAGELGIYPRHTPLITR IKPGSVRIELPDGNEEFVFVAGGILEVQPDCVTVLSDTAIRGRDLDDQKAQEAKAAAE EALKNAKSEIDLARAQSELAVMAAQIAALRKFRQKR" gene 313233..314333 /locus_tag="Dtpsy_0305" /db_xref="GeneID:7383889" CDS 313233..314333 /locus_tag="Dtpsy_0305" /note="KEGG: ajs:Ajs_0310 putative mRNA 3-end processing factor" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0310" /transl_table=11 /product="putative mRNA 3-end processing factor" /protein_id="YP_002551789.1" /db_xref="GI:222109525" /db_xref="GeneID:7383889" /translation="MVNPLAESAADALVVARPEGLYCPPGGFYIDPWRPVDRAVITHG HGDHARRGHGHYLAHEHSAGVLRGRLGADIALQTLAYGEPLHHNGVRISLHPAGHVLG SAQVRLEHGGRVWVASGDYKLEADGTCAPFEPVRCDTFITESTFGLPIYRWPAQAVLQ AQINDWWRSNAAMRRPSVLFCYAFGKAQRILHGVDASIGPLLMHGAVEPLNAAYRAAG VRLPPTQGATDASLDAATRETALVLAPPSAQGTPWMRRFPRHADAFASGWMQLRGTRR RRGVDRGFVLSDHADWPGLQQAIAATGAERVFVTHGSVAVMVRWLREQGLDAQAFATE YGDEDEAAPTDAPTAAPTAPEGDAGDAAGGTS" gene 314333..316012 /locus_tag="Dtpsy_0306" /db_xref="GeneID:7383890" CDS 314333..316012 /locus_tag="Dtpsy_0306" /note="PFAM: ATP dependent DNA ligase domain protein; ATP dependent DNA ligase; KEGG: ajs:Ajs_0311 ATP-dependent DNA ligase" /codon_start=1 /inference="protein motif:PFAM:PF01068" /transl_table=11 /product="ATP dependent DNA ligase" /protein_id="YP_002551790.1" /db_xref="InterPro:IPR000585" /db_xref="InterPro:IPR001241" /db_xref="InterPro:IPR012309" /db_xref="InterPro:IPR012310" /db_xref="InterPro:IPR016059" /db_xref="GI:222109526" /db_xref="GeneID:7383890" /translation="MQAFAALYQALDASTSSLAKQAALRDYLRGAPPEDAAWAVYFLA GGKPRQLVPTKLLRAVAREAAGLPEWLFDESYEAVGDLAETIALLLPPPTQAHALGLA AWMREHLLPLRGLAPDTQAERLGAQWARLAPEERLVYFKLITGAFRVGVSRLQVTQAL AAVSGVDAKRIAQRLMGYTHVGAQPGAADYQRLVAPEGDSAGAQAAEAQGHPYPFFLA HPLQLPVAQFDAALGPPADWIVEWKWDGIRAQLVRRAGATWLWSRGEELVTDRFPELQ ALGDEALPDGTVLDGEIVVWQPARADAPAQPRPFADLQKRIGRKSLGSKLLREVPVVL LAYDLLEEHGQDLRGLPLQARRARLDALLARTDHPALVPSPVLQGQSWAELARLRDSA RALGVEGMMLKRRTAHYGVGRTRDVGIWWKWKIDPMSVDAVLIYAQRGHGRRASLYSD YTFAVWSAPQGTEGRTLVPFAKAYSGLTDAEMARVDAIIRKTTVESFGPVRSVRPTLV FELGFEGIARSARHKSGIAVRFPRMLRWREDKPVDEADSLDTLAALLPATS" gene 316104..319016 /locus_tag="Dtpsy_0307" /db_xref="GeneID:7383891" CDS 316104..319016 /locus_tag="Dtpsy_0307" /note="PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; DEAD/H associated domain protein; SMART: helicase domain protein; DEAD-like helicases; KEGG: ajs:Ajs_0312 DEAD/DEAH box helicase domain-containing protein" /codon_start=1 /inference="protein motif:PFAM:PF08494" /transl_table=11 /product="DEAD/H associated domain protein" /protein_id="YP_002551791.1" /db_xref="InterPro:IPR001650" /db_xref="InterPro:IPR011545" /db_xref="InterPro:IPR013701" /db_xref="InterPro:IPR014001" /db_xref="InterPro:IPR014021" /db_xref="GI:222109527" /db_xref="GeneID:7383891" /translation="MPWLRGATGGAVTAPRFPLATGWLATRGWAPFAFQRQVWRAIAQ GRSGLLHATTGAGKTYAVWLGALQAFADWESKRPVAPVHPAVHAINNEAAPRTAPLTV VWITPMRALAADTLRALAAPLQALAAQHAGLARWSLGARTGDTGSAERSAQARRLPTV LVTTPESLSLLLARADAREQLARVRLVVADEWHELLGNKRGVQVQLALARLAGWNPQL MVWGMSATLGNLPEAMQTLLGREGGTLVRGRVEKRLVVDTLLPERPERFTWAGHLGLA MLPAVVRALEESPGTTLVFVNVRSQAEQWYQALLDARPDWAGQIAIHHGSLDRGVREW VEAGLKSGSLRAVVCTSSLDLGVDFLPVQRVLQIGSAKGVARLLQRAGRSGHAPGRPS RITLVPTHSLELVEAAAARAAVHAERVEKRVSPHQPVDVLVQHLATVALGGGFEPEAL YAEVRRTTAYRTLPRGVWQWCLDFVARGGSALAAYPDYRRVVPDENGVWRLPDARLAR RHRANIGTIVSDASMQVQILQGARLGAVEEGFIARLSPGDCFVFAGQVLELVRTREMT AFVRRAPGRQPTVPRWNGSRMPLSTVLADYVVQQLAQAGRGRYASPELRAVRPLLEVQ RRWSALPTPGTLLAETLHTREGWHLFLYPFAGRHAHIGLASLFAWRAAQGVPGTFSIA VNDYGLELLSATERDWPALLPDLLRTDAAAPQAARQAHGLAPDEALAIRNTANATAPE GVPQERDARAALLHEVLASLNATEMARRRFREIARVAGLIFQSHPGEQRSARQLQASS QLFFEVFRRYDAGNLLLRQADQEVLSQELDVAQLLAALTRMQAQQLMVRPLVRPGPLA FPLMVERFREQLSNEALADRIARMLGDMEAAASARKPVPAPPVQDVVPPDPPRRRRAA PPAAPPRQEASSAVTDALRCTLDFADASEGTGAAPAAARGRSPRRARKPSRPLPRL" gene 319020..319694 /locus_tag="Dtpsy_0308" /db_xref="GeneID:7383892" CDS 319020..319694 /locus_tag="Dtpsy_0308" /note="PFAM: metallophosphoesterase; KEGG: ajs:Ajs_0313 metallophosphoesterase" /codon_start=1 /inference="protein motif:PFAM:PF00149" /transl_table=11 /product="metallophosphoesterase" /protein_id="YP_002551792.1" /db_xref="InterPro:IPR004843" /db_xref="GI:222109528" /db_xref="GeneID:7383892" /translation="MHAPDLPADLAVDLAGTTVWLLPERALWWPEGAMLCLADLHLGK AATFRARGLPVPAGTTQGNLDRLAQLLARHPGVQRLVVLGDFLHAAEAHAPALLRALA AWREDHAALELVLVRGNHDRHAGDPPAWLRARIVEEPWSLGPFACCHHPQHRAGQWVL AGHLHPTAVLYGGGRDALRMPCFVAEPGLLVLPAFGEFTGGHAVPAAPGRQRFAVGAG RVWALP" gene complement(319743..320294) /locus_tag="Dtpsy_0309" /db_xref="GeneID:7383893" CDS complement(319743..320294) /locus_tag="Dtpsy_0309" /note="PFAM: protein of unknown function DUF477; KEGG: ajs:Ajs_0314 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF04536" /transl_table=11 /product="protein of unknown function DUF477" /protein_id="YP_002551793.1" /db_xref="InterPro:IPR007621" /db_xref="GI:222109529" /db_xref="GeneID:7383893" /translation="MVTPSSSPPSGVLARLARLLRHRWSDGGLHQALPPEVLERLGQR VAASERRHTGQIRICVEGGLPLSYLWRGATARERAVTQFGKLRVWDTEHNNGVLIYLM LAEHAIEIVADRALARRVPPATWRSMVSHMAEAFRQGRHEDGLTQALSEVSALLVEHF PATEGVDRPNELPDAPVIPGTVD" gene complement(320320..321228) /locus_tag="Dtpsy_0310" /db_xref="GeneID:7383894" CDS complement(320320..321228) /locus_tag="Dtpsy_0310" /note="PFAM: protein of unknown function DUF477; KEGG: ajs:Ajs_0315 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF04536" /transl_table=11 /product="protein of unknown function DUF477" /protein_id="YP_002551794.1" /db_xref="InterPro:IPR007621" /db_xref="GI:222109530" /db_xref="GeneID:7383894" /translation="MPLALALQALIAIFLVAIGALPATAQPLRAVPALQARVIDQTGT LNDAQRQRLEARLAAIEQQHGSQVVVLMVPTTAPEDIAAFANRVGNAWKIGRKDVGDG VLVVVAKDDRRMRIEVAKALEGAIPDIAAARIIDGAMKPRFREGDFAGGLDAAVQQIG ARIAGENLPAPQSSQQGDGQGRGASAGFDWTDLAVFLFFGVMVAGPVVRRLFGQRLGG LVMGGGAGFLAFIVTSSLLLAGGAGLLALLYTWIFAGRGGPVVWHGGGGGWGGGHGGG WGGGGGGGFGSGGGGDFGGGGASGDW" sig_peptide complement(321151..321228) /locus_tag="Dtpsy_0310" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.988 at residue 26" gene complement(321250..321855) /locus_tag="Dtpsy_0311" /db_xref="GeneID:7383895" CDS complement(321250..321855) /locus_tag="Dtpsy_0311" /note="PFAM: LemA family protein; KEGG: ajs:Ajs_0316 LemA family protein" /codon_start=1 /inference="protein motif:PFAM:PF04011" /transl_table=11 /product="LemA family protein" /protein_id="YP_002551795.1" /db_xref="InterPro:IPR007156" /db_xref="GI:222109531" /db_xref="GeneID:7383895" /translation="MKRLIAMLSAVLALSGCGYNDFQRLDEQSKAAWSEVLNQYQRRA DLVPNIVATVKGEAAFEQETLTKVIEARAKATSIQVTPETLNNPEAFNKFQQAQGELS SALSRLMVVAERYPQLQANQAFRDLRVTLEGTENRITVARNRYIQTVQEYNVLARSFP TNLTAMVFGYEPKPSFTVANEAEISAPPQVDFSSPAPASKP" sig_peptide complement(321793..321855) /locus_tag="Dtpsy_0311" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.925) with cleavage site probability 0.584 at residue 21" gene 322000..322449 /locus_tag="Dtpsy_0312" /db_xref="GeneID:7383896" CDS 322000..322449 /locus_tag="Dtpsy_0312" /note="KEGG: ajs:Ajs_0317 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0317" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551796.1" /db_xref="GI:222109532" /db_xref="GeneID:7383896" /translation="MPRTPLRAAALAGSPDDLEAAFYDALQAGDVERVMACWADEDDI VCVHPGAARHVGPAAIRAAFATLLQQGGLNVHPAQVMRVQALASAVHSVLEHVRVMLP DGPREAVVQATNVYHKTPQGWRLVAHHASAAGMHEAEGAAPAGHLLH" gene 322522..323526 /locus_tag="Dtpsy_0313" /db_xref="GeneID:7383897" CDS 322522..323526 /locus_tag="Dtpsy_0313" /note="KEGG: ajs:Ajs_0318 alpha/beta hydrolase fold" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0318" /transl_table=11 /product="alpha/beta hydrolase fold protein" /protein_id="YP_002551797.1" /db_xref="GI:222109533" /db_xref="GeneID:7383897" /translation="MKYEAPWWLPGGHAQTIWPALWARRTLGPPPAYVRERWLAPDGD FVDVDFLRPCAAAGAAPAPLLVLFHGLEGSSRSHYAQAFAGVARERGWGFAVPHFRGC SGEINRAPRAYHSGDHEEIDWILRRLAGLQRTGGGARAPLLAVGVSLGGNALMRWAGE QGGSALASADAIASVCAPLDLAAGGHAIGRGFNRQVYTRMFLRTMVPKALAKLAQYPG LFDRAALLAARDLHAFDDIFTAPLHGFRDADDYWRRASAKPLLPAVRVPALLVNARND PFVPGASLPRDGEVAPVVTLWQPAHGGHVGFAQGGWPGHVRALPEAVAAWLADHAALG " gene 323567..324106 /locus_tag="Dtpsy_0314" /db_xref="GeneID:7383898" CDS 323567..324106 /locus_tag="Dtpsy_0314" /note="KEGG: ajs:Ajs_0319 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0319" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551798.1" /db_xref="GI:222109534" /db_xref="GeneID:7383898" /translation="MDDIVKQAIAKWPNVPACYGWLGLDARGHWYLRDDAVQLQGGFA VARGTRLEHAKLIEFIHRNYEADGEGRWFFQNGPQRVYVELEATPLIWRLGADGEPVA HTGRPAGRANECLVDEAGRVYLACTAGLGLVHSLDVEALARQIDQGRWTPREVLAADL PGAYGFVPSPQAVAGPLPA" gene complement(324183..324722) /locus_tag="Dtpsy_0315" /db_xref="GeneID:7383899" CDS complement(324183..324722) /locus_tag="Dtpsy_0315" /note="PFAM: cytochrome c class I; KEGG: ajs:Ajs_0320 cytochrome c, class I" /codon_start=1 /inference="protein motif:PFAM:PF00034" /transl_table=11 /product="cytochrome c class I" /protein_id="YP_002551799.1" /db_xref="InterPro:IPR002323" /db_xref="InterPro:IPR003088" /db_xref="InterPro:IPR009056" /db_xref="GI:222109535" /db_xref="GeneID:7383899" /translation="MSDTHDEAHTGPIKNPKQLLVTVIFAFVLPVFAIIGLVLFVTAD KKPAAGSANPELAVAQRIQKIGNVEVRDANRPLRTGEAVFQGQCAACHATGAAGAPKL GDAAAWAPRIATGFEALVQSALKGKGAMAPQGGGDFDDTEIARGVAYMANAAGAKFEE PNRPGAEGGAAAASAPASN" gene complement(324843..326288) /locus_tag="Dtpsy_0316" /db_xref="GeneID:7383900" CDS complement(324843..326288) /locus_tag="Dtpsy_0316" /note="TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: ajs:Ajs_0321 RND efflux system outer membrane lipoprotein" /codon_start=1 /inference="protein motif:TFAM:TIGR01845" /transl_table=11 /product="RND efflux system, outer membrane lipoprotein, NodT family" /protein_id="YP_002551800.1" /db_xref="InterPro:IPR003423" /db_xref="InterPro:IPR006162" /db_xref="InterPro:IPR010131" /db_xref="GI:222109536" /db_xref="GeneID:7383900" /translation="MQSHTLNRARPARALSPLLAAALVAGCSFIPTYERPAAPVPQAY PLAGAESTTSARAAADIDWKEYFTDPRLQRLIGMALGNNRDLRVAMLNVEQARAQFQI QRANQFPTVNAIASGTRQPSATTGSYANQFQVGLGISAWEIDFFGRVAALKEQALAQY LATDEARKSAQISLVAAVASGWLTLMADEELLDISRRTLETRDESVKLTRLRLENGVS SELDNRQAESLAQAARATYAQQQRQRMLDENALVLLLGQPLPDDIRASLPSSRLADAT PMQALPAGLPSDLLVRRPDVRMAEQQLIGANANIGAARAAFFPRISLTAQFGTVSDEL SGLFKSGSWAFSLAPQLALPIFDAGRNQAGLESARAGREIAVAQYEKSIQTAFREVSD ALAGQATLQEQVDAQRAQAQADAKRFELSDLRYRNGVASYLDLLDAQRSLFATQQSLV VTRLQQLQNQVTLYKVLGGGWTAPAEETPRS" sig_peptide complement(326184..326288) /locus_tag="Dtpsy_0316" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.615) with cleavage site probability 0.356 at residue 35" gene complement(326313..329459) /locus_tag="Dtpsy_0317" /db_xref="GeneID:7383901" CDS complement(326313..329459) /locus_tag="Dtpsy_0317" /note="TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: aav:Aave_0388 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family" /codon_start=1 /inference="protein motif:TFAM:TIGR00915" /transl_table=11 /product="transporter, hydrophobe/amphiphile efflux-1 (HAE1) family" /protein_id="YP_002551801.1" /db_xref="InterPro:IPR001036" /db_xref="InterPro:IPR004764" /db_xref="GI:222109537" /db_xref="GeneID:7383901" /translation="MAKFFIERPIFAWVIAIFIMVIGAVSITQLPVAQYPTVAPPTIQ VTVAYPGATAQTLEDNVLSVIEREMNGATGLAYMETTSQANGTGTIVLSFEPGTNDDL AQVDVQNRLSRATPRLPAAVTQQGVRVEKSRSNFLLFSILTSDNPDINIDALNDYAAR NVVPELQRLPGVGGVTQFGSERAMRIWIDPAKLKGFNLSLDQVNASIRAQNVQVSAGN LGELPSPAGQTISATIVVKGQLSTPEEFGNVILRANTDGSTVRLKDVARIELGAQTYN FSGRLNGSPSVGMGVQLTSSANALATADAVKSKLAELQRYFPQGVAYTIPYDTSTFIS VSIEKVVYTLLEAIGLVFLVMFLFLQNFRYTIIPTIVVPVALLGTFGALLAMGFSINV LTMFGMVLVIGIVVDDAIVVVENVERIMAEEGLPPLQATRKAMGQISSAVIGMTVVLV SVFVPLAFFAGSTGNIYRQFAVTMATSIAFSAFLALSLTPALCATLLKPVTEGHHDKT GFFGWFNRSFKHATHSYESFLARLVRRSGRMMIIYAVLLGAVAVVYMRLPTSFLPNED QGFLISNVQLPPGASQERTRAALTKVEEFMLKQPEVRDIVTVSGFSFSGQGQNAGLAF ITLKDWSERPGPDQTAQAVAGRAMGALGGFRDAFIFTLSPPPIPELGSASGFTFRLQD RGSKGHDALLAARNQLLGMASQSKVLAAVRPDGMEDAPQMQIDIDRDKANALGVSYDR IASALATALGSTYVNDFPNQGRLQRVVVQADGFARMQPESVLDIPILNDKGQVLPLST FASTRWITGAMQTVRYNGYPSMKIAGDAAPGYSTGDAMAEMERLASQLPEGFSFEWTG QSREEKLAGSQALVLYAFALLAVFLCLAALYESWSIPFSVMLVVPLGVLGVVLGVLLR GMANDVYFQIGLVTIIGLSAKNAILIVEFAKDLQAQGKNIIEAALEAAHLRFRPIVMT SLAFTLGVVPLYLASGASSASQRAIGTGVVGGMITGTLLAVVFVPVFFVVVRSFFKGS RRQQEHDAQQALQHRGEA" gene complement(329478..330788) /locus_tag="Dtpsy_0318" /db_xref="GeneID:7383902" CDS complement(329478..330788) /locus_tag="Dtpsy_0318" /note="TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: ajs:Ajs_0323 RND family efflux transporter MFP subunit" /codon_start=1 /inference="protein motif:TFAM:TIGR01730" /transl_table=11 /product="efflux transporter, RND family, MFP subunit" /protein_id="YP_002551802.1" /db_xref="InterPro:IPR006143" /db_xref="GI:222109538" /db_xref="GeneID:7383902" /translation="MPRLNNATARAIRPFQRTPVPAALAVALAAALALGACGQKSDAP AAGASPRAPEVGVVTVQPGDIGLVTELPGRLEASRVAEVRARAAGILQKRLFREGSDV KAGQQLFLIDSAPYQASVAQAEASVAQAEASLAQSRALAERYRPLVAVNAISKQEYDN AVAAQKTAEANVAAAKAALTTSRINLGYATVTAPISGRIGRALVTEGALVGQGTPTEL AVIQQIDPLYINFTQSASEAIKLKAAMASGKYKQSSANAANVRVVLEDGSVYPQAGRL LFTDLTVDATSGQVTLRAEVPNSDRSLLPGLYVRVRLEQAQVDNGILLPQQAVTRSGK ADTVLVVGADNHVTPRVVKLGPAQGAHWVVLEGLKSGEQVMVDGFQKLPRGKPGDPIV VKPVAWQAAGAAQQPAAAPASAPAAPATPASAASSQPAPAAAKQ" sig_peptide complement(330672..330788) /locus_tag="Dtpsy_0318" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.997) with cleavage site probability 0.546 at residue 39" gene 330960..331580 /locus_tag="Dtpsy_0319" /db_xref="GeneID:7383903" CDS 330960..331580 /locus_tag="Dtpsy_0319" /note="PFAM: regulatory protein TetR; Tetracycline transcriptional repressor MAATS-type domain protein; KEGG: ajs:Ajs_0324 TetR family transcriptional regulator" /codon_start=1 /inference="protein motif:PFAM:PF00440" /transl_table=11 /product="transcriptional regulator, TetR family" /protein_id="YP_002551803.1" /db_xref="InterPro:IPR001647" /db_xref="InterPro:IPR013572" /db_xref="GI:222109539" /db_xref="GeneID:7383903" /translation="MARRTKEDADATRNSLLDAAERVFYEKGVSRASLSDIAQAAGAT RGAIYWHFKDKVALFNAMMDRVTHPLEQVGSKSASMATLPPLERLRSMVDFVQRTIVQ DERTRRVFEIALYRVEYVNDLAAVRDNHIEGCADFCALIEGELRSAAEDQNLQLPMEP HTAAMGVQALFDGLLQSWLLTHGRFDLVTVSRGAIDAYLRGLGFRL" gene 331635..331710 /locus_tag="Dtpsy_R0001" /note="tRNA-Arg1" /db_xref="GeneID:7383904" tRNA 331635..331710 /locus_tag="Dtpsy_R0001" /product="tRNA-Arg" /db_xref="GeneID:7383904" gene 331879..332208 /locus_tag="Dtpsy_0320" /db_xref="GeneID:7383665" CDS 331879..332208 /locus_tag="Dtpsy_0320" /note="KEGG: ajs:Ajs_0331 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0331" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551804.1" /db_xref="GI:222109540" /db_xref="GeneID:7383665" /translation="MANTNQGNQNQGNRNQSQGSRDNNQGQSGSGRGFASMDPDRQRE IAAEGGRAAHASGNAHEFTSQEARAAGAKSHGGGGNNASSGSGNTRGSSSEQQARAGS QSHKNDR" gene 332421..332882 /locus_tag="Dtpsy_0321" /db_xref="GeneID:7385329" CDS 332421..332882 /locus_tag="Dtpsy_0321" /note="KEGG: ajs:Ajs_0332 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0332" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551805.1" /db_xref="GI:222109541" /db_xref="GeneID:7385329" /translation="MTTSTPHPWGTNLQKAQTFQPDWDSYVVTKVKHVRAALLSGIDT FSAEGFTVPMATGFIELTGMRAGSFRTFLKIGFSESNRVMLPTFQLVDNAAVGTLILP SPCFGSALQFVNSPMAHFRIGGDGRRNALATDVTLLNSALIEAGEPEGMEI" gene 332946..334109 /locus_tag="Dtpsy_0322" /db_xref="GeneID:7385330" CDS 332946..334109 /locus_tag="Dtpsy_0322" /note="PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: nmu:Nmul_A2149 zinc-containing alcohol dehydrogenase superfamily protein" /codon_start=1 /inference="protein motif:PFAM:PF08240" /transl_table=11 /product="Alcohol dehydrogenase GroES domain protein" /protein_id="YP_002551806.1" /db_xref="InterPro:IPR002328" /db_xref="InterPro:IPR013149" /db_xref="InterPro:IPR013154" /db_xref="GI:222109542" /db_xref="GeneID:7385330" /translation="MKALTYQGAKDVRVENVPDPVLLAQDDVLLRVTATAICGSDLHI YRGKIPGMKDGDILGHEFMGIVEEVGPAVTALRPGDRVVVPFVIACGSCFYCDKTLFA ACENTNPGRGAILNKKNATAGAGLFGYSHLYGGYPGGQAEYVRVPHGNVGPLKVPQVL SDEQVLFLSDILPTGYQAAVNAQIGAGSSVAIFGAGPVGLMSALAARFLGAEQVFMVD HNEYRLQFAQATYGVVPINFDKDEDPAETILSATGGHGVDATIDAVGFEAKGSALETA LTAVRLEGSSGKALRQCIAATRRGGVLSVPGVYAGFIHGFLFGDAFEKGLTFRMGQTH AQKYMPQLLEHIANGRMRPEVIISHRMKLADAARGYEIFEKKEEECRKVVLTP" gene complement(334242..334751) /locus_tag="Dtpsy_0323" /db_xref="GeneID:7385331" CDS complement(334242..334751) /locus_tag="Dtpsy_0323" /note="KEGG: ajs:Ajs_0334 putative outer membrane protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0334" /transl_table=11 /product="putative outer membrane protein" /protein_id="YP_002551807.1" /db_xref="GI:222109543" /db_xref="GeneID:7385331" /translation="MPKICTARLVTAACGLVLAAAAHADASTKDREFLTQAATGGLYE VQAGKLAQNRATANEVKSFGAMLVKDHTAANDELRALAARKGVALPTTLPGDKQKQLD QLAKAQKFDQEFLSQVGLNDHRRDIALFEAAGKDADDPEIQTFALKALPKLKAHKDHA EDLAVSIKR" sig_peptide complement(334677..334751) /locus_tag="Dtpsy_0323" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.981 at residue 25" gene complement(334878..335645) /locus_tag="Dtpsy_0324" /db_xref="GeneID:7385332" CDS complement(334878..335645) /locus_tag="Dtpsy_0324" /note="PFAM: glutamine amidotransferase class-II; KEGG: ajs:Ajs_0335 glutamine amidotransferase, class-II" /codon_start=1 /inference="protein motif:PFAM:PF00310" /transl_table=11 /product="glutamine amidotransferase class-II" /protein_id="YP_002551808.1" /db_xref="InterPro:IPR000583" /db_xref="GI:222109544" /db_xref="GeneID:7385332" /translation="MCQLLGMNANTPTDVTFSFTGFAQRAGNTADHTDGWGIAFFEGR GLRHFVDHERATDSPVAELIRRYPIKSRNVIAHIRKATQGVVSLENCHPFVRELWGRY WVFAHNGDLKDFRPRLHAHFHPVGTTDSEHVFCWLMQELSKSHAGMPSIEELTLTLRE LAARIAPHGTFNFLLSNGQALWAHASTHLYYIERRHPFSQAQLCDEDLRVDFSAHTTP HDKVAVVVTAPLTSNEQWTAFQSGEMRVFVDGQCQAA" gene complement(335679..335867) /locus_tag="Dtpsy_0325" /db_xref="GeneID:7385333" CDS complement(335679..335867) /locus_tag="Dtpsy_0325" /note="TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-oxalocrotonate tautomerase; KEGG: ajs:Ajs_0336 4-oxalocrotonate tautomerase" /codon_start=1 /inference="protein motif:TFAM:TIGR00013" /transl_table=11 /product="4-oxalocrotonate tautomerase family enzyme" /protein_id="YP_002551809.1" /db_xref="InterPro:IPR004370" /db_xref="GI:222109545" /db_xref="GeneID:7385333" /translation="MPTYHIEMMEGRTVEQKRKLVEEITRVSVEILGGSPESVDILIT DVKRENWATGGKLWLDRQ" gene complement(335891..336127) /locus_tag="Dtpsy_0326" /db_xref="GeneID:7385334" CDS complement(335891..336127) /locus_tag="Dtpsy_0326" /note="KEGG: ajs:Ajs_0337 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0337" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551810.1" /db_xref="GI:222109546" /db_xref="GeneID:7385334" /translation="MPTAAPTTTHCPLCGQSNGCAVAAGLPAQQCWCMHESVSRDALA RLPAEARGRACICPLCAREEPAAPQAPAPVVPNP" gene complement(336235..338436) /locus_tag="Dtpsy_0327" /db_xref="GeneID:7385335" CDS complement(336235..338436) /locus_tag="Dtpsy_0327" /EC_number="2.3.3.9" /note="KEGG: ajs:Ajs_0338 malate synthase G; TIGRFAM: malate synthase G; PFAM: malate synthase" /codon_start=1 /inference="protein motif:TFAM:TIGR01345" /transl_table=11 /product="malate synthase G" /protein_id="YP_002551811.1" /db_xref="InterPro:IPR001465" /db_xref="InterPro:IPR006253" /db_xref="GI:222109547" /db_xref="GeneID:7385335" /translation="MTARTHVHGLQVANELHAFINEQVLPGTGVEPAAFWKGFDALVA DLAPKNAALLAERDRLQKELDTWHKANPGPIQDMAGYRAFLSQIGYLVEPPKGAQATT TNVDAELAIQAGPQLVVPILNARYALNAANARWGSLYDALYGTDVIGEEGGAEKGKGY NPVRGAKVIAFARDFLDQAAPLASGSHKDATAYRVEGGTLAVTLQGGATTGLKNAAQF VGYQGNAAEPSSVLLVNNGLHIDIRVDRNTPIGKGDAAGVADVVVEAALSTILDLEDS VAAVDAEDKVLGYSNWLGILKGTLTDTFDKGGKQVTRGLNPDREYNGADGKPVKLHGR SLMFVRNVGHLMTNPAILWGAEGKEIPEGILDAMVTTAIAIHDLKGGAGGIRNSRTGS VYIVKPKMHGPAEVAFANELFGRVEQVLGLPANTVKLGIMDEERRTSVNLKACIAAAP ARVAFINTGFLDRTGDEMHTAMQAGPMIRKGDMKSSAWIQAYERNNVLVGLSMGLSGR AQIGKGMWAAPDLMKAMLEQKIAHPKAGANTAWVPNPTGATLHTLHYHQVNVAAVQAE LLKVDADAERDNLLTGLLTVPVSSNPHWSETEKQQELDNNIQGILGYVVRWIDQGVGC SKVPDINDIGLMEDRATLRISSQHVANWLLHGVVTEGQVRATFERMAAKVDQQNGGDP LYQRMHGRFAESMAYQAACDLVFKGVEQPSGYTEPLLHAWRQKVKAAQKKA" gene 338663..339601 /locus_tag="Dtpsy_0328" /db_xref="GeneID:7385336" CDS 338663..339601 /locus_tag="Dtpsy_0328" /note="PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_0339 LysR family transcriptional regulator" /codon_start=1 /inference="protein motif:PFAM:PF03466" /transl_table=11 /product="transcriptional regulator, LysR family" /protein_id="YP_002551812.1" /db_xref="InterPro:IPR000847" /db_xref="InterPro:IPR005119" /db_xref="GI:222109548" /db_xref="GeneID:7385336" /translation="MDKLKAFESFVSVATRGSLTAAAKAEGVAPAIMGRRLDALEEHL GVKLLVRTTRRITLTHEGSAFLEDCQRLLSDVANAEASVSAGGVKATGHLRVTAPAGF GRRHVAPLVPRFHDLHPEVTLSLNLSDRVVDLAGEGYDCAVRVGDLPDSSLVSVRMAD NRRLCVATPQYLQRRGTPTHPGELAQHDCLTLSSDASQTRGWAFRVPVAGGGGATEVV HFKPGGPLDCSDGQVLHDWCLGGWGIAWRSTWEVESEIAAGRLVAVLEEFAAPPNGIY VVFPQRKHLPLRVRLWIEYLKHHYAQPEFWARPASV" gene 339693..340277 /locus_tag="Dtpsy_0329" /db_xref="GeneID:7385337" CDS 339693..340277 /locus_tag="Dtpsy_0329" /note="KEGG: ajs:Ajs_0340 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0340" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551813.1" /db_xref="GI:222109549" /db_xref="GeneID:7385337" /translation="MRIPILSVLPALPAARWMLAVMALALVAGCALPARHAETTPRAH GVPAGMVSVTYADPAGFAEAREQTPHEPAAARRAWMDALCEHLAERVAAALPEGERAE VHITDVRRAGAFEPVARATAQAVRVVRDVHPPRIALEFKRLSPDGRTLAEGSRTLPGL AFQMRGDRYPGDKLRHEKTLIDDWVAQEFSARRP" sig_peptide 339693..339806 /locus_tag="Dtpsy_0329" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.997) with cleavage site probability 0.887 at residue 38" gene 340317..340772 /locus_tag="Dtpsy_0330" /db_xref="GeneID:7385338" CDS 340317..340772 /locus_tag="Dtpsy_0330" /note="KEGG: ajs:Ajs_0341 putative transmembrane protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0341" /transl_table=11 /product="putative transmembrane protein" /protein_id="YP_002551814.1" /db_xref="GI:222109550" /db_xref="GeneID:7385338" /translation="MTTEALLAYAHIMAFLMAATFLASETALCRKEWMNAAAVERLAR VDMLYGISALLVLATGLARTWWGIKGGAWYWSQPLLHAKVTLFVVIGLMSIVPTMRFL RWRRAVRAGGALPSDDQVRSTRRLVMIEAHLLALIPLLAVFLARGVGTR" gene complement(340873..341205) /locus_tag="Dtpsy_0331" /db_xref="GeneID:7385339" CDS complement(340873..341205) /locus_tag="Dtpsy_0331" /note="PFAM: PsiF repeat protein; KEGG: ajs:Ajs_0342 PsiF repeat-containing protein" /codon_start=1 /inference="protein motif:PFAM:PF07769" /transl_table=11 /product="PsiF repeat protein" /protein_id="YP_002551815.1" /db_xref="InterPro:IPR011690" /db_xref="GI:222109551" /db_xref="GeneID:7385339" /translation="MKKLLPLLAAAGFALSFAAHAADAPAAGASAPAKAPTAQQTRMK TCNADAGAKNLKGDERKAFMKECLSGNKASTQQDKMKSCNADAGAKNLKGDARKAFMK ECLSGAAS" sig_peptide complement(341140..341205) /locus_tag="Dtpsy_0331" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 1.000 at residue 22" gene 341331..343034 /locus_tag="Dtpsy_0332" /db_xref="GeneID:7385340" CDS 341331..343034 /locus_tag="Dtpsy_0332" /EC_number="6.1.1.19" /note="KEGG: ajs:Ajs_0343 arginyl-tRNA synthetase; TIGRFAM: arginyl-tRNA synthetase" /codon_start=1 /inference="protein motif:TFAM:TIGR00456" /transl_table=11 /product="arginyl-tRNA synthetase" /protein_id="YP_002551816.1" /db_xref="InterPro:IPR001278" /db_xref="InterPro:IPR001412" /db_xref="InterPro:IPR005148" /db_xref="InterPro:IPR008909" /db_xref="InterPro:IPR015945" /db_xref="GI:222109552" /db_xref="GeneID:7385340" /translation="MLSVKQELLAALADELEKVSPGAGSRAAFESPKVAAHGDLACTA AMQLAKPLKQNPRALGEQLQAALEATPAFQKWVQAIEIAGPGFLNIRLKPAAKQQVVR EVLAQGAQYGYQPARGEKVLVEFVSANPTGPLHVGHGRQAAIGDAISHLYATQGWSVH REFYYNDAGVQIDTLTKSTQLRAKGFKPGDDCWPTDSENPLAKNFYNGDYIQDIADAF LAKATVQADDRAFTANGDVEDYENIRQFAVAYLRNEQDKDLQAFNLQFDQYYLESSLY ANGHVDATVQRLVANGKTYEQDGALWLKSTDYGDDKDRVMRKQDGTYTYFVPDVAYHI QKFQRGFTKVVNIQGTDHHGTIARVRAGLQAADVGIPQGYPDYVLHTMVRVVRNGEEV KISKRAGSYVTLRDLIEWTSKDAVRFFLLSRKPDTEYTFDVDLAVAQNNDNPVYYVQY AHARICSVLRGWREDYDVAALRDVDLSPLEGPQAQALMLLLAKYPEMLTAAAAGNAPH DVTFYLRDLAAAYHSYYDAERILVDDEAVKQARLALVAATAQVLHNGLAVLGVSAPAR M" gene 343047..343673 /locus_tag="Dtpsy_0333" /db_xref="GeneID:7385341" CDS 343047..343673 /locus_tag="Dtpsy_0333" /note="PFAM: Sporulation domain protein; KEGG: ajs:Ajs_0344 sporulation domain-containing protein" /codon_start=1 /inference="protein motif:PFAM:PF05036" /transl_table=11 /product="Sporulation domain protein" /protein_id="YP_002551817.1" /db_xref="InterPro:IPR007730" /db_xref="GI:222109553" /db_xref="GeneID:7385341" /translation="MKKQQRGGTIVGFILGVIVGLGAALAVAVYVTKVPVPFLNKSTP RASEQDEATKNKNWDPNAPLYGKNPVRPAAPAAAPASDTATAAAQPASGPRAAASRPG AAPTSADPLGDLARAKANAAPAPTTSADPFEYFVQAGAFRTQQDADAQRAKLAMLGWE ARVSEREQNGRTVFRVRVGPFGKRDDAESLKEKLDGAGVESALVRVQR" sig_peptide 343047..343127 /locus_tag="Dtpsy_0333" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.990) with cleavage site probability 0.686 at residue 27" gene 343732..344382 /locus_tag="Dtpsy_0334" /db_xref="GeneID:7385342" CDS 343732..344382 /locus_tag="Dtpsy_0334" /note="PFAM: DSBA oxidoreductase; KEGG: ajs:Ajs_0345 DsbA oxidoreductase" /codon_start=1 /inference="protein motif:PFAM:PF01323" /transl_table=11 /product="DSBA oxidoreductase" /protein_id="YP_002551818.1" /db_xref="InterPro:IPR001853" /db_xref="GI:222109554" /db_xref="GeneID:7385342" /translation="MKRREFSLTVASAATALSLPLAAPALAQGRQFKEGKDYVKLGKP VATEAPAGKIEVIEFFWYSCPHCNTFEPSLEAWIKSAPKDLHIRRVPVAFNASFVPQQ KLYYALEGMGKLPELHAKVFRAVHVERLPLNKDELIFDWIGKQGVDVAKFKEVYNSFT VSNQVRKASQLQDGYQVEGVPSMGVAGRYYTDGTMAGNMQSVLQVVEHLVGVARKG" sig_peptide 343732..343815 /locus_tag="Dtpsy_0334" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.995 at residue 28" gene 344532..345215 /locus_tag="Dtpsy_0335" /db_xref="GeneID:7385343" CDS 344532..345215 /locus_tag="Dtpsy_0335" /note="TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; PFAM: OstA family protein; KEGG: ajs:Ajs_0346 OstA family protein" /codon_start=1 /inference="protein motif:TFAM:TIGR03002" /transl_table=11 /product="lipopolysaccharide transport periplasmic protein LptA" /protein_id="YP_002551819.1" /db_xref="InterPro:IPR005653" /db_xref="InterPro:IPR014340" /db_xref="GI:222109555" /db_xref="GeneID:7385343" /translation="MIARFVPSMRTRLPFLLLSRAAALALALAASPLVHAEKADRNKP MNIEADALRHDELKQTSVFTGRVVMTKGTIVLRGAQLEVRQDADGFQYGVVTAEPGKR AFFRQKRDTAPGAPDEFVEGEGEVIEYDGRADVVKLIRRAELRRYREATLTDELAGAL IVYNNLTDVFTVDGQKTAPAGATAGTPGGRVRAVLAPKEPASGTSATPPVRTEPPALR TSPSLDGAK" sig_peptide 344532..344642 /locus_tag="Dtpsy_0335" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.995 at residue 37" gene 345239..345991 /locus_tag="Dtpsy_0336" /db_xref="GeneID:7385344" CDS 345239..345991 /locus_tag="Dtpsy_0336" /note="PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_0347 ABC transporter related" /codon_start=1 /inference="protein motif:PFAM:PF00005" /transl_table=11 /product="ABC transporter related" /protein_id="YP_002551820.1" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR017871" /db_xref="GI:222109556" /db_xref="GeneID:7385344" /translation="MSEGVSRLEALHLEKSYGSRKVVKDVSVVVQKGEVVGLLGPNGA GKTTSFYMIVGLVRSDGGRISIDGQDVTDMPIHRRSRLGLSYLPQEASIFRKLNVEDN VRAVLELQTDEAGRSLPRAEVERRLTALLQELRVDHLRKSPALALSGGERRRVEIARA LATQPRFILLDEPFAGIDPIAVIEIQRIIGFLKARGIGVLITDHNVRETLGICDHAFI ISDGQVLAQGTPSDIVDNAEVRRVYLGEHFRM" gene 346044..347621 /locus_tag="Dtpsy_0337" /db_xref="GeneID:7385345" CDS 346044..347621 /locus_tag="Dtpsy_0337" /note="TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor; sigma-54 factor core-binding region; sigma-54 DNA-binding domain protein; KEGG: ajs:Ajs_0348 RNA polymerase, sigma 54 subunit, RpoN" /codon_start=1 /inference="protein motif:TFAM:TIGR02395" /transl_table=11 /product="RNA polymerase, sigma 54 subunit, RpoN" /protein_id="YP_002551821.1" /db_xref="InterPro:IPR000394" /db_xref="InterPro:IPR007046" /db_xref="InterPro:IPR007634" /db_xref="GI:222109557" /db_xref="GeneID:7385345" /translation="MKPGLSLRVSQHLALTPQLQQSIRLLQLSTLELAQEVEQMLDEN PFLERTLEEAPREEFGLAQADAPVSEQDREAEDAIYSGAVSAGQESATSQNDAETSSA ESTAEPADWEGDGSVDLAPDDSEWGGDAPARNGAGAGSDDEVDATELARSQESLTAFL HRQALALRLSELDMAALRFLIESLNDDGYLDESLQDLAASLAGTEDPEQLDELVHRFT VALRLLQSLEPAGVGARGLAECLTLQLRAMDQDEEGDPDVIQAALAICGQPLDLLAKR DVRRLAQACGTSEERTRAAMALIARLEPRPGRRFADVDRNIIVPDVIVKKTGRGGQQN FSVQLNPDVMPRLRVHDIYAGALRGGRGEGHQALQARLQEARWFIKNIQQRFDTILRV SRAIVERQKNFFVHGELAMRPLVLRDIADELGLHESTISRVTTAKYMATPQGTYELKY FFGSGLGTETGGNASSTAVRALIKQFIAAENPHKPLSDSQIAEMLKEQGIECARRTVA KYREALKIAPANLRKAL" gene 347625..348068 /locus_tag="Dtpsy_0338" /db_xref="GeneID:7385346" CDS 347625..348068 /locus_tag="Dtpsy_0338" /note="KEGG: ajs:Ajs_0349 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0349" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551822.1" /db_xref="GI:222109558" /db_xref="GeneID:7385346" /translation="MARVVFDLPPHFGFSTELQIYISHVNQGGHLDNAQLLSLVSEAR VRFFKSLGYPEADVAGLSTVVGDIVAQYKSEAFHGETLRVEMTPQDFNRYGFDLVFRL TEKSQGREIARGKTGIVFIDRAARKPAPIPESVLQPLLQRAAQPQ" gene 348065..349378 /locus_tag="Dtpsy_0339" /db_xref="GeneID:7385347" CDS 348065..349378 /locus_tag="Dtpsy_0339" /note="PFAM: putative RNA methylase; THUMP domain protein; KEGG: ajs:Ajs_0350 putative RNA methylase" /codon_start=1 /inference="protein motif:PFAM:PF01170" /transl_table=11 /product="putative RNA methylase" /protein_id="YP_002551823.1" /db_xref="InterPro:IPR000241" /db_xref="InterPro:IPR002052" /db_xref="InterPro:IPR004114" /db_xref="GI:222109559" /db_xref="GeneID:7385347" /translation="MNQLQLFLPCAAGVEGYLADEVHSLTGLAGQDLLVGRAGVLLRA SWRDALRLNLHSRLAQRVLVQLAERPYRNEDDIYAAAADVAWEIWFTPRQSFKVEVTA QHSPLKSLNFAALRVKDAVADRFRAKAGVRPDVQTQWPDVRVHLHLTSDRAQIYIDTS GEPLFKRGWREDKGDAPLKETLAAAMIAATGWDPHGEQPLPLYDPCCGSGTVVIEAAQ IACRIAPGLQRRFAFEKLLPHQAHVWSAIKDEAASAVTAASVPIFGSDVSHRMVDFAQ RNAVRAGVADAVQLRGGDALQRMPPSEQPGVMLLNPPYGERIAAAGTAGRNARERMST VERMGRETAQTEDGVDFFAQLAAHWKKHYAGWQAWMLTPDLKLPSKMRLKESRRVPLW NGPIECRLFRFDLVAGAVRDRPRASHTGEGGAASGAPAGGASDAS" gene 349368..349853 /locus_tag="Dtpsy_0340" /db_xref="GeneID:7385348" CDS 349368..349853 /locus_tag="Dtpsy_0340" /note="KEGG: ajs:Ajs_0351 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0351" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551824.1" /db_xref="InterPro:IPR002850" /db_xref="GI:222109560" /db_xref="GeneID:7385348" /translation="MRPELRLPAVAPAGESARVVVLDTNIVLDLFIFADAAVAAVRAL LQAQRLDWIATQHMRDELERVLQYTHLQPRMAYYGVGADDVLTAFDAGVRLVEVAPRA PWACKDADDQKFIDLAVAHRAIIVSKDKAVLCMRKRLLTQDTHAVAAIVFEEVCEPCP T" gene 349841..351142 /locus_tag="Dtpsy_0341" /db_xref="GeneID:7385349" CDS 349841..351142 /locus_tag="Dtpsy_0341" /note="PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); KEGG: ajs:Ajs_0352 UDP-N-acetylglucosamine 1-carboxyvinyltransferase" /codon_start=1 /inference="protein motif:PFAM:PF00275" /transl_table=11 /product="EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)" /protein_id="YP_002551825.1" /db_xref="InterPro:IPR001986" /db_xref="GI:222109561" /db_xref="GeneID:7385349" /translation="MSNLIVHGGTPLRGRVTPSANKNAVLPVLCATLLTRAPLRLVGV PDITDVRKILEIFRTLGSEVRWDHASATLELHHQATHFDAATHRLPEEMRSSIMLVPP LLARFGVARLEDNVKGCTLGVREIDPHVEVFRSFGGQVERAEGSLLVRRVGMLTPVHH WLDYASVTTTENFVLCAVAAQGTSTLTNAASEPHVQEFCRFMQMLGAQIEGVGTSRLT VHGGGDLGGGEFRFAEDFHEITTFLALGAITGGDVVVKNSAPENFPLIDRTFAKFGVR VEHRDGWSRAFVDGPLTVQTPFTPNVLTKVEAAPWPYFPVDLLPIFIALGVRAQGNAM FWNKVYDGALGWTGELSKFGAHVYQSDPHRIVTFGGGPLAPAVVESPYIIRVAIALFM VAASIPGRSEIRNATPIRRAHPHFVENLRSLGARVEWTAEE" gene 351624..352454 /locus_tag="Dtpsy_0342" /db_xref="GeneID:7385350" CDS 351624..352454 /locus_tag="Dtpsy_0342" /note="PFAM: SEC-C motif domain protein; KEGG: ajs:Ajs_0353 SecC motif-containing protein" /codon_start=1 /inference="protein motif:PFAM:PF02810" /transl_table=11 /product="SEC-C motif domain protein" /protein_id="YP_002551826.1" /db_xref="InterPro:IPR004027" /db_xref="GI:222109562" /db_xref="GeneID:7385350" /translation="MNATSDTPASAAAPALGPDELDELDSLLDDLRTREEDVPQWEFC DGFLTALVCTRRPVPAAEWLPMLLGDGLELDVAEGEPLPLVPTFKDLAQQERFLALWE LRRAEVQAQLDEQAESLDADNAFQPEVIDMRGAIASLPEEERAEMAGQEIPSFGQVWA LGFMFAVENWPEDWATPRDKEAAQWLDGALESIVALTEDDTGKPEICMYAEDGPPSTS QERLEVFGEAIWGVYDLRQLWRSLGPRQETIVKGEQPGRNDPCPCGSGKKYKKCCGAA " gene complement(352641..353210) /locus_tag="Dtpsy_0343" /db_xref="GeneID:7385351" CDS complement(352641..353210) /locus_tag="Dtpsy_0343" /note="PFAM: CinA domain protein; KEGG: ajs:Ajs_0354 CinA domain-containing protein" /codon_start=1 /inference="protein motif:PFAM:PF02464" /transl_table=11 /product="CinA domain protein" /protein_id="YP_002551827.1" /db_xref="InterPro:IPR008136" /db_xref="GI:222109563" /db_xref="GeneID:7385351" /translation="MELSKIELPALDGQALEADLIHISTALLARGWMLATAESCTGGL IAAACTDLSGSSQWFERGFVSYSNAAKTALLGVPADLITAHGAVSEPVARAMAEGAVR HSAAQVSVAVTGVAGPHGRQPGQAGGHGVVRLVRGGRHPFGAAALCRRPRRRARRHGA PRAGTAGAVAGPGARPFALLTVPLGLAAP" gene complement(353216..353746) /locus_tag="Dtpsy_0344" /db_xref="GeneID:7385352" CDS complement(353216..353746) /locus_tag="Dtpsy_0344" /note="PFAM: phosphatidylglycerophosphatase A; KEGG: ajs:Ajs_0355 phosphatidylglycerophosphatase" /codon_start=1 /inference="protein motif:PFAM:PF04608" /transl_table=11 /product="phosphatidylglycerophosphatase A" /protein_id="YP_002551828.1" /db_xref="InterPro:IPR007686" /db_xref="GI:222109564" /db_xref="GeneID:7385352" /translation="MPDTPPPTPLPPHALRRFLFVHPAHCIALGFGSGLSRVAPGTVG TLWGWLAFLVLQLWLTPRGMGLLIALSLLLGWWACTVTARHMRVADPGHIVWDEIVAI WIVLWLAMPMGFWGQLAAFALFRYFDAAKPGPVAWADRLFKGFGWRGGLGIMLDDLVA AFCTLLVIALWRHWFG" gene complement(353810..354784) /locus_tag="Dtpsy_0345" /db_xref="GeneID:7385353" CDS complement(353810..354784) /locus_tag="Dtpsy_0345" /EC_number="2.7.4.16" /note="KEGG: ajs:Ajs_0356 thiamine-monophosphate kinase; TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein" /codon_start=1 /inference="protein motif:TFAM:TIGR01379" /transl_table=11 /product="thiamine-monophosphate kinase" /protein_id="YP_002551829.1" /db_xref="InterPro:IPR000728" /db_xref="InterPro:IPR006283" /db_xref="InterPro:IPR010918" /db_xref="GI:222109565" /db_xref="GeneID:7385353" /translation="MGEFDLIARYFTRPVRRAALGVGDDCALLSVTPGMQLAVSSDML VEGRHFFADVDPAHLGHKALAVNLSDLAACGARPLAFTLALALPRVDAPWLQAFADGL LRLADAHQCELVGGDTTQGPLNLCVTVFGEVPTGQALLRSGARVGDDIYVSGTPGEAR LALDALRGRLALPPAALQQLRPRLEQPTPRVALGLALRGVASSAIDVSDGLLGDLGHI LKASGVGACVDATVATNLLAASAQQAVATADFGAQTLMQCALAGGDDYELVFTAPPAQ QAAVQAAAQASGTRATRIGRVEPAPGLRVVDGQGQPVAQHFASFDHFA" gene complement(354800..355924) /locus_tag="Dtpsy_0346" /db_xref="GeneID:7385354" CDS complement(354800..355924) /locus_tag="Dtpsy_0346" /note="PFAM: glutamate--cysteine ligase GCS2; KEGG: ajs:Ajs_0357 carboxylate-amine ligase" /codon_start=1 /inference="protein motif:PFAM:PF04107" /transl_table=11 /product="glutamate--cysteine ligase GCS2" /protein_id="YP_002551830.1" /db_xref="InterPro:IPR006336" /db_xref="InterPro:IPR011793" /db_xref="GI:222109566" /db_xref="GeneID:7385354" /translation="MSLEAFHHSEPLTLGVELELQLVSTNDYDLAPYAEDMLRLMKKV PLPGSVVPEMTNSMIEISTGVCHSSSEVLGQLTQIRDALVKSADKLNIAVVGGGTHPF QQWHERRIYDKPRFQELSQLYGYLSKQFTIFGQHVHIGCPDADSALLMLHRMSRYIPH FIALSASSPYVQAQDTQFDSARLNSVFAFPLSGRAPCVLTWSEFEQYFNKMTRTGVVK SMKDFYWDIRPKPEYGTIEIRVFDTPLTIERAAALAGYVQSLAAWFLAEQPFTPTEDD YLVYTYNRFQACRFGLDAVYVDPASGDHMPLRDHILQTLDHVARYAGTHGASGALHML RGETALGQNDARWLRERQREEQLLAEVSRQAALRFRGHDI" gene complement(355914..357179) /locus_tag="Dtpsy_0347" /db_xref="GeneID:7385355" CDS complement(355914..357179) /locus_tag="Dtpsy_0347" /note="PFAM: sodium/hydrogen exchanger; KEGG: ajs:Ajs_0358 sodium/hydrogen exchanger" /codon_start=1 /inference="protein motif:PFAM:PF00999" /transl_table=11 /product="sodium/hydrogen exchanger" /protein_id="YP_002551831.1" /db_xref="InterPro:IPR006153" /db_xref="GI:222109567" /db_xref="GeneID:7385355" /translation="MNELMSFWAQWLRPSAGLPTVQWSLLLAVASITGYLVQRYSGLP KVVGYTLVGTIVGLLGFGGAVWPLQGIGLFLVELGVAVVLFEAGGRIPLRWFRHNPMV LVQSIAESAFTYFAVYWTMLWFDVPERAAGPLALVAMAASPAVLTRVVSDTRAAGPVT DRAVVLATLSSLYALALGSAQAELINRPGVGLVGTLYPALVVLGVSVAVGALLSLILR LALRVMSPTSENTSMLLMALIAASTAVTAHMGGSAPLAALLGGMLLKQLHPRPWAWPR QMGTASSLLTMLMFVLVSTVAAQADWSGPVVGAVLALIFVRLLAKALGVGVGNVGSGA SWRQAMWLSCAMAPMSAIALLVASQFVVASASTGHLIARIALPAILVMEVLGAVIATV AIYRAGESSKPWAPLSSRGSNTGDTQRES" gene complement(357361..359343) /locus_tag="Dtpsy_0348" /db_xref="GeneID:7385356" CDS complement(357361..359343) /locus_tag="Dtpsy_0348" /note="KEGG: ajs:Ajs_0359 putative site-specific recombinase transmembrane protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0359" /transl_table=11 /product="putative site-specific recombinase transmembrane protein" /protein_id="YP_002551832.1" /db_xref="GI:222109568" /db_xref="GeneID:7385356" /translation="MSRSGPDLAQLLAGIDPTAPLAQRHLQLIAVLDWVRGDGQSTEG AAGRVALLVDAAERSPDIQVRLQAWWAALTQQVDITTLLADFGFAQRTSMASELAERV RYKLLPSSPETLDASELFMLALPGDFDARWLASLDETLLGRLLAVLVPACEQGGASHW QRALLDAITYCAGQILSTGFAPELRLRMSEEAREAQPFHALIRDVESLRVEVEHPLRT GDRLQEAVQRLRERLDACRAATNTVYAHFEDNGISVGLVFRLRQLRERILRVRELLEC LLSPRPAVAAAKFLARLVTVGRERRSLRALVASNSSMLAAKVAERSAETGAHYITRTA GEYLAMVRKAAGGGLVMAFTTLAKFGLYALALSAFWGGFMAGVNYAVSFVLIQLLHFT VATKQPAMTAPAMAAKLKDLDEAQGLESFVDEVAHLVRSQVAAVLGNVLLVFPGALAL ALLIAQMLGQPAIGTAQAEHVLQSLHLLGPSLLFAAFTGVLLFASSIFAGWVENWFVL RRLDSAIQYNPRITDMLGAARAARWARFLRGNISGFAANISLGFMLGLTPAFAAFFGL GLDVRHVTLSTGQIGVASATLGMDVLHQPAFWWAVAMVPFNGALNVLVSFYLAFRLAL RAHNVGSVDRARIYRALLARWRSAPLGFFLPRRRTV" gene complement(359340..359747) /locus_tag="Dtpsy_0349" /db_xref="GeneID:7385357" CDS complement(359340..359747) /locus_tag="Dtpsy_0349" /note="PFAM: ApaG domain protein; KEGG: ajs:Ajs_0360 ApaG" /codon_start=1 /inference="protein motif:PFAM:PF04379" /transl_table=11 /product="ApaG domain protein" /protein_id="YP_002551833.1" /db_xref="InterPro:IPR007474" /db_xref="GI:222109569" /db_xref="GeneID:7385357" /translation="MPKYQFQVEVQPQYLPDESAPDEGVYSFAYTITITNTGDVTAQL ISRHWIISDANGHTEQVKGLGVVGQQPLLKPGEAFQYTSGCRLRTASGSMHGSYFCVA EDGEPFTCPIELFVLEAFSPGQPGQPMAARVLH" gene 359869..360549 /locus_tag="Dtpsy_0350" /db_xref="GeneID:7385358" CDS 359869..360549 /locus_tag="Dtpsy_0350" /EC_number="5.1.3.1" /note="KEGG: ajs:Ajs_0361 ribulose-5-phosphate 3-epimerase; TIGRFAM: ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase" /codon_start=1 /inference="protein motif:TFAM:TIGR01163" /transl_table=11 /product="ribulose-phosphate 3-epimerase" /protein_id="YP_002551834.1" /db_xref="InterPro:IPR000056" /db_xref="GI:222109570" /db_xref="GeneID:7385358" /translation="MSRTYRIAPSILSADFARLGEEVRNVIAAGADWIHFDVMDNHYV PNLTFGPMVCQALKPHAVTPAGHAVPIDVHLMVQPVDELATAFAKAGADLISFHPDAS AHVHRSIQNIRAQGCKAGLTFNPAMPLDVLDWVIEDIDLILLMSVNPGFGGQSFIDST LRKIEAARRRIEASGKDIRLEVDGGIKADNIRRVADAGADTFVAGSAIFGKSDYKAVI DAMRAELA" gene complement(360589..360954) /locus_tag="Dtpsy_0351" /db_xref="GeneID:7385359" CDS complement(360589..360954) /locus_tag="Dtpsy_0351" /note="KEGG: ajs:Ajs_0362 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0362" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551835.1" /db_xref="GI:222109571" /db_xref="GeneID:7385359" /translation="MALHRFTALLPAALLLCAGAAQAANEVRSQYSSDRAACASVPAE SRAACVREAGAAAQAARAGQLSSSDTSIYERNALARCEAFKTPHDRSDCEARVRSSAT VSGSVEGGGVLREATTPVQ" sig_peptide complement(360883..360954) /locus_tag="Dtpsy_0351" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.999 at residue 24" gene 361121..361846 /locus_tag="Dtpsy_0352" /db_xref="GeneID:7385360" CDS 361121..361846 /locus_tag="Dtpsy_0352" /note="TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: ajs:Ajs_0363 phosphoglycolate phosphatase" /codon_start=1 /inference="protein motif:TFAM:TIGR01449" /transl_table=11 /product="phosphoglycolate phosphatase" /protein_id="YP_002551836.1" /db_xref="InterPro:IPR005833" /db_xref="InterPro:IPR005834" /db_xref="InterPro:IPR006346" /db_xref="InterPro:IPR006402" /db_xref="InterPro:IPR006439" /db_xref="GI:222109572" /db_xref="GeneID:7385360" /translation="MERVQQDLAALLARTDAAIVDLDGTMVDTLGDFAEALNRMLRDL QLPAIAPAAIERMVGKGSEHLLRSVLKHVLAPDQQALTAMQLEAKAEALYPQAWERYQ HHYLAINGQYAALYAGVAEGLAALHRTGRPLVCLTNKPTDFARPLLRAKGLDGFFTHV FGGDAFARKKPDPLPLLKACEAVGTSPARTLMIGDSSNDAQAARAAGCPVVLVTYGYN HGQPVRGVDADGYVDALTELIAS" gene complement(361898..363592) /locus_tag="Dtpsy_0353" /db_xref="GeneID:7385361" CDS complement(361898..363592) /locus_tag="Dtpsy_0353" /note="PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; Cache type 2 domain protein; SMART: chemotaxis sensory transducer; KEGG: aav:Aave_2643 methyl-accepting chemotaxis sensory transducer" /codon_start=1 /inference="protein motif:PFAM:PF00015" /transl_table=11 /product="methyl-accepting chemotaxis sensory transducer with Cache sensor" /protein_id="YP_002551837.1" /db_xref="InterPro:IPR003660" /db_xref="InterPro:IPR004089" /db_xref="InterPro:IPR004090" /db_xref="InterPro:IPR013163" /db_xref="GI:222109573" /db_xref="GeneID:7385361" /translation="MQMFYRLPVSRRLGGLVALAILAMLALVASIMWTERSLIMGERQ ASVRQTVEAAHGIVVHFHAQASKGTITEEEAKQRAMDALRPLRYSGSEYFWINDMHPR MVMHPIRPELQGQDLSSNKDPTGKHLFVEFVNTVKRSGAGFVSYLWPKPGSDQPVEKA SYVMGFEPWGWVIGSGVYVDNVQATFVSRLARSGAVTAVLALLLLAIGWLVARSILRQ LGAEPSQLNAITHEMAQGNLAVEIPPARDSDSVIHGIQTMRDNVAEIVQGVRRSSEHV ATASAEISQGNHDLSGRTESQASALEETAASMEQLGATVRQNADNARQANQLAMNAST VAVQGGEVVSEVVDTMRGINESSRKIADIIGVIDGIAFQTNILALNAAVEAAKEIKQL ITASVERVEQGSQLVDKAGATMTEVVTAIRRVTDIMGEISAASSEQSSGVAQVGEAIT QMDQATQQNAALVEEMAAAASSLSGQARELVEAVAVFKLAQKVSALPRMAPVHAPAVP APVPATSATPAAPARPATPPASTRAPAAALARPAAARPQPAQAARTAADNDEWESF" sig_peptide complement(363503..363592) /locus_tag="Dtpsy_0353" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.997) with cleavage site probability 0.698 at residue 30" gene complement(363628..365364) /locus_tag="Dtpsy_0354" /db_xref="GeneID:7385362" CDS complement(363628..365364) /locus_tag="Dtpsy_0354" /note="PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; SMART: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: ajs:Ajs_0364 methyl-accepting chemotaxis sensory transducer" /codon_start=1 /inference="protein motif:PFAM:PF00015" /transl_table=11 /product="methyl-accepting chemotaxis sensory transducer" /protein_id="YP_002551838.1" /db_xref="InterPro:IPR003660" /db_xref="InterPro:IPR004089" /db_xref="InterPro:IPR004090" /db_xref="GI:222109574" /db_xref="GeneID:7385362" /translation="MHLSNLKVGTRLALSFGLVLLITVVIAAVGIWRLQELASVTHQL TSTDNERLRAASTWRQAIDLNWVRTRAAILDADTSHLSSWQSEIAKTSEEASKAQEVV ERLVTTDEGRRLLADIAKTREAYRGPRAELLKRKAAGESVGELLDSQLKPLADAYLQS IVAMEQRQRALYESTRDNAAKQATLSRAILMVVTAVALLVGAGAAILLSRSVTGPLQL AVRGAGLIAEGDLTQSIQAHGRDEAAALLKALGHMQGNLARVVAGVRANAESVASASA EISQGNHDLSGRTESQASALEETAASMEQLGATVRQNADNARQANQLAMNASTVAVQG GEVVSEVVDTMRGINESSRKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAV VAGEVRALAQRSAEAAKEIKQLITASVERVEQGSQLVDKAGATMTEVVTAIRRVTDIM GEISAASSEQSAGVAQVGEAITQMDQATQQNAALVEEMAAAASSLSGQARELVEAVAV FKLASHGHALATPAAIRTPQPSAPAVTRAAPPARPASAPVQPAARQARPVSASPKAAP APSADDGAWESF" sig_peptide complement(365281..365364) /locus_tag="Dtpsy_0354" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.997) with cleavage site probability 0.958 at residue 28" gene complement(365486..366088) /locus_tag="Dtpsy_0355" /db_xref="GeneID:7385363" CDS complement(365486..366088) /locus_tag="Dtpsy_0355" /note="KEGG: ajs:Ajs_0365 putative lipoprotein transmembrane" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0365" /transl_table=11 /product="putative lipoprotein transmembrane" /protein_id="YP_002551839.1" /db_xref="GI:222109575" /db_xref="GeneID:7385363" /translation="MPFTRRRTLQWGALALPLCLALPAPASTEPTTAAGVKFEPTLDL GGSKLQLNGAGVRYKAVFKVYAAGLYLEKKASTPAEVYALRGPKRISVTMLRDIDSTE LGKLFSRGMEDNMDKAAFSKLIPGVLRMSQIFSEHKKLMAGEQFVVDWLPGTGTQVTV KGVPQGEPFKEPEFFNALLGIWLGSQPADWKLKDALLGKE" sig_peptide complement(366002..366088) /locus_tag="Dtpsy_0355" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.979 at residue 29" gene 366445..367944 /locus_tag="Dtpsy_0356" /db_xref="GeneID:7385364" CDS 366445..367944 /locus_tag="Dtpsy_0356" /EC_number="4.1.3.27" /note="KEGG: ajs:Ajs_0366 anthranilate synthase component I; TIGRFAM: anthranilate synthase component I; PFAM: Anthranilate synthase component I domain protein; Chorismate binding-like" /codon_start=1 /inference="protein motif:TFAM:TIGR00564" /transl_table=11 /product="anthranilate synthase component I" /protein_id="YP_002551840.1" /db_xref="InterPro:IPR005256" /db_xref="InterPro:IPR005801" /db_xref="InterPro:IPR006805" /db_xref="InterPro:IPR015890" /db_xref="GI:222109576" /db_xref="GeneID:7385364" /translation="MITELEFKSLASEGYNRIPLMAEAFADLETPLSLYLKLAHGKGD GKHSFLLESVVGGERFGRYSFIGLPARTLLRSSGFGDAARTEVVTDGQVVETHPGNPL DFIAAYQKRFKVALRPGLPRFCGGLAGYFGYDAVRYIEKKLEATCPPDTLGCPDILLL QCEELAVIDNLSGKLYLIVYADPAQPEAYAKGKKRLRELKDQLKYSVSAPVVRPTESH TAQRSFAKADYLAAVERAKELIAAGDFMQVQVGQRIHKRYTESPLSLYRALRSLNPSP YMYYYNFGDFQVVGSSPEILVRQESTPEGQKVTIRPLAGTRPRGATPEADKATEVELV NDPKERAEHVMLIDLARNDIGRIAKTGTVKVTEAFAVERYSHVMHIVSNVEGILNDGM TSMDVLKATFPAGTLTGAPKVHAMELIDQLEPSKRGLYGGACGYLSYAGDMDVAIAIR TGIVKDGTLYVQAAAGVVADSVPELEWKETEHKARALLRAAELVEEGLE" gene 367941..368285 /locus_tag="Dtpsy_0357" /db_xref="GeneID:7385365" CDS 367941..368285 /locus_tag="Dtpsy_0357" /note="PFAM: Chorismate mutase; KEGG: ajs:Ajs_0367 chorismate mutase" /codon_start=1 /inference="protein motif:PFAM:PF01817" /transl_table=11 /product="Chorismate mutase" /protein_id="YP_002551841.1" /db_xref="InterPro:IPR002701" /db_xref="GI:222109577" /db_xref="GeneID:7385365" /translation="MTTRAIDKTQPCASMAEVRARIDALDDILVPLLVERGGYMTQAA LNKPREDQVRDEARIEAIVQRVRARAAAEGGEPDVIEAIYRSMMEAYIAYEHREFARL CAEGRKGQEVTP" gene 368282..368854 /locus_tag="Dtpsy_0358" /db_xref="GeneID:7385366" CDS 368282..368854 /locus_tag="Dtpsy_0358" /note="TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: ajs:Ajs_0368 anthranilate synthase component II" /codon_start=1 /inference="protein motif:TFAM:TIGR00566" /transl_table=11 /product="glutamine amidotransferase of anthranilate synthase" /protein_id="YP_002551842.1" /db_xref="InterPro:IPR000991" /db_xref="InterPro:IPR001317" /db_xref="InterPro:IPR006220" /db_xref="InterPro:IPR006221" /db_xref="InterPro:IPR011702" /db_xref="GI:222109578" /db_xref="GeneID:7385366" /translation="MTRVLMVDNYDSFTYNIVQYFGELGAEVEVFRNDEITLEGIAAR APDRLVISPGPCSPAEAGISVAAIQHFAGKLPILGVCLGHQSIGAAFGGKIIRAQQLM HGKTSVITTTQTGVFAGLPKQFTVNRYHSLSIERASCPEVLEVTAWTDDGEIMGIRHR ELAIEGVQFHPESILTEHGHAMLKNFLDQK" gene 368952..369986 /locus_tag="Dtpsy_0359" /db_xref="GeneID:7385367" CDS 368952..369986 /locus_tag="Dtpsy_0359" /EC_number="2.4.2.18" /note="KEGG: ajs:Ajs_0369 anthranilate phosphoribosyltransferase; TIGRFAM: anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like" /codon_start=1 /inference="protein motif:TFAM:TIGR01245" /transl_table=11 /product="anthranilate phosphoribosyltransferase" /protein_id="YP_002551843.1" /db_xref="InterPro:IPR000312" /db_xref="InterPro:IPR005940" /db_xref="InterPro:IPR017459" /db_xref="GI:222109579" /db_xref="GeneID:7385367" /translation="MTPITPQEALQRTIEHREIFHDEMLHLMRMIMSGELSPVMTAAI TTGLRVKKETIGEITAAAQVMREFSHKVQVHDTKHLVDIVGTGGDGANTFNISTCATF VIAAAGAKVSKHGGRSVSSKSGSADAMEALGVHINLQPAQIAQCIGDVGIGFMFAPNH HPAMKNVAPVRKELGVRTIFNILGPLTNPAGAPNILMGVFHEDLVGIQVRALQRLGAE HALVVYGRDGLDEISLGAGTLVGELKDGAVREYEIHPEDFGLRMAGTRALRVENPTES KAMLMGVLQGDEGPARDIVCLNAGAALYAANVADSLEDGLRRAQQALASGAALAKLQQ LVAYTQKLAA" gene 369997..370170 /locus_tag="Dtpsy_0360" /db_xref="GeneID:7385368" CDS 369997..370170 /locus_tag="Dtpsy_0360" /codon_start=1 /inference="ab initio prediction:Prodigal:1.4" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551844.1" /db_xref="GI:222109580" /db_xref="GeneID:7385368" /translation="MSLLDAPIWNDPATWIVLGVSLLFIVVGIVMHRIIMKVVRGPAP PTQGHKGPVPPHE" gene 370241..371041 /locus_tag="Dtpsy_0361" /db_xref="GeneID:7385369" CDS 370241..371041 /locus_tag="Dtpsy_0361" /EC_number="4.1.1.48" /note="PFAM: Indole-3-glycerol phosphate synthase; KEGG: ajs:Ajs_0370 indole-3-glycerol-phosphate synthase" /codon_start=1 /inference="protein motif:PRIAM:4.1.1.48" /transl_table=11 /product="Indole-3-glycerol-phosphate synthase" /protein_id="YP_002551845.1" /db_xref="InterPro:IPR001468" /db_xref="InterPro:IPR013798" /db_xref="GI:222109581" /db_xref="GeneID:7385369" /translation="MSDILKKICDVKVEEVAAAQKRVSFTDMRRDAESRVLTRDFVGA LRAKIDQGQAGVIAEIKKASPSKGVIREDFIPADIAQSYAEGDGKVSAACLSVLTDRQ FFQGQPDYLKQARASCPLPVLRKDFMIDPYQIYESRAMGADCVLLIAACLEDGLMAEM EQFARSLDMAVLVEVHDGAELERALRLQTPLVGINNRNLRTFEVSLQTTLDLKKEVPA DRLLVAESGILAPVDVHTLRDAGVNAFLVGEAFMRAPDPGRALAQLFA" gene 371180..373852 /locus_tag="Dtpsy_0362" /db_xref="GeneID:7385370" CDS 371180..373852 /locus_tag="Dtpsy_0362" /note="KEGG: ajs:Ajs_0371 diguanylate cyclase with PAS/PAC sensor; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; GGDEF domain containing protein; PAC repeat-containing protein" /codon_start=1 /inference="protein motif:TFAM:TIGR00254" /transl_table=11 /product="diguanylate cyclase with PAS/PAC sensor" /protein_id="YP_002551846.1" /db_xref="InterPro:IPR000014" /db_xref="InterPro:IPR000160" /db_xref="InterPro:IPR000700" /db_xref="InterPro:IPR001610" /db_xref="InterPro:IPR013655" /db_xref="InterPro:IPR013767" /db_xref="GI:222109582" /db_xref="GeneID:7385370" /translation="MRERPDTQAERFRREWWLLAGLWLALGALIAVVLSLERRDTEER ERQQVAHQVHIVHENLERQLHAVNQALGDIVANLAQWRARPEGALPFNERLRAFSDAM TGVRTLTVLDAEGTVVASSRAELLGENFAYRDYFQSARRLASREQPSLIVSAPMRTVL GIWAITLSRPVPAEDGLPGGVVTATLDPDEFKTLLDSVRYAPDVESTLVHGDGVRFLR VPERAGLLGATLAQPGTLFQAHLDSGRMESLFVGAMEPDPAERLVALRTIFPAHLHMD KPLVAAVARDWSQVFAAWRARAWTLGVAWLLTGVAIGLGLGFMQRRRRQLWRREQALA AQEAALQARWQAVLHATQQGVWDWDMAAGTVYFSPVWKTMLGYAEGDIGDSLQEWESR VHPDDLARVHADVARHLAGETVVYENVHRMRCKDGSYKWVQDRGQVTSRDASGRPTRL IGTHTDVTAQRQHQETLDRLAENVPGALYQYQREPDGRSHFPYASPGVQDIYGLPPQA LCVDAEQVFARIHPDDLQALRESVLASAQTLELWRTEYRVLVPGERERWVSDQARPAR TASGAVLWHGYIHDVTLAKQQALQLQETERLLRHLMQEMPIGLCMIDAAGVIYFRNRR FMDLFGYTEAEVPTLGQWWPRAYPDPHYREQVIAAWNADLAQAGAQGGEIADREYRVT DRDGRLHTMTIGGLAFGDHCMATFVDVTEQRAQHELLRKLAFMDGLTGLANRRQLDRT LKAEWRRCRRSGQPLSVVMVDIDHFKQFNDLYGHQQGDDCLRAVAAALRGGLGRSHDL VARYGGEEFVCLLPECDLDGARAKAQALCRAVHARQMEHRGSPIAPVVTVSAGVACVV PGAEDTPEQLLARADANLYRAKAAGRNRVHDGMD" gene 373907..374620 /locus_tag="Dtpsy_0363" /db_xref="GeneID:7385371" CDS 373907..374620 /locus_tag="Dtpsy_0363" /note="TIGRFAM: uracil-DNA glycosylase; PFAM: Uracil-DNA glycosylase superfamily; KEGG: ajs:Ajs_0372 uracil-DNA glycosylase" /codon_start=1 /inference="protein motif:TFAM:TIGR00628" /transl_table=11 /product="uracil-DNA glycosylase" /protein_id="YP_002551847.1" /db_xref="InterPro:IPR002043" /db_xref="InterPro:IPR005122" /db_xref="GI:222109583" /db_xref="GeneID:7385371" /translation="MLNTPAATQLQSADPADWPVAPGWQPLVDTFFASARGRQLLAFL QARLEAGAAIFPPQPLRALQLTAPEDTRVVILGQDPYHGRGQAEGLAFSVAPGVRLPP SLQNIFKEMQRDMGVPFPPFPNPGGSLVKWAQNGVLLLNTCLTVEEGQAASHAGKGWE QLTDAVIREVAEGPRPVVFMLWGSHAQSKRAFIPRDRGHLVLTSNHPSPLSALRPPVP FIGNGHFGQARAFRQQHGY" gene complement(374621..375508) /locus_tag="Dtpsy_0364" /db_xref="GeneID:7385372" CDS complement(374621..375508) /locus_tag="Dtpsy_0364" /note="PFAM: protein of unknown function DUF6 transmembrane; KEGG: ajs:Ajs_0373 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF00892" /transl_table=11 /product="protein of unknown function DUF6 transmembrane" /protein_id="YP_002551848.1" /db_xref="InterPro:IPR000620" /db_xref="GI:222109584" /db_xref="GeneID:7385372" /translation="MSAGPAGHSPRTALAGIALTVGACASFALLDTATKLVSATTPLL LALWLRYVFQSLVTSAYVLPRSDWRPPRTDHPRYQLLRAVLFAATSLFGIFSIRAMPL AEFTAIVAATPLCVTLVAALWLRQPVSALRWLLVATGLASVLLILRPGGQSFSGVLVL PLGMLACGTGYQILSSRMAGQEAPTTTQFYTSWIAAGLMTLAAPFVWTAITSAWVWLG LVVMGLSSALGHLLLLRAYACAAPATIAPFLYTQIAFAMLAGWAVYGHMPDRWSLLGI CLIAASGAASAWLTVRERR" sig_peptide complement(375416..375508) /locus_tag="Dtpsy_0364" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.927) with cleavage site probability 0.597 at residue 31" gene complement(375505..376605) /locus_tag="Dtpsy_0365" /db_xref="GeneID:7385373" CDS complement(375505..376605) /locus_tag="Dtpsy_0365" /note="TIGRFAM: S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein; KEGG: ajs:Ajs_0374 S-adenosylmethionine--tRNA-ribosyltransferase-isomerase" /codon_start=1 /inference="protein motif:TFAM:TIGR00113" /transl_table=11 /product="S-adenosylmethionine/tRNA-ribosyltransferase- isomerase" /protein_id="YP_002551849.1" /db_xref="InterPro:IPR003699" /db_xref="GI:222109585" /db_xref="GeneID:7385373" /translation="MSSASTAPRTFTLSDFDFELPELLIAQHPAPQRSGSRLLDGRTA PPTDRIFRELPDLLQPGDLLVFNDTRVVKARVFGEKASGGKLELLIERVLTGNEVVAH MKVSKKPLPGATLHLAGGAAAGGFDATLLGRYPDADGPLFRLALRGPAGESPWELMER HGHLPLPPYIERQQAGGNDPHAGEDSERYQTVFARAPGAVAAPTAALHFDDAVLARLA ERGIERASVTLHVGAGTFQPVKTENLAEHRMHSEWYEVPLATLAALERCRQRGGRVVA VGTTTVRTLESWAASGQAAGDTSIFITPGFQFQVVDLLLTNFHLPKSTLMMLVSAFAG YEHIMQLYRHAVAQRYRFFSYGDCMLLERPRA" gene complement(376709..377968) /locus_tag="Dtpsy_0366" /db_xref="GeneID:7385374" CDS complement(376709..377968) /locus_tag="Dtpsy_0366" /note="KEGG: aav:Aave_0592 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; Metal-dependent hydrolase HDOD; SMART: metal-dependent phosphohydrolase HD region" /codon_start=1 /inference="protein motif:TFAM:TIGR00277" /transl_table=11 /product="metal dependent phosphohydrolase" /protein_id="YP_002551850.1" /db_xref="InterPro:IPR003607" /db_xref="InterPro:IPR006674" /db_xref="InterPro:IPR006675" /db_xref="InterPro:IPR013976" /db_xref="GI:222109586" /db_xref="GeneID:7385374" /translation="MLKRIEVKHLTLGMYLHEFCGSWMEHPFWRSRFLLQDPQDLARI RATDIHEVWIDTSKGLDIAPGTASVSRAEADAQLDSDFQHLEDLPAQPAPAPAVTPQP AGMDQELRRAAAICSQAKQAVVTMFGQARLGRAIDTAVAQEMVDEITDSVTRNPDALI SLARLKTADEYTYMHSVAVSALMVALARQIGMDDGATRMAGLAGLLHDIGKAAVPLEV LNKPGKLTDDEFTVVRSHPVAGYDLLQGTDLPEPVLDACLHHHEKMDGTGYPHRLTGE QISTLARMTAICDVYDAITSDRPYKRGWDPSESLRRMAEWTRDHFDSRLFQAFVKTIG IYPVGSLVRLASGRLGVVTEQSPGKLIAPRVRVFYSTRSDLRIPPEVVDLSEPDCRDK IIAREDPARWQFPDLAQLWSDLPNPRW" gene 378027..380198 /locus_tag="Dtpsy_0367" /db_xref="GeneID:7385375" CDS 378027..380198 /locus_tag="Dtpsy_0367" /note="KEGG: ajs:Ajs_0376 ATP-dependent DNA helicase RecG; TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DEAD/DEAH box helicase domain protein; SMART: helicase domain protein; DEAD-like helicases" /codon_start=1 /inference="protein motif:TFAM:TIGR00643" /transl_table=11 /product="ATP-dependent DNA helicase RecG" /protein_id="YP_002551851.1" /db_xref="InterPro:IPR001650" /db_xref="InterPro:IPR002016" /db_xref="InterPro:IPR004365" /db_xref="InterPro:IPR004609" /db_xref="InterPro:IPR011545" /db_xref="InterPro:IPR014001" /db_xref="InterPro:IPR014021" /db_xref="GI:222109587" /db_xref="GeneID:7385375" /translation="MPRPTRSSTSASSSAKPAPSPAQQALVKLGLVRDIDLALHLPLR YEDETRITPIRSARDGDTVQIEATVTASEVQMRPRRQLVVTVEDGTGSCELRFFSFYP SHQKTMAVGARLRVRGEIKGGFWGRQMLHPAFRKAEGDLPAALTPVYPTVAQLPQAYL RRAVASALTRVELPETLPPGLEPPAVPSWVRGNGQNGLLRPWSLREALLFLHHPAPDV ALATLQDHSHPAWQRLKAEELLAQQLSQLTAKRERARLRAPALRPQAQAGSTPLHEQL LGVLPFSLTAAQRRVGEEIARDLARPVPMHRLLQGDVGSGKTVVAALAATVCMDAGWQ CALMAPTEILAEQHFAKLIGWLQPLLAARGRQVAWLVGGQKKKERAEMLARIESGEAA LVVGTHAVIQEQVRFKNLALAVIDEQHRFGVAQRLALRKKLQHAGMEPHLLMMSATPI PRTLAMSYYADLDVSTIDELPPGRTPIVTKLIADSRKDEVVERIGAQVAAGRQVYWVC PLIEESEALDLSNATATHAELSEALQGDAAHGRAPVMVGLLHSRMPAAEKKAVMDLFK GGQMGVLVSTTVIEVGVDVPNASLMVIEHAERFGLSQLHQLRGRVGRGAAASACVLLY STGDSGRLGETARDRLKAMAETTDGFEIARRDLEIRGPGEFLGARQSGDALLRFADLA TDTLLLEWARETAPQMLDRHPLLAERHIQRWLGGKSDYLKA" gene 380267..381232 /locus_tag="Dtpsy_0368" /db_xref="GeneID:7385376" CDS 380267..381232 /locus_tag="Dtpsy_0368" /note="PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_0377 LysR family transcriptional regulator" /codon_start=1 /inference="protein motif:PFAM:PF03466" /transl_table=11 /product="transcriptional regulator, LysR family" /protein_id="YP_002551852.1" /db_xref="InterPro:IPR000847" /db_xref="InterPro:IPR005119" /db_xref="GI:222109588" /db_xref="GeneID:7385376" /translation="MTLTELKYIVAVAREKHFGRAAEACYVSQPTLSVAVKKLEDELE VKLFERSAGDVSVTPLGEEIVRQAQSVLEQAAAIKEIAKRGKDPLAGALTLGVIYTIG PYLLPELVRHAIARTPQMPLMLQENFTVKLLEMLRTGEIDCAIMAEPFPDTGLAIAPL YDEPFLAAVPSSHPLAERDAVSASELKNETMLLLGAGHCFRDHVLEVCPEFARYASNA EGIRRTFEGSSLETIKHMVSAGMGVTLVPRLSVPRDALHTGARRRKSDDTHIRYLPIK ESDGSPPPMRRVVLAWRRSFTRYEAIAALRNAVYACELPGVTRLS" gene 381310..381828 /locus_tag="Dtpsy_0369" /db_xref="GeneID:7385377" CDS 381310..381828 /locus_tag="Dtpsy_0369" /note="PFAM: Ferritin Dps family protein; KEGG: ajs:Ajs_0378 ferritin, Dps family protein" /codon_start=1 /inference="protein motif:PFAM:PF00210" /transl_table=11 /product="Ferritin Dps family protein" /protein_id="YP_002551853.1" /db_xref="InterPro:IPR002177" /db_xref="InterPro:IPR008331" /db_xref="GI:222109589" /db_xref="GeneID:7385377" /translation="MAKPSSKSVSTKSGAPRINIGISDKDRAAIAQGLSRLLADTYTL YLTTHNFHWNVTGPMFNTLHTMFMAQYTELWNAVDPVAERIRSLGHVAPGSYAQFGQL TSLPDVPAQPPKATEMIRILVEGHEAVARTARELFPLADKASDEPTADLLTQRLTVHE QTAWMLRSLLED" gene 381855..383393 /locus_tag="Dtpsy_0370" /db_xref="GeneID:7385378" CDS 381855..383393 /locus_tag="Dtpsy_0370" /note="PFAM: CHAD domain containing protein; adenylate cyclase; KEGG: ajs:Ajs_0379 adenylate cyclase" /codon_start=1 /inference="protein motif:PFAM:PF05235" /transl_table=11 /product="CHAD domain containing protein" /protein_id="YP_002551854.1" /db_xref="InterPro:IPR007899" /db_xref="InterPro:IPR008172" /db_xref="GI:222109590" /db_xref="GeneID:7385378" /translation="MSATETELKLALPPRDAAALAARLMRVPALARATPVREHLVSLY HDTPAQDLLRQRVALRLRREGPEGAGARWLQTLKTAGDTTSALSQRGEWEMPVAGPAL ELHRLEGTPWPAMDPDGVLAGALQPCFTTDFVRTRWRVRVRGGAVVEVALDVGAVTAT VDGAAHATPLCELELELLQGPPEALLALARRIARHVPVLPLAASKAARGYALLHPPAS PAVEAQPPALKRGMTVAQVAERVLQEPFHQFCANLFALQQGSDAPEVVHQARVGWRRL RSLARLFAPACAARPAPAAAALAPLLQSLGHLRDLDVARTQTLPALAAHYAQGGARQA AAWAAAQAALDAAADQARAQTRAALHRPAVGAALLAWQDWLHGWALAAQGECGVEACA SDALAGAPARHWVRKRVQRLVRRLGAALKTAGDDEGLHHARILAKRLRYGSTSLAPLL PGRMGRHRGAAEQWQERLGAQRDWAQAAALVAGCGGDAAVVAFLRGAALGRGWDPLRD AARR" gene 383597..384469 /locus_tag="Dtpsy_0371" /db_xref="GeneID:7385379" CDS 383597..384469 /locus_tag="Dtpsy_0371" /note="TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; PFAM: UbiA prenyltransferase; KEGG: ajs:Ajs_0380 4-hydroxybenzoate octaprenyltransferase" /codon_start=1 /inference="protein motif:TFAM:TIGR01474" /transl_table=11 /product="4-hydroxybenzoate polyprenyl transferase" /protein_id="YP_002551855.1" /db_xref="InterPro:IPR000537" /db_xref="InterPro:IPR006370" /db_xref="GI:222109591" /db_xref="GeneID:7385379" /translation="MSAVAPRSRLSLYLDLIRWNRPAGWLVLVWPTLAALWVAADGFP GWHLLAVFVAGTVLMRSAGCTINDIADRDFDRHVKRTTQRPITSGQLGVREAALVGVV LTLVAFVLVLTTRWEAVAWSVPAVLFTILYPFTKRFFAMPQAFLGIAFNFGIVIAFAA VQGRVPATAWVLWLANLFLVLAYDTEYAMVDRDDDLKIGMKTSAITLGRFDVAAIMGF FVLCLGLTAWVLAPYGLGWPLWLGLGVAAAQVAWHFTLIKDRTREGCFTAFSKSHWIG AAIFAGVALGYLLR" gene complement(384525..385391) /locus_tag="Dtpsy_0372" /db_xref="GeneID:7385380" CDS complement(384525..385391) /locus_tag="Dtpsy_0372" /EC_number="1.5.1.2" /note="KEGG: ajs:Ajs_0381 pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent" /codon_start=1 /inference="protein motif:TFAM:TIGR00112" /transl_table=11 /product="pyrroline-5-carboxylate reductase" /protein_id="YP_002551856.1" /db_xref="InterPro:IPR000304" /db_xref="InterPro:IPR004455" /db_xref="GI:222109592" /db_xref="GeneID:7385380" /translation="MPPDPIASPPNPMTASASPLPPIAFIGGGNMASAIIGGLLQRGL PAGQIEVVEPFEPARAALQDKFGITAQPAAGDALARAALVVWAVKPQTFKEAAAATRA HTATALHLSVAAGIPTDSIARWLDTQHIVRAMPNTPALVGKGITGLFARPQVDPQGKA LVERVIATTGQFVWVEAEEQLDAVTALSGSGPAYVFLFLEAMTQAGVDMGLPPAQAYQ LAVATFQGASELAARSPESAEVLRQRVTSKGGTTHAAITHLQAAQVPAHFIAAMRAAE ARAKELAAEFGA" gene complement(385521..387017) /locus_tag="Dtpsy_0373" /db_xref="GeneID:7385381" CDS complement(385521..387017) /locus_tag="Dtpsy_0373" /note="TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: ajs:Ajs_0382 glycerol kinase" /codon_start=1 /inference="protein motif:TFAM:TIGR01311" /transl_table=11 /product="glycerol kinase" /protein_id="YP_002551857.1" /db_xref="InterPro:IPR000577" /db_xref="InterPro:IPR005999" /db_xref="GI:222109593" /db_xref="GeneID:7385381" /translation="MTYLLALDQGTSSSRSIVFDERGRIVAQAQRELPQIYPRPGWVE HDPREIWRTQLATAQDALREARITAQDVRALGITNQRETTVLWNRRTGQPVHHAIVWQ DRRAEPACAQLREQGHAAAIQAKTGLLIDAYFSGTKLQWLLDHVPGARDAAEAGELAF GTVDSWLIWQLTGGTRHVTDVSNASRTMLFNVHTNQWDDELLQLLRIPRALMPEVLPS ASDFGATDAALLGGPIAIGGVAGDQQSALFGQACFTAGMAKNTYGTGCFMLMHTGSRF QKSENGLLTTSAAQASRSPEYAMEGSVFVGGAVVQWLRDGLRAISASSEVQALAESVP DSGGVMMVPAFTGLGAPYWKPDARGTITGLTRGTTIAHIARAALESIAYQSAALLAAM SRDAVAAGGAPVSELRVDGGACVNDLLMQFQADLLGIPVVRPAVVETTALGAAYLAGL ASGVYASTDELSALWQAERRFTPTLPRSQAEALMARWEHAVAQAVLPG" gene complement(387067..387855) /locus_tag="Dtpsy_0374" /db_xref="GeneID:7385382" CDS complement(387067..387855) /locus_tag="Dtpsy_0374" /note="PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; regulatory protein Crp; KEGG: ajs:Ajs_0383 DeoR family transcriptional regulator" /codon_start=1 /inference="protein motif:PFAM:PF08220" /transl_table=11 /product="transcriptional regulator, DeoR family" /protein_id="YP_002551858.1" /db_xref="InterPro:IPR001034" /db_xref="InterPro:IPR001808" /db_xref="InterPro:IPR013196" /db_xref="InterPro:IPR014036" /db_xref="GI:222109594" /db_xref="GeneID:7385382" /translation="MPAPAPPVNTNPRQLQLLDEVRLRKSLSVEQLADILGVTLQTVR RDVQRLAELGLVSRFHGGVRMPSSTVENLAYTQREALNSTGKARIARAVAAQVPDNCS LILNIGTTTEAIAKALLHHKGLRVLTNNLNVAAILCANPDCEVIVAGGVVRKRDRAIV GEAAVDFIRQFRVDIALIGISGIEPDGSLRDYDMREVKVAQTIIEHAREVWLAADHTK FNRPAMVQLAQLAQIDRLFTDAPPPEPFPALLHEAGVQCTVAAA" gene 388030..389124 /locus_tag="Dtpsy_0375" /db_xref="GeneID:7385383" CDS 388030..389124 /locus_tag="Dtpsy_0375" /note="PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: dac:Daci_1025 ABC transporter related" /codon_start=1 /inference="protein motif:PFAM:PF00005" /transl_table=11 /product="ABC transporter related" /protein_id="YP_002551859.1" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR013611" /db_xref="InterPro:IPR017871" /db_xref="GI:222109595" /db_xref="GeneID:7385383" /translation="MELILDGITKRVGPQVWLHGMGLRLHSDAVTVLLGATQAGKTSL MRIMAGLDRPTEGRVRVDGVDVTGVPVRERNVAMVYQQFINYPSLTVADNIASPLKLR GDKNVAARVRELAERLHITPFLDRLPSELSGGQQQRVALARALAKGAPLMLLDEPLVN LDYKLREELREELSQLFAAGGSTVVYATTEPGEALLLGGYTAVLHEGELLQYGPTAEV FHAPRSLRVARAFSDPPMNLLPAQPVPGGVQLAGGSVLALRHPLQAPAGGTLTVGLRA SALRLAQRAGDVAVQGVVELAEISGSDTFVHAATPWGALVAQVTGVHYLELGSAVTLY LDPAQAYVFGADGALALAPVRASERAQGGH" gene 389126..390196 /locus_tag="Dtpsy_0376" /db_xref="GeneID:7385384" CDS 389126..390196 /locus_tag="Dtpsy_0376" /note="PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: ajs:Ajs_0385 ABC transporter related" /codon_start=1 /inference="protein motif:PFAM:PF00005" /transl_table=11 /product="ABC transporter related" /protein_id="YP_002551860.1" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR005116" /db_xref="InterPro:IPR013611" /db_xref="GI:222109596" /db_xref="GeneID:7385384" /translation="MARIELNLAHSYKPRPQQDSDYALLPLDMVFDDGGAYALLGPSG CGKTTMLNIMSGLLVPSQGQVRFDGRDVTRASPQERNIAQVFQFPVIYDTMTVAENLA FPLKNRKVPEAHIRQRVGKIAEMLEMSGQLDQRAAGLSADAKQKISLGRGLVREDVAA VLFDEPLTVIDPHLKWQLRRKLKQIHHELKLTLIYVTHDQVEALTFADQVVVMTRGRV VQMGTPGDLFERPQHAFVGHFIGSPGMNFLPAQVQGGEITVAAQRWALPRALPEGAVQ LGVRPEYLALADAHAPGALRCTVARVQDVGTHQMLTATVEGQSLKARFAPEQALPAPG EAVWLQVLGEHTCFYKNEELLP" gene 390193..390345 /locus_tag="Dtpsy_0377" /db_xref="GeneID:7385385" CDS 390193..390345 /locus_tag="Dtpsy_0377" /codon_start=1 /inference="ab initio prediction:Prodigal:1.4" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551861.1" /db_xref="GI:222109597" /db_xref="GeneID:7385385" /translation="MNGYPLSRCAASPWKGDGALCCGAALAGRPAVCAAPVVRVAGYP LEHCHE" sig_peptide 390193..390297 /locus_tag="Dtpsy_0377" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.625) with cleavage site probability 0.624 at residue 35" gene 390338..391234 /locus_tag="Dtpsy_0378" /db_xref="GeneID:7385386" CDS 390338..391234 /locus_tag="Dtpsy_0378" /note="PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_0386 binding-protein-dependent transport systems inner membrane component" /codon_start=1 /inference="protein motif:PFAM:PF00528" /transl_table=11 /product="binding-protein-dependent transport systems inner membrane component" /protein_id="YP_002551862.1" /db_xref="InterPro:IPR000515" /db_xref="GI:222109598" /db_xref="GeneID:7385386" /translation="MSSTTKPVNQKAWFLVLPVILCVAFSAILPLMTVVNYSVQDIIS PERRVFVGTEWFAAVLRDEELHGALVRQLTFSLAVLLVEIPLGILLALSMPAQGWKSS AVLVIVALSLLIPWNVVGTIWQIFGRSDIGLLGAAFEAIGFDYSYTGNATHAWLTVLA MDVWHWTPLVALLCFAGLRSIPDAYYQAARIDGASKFAVFRYIQLPKMRGVLMIAVLL RFMDSFMIYTEPFVLTGGGPGNATTFLSQYLTQKAVGQFDLGPAAAFSLIYFLIILLL CFILYNWMQRVGTTPKEGAGHE" sig_peptide 390338..390418 /locus_tag="Dtpsy_0378" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.903) with cleavage site probability 0.494 at residue 27" gene 391227..392039 /locus_tag="Dtpsy_0379" /db_xref="GeneID:7385387" CDS 391227..392039 /locus_tag="Dtpsy_0379" /note="PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_0387 binding-protein-dependent transport systems inner membrane component" /codon_start=1 /inference="protein motif:PFAM:PF00528" /transl_table=11 /product="binding-protein-dependent transport systems inner membrane component" /protein_id="YP_002551863.1" /db_xref="InterPro:IPR000515" /db_xref="GI:222109599" /db_xref="GeneID:7385387" /translation="MNEPRFQKRTLFLIAYLVFAVLPIYWMVNMSFKTNEEILSSFSL WPQHFTWANYQTIFTDESWYSGYINSLIYVAINTVISLTVALPAAYAFSRYQFLGDKH VFFWLLTNRMTPPAVFLLPFFQLYTTVGLMDTHIAVALAHLLFNVPLAVWILEGFMSG IPREIDETAYIDGYSFPRFFLTIFLPLIKAGVGVAAFFCFMFSWVELLLARTLTSVNA KPIVATMTRTVSASGMDWATLAAAGVLTIVPGAIVIWFVRHYIAKGFAMGRV" gene 392052..392360 /locus_tag="Dtpsy_0380" /db_xref="GeneID:7385388" CDS 392052..392360 /locus_tag="Dtpsy_0380" /note="KEGG: ajs:Ajs_0388 putative integral membrane protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0388" /transl_table=11 /product="putative integral membrane protein" /protein_id="YP_002551864.1" /db_xref="GI:222109600" /db_xref="GeneID:7385388" /translation="MFDWMAWTTPVAVFFTCIVLMLIGMTVWEIQSPTVERKGFLPMT TTRGDRLFIGLLTAAYINLAWVGLGEKMAQWFSLEAEPSVWISFVLSMLVLALVLRKG " gene 392534..394267 /locus_tag="Dtpsy_0381" /db_xref="GeneID:7385389" CDS 392534..394267 /locus_tag="Dtpsy_0381" /note="KEGG: ajs:Ajs_0389 extracellular solute-binding protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0389" /transl_table=11 /product="extracellular solute-binding protein" /protein_id="YP_002551865.1" /db_xref="GI:222109601" /db_xref="GeneID:7385389" /translation="MKMQFKAIAFAAAALALGQAAWAGEAEAKKWIDSEFQPSTLSKD QQMAEMKWFIDAAKKLQAKGVKEIAVVSETITTHEYESKTLAKAFSEITGIQVKHDLI QEGDVVEKLQTSMQSGKSIYDGWISDSDLIGTHYRYGKILNLSDYMAGPGKDYTNPGL DLQDFIGTKFTTAPDGKLYQLPDQQFANLYWFRADLFDRKDLKDKFKAKYGYDLGVPL NWSAYEDIAEFFTNDVKQIDGKPIYGHMDYGKKDPSLGWRFTDAWLSMAGSADIGTPN GLPIDEWGIRVADDKCTPVGASVARGGATNSPAAVYALTKYVDWMKKYAPKEAMGMTF GEAGPVPAQGQIAQQIFWYTAFTADMTKPGLPVVNADGTPKWRMAPGPNGPYWKQGMQ NGYQDVGSWTFFKDHNPDRLAAAWLYAQFVTAKSTSLKKTVVGLTPIRESDIRSKAMT DMAPKLGGLVEFYRSPARVAWSPTGTNVPDYPKLAQLWWKNVAQAVTGEKTPQAAMDT LADEMDQVMARLQRAGMERCAPKLNAKGDPAKWLSDQHAPWKKLANEKPKGETINYNT LLQAWKDGKVR" sig_peptide 392534..392605 /locus_tag="Dtpsy_0381" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.998 at residue 24" gene 394369..395967 /locus_tag="Dtpsy_0382" /db_xref="GeneID:7385390" CDS 394369..395967 /locus_tag="Dtpsy_0382" /note="PFAM: FAD dependent oxidoreductase; KEGG: ajs:Ajs_0390 FAD dependent oxidoreductase" /codon_start=1 /inference="protein motif:PFAM:PF01266" /transl_table=11 /product="FAD dependent oxidoreductase" /protein_id="YP_002551866.1" /db_xref="InterPro:IPR000447" /db_xref="InterPro:IPR006076" /db_xref="GI:222109602" /db_xref="GeneID:7385390" /translation="MTSDTSTPLATVRADLLARLAQPVTYDLAVVGGGATGLGVALDA AARGFSVVLLESHDFAKGTSSRATKLVHGGVRYLAQGNIALVREALHERTTLLRNAPH LAQPLAFVMPSYKVWETPFYGVGLKMYDALAGKAGLGPTEFLGRMETLRCLPTAMADG LKGGVKYWDGQFDDARLALALARTAAQRGALLLNYCPVDDLLYDGGKVAGVVCQDAET GQRYEVRARCVVNATGVWVDALRQRDGDVSGQPAKPMVAPSQGVHIVVDREFLPSDHA LMVPKTADGRVLFAVPWLGKVILGTTDSPRQDLAREPQAMREEVAFILGESARYLRRA PQASDVRSIWVGLRPLVKPSDEDAAATKSISREHTVLASRSGLVTVTGGKWTTYRAMA EDVLLKCMDEHLLPRRPGGITVALPLVGAGATRERQGMNAPQGLHSYGDEAARVQALP GSQVQLAEGLSEAMVRFAARHEYARTVEDVLARRSRVLFLDARLAAALAPRVADILRE EIPGQDPQLPAFLELAAHYATVPV" gene 396159..396527 /locus_tag="Dtpsy_0383" /db_xref="GeneID:7385391" CDS 396159..396527 /locus_tag="Dtpsy_0383" /note="TIGRFAM: ribosomal protein L14; PFAM: ribosomal protein L14b/L23e; KEGG: ajs:Ajs_0391 50S ribosomal protein L14P" /codon_start=1 /inference="protein motif:TFAM:TIGR01067" /transl_table=11 /product="ribosomal protein L14" /protein_id="YP_002551867.1" /db_xref="InterPro:IPR000218" /db_xref="InterPro:IPR005745" /db_xref="GI:222109603" /db_xref="GeneID:7385391" /translation="MIQTESRLDVADNTGAKSVLCIKVLGGSKRRYASVGDIIKVSVK EAAPRGRVKKGEVYSAVVVRTAKGIRRGDGSLVKFDGNAAVLLNSKLEPIGTRIFGPV TRELRTERFMKIVSLAPEVL" gene 396538..396858 /locus_tag="Dtpsy_0384" /db_xref="GeneID:7385392" CDS 396538..396858 /locus_tag="Dtpsy_0384" /note="TIGRFAM: ribosomal protein L24; SMART: KOW domain protein; KEGG: ajs:Ajs_0392 50S ribosomal protein L24P" /codon_start=1 /inference="protein motif:TFAM:TIGR01079" /transl_table=11 /product="ribosomal protein L24" /protein_id="YP_002551868.1" /db_xref="InterPro:IPR003256" /db_xref="InterPro:IPR005824" /db_xref="InterPro:IPR005825" /db_xref="GI:222109604" /db_xref="GeneID:7385392" /translation="MNKIRKGDEVIVLTGRDKGKRGTVSLRKDDSHLVIEGINLVKKH VKPNPMKGTTGGIVEKAMPIHQSNVAIFNAATGKADRVGIKVQADGTRVRVFKSSGAE IKAA" gene 396868..397407 /locus_tag="Dtpsy_0385" /db_xref="GeneID:7385393" CDS 396868..397407 /locus_tag="Dtpsy_0385" /note="PFAM: ribosomal protein L5; KEGG: ajs:Ajs_0393 50S ribosomal protein L5" /codon_start=1 /inference="protein motif:PFAM:PF00281" /transl_table=11 /product="ribosomal protein L5" /protein_id="YP_002551869.1" /db_xref="InterPro:IPR002132" /db_xref="GI:222109605" /db_xref="GeneID:7385393" /translation="MARLQEIYRDKIAPELVKQFGYTSPMQVPRLTKITLNMGVSEAV ADKKIMDNAVADLTKIAGQKPVVTKAKKAIAGFKIREGQAIGCMVTLRGAQMYEFLDR FVTIALPRVRDFRGISGRAFDGRGNYNIGVKEQIIFPEIEYDKVDALRGLNISITTTA KTDEEAKALLTAFRFPFKN" gene 397417..397722 /locus_tag="Dtpsy_0386" /db_xref="GeneID:7385394" CDS 397417..397722 /locus_tag="Dtpsy_0386" /note="PFAM: ribosomal protein S14; KEGG: ajs:Ajs_0394 SSU ribosomal protein S14P" /codon_start=1 /inference="protein motif:PFAM:PF00253" /transl_table=11 /product="ribosomal protein S14" /protein_id="YP_002551870.1" /db_xref="InterPro:IPR001209" /db_xref="GI:222109606" /db_xref="GeneID:7385394" /translation="MAKVALIQRELKREKLAAKYAAKYAELKAIAGDAKRSDEEREAA RLGLQKLPRNANPTRQRNRCEITGRPRGTFRQFGLGRAKIRELAFAGDIPGVTKASW" gene 397743..398138 /locus_tag="Dtpsy_0387" /db_xref="GeneID:7385395" CDS 397743..398138 /locus_tag="Dtpsy_0387" /note="PFAM: ribosomal protein S8; KEGG: ajs:Ajs_0395 SSU ribosomal protein S8P" /codon_start=1 /inference="protein motif:PFAM:PF00410" /transl_table=11 /product="ribosomal protein S8" /protein_id="YP_002551871.1" /db_xref="InterPro:IPR000630" /db_xref="GI:222109607" /db_xref="GeneID:7385395" /translation="MSMSDPIADLLTRIRNAQMVSKATVSVPSSKVKVAIAQVLKDEG YIDGFEVKSESGKTELEITLKYYAGRPVIERIERVSRPGLRVYKGCGSIPQVMNGLGV AIVTTPKGVMTDRKARATGVGGEVLCYVA" gene 398163..398696 /locus_tag="Dtpsy_0388" /db_xref="GeneID:7385396" CDS 398163..398696 /locus_tag="Dtpsy_0388" /note="TIGRFAM: ribosomal protein L6 signature 1; PFAM: ribosomal protein L6; KEGG: ajs:Ajs_0396 50S ribosomal protein L6P" /codon_start=1 /inference="protein motif:TFAM:TIGR03654" /transl_table=11 /product="ribosomal protein L6 signature 1" /protein_id="YP_002551872.1" /db_xref="InterPro:IPR000702" /db_xref="InterPro:IPR002358" /db_xref="GI:222109608" /db_xref="GeneID:7385396" /translation="MSRVGKSPVSIPAGVDVSIKDDQISVKGAGGVLSLAQNALVKVS NNEGKLSFEPVNDSREANAMSGTVRQLVNNMVVGVSKGFEKKLTLIGVGFKAAASGNK LNLAIGFSHPVNFEMPTGITVATPTPTEIVIKGADRQVVGQLAAEIRAVRPPEPYKGK GIRYADEKVTIKETKKK" gene 398708..399073 /locus_tag="Dtpsy_0389" /db_xref="GeneID:7385397" CDS 398708..399073 /locus_tag="Dtpsy_0389" /note="TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E; KEGG: ajs:Ajs_0397 50S ribosomal protein L18P" /codon_start=1 /inference="protein motif:TFAM:TIGR00060" /transl_table=11 /product="ribosomal protein L18" /protein_id="YP_002551873.1" /db_xref="InterPro:IPR004389" /db_xref="InterPro:IPR005484" /db_xref="GI:222109609" /db_xref="GeneID:7385397" /translation="MLTKKEQRLRRARQTRIRIAQQGVARLTVNRTNLHIYASVISGD GSKVLASASTAEADVRKSLGGSGKGGNAAAAQIIGKRIAEKAKAAGVEKVAFDRAGFA YHGRVKALADAAREAGLQF" gene 399091..399612 /locus_tag="Dtpsy_0390" /db_xref="GeneID:7385398" CDS 399091..399612 /locus_tag="Dtpsy_0390" /note="TIGRFAM: ribosomal protein S5; PFAM: ribosomal protein S5 domain protein; Ribosomal protein S5; KEGG: ajs:Ajs_0398 30S ribosomal protein S5" /codon_start=1 /inference="protein motif:TFAM:TIGR01021" /transl_table=11 /product="ribosomal protein S5" /protein_id="YP_002551874.1" /db_xref="InterPro:IPR005324" /db_xref="InterPro:IPR005712" /db_xref="InterPro:IPR013810" /db_xref="GI:222109610" /db_xref="GeneID:7385398" /translation="MAKFQPKVQSEGQDDGLREKMIAVNRVTKVVKGGRILGFAALTV VGDGDGRVGMGKGKSKEVPAAVQKAMEEARRNMVKVSLKNGTIHHNVTGHHGAAVVMM APAPKGTGIIAGGPMRAVFEVMGITDIVAKSHGSSNPYNMVRATFDALTNSTTPAEVA AKRGKTVEDLFAA" gene 399627..399809 /locus_tag="Dtpsy_0391" /db_xref="GeneID:7385399" CDS 399627..399809 /locus_tag="Dtpsy_0391" /note="TIGRFAM: ribosomal protein L30; PFAM: ribosomal protein L30; KEGG: ajs:Ajs_0399 50S ribosomal protein L30P" /codon_start=1 /inference="protein motif:TFAM:TIGR01308" /transl_table=11 /product="ribosomal protein L30" /protein_id="YP_002551875.1" /db_xref="InterPro:IPR000517" /db_xref="InterPro:IPR005996" /db_xref="GI:222109611" /db_xref="GeneID:7385399" /translation="MTTQQTIKIQLVRSPIGTKESHRATVRGLGLRKLNSISELKDTP EVRGMINKISYLVKVL" gene 399820..400251 /locus_tag="Dtpsy_0392" /db_xref="GeneID:7385400" CDS 399820..400251 /locus_tag="Dtpsy_0392" /note="TIGRFAM: ribosomal protein L15; PFAM: ribosomal protein L15; KEGG: ajs:Ajs_0400 50S ribosomal protein L15P" /codon_start=1 /inference="protein motif:TFAM:TIGR01071" /transl_table=11 /product="ribosomal protein L15" /protein_id="YP_002551876.1" /db_xref="InterPro:IPR001196" /db_xref="InterPro:IPR005749" /db_xref="GI:222109612" /db_xref="GeneID:7385400" /translation="MELNSIKPADGAKHAARRVGRGIGSGLGKTAGRGHKGQKSRSGG YHKVGFEGGQMPLQRRLPKRGFKSHLLKFNAEISLTALENLGLAEVDVLALKNAGLVG ELAKVVKVIKSGEISKAVKLSGITATAGAKAAIEAAGGSLA" gene 400275..401594 /locus_tag="Dtpsy_0393" /db_xref="GeneID:7385401" CDS 400275..401594 /locus_tag="Dtpsy_0393" /note="TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein; KEGG: ajs:Ajs_0401 preprotein translocase subunit SecY" /codon_start=1 /inference="protein motif:TFAM:TIGR00967" /transl_table=11 /product="preprotein translocase, SecY subunit" /protein_id="YP_002551877.1" /db_xref="InterPro:IPR002208" /db_xref="GI:222109613" /db_xref="GeneID:7385401" /translation="MATNAAQLAKTGKFGDLRRRLVFLLLALVVYRIGAHIPVPGIDP AQLQQLFSGQQGGILNLFNMFSGGALSRFTVFALGIMPYISASIIMQLMTYVVPTFEQ LKKEGEAGRRKITQYTRYGTLGLAIFQSLGIAVALESSAGLVLSPGFGFRLTAVVSLT AGTMFLMWLGEQITERGLGNGISILIFAGIAAGLPSSIGGLLELVRTGAMSILAAIFI VIVVGLVTYFVVFVERGQRKILVNYARRQVGNKVYGGQSSHLPLKLNMAGVIPPIFAS SIILLPATIVNWFSAGESMRWLRDISAALTPGQPVYVMFYAAAIIFFCFFYTALVFNS RETADNLKKSGAFIPGIRPGEHTARYIDKILVRLTLAGAVYITFVCLLPEFLILKYNV PFYFGGTSLLIIVVVTMDFMAQVQNYMMSQQYESLLKKANFKTTLGT" gene 401739..401852 /locus_tag="Dtpsy_0394" /db_xref="GeneID:7385402" CDS 401739..401852 /locus_tag="Dtpsy_0394" /note="TIGRFAM: ribosomal protein L36; PFAM: ribosomal protein L36; KEGG: ajs:Ajs_0402 50S ribosomal protein L36P" /codon_start=1 /inference="protein motif:TFAM:TIGR01022" /transl_table=11 /product="ribosomal protein L36" /protein_id="YP_002551878.1" /db_xref="InterPro:IPR000473" /db_xref="GI:222109614" /db_xref="GeneID:7385402" /translation="MRVSASVKKICRNCKIIRRKGVVRVICTDQRHKQRQG" gene 401876..402241 /locus_tag="Dtpsy_0395" /db_xref="GeneID:7385403" CDS 401876..402241 /locus_tag="Dtpsy_0395" /note="TIGRFAM: ribosomal protein S13; PFAM: ribosomal protein S13; KEGG: ajs:Ajs_0403 30S ribosomal protein S13" /codon_start=1 /inference="protein motif:TFAM:TIGR03631" /transl_table=11 /product="ribosomal protein S13" /protein_id="YP_002551879.1" /db_xref="InterPro:IPR001892" /db_xref="GI:222109615" /db_xref="GeneID:7385403" /translation="MARIAGINIPPHQHTEIGLTAIYGIGRTRARKICEACGIAYSKK VKELTDADLEKIRDQIAQFTIEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPMRGQRT RTNARTRKGPRKGAAALKK" gene 402259..402663 /locus_tag="Dtpsy_0396" /db_xref="GeneID:7385404" CDS 402259..402663 /locus_tag="Dtpsy_0396" /note="TIGRFAM: ribosomal protein S11; PFAM: ribosomal protein S11; KEGG: ajs:Ajs_0404 30S ribosomal protein S11" /codon_start=1 /inference="protein motif:TFAM:TIGR03632" /transl_table=11 /product="ribosomal protein S11" /protein_id="YP_002551880.1" /db_xref="InterPro:IPR001971" /db_xref="GI:222109616" /db_xref="GeneID:7385404" /translation="MAKSPANNAAQRVRKKVRKNISDGIAHVHASFNNTIITITDRQG NALSWASSGGQGFKGSRKSTPFAAQVASEVAGRAAIEQGIKNLDVEIKGPGPGRESSV RALGALGIRITSISDVTPVPHNGCRPQKRRRI" gene 402752..403375 /locus_tag="Dtpsy_0397" /db_xref="GeneID:7385405" CDS 402752..403375 /locus_tag="Dtpsy_0397" /note="KEGG: ajs:Ajs_0405 30S ribosomal protein S4; TIGRFAM: ribosomal protein S4; PFAM: ribosomal protein S4; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein" /codon_start=1 /inference="protein motif:TFAM:TIGR01017" /transl_table=11 /product="ribosomal protein S4" /protein_id="YP_002551881.1" /db_xref="InterPro:IPR001912" /db_xref="InterPro:IPR002942" /db_xref="InterPro:IPR005709" /db_xref="GI:222109617" /db_xref="GeneID:7385405" /translation="MARYLGPKAKLSRREGTDLFLKSARRSIADKAKFDSKPGQHGRT SGARTSDYGLQLREKQKVKRMYGVLEKQFRRYFEAAERLKGNTGANLLGLLECRLDNV VYRMGFGSTRAEARQLVSHKAITVNGQSVNIASYLVKAGDVVAVREKSKKQARIVEAL QLAQQVGMPVWVEVNADKVEGTFKKVPDRDEFGADINESLIVELYSR" gene 403487..404479 /locus_tag="Dtpsy_0398" /db_xref="GeneID:7385406" CDS 403487..404479 /locus_tag="Dtpsy_0398" /note="KEGG: ajs:Ajs_0406 DNA-directed RNA polymerase subunit alpha; TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase alpha subunit domain protein; RNA polymerase dimerisation; RNA polymerase insert; SMART: RNA polymerase RpoA/D/Rpb3-type" /codon_start=1 /inference="protein motif:TFAM:TIGR02027" /transl_table=11 /product="DNA-directed RNA polymerase, alpha subunit" /protein_id="YP_002551882.1" /db_xref="InterPro:IPR011260" /db_xref="InterPro:IPR011261" /db_xref="InterPro:IPR011262" /db_xref="InterPro:IPR011263" /db_xref="InterPro:IPR011773" /db_xref="GI:222109618" /db_xref="GeneID:7385406" /translation="MQTNLLKPKAINVEQLGPNRAKVALEPFERGYGHTLGNAIRRVL LSSMVGYAATEVTIAGVLHEYSSIDGVQEDVVNILLNLKGVVFKLHNRDEVTLSLRKD GEGVVTARDIQTPHDVEIVNPEHVIATLSAGGKLDMQIKVEKGRGYVPGNLRRYADEA TKSIGRIVLDASFSPVKRVSYTVESARVEQRTDLDKLVVEIETNGAITAEDAVRASAK ILVEQLAVFAQLEGGELAAFDAPASSRGAATFDPILLRPVDELELTVRSANCLKAENI YYIGDLIQRTENELLKTPNLGRKSLNEIKEVLASRGLTLGMKLENWPPAGLDKR" gene 404569..404958 /locus_tag="Dtpsy_0399" /db_xref="GeneID:7385407" CDS 404569..404958 /locus_tag="Dtpsy_0399" /note="TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17; KEGG: ajs:Ajs_0407 50S ribosomal protein L17P" /codon_start=1 /inference="protein motif:TFAM:TIGR00059" /transl_table=11 /product="ribosomal protein L17" /protein_id="YP_002551883.1" /db_xref="InterPro:IPR000456" /db_xref="GI:222109619" /db_xref="GeneID:7385407" /translation="MRHGHGLRKLNRTSSHRLAMLQNMMNSLIEHEAIKTTLPKAKEL RRVIEPMITLAKEDSVANRRLAFNRLRDRDSVTKLFNDLGPRFKTRPGGYTRILKMGF RVGDNAPMAYVELVDRAETPEVSSTEA" gene 404983..405059 /locus_tag="Dtpsy_R0002" /note="tRNA-Met1" /db_xref="GeneID:7385408" tRNA 404983..405059 /locus_tag="Dtpsy_R0002" /product="tRNA-Met" /db_xref="GeneID:7385408" gene complement(405209..406549) /locus_tag="Dtpsy_0400" /db_xref="GeneID:7385409" CDS complement(405209..406549) /locus_tag="Dtpsy_0400" /EC_number="1.1.1.22" /note="KEGG: ajs:Ajs_0408 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase" /codon_start=1 /inference="protein motif:TFAM:TIGR03026" /transl_table=11 /product="nucleotide sugar dehydrogenase" /protein_id="YP_002551884.1" /db_xref="InterPro:IPR001732" /db_xref="InterPro:IPR014026" /db_xref="InterPro:IPR014027" /db_xref="InterPro:IPR017476" /db_xref="GI:222109620" /db_xref="GeneID:7385409" /translation="MKVTVFGTGYVGLVQGAVLADVGHDVICVDVDAAKVAALQAGRI PIHEPGLEPLVQANQAAGRLRFTTDAAQGVAHGELIFLAVGTPPDEDGSADLQHVLAV ARTIATHMTAPKTIVNKSTVPVGTADKVADTVRKVLETRGVALAFEVVSNPEFLKEGA AVADCKRPDRIVIGTRAPQAERQLRELYAPFNRNHDRIVMMDVRSAELTKYAANAMLA TKISFINEMANLAEQLGADIEDVRRGLGSDPRIGYHFIYPGVGYGGSCFPKDVKALIH TAQSIGFTPDLLLAVESRNDAQRQLLARRIIAHYGGNLRGKTIAVWGLAFKPETDDMR EAPSRYLLQSLWAAGAQVRAHDPAAMDEARRIFGERDDLVLCGSPTEALEGADALAIV TEWKIFRVPDFAQMAHALHDRMVFDGRNLYDPETITRFGLGYVSIGRAPVVGMS" gene complement(406546..407556) /locus_tag="Dtpsy_0401" /db_xref="GeneID:7383988" CDS complement(406546..407556) /locus_tag="Dtpsy_0401" /note="PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: ajs:Ajs_0409 NAD-dependent epimerase/dehydratase" /codon_start=1 /inference="protein motif:PFAM:PF01370" /transl_table=11 /product="NAD-dependent epimerase/dehydratase" /protein_id="YP_002551885.1" /db_xref="InterPro:IPR001509" /db_xref="InterPro:IPR002198" /db_xref="InterPro:IPR002225" /db_xref="InterPro:IPR005913" /db_xref="InterPro:IPR008089" /db_xref="InterPro:IPR013120" /db_xref="GI:222109621" /db_xref="GeneID:7383988" /translation="MSVTLVTGCAGFIGMHCAQRLLERGERVVGIDNLNAYYDVGLKH ARLGRLHGQGDFTFEQIDVADRDAMHALFARVRPHRVLHLAAQAGVRYSIDQPDDYTD SNLLGFGNILQGCRAQQVEHLVFASSSSVYGGNAKLPFSERDAVDHPVSYYAATKKAN EVMAHAYAHLYGIPTTGLRFFTVYGPWGRPDMALFKFTRAMLAGETIDVYGEGQLVRD FTYIDDIVEGVLRVLDKPATPDAAFDPLSPSPGTGLAPYRIFNIGNSAPTLLMDYIHA LEEALGMVALKRMLPLQPGDMHSTAADMAALASWVGFAPHTPVRDGVARFVHWYKDFY PS" gene complement(407553..409070) /locus_tag="Dtpsy_0402" /db_xref="GeneID:7383989" CDS complement(407553..409070) /locus_tag="Dtpsy_0402" /note="KEGG: ajs:Ajs_0410 glycosyltransferase" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0410" /transl_table=11 /product="glycosyltransferase" /protein_id="YP_002551886.1" /db_xref="InterPro:IPR000812" /db_xref="GI:222109622" /db_xref="GeneID:7383989" /translation="MTASTAPRALSSRLPWTHPLFWFAAISLAHVAMRLLASPALKWD EAEQILWTQELALGYGPQPPLYTWLQWAMNQVFGPSVLALSLLKHGLLALTYSLMYLA GRELLDERGAFWASASMVLMPALGWYSVRDQTHTILVTAMACGAWWLLLRIVRRPRPL DFALLGLVCGFGMLGKYSFALVAGAMLLAALSVPEARRALLSRGWWWAPLVGLLVVLP HAAWLLSHLTEATSGTISKMNIQPENGLVKGLLRLLEGVVPSTLLLWALFALWAFRSA WWQRPLAPVSPPMHRVFVRYLGLVLLALAGMVVFAGVSNFKGRWILPLLCMAPLAAFS ARPELQHHPRARRYTIAVATMAVILLVAAGIRPWFSGLRGEVDELNHPSIELADALRA AGYDGTSPIVASDHMLAGMLRVRFPDALVDACAPGEDEIPTCVADHLRRSEQRGQGLL LISRTDYVPSSWWDQAQARIAPRALQSIHLPFHMVRAGTPQAHYEYIWSPRGTQP" gene 409183..410214 /locus_tag="Dtpsy_0403" /db_xref="GeneID:7383990" CDS 409183..410214 /locus_tag="Dtpsy_0403" /note="PFAM: glycosyl transferase family 2; KEGG: ajs:Ajs_0411 glycosyl transferase family protein" /codon_start=1 /inference="protein motif:PFAM:PF00535" /transl_table=11 /product="glycosyl transferase family 2" /protein_id="YP_002551887.1" /db_xref="InterPro:IPR001173" /db_xref="GI:222109623" /db_xref="GeneID:7383990" /translation="MNTAPTPAPDVSIVVPIYNEVENLPDLVERIAQAMSAQPLSFEL LAVDDGSRDGSADTLRELAATRPWLRPVFLARNYGQSSALQAGFDRVRGRYVVTLDAD LQNEPADIPLLLERLENDSSVDMVSGWRKDRQDAELSRKLPSRIANRLISSATGVHLH DYGCALKAYRRPIIDRIRLYGELHRFIPSLAKEAGARITEVPVRHHARTRGVSKYGID RTFRVILDLILIVFFMRYRQRPLHAFGGLGLWLAAPGVLILAWLLLQKVLGEDIGGRP LLLAGVMLVLMGVQMVVAGLIGELLMRIYHEAGGAPQFHAQEYVPDSRVNMPAARDQK AQAATNNIA" gene 410232..411140 /locus_tag="Dtpsy_0404" /db_xref="GeneID:7383991" CDS 410232..411140 /locus_tag="Dtpsy_0404" /note="KEGG: ajs:Ajs_0412 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0412" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551888.1" /db_xref="GI:222109624" /db_xref="GeneID:7383991" /translation="MLRGLVGLALLGAVVALADPARVWSQLRQAQPGWLLAGLLAGIA SNLVSALRWRALARWLGADASARDACRWYFQAIGLNALLPGAVVGGDVYRAVVLRGTG QDTAASSWSVVLDRLSGLWMLCAIGGLGAAACADVLAPWLRLPRGLFIALMLVGTLLW LALPWCLPALLRSRRFAGGWLAPLREAATRPDFPRQLVWQAGASAAVQLLSAAALAGG GLALGVALPASVWAWAIAPVFLMAALPVSVGGWGTREAAAVAALAPFGVAASAAVGVG VVYGVYGLAQGALGALAFGLPRSAGR" sig_peptide 410232..410288 /locus_tag="Dtpsy_0404" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.997 at residue 19" gene complement(411349..412263) /locus_tag="Dtpsy_0405" /db_xref="GeneID:7383992" CDS complement(411349..412263) /locus_tag="Dtpsy_0405" /note="PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: ajs:Ajs_0413 uroporphyrin-III C/tetrapyrrole methyltransferase" /codon_start=1 /inference="protein motif:PFAM:PF00590" /transl_table=11 /product="Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase" /protein_id="YP_002551889.1" /db_xref="InterPro:IPR000878" /db_xref="InterPro:IPR008189" /db_xref="GI:222109625" /db_xref="GeneID:7383992" /translation="MSAARDAAAAQHYPQGALYVVATPIGNLADITLRALHVLQLADT LACEDTRHTQSLLRAYGIDKPSDRLLALHQHNEAQAAQMVVQQLQAGQRVAYVSDAGT PGVSDPGARLVAAVQAAGLRCIPLPGASSVTSALSVAGAVAPTADSGGFLFAGFLPPK GAERAAAVQRLAAEPRCVVLLEAPHRIAALADTLADLGERPVTLARELTKQFEEVSTH PARELAAWLAGAPQRVKGEFVVLLHPLAATQGDGAEAERVLRLLLDELPTKTAVKLAA DIAHASRNTLYERALQIKRDAEAAGEHG" gene 412287..412685 /locus_tag="Dtpsy_0406" /db_xref="GeneID:7383993" CDS 412287..412685 /locus_tag="Dtpsy_0406" /note="PFAM: protein of unknown function UPF0102; KEGG: ajs:Ajs_0414 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF02021" /transl_table=11 /product="protein of unknown function UPF0102" /protein_id="YP_002551890.1" /db_xref="InterPro:IPR003509" /db_xref="GI:222109626" /db_xref="GeneID:7383993" /translation="MGFLGKKVNGSAPARTTRAAGQAAEDRALAHLTAAGLALVERNY RTPGRGGGEIDLILRERDGTLVFVEVRSRGASAYGGAGGSIGVAKQRRIVFAAQHYLL RWPAPPPCRFDAVLIEGDRLQWLRGAFDAA" gene 412744..413337 /locus_tag="Dtpsy_0407" /db_xref="GeneID:7383994" CDS 412744..413337 /locus_tag="Dtpsy_0407" /note="KEGG: ajs:Ajs_0415 phosphoheptose isomerase" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0415" /transl_table=11 /product="phosphoheptose isomerase" /protein_id="YP_002551891.1" /db_xref="GI:222109627" /db_xref="GeneID:7383994" /translation="MLEQRIQQHFIDSADLKYQSAQALSHPISAAVQAIWACVTNGAK VLACGSGPSSAQALQFAAFCVAGFERDRPELAALALVPDALATGTSAVADSAVLARQV RALGQAGDLLLVITIGGNEPALLQAVQAAHERDMTVVALCGRDGGALGALLHETDVQI CVPHDRAARVREVHALVLHCLCDGVDAQLLGEQEIPL" gene 413334..414008 /locus_tag="Dtpsy_0408" /db_xref="GeneID:7383995" CDS 413334..414008 /locus_tag="Dtpsy_0408" /note="PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: ajs:Ajs_0416 transport-associated" /codon_start=1 /inference="protein motif:PFAM:PF04972" /transl_table=11 /product="transport-associated" /protein_id="YP_002551892.1" /db_xref="InterPro:IPR007055" /db_xref="InterPro:IPR014004" /db_xref="GI:222109628" /db_xref="GeneID:7383995" /translation="MTFPLLRISSAALAAAALAGSLAGCAPLVIGGGAVVGTLMATDR RTTGTQVEDEGIEMRTASRIRETLGDRVHVNVTSYNRQVLLTGEVPTAADGQKVEQIA QGVDNVRSVVNDLGVMPASSLTQRSRDAFISTKVRASLVDAKDLSANAFKVVTERDVV YLMGRVTQREAKRSAEIARGVDGVRKVVRVFEVISEEELIRGGAAQQPAPVSQDPAAA AQPVKP" sig_peptide 413334..413408 /locus_tag="Dtpsy_0408" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.332 at residue 25" gene complement(414106..415035) /locus_tag="Dtpsy_0409" /db_xref="GeneID:7383996" CDS complement(414106..415035) /locus_tag="Dtpsy_0409" /EC_number="1.1.1.31" /note="PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: ajs:Ajs_0417 3-hydroxyisobutyrate dehydrogenase" /codon_start=1 /inference="protein motif:PRIAM:1.1.1.31" /transl_table=11 /product="3-hydroxyisobutyrate dehydrogenase" /protein_id="YP_002551893.1" /db_xref="InterPro:IPR002204" /db_xref="InterPro:IPR004455" /db_xref="InterPro:IPR006115" /db_xref="InterPro:IPR006183" /db_xref="GI:222109629" /db_xref="GeneID:7383996" /translation="MSSSINPRTYDPVPARRVAFLGLGVMGYPMAGHLASAGHTVTVY NRTATKSEAWCAEFKGVATVKHAKTPREAAQGADIVFCCVGNDDDLRSVVLGADGAFA GMQQGAVFVDHTTASAAVARELYGAARTLGLQFIDAPVSGGQAGAQNGQLTVMCGGDA AAFDAVRPTAMAFSRAFTRIGDSGAGQLAKMVNQICIAGLVQGLSEAIAFGQHAGLDM PLVLDVIGKGAAQSWQMDNRGKTMVEGRFDFGFAVDWMRKDLGLVLDEAKRNGARLPV TALVDQFYADVQRAGGNRWDTSSLITRLAPKKD" gene complement(415099..416235) /locus_tag="Dtpsy_0410" /db_xref="GeneID:7383997" CDS complement(415099..416235) /locus_tag="Dtpsy_0410" /note="TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: ajs:Ajs_0418 twitching motility protein" /codon_start=1 /inference="protein motif:TFAM:TIGR01420" /transl_table=11 /product="twitching motility protein" /protein_id="YP_002551894.1" /db_xref="InterPro:IPR001482" /db_xref="InterPro:IPR006321" /db_xref="GI:222109630" /db_xref="GeneID:7383997" /translation="MERDQASKFINDLLKLMVSRGGSDLFITAEFPPAIKVDGKVTKV SPQPLTPNHTLTLARAIMSDKQVADFERTKECNFAISPAGVGRFRVNAFVQQGRVGMV LRTIPLTLPTIDGLGVPQVLKEVTMTKRGLCILVGATGSGKSTTLAAMLDWRNENSFG HIITVEDPVEFVHPHKNCVITQREVGLDTDSWEAALKNTLRQAPDVILMGEIRDRETM EHAVAFAETGHLCLATLHANSANQALDRIINFFPEERRAQLLMDLSLNLKALISQRLI PKQDGKGRAAAVEVMLNTPLIADLIFKGEVAEIKEIMKKSRNLGMQTFDQALFDLFEA NVISYEDALRNADSVNDLRLQIKLSSQRAKTTDLASGTEHFAIV" gene complement(416282..416911) /locus_tag="Dtpsy_0411" /db_xref="GeneID:7383998" CDS complement(416282..416911) /locus_tag="Dtpsy_0411" /note="PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: ajs:Ajs_0419 cyclic nucleotide-binding protein" /codon_start=1 /inference="protein motif:PFAM:PF00027" /transl_table=11 /product="cyclic nucleotide-binding protein" /protein_id="YP_002551895.1" /db_xref="InterPro:IPR000595" /db_xref="GI:222109631" /db_xref="GeneID:7383998" /translation="MKGILGLLKSKNRKSGEESTDSVFFTTAFAGQGVEQSQLVPWEA RAVEVDVKRLPQSRGGRLLQSLWSKDKYMAHLDHDAVERMERFFEFASVAPNRDLIRQ DEYGNFMVVLLTGTIAVDRVQPWGEQLRLAETRPGDILGEMSLLDSGIRFSACTTLTE CEIAVLSAEALDEMMAHDPQLAASLVALLARKLSQRLRVVSARLSENQR" gene complement(416988..418031) /locus_tag="Dtpsy_0412" /db_xref="GeneID:7383999" CDS complement(416988..418031) /locus_tag="Dtpsy_0412" /note="KEGG: ajs:Ajs_0420 twitching motility protein; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase" /codon_start=1 /inference="protein motif:TFAM:TIGR01420" /transl_table=11 /product="twitching motility protein" /protein_id="YP_002551896.1" /db_xref="InterPro:IPR001482" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR006321" /db_xref="GI:222109632" /db_xref="GeneID:7383999" /translation="MDITQLLAFSVKNKASDLHLSAGLPPMIRVHGDVRRINVDALDH KTVHAMVYDIMSDAQRKTYEEFLEVDFSFEIDGLARFRVNAFNQNRGAAAVFRTIPSK ILTLEQLNAPKIFADLALKPRGLVLVTGPTGSGKSTTLAAMVNYLNESEYGHILTVED PIEFVHESKKCLINQREVGPMTLSFAAALKSALREDPDAILVGEMRDLETIRLAMTAA ETGHLVFGTLHTSSAAKTIDRIIDVFPAEEKEMVRAMLSESLQAVISQTLCKTKDGSG RVAAHEIMLGTSAIRNLIREAKVAQMYSTIQTSNSVGMQTLDQNLSDLVRRNIISPAE ARSKAKIPENFPG" gene 418071..418787 /locus_tag="Dtpsy_0413" /db_xref="GeneID:7384000" CDS 418071..418787 /locus_tag="Dtpsy_0413" /note="PFAM: alanine racemase domain protein; KEGG: ajs:Ajs_0421 alanine racemase domain-containing protein" /codon_start=1 /inference="protein motif:PFAM:PF01168" /transl_table=11 /product="alanine racemase domain protein" /protein_id="YP_002551897.1" /db_xref="InterPro:IPR001608" /db_xref="InterPro:IPR011078" /db_xref="GI:222109633" /db_xref="GeneID:7384000" /translation="MTTIASNLQNVRERIARACAAAGRPPDAVALLAVSKTFGPEAVR DAALAGQRRFGENYIQEAVEKMALVAALGLPQALEWHCIGPVQSNKTRLVAQHFDWVH TVDRPKTAQRLSDQRPDNLPALQVCIQVNVDGGATKAGVPAEEALALAQAVAALPRLT LRGVMSIPDPAPDEAAQLAVLLRVRQVFDTLRAQGGPGFEAVDTLSLGMTGDLEAAVR AGSTMVRVGSGIFGARHYPA" gene 418826..419962 /locus_tag="Dtpsy_0414" /db_xref="GeneID:7384001" CDS 418826..419962 /locus_tag="Dtpsy_0414" /note="PFAM: aminotransferase class V; aminotransferase class-III; KEGG: ajs:Ajs_0422 aminotransferase, class V" /codon_start=1 /inference="protein motif:PFAM:PF00266" /transl_table=11 /product="aminotransferase class V" /protein_id="YP_002551898.1" /db_xref="InterPro:IPR000192" /db_xref="InterPro:IPR005814" /db_xref="GI:222109634" /db_xref="GeneID:7384001" /translation="MPGLLPDVDPDGLLEFSVVYTDRALNHMSRRFVGVMQDILATLK EVYRAHTAVLVPGSGTFGMEAVARQFANREKVLIVRNGWFSYRWSQIFDAGGLGGGAV VCQARRQGDGPQAPWVPCPASEVAAAIRAERPKVVFAPHVETASGILLPDDYLRTVSD AAHEVGALFVLDCVASGAMWVDMEKTGVDVLISAPQKGWSGSPCCAMVMLSARAREAI EQTQSSSFSCDLKKWMQIAEGYEKGQHAYHTTMPTDALVRLRDVMLETRDYGFAKVRD EQIALGAKVRALLQARGFPSVAAAGYEAPGVVVSYTTDPGIQSGKKFAEAGLQTASGV PLQCGEGADFQTFRLGLFGLEKWHNVDRTVGHLAAALDQVAPAR" gene 420030..421388 /locus_tag="Dtpsy_0415" /db_xref="GeneID:7384002" CDS 420030..421388 /locus_tag="Dtpsy_0415" /note="PFAM: protein of unknown function DUF445; KEGG: ajs:Ajs_0423 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF04286" /transl_table=11 /product="protein of unknown function DUF445" /protein_id="YP_002551899.1" /db_xref="InterPro:IPR007383" /db_xref="GI:222109635" /db_xref="GeneID:7384002" /translation="MLSRMHASPLEPGAQAAASAEPAALAGRASQLSRAKRQATGLLL AVVVVFALTYFFPPSLGVACVRAVAEAAMVGALADWFAVSALFRRIPLPLVQRHTDII ARNKDRIGGNLAVFVRDKFLDAPSLVTMIRRHDPANMLAQWLTAPANARLLGRQVARL ALTALDTVEDAKIQAFLSQAARTLVGKIDLSRSMASALGALTYQGRHQALLDDLLERL GGMVRSEDTRAFVADTLLQWIKREHPLKQKVLPTDWLSGKGASAITHAVDTLLKAVAE DPQHELREALDGAVQRLIARLQTDPDWARRGDEVRGYLQNDEVLGRYVRDLWSDLRQK LRDDLMNEDSALSARVADMGQWLGLSLAGDAALRVRLNVRLELWAATFAPDVAQSVAE HIRATVQRWDAQEMARLVELHIGSDLQYIRINGTVVGGCIGLLLFAVSHAGALWAAVV GS" gene complement(421448..421903) /locus_tag="Dtpsy_0416" /db_xref="GeneID:7384003" CDS complement(421448..421903) /locus_tag="Dtpsy_0416" /note="KEGG: ajs:Ajs_0424 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0424" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551900.1" /db_xref="GI:222109636" /db_xref="GeneID:7384003" /translation="MPVLSPFPFRLPRRLAPLGLCALLASGASAVQAQADSAPRPAVL PPVQTAGALHYQCGGIGTDESTAMRAAMKDYPLSLLFARADGAYEANVDVRITPQGGG DAMQLRAGGPVCLLQLPAGSYRVEVQGAGQNHSRTVQVGRAPQTLDFRF" sig_peptide complement(421796..421903) /locus_tag="Dtpsy_0416" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.543 at residue 36" gene complement(421996..423498) /locus_tag="Dtpsy_0417" /db_xref="GeneID:7384004" CDS complement(421996..423498) /locus_tag="Dtpsy_0417" /note="PFAM: FAD linked oxidase domain protein; KEGG: ajs:Ajs_0425 FAD linked oxidase domain-containing protein" /codon_start=1 /inference="protein motif:PFAM:PF02913" /transl_table=11 /product="FAD linked oxidase domain protein" /protein_id="YP_002551901.1" /db_xref="InterPro:IPR004113" /db_xref="InterPro:IPR006094" /db_xref="GI:222109637" /db_xref="GeneID:7384004" /translation="MAYSHAMPSPTSTERAQRQAEVVQALSACVPQHALLWQPEDTTP YECDGLTAYRQRPLVVCLPETEGEVQAVLKTCHRLGVPVVARGAGTGLSGGAMPHAMG VTLSLAKFNRILDLDPVARTARVQCGVRNLAISEAAAPYNLYYAPDPSSQIACTIGGN VAENSGGVHCLKYGLTVHNVLRVRGYTMEGEPITFGSEALDAPGYDLLAAVIGSEGML AVALEVTVKLVPKPQLARCIMASFDDVRKAGDAVAAVIAAGIIPAGLEMMDKPMTAAV EDFVKAGYDLTAEAILLCESDGTPEEVEEEIARMSEVLRGSGATAISVSTSEEERMRF WSGRKNAFPASGRISPDYMCMDSTIPRKRLADILLAIQEMEKKYQLRCCNVFHAGDGN LHPLILFDANDPDQLHRCELFGADILETSVAMGGTVTGEHGVGVEKLNSMCAQFTVEE NAQMFALKEAFDPQGLLNPGKVIPTLNRCAEYGKMLVRNGKMSHANLPRF" gene complement(423656..424576) /locus_tag="Dtpsy_0418" /db_xref="GeneID:7384005" CDS complement(423656..424576) /locus_tag="Dtpsy_0418" /note="PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_0647 transcriptional regulator, LysR family" /codon_start=1 /inference="protein motif:PFAM:PF03466" /transl_table=11 /product="transcriptional regulator, LysR family" /protein_id="YP_002551902.1" /db_xref="InterPro:IPR000847" /db_xref="InterPro:IPR005119" /db_xref="GI:222109638" /db_xref="GeneID:7384005" /translation="MATQSLSIAAKAALDAASLRRIPPIQCLLTFEALARLRSVTQTA DELCVTPSAVSHRVKQLEQILGTRLFGRADFSLTTDGSAYLAHVREGLTALQRFPGTA VAPGKRRLKIAVTPTFARALLIPRLRQFTETYPEIDLALQVSIPLLDVVAEDADLVVR YGPGHYADMEHVEIARDVLTPLASPGFVREHGPFERPEDLEGLPLLRSPLEPWRSWFA AVGLAWAEPNEGSQFNDVGLMCDAAAAGMGVAPVRLKLAAPWLDQGTLVRLFDTDAPS PYAHYLCWRTGTMDRWECAAFADWLRRTLG" gene complement(424601..425449) /locus_tag="Dtpsy_0419" /db_xref="GeneID:7384006" CDS complement(424601..425449) /locus_tag="Dtpsy_0419" /note="TIGRFAM: formyltetrahydrofolate deformylase; PFAM: formyl transferase domain protein; amino acid-binding ACT domain protein; KEGG: ajs:Ajs_0428 formyltetrahydrofolate deformylase" /codon_start=1 /inference="protein motif:TFAM:TIGR00655" /transl_table=11 /product="formyltetrahydrofolate deformylase" /protein_id="YP_002551903.1" /db_xref="InterPro:IPR002376" /db_xref="InterPro:IPR002912" /db_xref="InterPro:IPR004810" /db_xref="GI:222109639" /db_xref="GeneID:7384006" /translation="MTHSYILTLSCPDRLGLVHAVSGFLLDHGGNIEEAAQYNDQGTG LFFMRVQFACESTDEATLKAELATFAEEHSMRWSLHATSAAMKTVLMVSKEGHCLNDL LFRYKSGLLPIDIRAIISNHRDFYQLAASYNIPFHHIPVTAATKAQAEAKQYEIIQAE GAELVVLARYMQVLSNDLCAKLSGRAINIHHSFLPSFKGAKPYYQAHDRGVKLIGATA HYVTADLDEGPIIEQDVTRADHTDTVEDLTARGRDTESQVLARAVKWHSEHRVLLNGH KTVVFR" gene 425450..427822 /locus_tag="Dtpsy_0420" /db_xref="GeneID:7384007" CDS 425450..427822 /locus_tag="Dtpsy_0420" /note="KEGG: aav:Aave_0649 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; GGDEF domain containing protein; PAC repeat-containing protein; EAL domain protein" /codon_start=1 /inference="protein motif:TFAM:TIGR00254" /transl_table=11 /product="diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)" /protein_id="YP_002551904.1" /db_xref="InterPro:IPR000014" /db_xref="InterPro:IPR000160" /db_xref="InterPro:IPR000276" /db_xref="InterPro:IPR000700" /db_xref="InterPro:IPR001610" /db_xref="InterPro:IPR001633" /db_xref="InterPro:IPR013655" /db_xref="InterPro:IPR013656" /db_xref="InterPro:IPR013767" /db_xref="GI:222109640" /db_xref="GeneID:7384007" /translation="MLRLSQHARPLQECGLLSKGAGRRPSWRPLQGRWMLALAVGAMG AAWAWAGAAALQYLPLEPQALQTLLQYKSGLDAVLAGALLGWLLLRWRRGGSRRTLAR RVEQVLRHAPAGMARLSMDGRLVWANERLREWLGVAPHEPLPQVDFRTLVRPHDSDWA QRQLQRLRAGEIDHYQGERWCRNQRDGSQLPVLCTVSHVLALESEPDHLVCVLQSLRE VHAARDAQALSEQRWRLAATVVDNTIEGVVVTDADGRILSVNPAVTRLMGYTEEELLG QNPRVFKSGRHGPAFYEAMWDTMRQTGHWQGEIWNRRKNGEVFPERMSLSAVRGADGA VTHYVCMFTDISEEKAQHQRLEFLAHCDPLTGLPNRAWFGEQLDSAVRQAQDSGEQMA LLLLNLDRFKDVNDSYGHAVGDEVLRHITRQVEQSLRPGDLLGRLAGDEIAVLARHLR HADGAAAVARHLIAAASTPWCTPDGIQVVVGVSVGICMFPAHARTTEALLQGAHSSVY GAKARGRGAYCFFDESLIQAARERLEIEARLRVALAQGHLRLYYQPQVCIVTGRIMGA EALVRWLDPQEGMISPARFIPVAETSGVIGPLGQWVMRAACEQGQRWRADGLPEIRLA INLSPRQFQLTDVAACAAEALKASGFPARCLELELTESVLAERPDEIRAVLQRLQQLG VRMAVDDFGTGYSSLAHLKRFPIDVLKIDQGFIRDIPRSADDMAISAAIVAMGHSLGL SVLAEGVETPQQLAFLRERGCDAYQGYLCSRPLPAEEFARLLQAHNGMAG" gene complement(427850..428767) /locus_tag="Dtpsy_0421" /db_xref="GeneID:7384008" CDS complement(427850..428767) /locus_tag="Dtpsy_0421" /note="PFAM: protein of unknown function DUF399; KEGG: ajs:Ajs_0430 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF04187" /transl_table=11 /product="protein of unknown function DUF399" /protein_id="YP_002551905.1" /db_xref="InterPro:IPR007314" /db_xref="GI:222109641" /db_xref="GeneID:7384008" /translation="MIGMQVAFTPGCKATTPYHWPMIFSPLVRLLLTALALVWIAGCT TPPEQPQPTSGAETAWDSQLERWPPVDALLLGEQHDAAAHQQWQRHTVQWLAVRQRLA ALVLEMAPEGAGTDGLPPDAGAAQVRAALQWDEQAWPWDRYAPVVMAAVAAGVPVRGG NLPRSQMPQAMRDTALDTHLPPAALARQRTAIEEGHCGLVPAQRLMPMVRIQLARDAR MARAVQAAHRPGRTVLLVAGFGHVQRSLGVPTWLPSDFMSKVAIAQAGQARAAIENEA DYIHRTPALTPHDPCAELRERWPGPPPAP" gene 428981..431422 /locus_tag="Dtpsy_0422" /db_xref="GeneID:7384009" CDS 428981..431422 /locus_tag="Dtpsy_0422" /note="TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase large subunit domain protein; KEGG: ajs:Ajs_0431 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent" /codon_start=1 /inference="protein motif:TFAM:TIGR02504" /transl_table=11 /product="ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent" /protein_id="YP_002551906.1" /db_xref="InterPro:IPR000788" /db_xref="InterPro:IPR013344" /db_xref="InterPro:IPR013509" /db_xref="GI:222109642" /db_xref="GeneID:7384009" /translation="MQREITDLAPALSTQPISMDVLKEKYFKDGESDVEDLFRRVARA LASVEREDMRQALEARFLDNLRAGAIGAGRIMSAAGTDIQATLINCFVQPVGDCIQGV DDAGYPGIYEALREAAETMRRGGGVGYDFSRIRPRGALVKGTASMASGPCSYINVFDQ SCSTVESAGARRGAQMGVLRIDHPDVLDFITAKRTPGRWNNFNVSVGVPDAFMEAVEQ DRDWELVHGAAPGAELQAQGAHQRADGQWVYRTVRARELWDTIMKSAYDFAEPGILFL DQINTDNNLHYTETIQATNPCGEQPLPPYGCCDLGPIILTRFVRNPFGLHGEASFDFD AFEQAVATQVRALDNVLDVTFWPLPQQQAESAAKRRIGVGFTGMGNTLAMLCKRYDRR EGRDMAVQIAERMRNAAYRASVELAKEKGAFPKFDADGYLAKGTFASRLPADIQKAIR KHGIRNSHLLSIAPTGTVSLAFADNASNGIEPPFSWSYTRRKREADGSKSEYVVEDYA WRLYKTLGGDVNHLPAYFVSAMDMAAADHVAMMEAVQPFVDTAISKTVNVPEDYPYAD FKGLYMQAWHSGLKGLATYRPNSILGAVLEVTPAAAPAPAAAPEAVPAPVVVDPMRTM IESRPTGGLSAVAEKLEYWTQEGHKTLYLIVSFLPVPDGRGGTVDRAIEFFMPVGQSG ESQQWITSSMRLLSLAARGGFLERALSDMRKVAWDRGPVRLGTHQKADGTHVPLWHDS EVAAIAYAVQNILAQRAMPQQQVLPLDEPAAAPATGMPPAMAGKKCNECGAHAVIRKD GCDYCTQCGALGSCG" gene 431593..433509 /locus_tag="Dtpsy_0423" /db_xref="GeneID:7384010" CDS 431593..433509 /locus_tag="Dtpsy_0423" /note="PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: ajs:Ajs_0432 signal transduction histidine kinase, nitrate/nitrite-specific, NarQ" /codon_start=1 /inference="protein motif:PFAM:PF02518" /transl_table=11 /product="GAF sensor signal transduction histidine kinase" /protein_id="YP_002551907.1" /db_xref="InterPro:IPR003018" /db_xref="InterPro:IPR003594" /db_xref="InterPro:IPR003660" /db_xref="InterPro:IPR005467" /db_xref="InterPro:IPR011712" /db_xref="GI:222109643" /db_xref="GeneID:7384010" /translation="MRNKSTLSTKLLAMGTVFLLVALASIGFTLWVTWKLEGGAAAVN EAGRLRMNMLRMVLAQQNESPQEFARLETRFNEGLELLRTGDPARPLFVPWSDDTRER YEHIRRQWLLIENDWKAAAHYESTAAAVARADAFVLDLDSFVEAIEIQIVRLTAVLHL FHLFMVALAIGSAVAFMALSYLLVLNPVTRLQQALARLRKGDLGTRLEVEADDEFGQL TAGFNLMAHALQTSHEDLERKVREKTATIEVRNQRLAALYAVSALAAEAGSLEELTQG FVQQIRRVAGCDAAAVRWSDEANERYVLLASDGLPQSLVEHEHCVVTGACECGQAQGQ ARMRVIPIMPAGGLQLPHCREAGFETVVSIPVQMHQRLLGEVTLLYRSPLELSAEMRE LLSTMAHHLATSMESLRASALEREAAVAQERSLIARELHDSIAQSLAFLKIQTQLLRD AVAKGNTEARDRSMAELDTGVRECYADVRELLVHFRTRTQDEDIEAALRATLSKFEHQ TGAATALSMAGHGLPLAQDVQIQVLHILQEALSNVRKHADARRVELRVQRHPRWRFEV QDDGRGFDPDSVPPDSLHVGLGIMRERAQRIGAHLELVSRPGGGGTCVILELPPTTRE EPALPLSLVSSAAA" sig_peptide 431593..431676 /locus_tag="Dtpsy_0423" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.446 at residue 28" gene 433506..434177 /locus_tag="Dtpsy_0424" /db_xref="GeneID:7384011" CDS 433506..434177 /locus_tag="Dtpsy_0424" /note="PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; SMART: regulatory protein LuxR; response regulator receiver; KEGG: ajs:Ajs_0433 two component LuxR family transcriptional regulator" /codon_start=1 /inference="protein motif:PFAM:PF00072" /transl_table=11 /product="two component transcriptional regulator, LuxR family" /protein_id="YP_002551908.1" /db_xref="InterPro:IPR000792" /db_xref="InterPro:IPR001789" /db_xref="InterPro:IPR013249" /db_xref="GI:222109644" /db_xref="GeneID:7384011" /translation="MNAPTTLFLIDDHTLLRRGLVALLSQQPDLRVVGEAGDAAEALR LLPALRPDVILLDNHLPGVRGVDAIAGLREASQGSRVLMLTVSEDGQDLAAALRNGAQ GYLLKTIDGDLLAQAIRRAARGEPVVSPEMMGKLVAAFQSQGAPTPEPLPEEEEPASV LSPREEDVLREIARGLSNKEIARALDIAETTVKIHVQHILRKLGLSSRVQAAVYASDR HRLTE" gene 434323..435630 /locus_tag="Dtpsy_0425" /db_xref="GeneID:7384012" CDS 434323..435630 /locus_tag="Dtpsy_0425" /note="PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_0434 major facilitator superfamily transporter" /codon_start=1 /inference="protein motif:PFAM:PF07690" /transl_table=11 /product="major facilitator superfamily MFS_1" /protein_id="YP_002551909.1" /db_xref="InterPro:IPR007114" /db_xref="InterPro:IPR011701" /db_xref="GI:222109645" /db_xref="GeneID:7384012" /translation="MAQLPQRAAPSASTIGEDPRHTRKAWSVLIVSTLAFTVCFMVWM MFGVIGIPIKKMLNLSSTQFGLLTAMPVLTGSLVRVPLGIWTDRYGGRIVMALLMAAT VPAIWMMGYATEYWHFLVIGLFVGLAGGSFSVGTPYVARWFPKHRQGTAMGVYGAGNS GAAVNKFVAPVILVAFGWAAVPHVYAAIMLGTLVLFWLFSHSDPAHLVPSNVSFGEQL KALKDPKVLKYCQYYSIVFGGYVALSLWMVQYYVGEYGLDIRVAALLAACFSLPGGVL RAIGGVLSDKFGAHSVTWWVMWVSWICLFLLSYPQTDFTIQTVNGPTTLHVGLNVYMF TALMFVLGIAWAFGKASVFKYISDDYPKNIGAISGIVGLAGGMGGFILPILFGMLMDW TGIRSSAFMLMYGVVWVSLIWMYFTEVRRTDVMKSHNAAPAAH" gene 435650..437095 /locus_tag="Dtpsy_0426" /db_xref="GeneID:7384013" CDS 435650..437095 /locus_tag="Dtpsy_0426" /note="TIGRFAM: nitrite transporter; PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_0435 nitrite transporter" /codon_start=1 /inference="protein motif:TFAM:TIGR00886" /transl_table=11 /product="nitrite transporter" /protein_id="YP_002551910.1" /db_xref="InterPro:IPR004737" /db_xref="InterPro:IPR011701" /db_xref="GI:222109646" /db_xref="GeneID:7384013" /translation="MSTNTVSQGSGRKGRVLTLWTPEDKSFWAREGEAVAKINLWISV PALFLAFAIWQVWSVVAVNLPALGFKYSTNQLFWLAAAPALSGATLRIFYSFMVPIFG GRRWTALSTASLLVPAIGIGYAVQDNTTSYPTMLLLALLCGLGGGNFSSSMANISFFF PKERKGSALGVNAGLGNLGVSVVQFLSPLVITAGIFGIFGGEPQTIVKNGQEQMVWAQ NAAFIWVPWIALAAVAAWFGMNDIADARASFAAQAAIFKRKHNWIMCVLYLGTFGSFI GFAAGFPLLIKALFPEVNPLAYAWLGPLVGAVVRPFGGWLADKVGGARVTVWNFLVMA LAVVGVLFFLPKGSGGFALPFGPAEGSFTGFFLMFLVLFFTTGIGNGSTFRMIPVIFL AQKLRELRTDDEASRAQAIKDGNTEGAAAVGFAGALGAYGGFFIPKSYGSSIAATGGP EFALWMFAVFYVLCIIITWWYYSRKHAEMPC" gene 437132..440920 /locus_tag="Dtpsy_0427" /db_xref="GeneID:7384014" CDS 437132..440920 /locus_tag="Dtpsy_0427" /note="TIGRFAM: nitrate reductase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: ajs:Ajs_0436 respiratory nitrate reductase alpha subunit apoprotein" /codon_start=1 /inference="protein motif:TFAM:TIGR01580" /transl_table=11 /product="nitrate reductase, alpha subunit" /protein_id="YP_002551911.1" /db_xref="InterPro:IPR006468" /db_xref="InterPro:IPR006655" /db_xref="InterPro:IPR006656" /db_xref="InterPro:IPR006657" /db_xref="GI:222109647" /db_xref="GeneID:7384014" /translation="MSHFLDRLSYFAQPRETFSQGHGQTNGEDRTWEDAYRDRWAHDK IVRSTHGVNCTGSCSWKIYVKGGIVTWETQQTDYPRTRPDLPNHEPRGCARGASYSWY LYSANRVKYPMVRGRLLKHWRAALAIAKSPVDAWAAIVENDSARREWQKQRGLGGFVR STWDEVNQMIAAANVYTIKKHGPDRIIGFSPIPAMSMISYAAGSRYLNLIGGVPMSFY DWYCDLPPSSPQVWGEQTDVPESADWYNSNFIIAWGSNVPQTRTPDAHFFTEVRYKGA KVVAVTPDYSEVAKLADLWLHPKQGTDAAVAMAMGHVILKEFYFDKRSAYFDDYARRY TDLPLLVVLKEKTLPDGRTVMVPDRYVRASDFGDKLGQTNHPDWKTVAYGTDGKVALP NGSIGFRWGKDGRDDQGLWNLESKEARTGNDVQLKLSVLEDGAQEHQVTDVAFPYFGG IETPNFEANDQGGDVIVRRVPITHLDLQGEGVQGRVAVATVFDLQVANYGILRGLQGE EKDGGYDANAPYTPAWQESITGVPRDQVIAIARQFADNADKTHGKSMVIIGAAMNHWY HCDMNYRGIINMLMMCGCIGQSGGGWSHYVGQEKLRPQTGWTALAFALDWIRPPRQQN STSFFYAHTDQWRYEKLGVEEVLSPLADAKAYQGSMIDFNVRSERMGWLPSAPQLQTN PLQVVRDAAAKGMDAKDYVVQSLKNGSLTLSCEDPDNPMNWPRNMFVWRSNILGSSGK GHEYFLKHLLGTTNGVQGKDLGKDEAKPTEVKWHAQAPEGKLDLLVTLDFRMSTTCLY SDIVLPTATWYEKNDLNTSDMHPFIHPLSAAVDPAWQSRSDWEIYKGFAKAFSEVCVG HLGVEKEVVLTPIMHDTPAELAQPYGVKDWKRGECDLIPGVTAPQVTVVERDYPNTYK RFTALGPLMDKVGNGGKGIAWNTETEVAQLGDLNGRVREEGVTQGRPRIVSDIDATEV VMMLAPETNGHVACKAWEALGKQTGREHVHLALHREDEKIRFRDIQAQPRKIISSPTW SGLESEKVSYNAGYTNVHELIPWRTLTGRQQFYQDHPWMRDFGEGFVSYRPPVHLKAL HEVEGKMPNGNPEIALNFITPHQKWGIHSTYSDNLHMLTLNRGGPVIWLSEDDAKRGG IVDNDWVELFNANGAIAARAVVSQRVNPGMVLMYHAQEKIINTPGSEITGTRGGIHNS VTRVVLKPTHMIGGYAQYSYGFNYYGTIGTNRDEFVLVRKMRRVDWMDDEASTSAAHA " gene 440939..442462 /locus_tag="Dtpsy_0428" /db_xref="GeneID:7384015" CDS 440939..442462 /locus_tag="Dtpsy_0428" /EC_number="1.7.99.4" /note="TIGRFAM: nitrate reductase, beta subunit; KEGG: ajs:Ajs_0437 respiratory nitrate reductase beta subunit" /codon_start=1 /inference="protein motif:TFAM:TIGR01660" /transl_table=11 /product="nitrate reductase, beta subunit" /protein_id="YP_002551912.1" /db_xref="InterPro:IPR001450" /db_xref="InterPro:IPR006547" /db_xref="GI:222109648" /db_xref="GeneID:7384015" /translation="MKIRAQIGMVLNLDKCIGCHTCSVTCKNVWTSRPGVEYAWFNNV ETKPGIGYPKEWENQDKWNGGWVRNPDGSIAPRQGGKWKLLMRIFANPNLPQIDDYYE PFTFDYDHLQSAPEMKAAPTARPRSLITGQRMEKIEWGPNWEEILGGEFSKRSADVNF EQVQKDMYGQFENTFMMYLPRLCEHCLNPACVASCPSGSIYKREEDGIVLIDQDKCRG WRMCVSGCPYKKIYYNWQTGKAEKCIFCYPRIEAGQPTVCSETCVGRIRYLGVLLYDA DRIQEAASVERDRDLYEAQLDIFLDPNDPDVIRQAKADGISDAWLEAAKNSPVYKMAV DWKIALPLHPEYRTLPMVWYVPPLSPITSAANAGHLGVNGEIPDVSQLRIPVQYLANL LTAGDTGPVVRALERMLAMRAYQRGMHVDRQQNLAVLQQVGLTVHEVEDMYQVMAIAN YEDRFVIPSAHREYAENAFDLRGGCGFSFGNGCSDGSTDVSMFGGKKRRTIPIKATV" gene 442482..443180 /locus_tag="Dtpsy_0429" /db_xref="GeneID:7384016" CDS 442482..443180 /locus_tag="Dtpsy_0429" /note="TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; PFAM: Nitrate reductase delta subunit; KEGG: ajs:Ajs_0438 respiratory nitrate reductase chaperone NarJ" /codon_start=1 /inference="protein motif:TFAM:TIGR00684" /transl_table=11 /product="nitrate reductase molybdenum cofactor assembly chaperone" /protein_id="YP_002551913.1" /db_xref="InterPro:IPR003765" /db_xref="GI:222109649" /db_xref="GeneID:7384016" /translation="MFQKTPESLRLTLRALAHLLGYPDAALRANAPALLDALRLERAL PEARMQEIEALCRQLCAMEPYEAEARYVDTFDRGRQTSLHLFEHVHGDSRERGPALID LMQTYEKAGLQFDAQELPDHLAVVLEFASTQPPAVAREFLGEMAHILNALFTALTSKG NPYACVIAAVLEVAGQRVQAVAIAPEPGLDDAWAEPEAFDGCATRGQNRPDQPQPLHF VRNARTNSSQGASV" gene 443177..443911 /locus_tag="Dtpsy_0430" /db_xref="GeneID:7384017" CDS 443177..443911 /locus_tag="Dtpsy_0430" /EC_number="1.7.99.4" /note="KEGG: ajs:Ajs_0439 respiratory nitrate reductase gamma subunit; TIGRFAM: respiratory nitrate reductase, gamma subunit; PFAM: Nitrate reductase gamma subunit" /codon_start=1 /inference="protein motif:TFAM:TIGR00351" /transl_table=11 /product="respiratory nitrate reductase, gamma subunit" /protein_id="YP_002551914.1" /db_xref="InterPro:IPR003816" /db_xref="GI:222109650" /db_xref="GeneID:7384017" /translation="MTAWIDNLLFGLYPYICLAVFFIGSWARFDRDQYTWKSDSSQLL RRGSLRWGSNLFHVGVLVLFFGHFVGMLTPHALYEPFMSAGAKQIMAMVVGGVAGTLG FIGVTLLLHRRLTDARIRATSKTSDILLLWVLWVQLALGLATIPLSAQHLDGSMMMLL AEWAQRIVTFRGGAVELLANAGWVFKAHMFLGMTVFLIFPFTRLVHVWSGFGTLAYIT RPYQLVRARRMNLPAGHNQPGNRNAL" gene 444003..444839 /locus_tag="Dtpsy_0431" /db_xref="GeneID:7384018" CDS 444003..444839 /locus_tag="Dtpsy_0431" /note="PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: ajs:Ajs_0440 PpiC-type peptidyl-prolyl cis-trans isomerase" /codon_start=1 /inference="protein motif:PFAM:PF00639" /transl_table=11 /product="PpiC-type peptidyl-prolyl cis-trans isomerase" /protein_id="YP_002551915.1" /db_xref="InterPro:IPR000297" /db_xref="GI:222109651" /db_xref="GeneID:7384018" /translation="MSNTTCGSGGCGCAGSTDNLPQEDAAPVARINGVPLHAEGEILP PDALRQRACTELLRQQAQREGLLSQDDAPGLDGATSAEASQAIERLLDQALQVPEPSE EACRRYHAAHPTLGGQGERVRMRHVLFAVTPGVDVKLLRQRAEGVLLDLRCADDDGAR FAAAAGQWSNCPSGQEGGDLGWLSAEDCAPEFAREVFGTQEVGVLSRLVHSRFGLHVV EVCERQPGQELPFEQVRASVALMLRQQAWVNALRQYLQLLAGEAEVEGVHLDAADTPL VQ" gene 444861..445538 /locus_tag="Dtpsy_0432" /db_xref="GeneID:7384019" CDS 444861..445538 /locus_tag="Dtpsy_0432" /EC_number="4.2.1.1" /note="PFAM: carbonic anhydrase; KEGG: ajs:Ajs_0441 carbonate dehydratase" /codon_start=1 /inference="protein motif:PRIAM:4.2.1.1" /transl_table=11 /product="Carbonate dehydratase" /protein_id="YP_002551916.1" /db_xref="InterPro:IPR001765" /db_xref="InterPro:IPR015892" /db_xref="GI:222109652" /db_xref="GeneID:7384019" /translation="MPDDELLQRLRRFHLDAFPQYREQFQTLVDEGQHPTTLFIGCSD SRLLPYLLTGAGPGELFLVRNVGAFVPPYDGSYGHHGTAAAIEFAVLELHVSRIVVCG HSHCGAIKALYGEVSPEARNLQRWLDLGREAALPVQPGPEALRRTEQRAVVLQLERLM EYPMVRRRVEDGSIALHGWHYVIEEGEVHVFDVATGGFVAASKAKSSGTGPYAPYVEH DGQVLVD" gene 445575..446909 /locus_tag="Dtpsy_0433" /db_xref="GeneID:7384020" CDS 445575..446909 /locus_tag="Dtpsy_0433" /note="PFAM: NnrS family protein; KEGG: ajs:Ajs_0442 NnrS family protein" /codon_start=1 /inference="protein motif:PFAM:PF05940" /transl_table=11 /product="NnrS family protein" /protein_id="YP_002551917.1" /db_xref="InterPro:IPR010266" /db_xref="GI:222109653" /db_xref="GeneID:7384020" /translation="MTEVRRRTVPLRSEPAAPGRPSAEALARLDRRWRPRYLMLAPHR LGFFLAMLLLMASGLWWALVQIDRVSGALALPYGVAPSLVHAAVMTFGFMPLFFAGFL FTAGPKWLHVEPWPVSRVMPPLLLQAGGWLVWLAGGSWGLLVALAGCAAAFLGLAWMT VLFIRLVQCSTLQDRLHARAIAAACLVGCVCIAALGLSLAGGRGDLARAWVLTGLWGF VAAVFVVVAHRMIPFFTSAVLPMVQAWRPFWVLWLMLAAVVAEALAVWLPWLGWAPAL DTGGLLVRGALELSVGAVLLWLAYRWGLLQSLAQRLLAMLHIGFIWLGLAFVGHGLAH GVQGLYGSAAGELGALHALTMGCLGSLMLAMVTRVSCGHGGRALVADRLVWTLFWVLQ LATVVRLAASAPLPWSPVLLAVAALLWAGIMAVWGLRLIGWYGRLRADGRPG" gene 446933..447577 /locus_tag="Dtpsy_0434" /db_xref="GeneID:7384021" CDS 446933..447577 /locus_tag="Dtpsy_0434" /note="PFAM: nitroreductase; KEGG: ajs:Ajs_0443 nitroreductase" /codon_start=1 /inference="protein motif:PFAM:PF00881" /transl_table=11 /product="nitroreductase" /protein_id="YP_002551918.1" /db_xref="InterPro:IPR000415" /db_xref="GI:222109654" /db_xref="GeneID:7384021" /translation="MPPQALNNAAATAELAAALLQARQTILPKRLGAPGPDAAQLQAI LAAAAHAPDHGCLLPWRFVLVPDAARAALGQAFADALRERDAQATPEQQEQAREKALR APVLLLVVVDECGGDPEIAPSERLVSAGCAVQNLLLMATALGFGSALTSGKALQSQAL RGLFALGEGERALCFVSVGTVVSRKPVRARPVPAQYVGTLVPGRGVQPWPQQGE" gene 447578..448003 /locus_tag="Dtpsy_0435" /db_xref="GeneID:7384022" CDS 447578..448003 /locus_tag="Dtpsy_0435" /note="KEGG: ajs:Ajs_0444 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0444" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551919.1" /db_xref="GI:222109655" /db_xref="GeneID:7384022" /translation="MQVKTEINSFDDLLRAARSHRERQRLLFVFAGTELPDEATPEQR ERFAQGEGGVLVPLMCVDKLPEELESFDALVRESQQFEQPGQPWRLVFTAALSGTAAQ APSDDDADKVLRRMVEAVKTGAFSAYLPFNRDGQPVRLG" gene 448008..448553 /locus_tag="Dtpsy_0436" /db_xref="GeneID:7384023" CDS 448008..448553 /locus_tag="Dtpsy_0436" /note="PFAM: Hemerythrin HHE cation binding domain protein; KEGG: ajs:Ajs_0445 hemerythrin HHE cation binding domain-containing protein" /codon_start=1 /inference="protein motif:PFAM:PF01814" /transl_table=11 /product="Hemerythrin HHE cation binding domain protein" /protein_id="YP_002551920.1" /db_xref="InterPro:IPR012312" /db_xref="GI:222109656" /db_xref="GeneID:7384023" /translation="MASRVSLPGLHTPGAGFDEPFEMLGACHDRVRRSLDLLQRLRDY LKAHACDDSARQAARDVLRYFDIAAPLHHEDEELHVFPPLLAGGDAALTDLVRQLQRD HVLMAERWAAARVGLQALADGAVQAFTPQHETALDRFAQCYDDHLRHEDDRIYPAARA LLDDPAQQSMGQEMARRRGVR" gene complement(448774..449064) /locus_tag="Dtpsy_0437" /db_xref="GeneID:7384024" CDS complement(448774..449064) /locus_tag="Dtpsy_0437" /note="KEGG: ajs:Ajs_0446 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0446" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551921.1" /db_xref="GI:222109657" /db_xref="GeneID:7384024" /translation="MNMLYDSDSFVVVHMLADATPDSASEAATPAVPQLVRHGFEIVD KRSGKEVYLDGSWAEMFQQQILAWQRNTPTQEEVEDTLDGYVGLAQNPVIVH" gene complement(449240..450454) /locus_tag="Dtpsy_0438" /db_xref="GeneID:7384025" CDS complement(449240..450454) /locus_tag="Dtpsy_0438" /note="KEGG: ajs:Ajs_0447 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0447" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551922.1" /db_xref="GI:222109658" /db_xref="GeneID:7384025" /translation="MPRRALLLLTAVVLALHWLVLVGLPRGGTDQGAPQRLAFHTRMV EPPPPPPPPPESQAAPVPPPAPKPRPRPVRKPPPPPVEAPLPTQHPEPAPAMEAPAQT APSPAEPPAEVPADSSAPTPEVPADAAAPSAPLSPASDPAMPAMAEASSASAPAAASQ PAQEAPALTAGVEILPPGAAGAVAGTEPPPVRLPPSARLAFDVTGEVKKFHYNASAEL LWRQDGTQYEARQQIKAFLLGARSQSSVGQITPQGLRPTRFGDKSRSERAAHFDFERG EVIFSANAPRAAIGSGAQDRLSVFIQLGALLAAAPERYPPGTRITLTTVGARSAERWT FTVEGPQTLELPAGSTPALKLQRLPRPDQRYDQKAELWLGTDMGYLPVRIRLTQANGD FADLSLSHHDTP" sig_peptide complement(450383..450454) /locus_tag="Dtpsy_0438" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.918) with cleavage site probability 0.452 at residue 24" gene complement(450459..451247) /locus_tag="Dtpsy_0439" /db_xref="GeneID:7384026" CDS complement(450459..451247) /locus_tag="Dtpsy_0439" /note="PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: ajs:Ajs_0448 IclR family transcriptional regulator" /codon_start=1 /inference="protein motif:PFAM:PF09339" /transl_table=11 /product="transcriptional regulator, IclR family" /protein_id="YP_002551923.1" /db_xref="InterPro:IPR005471" /db_xref="InterPro:IPR014757" /db_xref="GI:222109659" /db_xref="GeneID:7384026" /translation="MDKERVGIQSVEVGFALLDALSRARGPLMLKDLAQEAGMSAAKA HRYLVSFQRLGLVVQDARNARYDLGPAALKLGLASLARLDAMRLARERMAPLMDALGH TLALAVWGNHGPTIVHWEEAPRALTANLRLGDVMPLLSSATGRCFAAYLPREKTAALL AEELALATRQGRADLPHDEAGVQALLREVRERRCARVLDTLLPGIHAFCAPVFDAGGH LALAITTLGPAATFDAAWGGAIEAPLRAAAEQLSRDLGHAATPG" gene 451363..452346 /locus_tag="Dtpsy_0440" /db_xref="GeneID:7384027" CDS 451363..452346 /locus_tag="Dtpsy_0440" /note="PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: ajs:Ajs_0449 fumarylacetoacetate (FAA) hydrolase" /codon_start=1 /inference="protein motif:PFAM:PF01557" /transl_table=11 /product="fumarylacetoacetate (FAA) hydrolase" /protein_id="YP_002551924.1" /db_xref="InterPro:IPR002529" /db_xref="GI:222109660" /db_xref="GeneID:7384027" /translation="MKLATYKDGSRDGQLVVVSRDLGTAHYATGIASRLQQVLDDWNF MAPQLQDLYDQLNAGRARHPFPFDPQQCMAPLPRAYQWADGSAYINHVELVRKARNAE VPASFYTDPLMYQGGSDDFIGPCDDVVVPSEAMGIDFEAEIAVVTGDVKMGASPEQAL DGIRLVMLANDVSLRNLIPAELAKGFGFFQSKPATAFSPVAVTLDELGDAWQGGRVHL TLQSTWNGRKVGMCDAGPEMTFHFGQLIAHIAKTRNVRAGSIVGSGTVSNKDWAKGYN CIAEKRCIETIQDGQPSTEFMRYGDTIRIEMKNKAGQSLFGAIDQTIAAPQ" gene 452423..453391 /locus_tag="Dtpsy_0441" /db_xref="GeneID:7384028" CDS 452423..453391 /locus_tag="Dtpsy_0441" /note="PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0450 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF03401" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551925.1" /db_xref="InterPro:IPR005064" /db_xref="GI:222109661" /db_xref="GeneID:7384028" /translation="MERRTFLAACAATAAAPWARADTGYPSQPIRWVVPYPAGGGTDV LARTVAEAMRGGLGQQIVVDNRPGASTNIGSQIVATAKPDGYTVMSADNALLAYNEHL YRRLPFHPDKDFTYIGGLSRFPLVLVVNPAFAAQTFQDFLAYVKAHPGQVNYASPGNG SPHHLAMELFKHRTQTFLTHIPYRGAAPAVQDVMGGQVPCMFLDLAAGLPVIQSGKVR ALAIGAARRAAALPHVPTLAEVGVADAEVYAFQGLLGPAGLPPAITARLNAALNQALA APEVVERMRAFGMEPLAGTPEQFHALARAEARRWGPVIAATGVKLD" sig_peptide 452423..452488 /locus_tag="Dtpsy_0441" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.827 at residue 22" gene complement(453456..455522) /locus_tag="Dtpsy_0442" /db_xref="GeneID:7384029" CDS complement(453456..455522) /locus_tag="Dtpsy_0442" /note="PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: ajs:Ajs_0451 molybdopterin oxidoreductase" /codon_start=1 /inference="protein motif:PFAM:PF00384" /transl_table=11 /product="molybdopterin oxidoreductase" /protein_id="YP_002551926.1" /db_xref="InterPro:IPR006655" /db_xref="InterPro:IPR006656" /db_xref="InterPro:IPR006657" /db_xref="InterPro:IPR006963" /db_xref="GI:222109662" /db_xref="GeneID:7384029" /translation="MLPTPVPDASATHQVRGACPHDCPDTCALLTTVENGRAVRVQGN PAHAQTGGVLCAKVSKYAERTHHAERILTPLKRTGPKGSGQFTPVSWDEALGDIAARL AHIAARDPQAIQPYSYAGTMGLVQGESMDRRFFHRLGASLLARTICATAGGEGLVHTL GAKVGMKVEFFAEAQLILIWGSNSIGSNLHFWRIAQQAKRDGARLVCIDPRKSETAEK CHEHLQLRPGTDAALALALMHELIVHDWLDHDYLARHTLGWEPLRERALQWPPERAAE VCGLPVEQIRRLAHDYGTTRPAAIRLNYGVQRTHGGANAVRAIASLPALTGAWRHRAG GVLLSSSGSFPVDRAALQRPDLLAGRSPRTINMVTIGDDLLRDASPSFGPKIEALVVY NSNPVAVAPDSRQVVRGFAREDLFTVVLEHFQTDTADYADYILPATTQLEHWDVHLAY GHTDVLLNRPAIAPQGQARSNAQIFRDLAARMGFTEPCFADSDEALCRQAYGDRVDFD LLLEQGFAPLSVPDAPFADGGFPTPSGQCEFYSQRLADQGLDPLPGYVPNHEGAGTSA DYPLAMISPPARNFLNSTFVNLQSLRDIEGRPLLEIHPEDAAARGIADGALVRVFNDR GSYACHAALNGRARPGVVNGLGVWWRKLGHNGTNVNELTSQALTDLGAGPTFYDCRVQ VEPLAS" gene 455644..456792 /locus_tag="Dtpsy_0443" /db_xref="GeneID:7384030" CDS 455644..456792 /locus_tag="Dtpsy_0443" /note="PFAM: Extracellular ligand-binding receptor; KEGG: ajs:Ajs_0452 extracellular ligand-binding receptor" /codon_start=1 /inference="protein motif:PFAM:PF01094" /transl_table=11 /product="Extracellular ligand-binding receptor" /protein_id="YP_002551927.1" /db_xref="InterPro:IPR000709" /db_xref="InterPro:IPR001828" /db_xref="GI:222109663" /db_xref="GeneID:7384030" /translation="MHSTRLSRRQFSAGMGAALLTGASLTRAQSDTRIVLGQSAALTG PASQLGLQFQAGAKLAFDQVNAQGGIGRRTIELRSLDDGYEPDRCAENTRRLINEDVL ALFGYVGTPTSLAAQPLFTQTKVPFFAPVTGAESLRQPFNRLAFHVRASYADEAELIV RQLTNLGLDRIGVFYQDDAYGKAGLDAVTRALATRKLAPVATGTVARNSTNVTAAVAP LVAAQPVAIVQIGAYAASAAFVLAARKAGYGGKFYNVSFVGTQALADALGANGAGVVV SQVVPSPYQQSRQITREFQEAIKKGGNVQANYSSMEGYLAARVFIEGLRNAQAHASGK LTRESLVAGLESLRGSVGGFTVNFSPSDHEGSRFVEMSMLTGDGRVRT" sig_peptide 455644..455730 /locus_tag="Dtpsy_0443" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.942 at residue 29" gene 456908..458113 /locus_tag="Dtpsy_0444" /db_xref="GeneID:7384031" CDS 456908..458113 /locus_tag="Dtpsy_0444" /EC_number="3.5.1.32" /note="KEGG: ajs:Ajs_0453 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein" /codon_start=1 /inference="protein motif:TFAM:TIGR01891" /transl_table=11 /product="amidohydrolase" /protein_id="YP_002551928.1" /db_xref="InterPro:IPR002933" /db_xref="InterPro:IPR010168" /db_xref="InterPro:IPR011650" /db_xref="GI:222109664" /db_xref="GeneID:7384031" /translation="MNIIDSIAREAAAIAEVRRDIHAHPELCFQEVRTADVIAAKLTE WGIPIHRGLGTTGVVGIVHGRDGGACGRAVGLRADIDALPMQEFNTFAHASKHQGRMH ACGHDGHTAMLLAAAQYFSKHRDFDGTVYLIFQPAEEGGGGAREMIKDGLFERFPMQA VFGMHNWPGMPAGSFAVSPGPVMASSNEFKITIRGKGSHGAMPHMGIDPVPVACQMVQ AFQNIISRNKKPIEAGVISVTMIHAGEATNVVPDSCELQGTVRTFSTELLDMIERRMR QVAEHTCAAFEARCEFEFVRNYPPTINSPAEAEFARQVMVGIVGEDKVLAQEPTGGAE DFSFMLQAKPGAYVFIANGDGDHRAMGHGGGPCTLHNPSYDFNDALIPLGGTYWVELA RQWLAQPTA" gene 458214..459314 /locus_tag="Dtpsy_0445" /db_xref="GeneID:7384032" CDS 458214..459314 /locus_tag="Dtpsy_0445" /note="KEGG: ajs:Ajs_0454 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0454" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551929.1" /db_xref="GI:222109665" /db_xref="GeneID:7384032" /translation="MIGIPQAFAARYAQARAQFVGAAAVAGLALQPQVHPLCGPNGET LALDVVREGPLDAPRLLIVSSGCHGVEGLCGSGVQVFALQDGEWRAKARAQRVAVLYL HALNPYGFAHLRRVTHENVDLNRNFVDFSQPLPANPAYSALHPVLLPPEWPPSEANTQ ALLGLLNTHGLQALQAAITRGQYQHPDGLYFGGTAPTWSNRTLRSVLRREGARAERIA WVDLHTGLGPSGHGERIHAGRDEAQALARARRWWDGGGATPVTSTEDGSSTSAPLTGL MCNSAYDECPQAEVTALTLEFGTQPASAVLQALRADHWLHRHPEASPALAARVHAQMR EAFYTDTDAWKGQVISQARQVLFQAVDGLCMA" gene 459399..459656 /locus_tag="Dtpsy_0446" /db_xref="GeneID:7384033" CDS 459399..459656 /locus_tag="Dtpsy_0446" /note="PFAM: acyl-coA-binding protein ACBP; KEGG: ajs:Ajs_0455 acyl-CoA-binding protein" /codon_start=1 /inference="protein motif:PFAM:PF00887" /transl_table=11 /product="acyl-coA-binding protein ACBP" /protein_id="YP_002551930.1" /db_xref="InterPro:IPR000582" /db_xref="GI:222109666" /db_xref="GeneID:7384033" /translation="MSDLNATFEAAVANSKNLSERPDNPTLLKIYALYKQATAGDNAE KKPSFSDIVGRAKWDAWEKLKGTSGDAAKQQYIDLIESLRG" gene complement(459735..460880) /locus_tag="Dtpsy_0447" /db_xref="GeneID:7384034" CDS complement(459735..460880) /locus_tag="Dtpsy_0447" /note="KEGG: ajs:Ajs_0456 putative zinc protease protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0456" /transl_table=11 /product="putative zinc protease protein" /protein_id="YP_002551931.1" /db_xref="GI:222109667" /db_xref="GeneID:7384034" /translation="MSTSTPSPRRPWPLLAAALLLGGCAQSGGTLGYYWQSLRGHLEI MNAARPVQEWITHPDTSAPLRERLQLAQRARAFAVDELALPDNASYRRYARLDRTAAV WNVVAAGPYSLTLHRWCFPITGCIGYRGYFDEPGARAEAARLAATGLEVSVYGVPAYS TLGYSNWMGGDPLLSTFIGWPEGDFVRLLLHELAHQVAYAEGDTAFNESYATAVERLG VQRWLQQHATPATRAQFAASEERRAQWRALTQATRRRLAEIYASNGAVTPDHQALSAM KKEAMQDFRAAYATLRARWLAAHVPEAQLAALDRWVRDANNASFAAQAAYDEGVPAFM ALFEREGRDWPRFHAAVRALAQAPQAERTAALQALAPQPPRVAHGGG" sig_peptide complement(460797..460880) /locus_tag="Dtpsy_0447" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.998) with cleavage site probability 0.859 at residue 28" gene 460928..461626 /locus_tag="Dtpsy_0448" /db_xref="GeneID:7384035" CDS 460928..461626 /locus_tag="Dtpsy_0448" /EC_number="3.2.2.20" /note="PFAM: methyladenine glycosylase; KEGG: ajs:Ajs_0457 DNA-3-methyladenine glycosylase I" /codon_start=1 /inference="protein motif:PRIAM:3.2.2.20" /transl_table=11 /product="DNA-3-methyladenine glycosylase I" /protein_id="YP_002551932.1" /db_xref="InterPro:IPR005019" /db_xref="GI:222109668" /db_xref="GeneID:7384035" /translation="MRPNPHNAPMLETTEPSSPDEASGLFTDEGGHARCFWCGASPLY QHYHDHEWGFPVTDERRLFEKLCLEGFQAGLSWITILNKREAFRAALAQFEAEPLADF GAAEVDQLMGNAGIVRHRGKIESAINNARRVLELRREFGSLAHYVWRYAPLAAQQRPE RMTLPAVRAMTTSAASVALSKDLKKRGFSFVGPTTMYAFMQAMGLVNDHLEGCGARAA AEAARAAFTPPAAG" gene complement(461696..462313) /locus_tag="Dtpsy_0449" /db_xref="GeneID:7384036" CDS complement(461696..462313) /locus_tag="Dtpsy_0449" /note="KEGG: ajs:Ajs_0458 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0458" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551933.1" /db_xref="GI:222109669" /db_xref="GeneID:7384036" /translation="MGGAARSPCRTIAAFPLPEGPMPQTPAPLSPEDAAALYQALRAE GMADALTTLHIGGAHTRLLSGAADAPALLRTLDIGARVTAATCFAHQPPTEADLEHAI MLVEDAVMPVRALLAPGSTLYTADGGIRQIALAAGLPAQPELHLSLEAVEDTFNRLAA LSLGRPATQDTLAQDNAFAATLLILRECLHHLGFDHIVVRSDAVV" gene complement(462365..462535) /locus_tag="Dtpsy_0450" /db_xref="GeneID:7384037" CDS complement(462365..462535) /locus_tag="Dtpsy_0450" /note="KEGG: ajs:Ajs_0459 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0459" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551934.1" /db_xref="GI:222109670" /db_xref="GeneID:7384037" /translation="MGNKIVTEADRKRTPRPTPMPGMAVTTHGRGQRVSLERGVATRS KKNPGKRSNKGG" gene 462825..464108 /locus_tag="Dtpsy_0451" /db_xref="GeneID:7384038" CDS 462825..464108 /locus_tag="Dtpsy_0451" /EC_number="2.1.1.79" /note="PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: ajs:Ajs_0460 cyclopropane-fatty-acyl-phospholipid synthase" /codon_start=1 /inference="protein motif:PRIAM:2.1.1.79" /transl_table=11 /product="Cyclopropane-fatty-acyl-phospholipid synthase" /protein_id="YP_002551935.1" /db_xref="InterPro:IPR003333" /db_xref="InterPro:IPR013216" /db_xref="InterPro:IPR013217" /db_xref="GI:222109671" /db_xref="GeneID:7384038" /translation="MKLLLHSLEASLALSPVGVAVELPDGARLGDANADLRLRFRDRM AVVALAMGEIGNVGAAIVEGRVALEGSMRQLMTAAAALLKLNPTHEGAATGWQRVLLR ARSMAAHTLSHDARNIQFHYDLSDDFYALWLDPRRVYSCAYYRTPDMSLAQAQEAKLD HICRKLLLRPGDRFLDIGAGWGGLLLWAAQEYGVDATGITLSRNQHAHVQRLIEERGL QGRVRMQLLDYRELQVEQPFDKIASVGMFEHVGRSQMERYFATVHRLLRPGGLLLNHG ITSGGLDNPRLGAGLGDFIERYIFPGGELLHVSTVLHDMARAGLEMVDTENLRPHYAR TLWAWSDALEARQDEARSVLVAQHGKERGEKALRAYRLYLAGCALAFERGWTALHQML AVRPTGHAEDGVLKGAQSDYPFSRAYMYEGPAAIH" gene 464129..464452 /locus_tag="Dtpsy_0452" /db_xref="GeneID:7384039" CDS 464129..464452 /locus_tag="Dtpsy_0452" /note="PFAM: Domain of unknown function DUF1840; KEGG: ajs:Ajs_0461 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF08895" /transl_table=11 /product="Domain of unknown function DUF1840" /protein_id="YP_002551936.1" /db_xref="InterPro:IPR014991" /db_xref="GI:222109672" /db_xref="GeneID:7384039" /translation="MLFKFKSRATADVIMLEPNGKQLLEIIGKSPNEPHGIITAAQIP AAIRALEEAVAVEEAAAAATAPDEDDQTEEEAPRGDGVRLRQRAAPFIDMLRRSAAED CDVVW" gene complement(464490..465527) /locus_tag="Dtpsy_0453" /db_xref="GeneID:7384040" CDS complement(464490..465527) /locus_tag="Dtpsy_0453" /note="PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0462 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF03401" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551937.1" /db_xref="InterPro:IPR005064" /db_xref="GI:222109673" /db_xref="GeneID:7384040" /translation="MPHTSTPRRTPPRRQALHAIGALLALGLGATGAAYAQASPWPAK PVRIVVPFAAGGTTDILARAIAPELGKAFGQQFIVDNRGGAGGNIGAELVARSAPDGY TLLMGTVGTHGINRALYKQLPYDPIKDFAPVTLVASVPNVMVMNTEKARSLGINTVQD FIRYAQANPGKLNMASSGNGTSIHLAGELFKSMTGTYMLHMPYRGSAPALLDMVGGNM DVMFDNLPSSMAHIKGGKLKALAVTSAKRSTALPDVPTVEEAGGPALKGFEASSWFGL LAPAGTPADIVQRVQQEVAKALATPAVKERLLSQGAIPGGNTSAEFASLIDREHRKWA QVVKASGAKVD" sig_peptide complement(465417..465527) /locus_tag="Dtpsy_0453" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.798 at residue 37" gene complement(465693..466682) /locus_tag="Dtpsy_0454" /db_xref="GeneID:7384041" CDS complement(465693..466682) /locus_tag="Dtpsy_0454" /note="PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0463 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF03401" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551938.1" /db_xref="InterPro:IPR005064" /db_xref="GI:222109674" /db_xref="GeneID:7384041" /translation="MRTTFKIAVGAAAILAAFGASAQAYPVKDKNITIVVPFSAGGPT DRVARDLAEALRKPLGGATVVVENAAGAGSTIGAAKVARAQPDGYTLLLNHIGMATIP TLYRKLSFNVLNDFEFLGIVNDVPMTIISRPTLDAKNYKELATWIAQNKEKVNLGHSG LGSAGHLCGLMFQHALQSHMTPVAYKGAAPAITDLIGGQIDLMCDQTTNTTTQIEGKK VKAFAVTTNQRLTMPSLKDLPTLQESGLKDFNVSVWHGLYAPKGTPAAVLTRINEALQ VAVKDPDFIKKQEGLGAVVVADKRVLPAEHKKFVQSEIEKWGMVIKAAGTYAD" sig_peptide complement(466608..466682) /locus_tag="Dtpsy_0454" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.603 at residue 25" gene complement(466874..468121) /locus_tag="Dtpsy_0455" /db_xref="GeneID:7384042" CDS complement(466874..468121) /locus_tag="Dtpsy_0455" /note="KEGG: ajs:Ajs_0464 putative phenylacetate-CoA ligase" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0464" /transl_table=11 /product="putative phenylacetate-CoA ligase" /protein_id="YP_002551939.1" /db_xref="GI:222109675" /db_xref="GeneID:7384042" /translation="MSMFYDALETRAPAEREAALMAALPRQIAHAQQASPAFAGILAG VDATTITDRAALARLPVTRKYELLERQQAQRGQNAFGGFSALGFGRHMPRVFASPGTI YEPEGARPDYWRMARAMYAAGFRPGELIHNSFSYHFVPAGSMMETGAHALGCTVFPGG TGQTEQQVQAMAELRPAGYIGTPSFLKIILDKAHEHGVALPSVTKALVSGEAFPPSLR DWLAARGVTGYQCYATADLGLIAYETSAREGLVLDEGVIVEIVRPGTGDPVPEGEVGE LVITTLNPDYPLIRFGTGDLSAVLPGQCPTGRTNTRIKGWMGRADQTTKVRGMFVHPG QIASVVKRFPQVQRARLVVSGEMANDQMVLQVETTETAAGMAQQLAEALREVTKLRGD VQMVPPGSLPNDGKVIEDARSYR" gene complement(468214..469023) /locus_tag="Dtpsy_0456" /db_xref="GeneID:7384043" CDS complement(468214..469023) /locus_tag="Dtpsy_0456" /note="PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_0465 ABC transporter related" /codon_start=1 /inference="protein motif:PFAM:PF00005" /transl_table=11 /product="ABC transporter related" /protein_id="YP_002551940.1" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR003593" /db_xref="GI:222109676" /db_xref="GeneID:7384043" /translation="MESRNIVLSVNGIEVIYNHVILVLKGVSLQLPEKGIVALLGGNG AGKTTTLRAISNLLKGERGEVTKGSIELRGEQIQNLSPADLVKRGVVQVMEGRHCFAH LTIEENLLTGSYTRTDKGEIAANLEKVYNYFPRLKTRRTSQAAYTSGGEQQMCAIGRA IMSNPNIVLLDEPSMGLAPQIVEEVFNIVKDLNAKEGTTFLLAEQNTNMALKYADYGY IMESGRIVMDGAAQDLASNEDVKEFYLGVGGGERKSFKDVKSYKRRKRWLA" gene complement(469220..470545) /locus_tag="Dtpsy_0457" /db_xref="GeneID:7384044" CDS complement(469220..470545) /locus_tag="Dtpsy_0457" /note="KEGG: ajs:Ajs_0466 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0466" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551941.1" /db_xref="GI:222109677" /db_xref="GeneID:7384044" /translation="MKFTRLAAAATVACTLAGFAGGAAAQAKEQFFPLLSYRTGPYAP NGVPWANGKQDYIKMINARDGGVNGVKLTWEECETGYATDRGVECYERLKSRPGVTLF DPQATGITFALTEKAPVDKIPLMTLGYGLSVAQDGMAFKWNFPYMGSYWTGADILIQH IGKNAGGLDKLKGKKIALVYHDSPFGKEPIPLLQERSKMHGFELQMLPVTAPGVEQKA TWLQVRQSRPDYVLLWGWGVMNSTALKEAQATGYPRDKMYGVWWAGAEPDVRDVGDGA KGYHALALNGHGTQSKVMQDILKHVHGANQGTGPKDEVGSVLYTRGVIIQMLGVEAVR RAQERFGKGKVMTGEQVRWGMENLALDQKKLDALGFTDLMRPLSTSCADHMGSTWARV HTWDGKQWKFSSDWYQADEQVIKPMVKAGADKYLADKKMSRREAGDCQS" sig_peptide complement(470462..470545) /locus_tag="Dtpsy_0457" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.573 at residue 28" gene complement(470622..471698) /locus_tag="Dtpsy_0458" /db_xref="GeneID:7384045" CDS complement(470622..471698) /locus_tag="Dtpsy_0458" /note="PFAM: inner-membrane translocator; KEGG: ajs:Ajs_0467 inner-membrane translocator" /codon_start=1 /inference="protein motif:PFAM:PF02653" /transl_table=11 /product="inner-membrane translocator" /protein_id="YP_002551942.1" /db_xref="InterPro:IPR001851" /db_xref="GI:222109678" /db_xref="GeneID:7384045" /translation="MFYRENGQFKTTYKADQQIFPITQDRIAILLLLAVAFVAVPAMA SDYFYRAILIPLVIMSMAALGVNILVGYCGQISLGSGAFMAVGAYGAFNFFVRFPGMP LVPALILGGLCATFFGILFGLPSLRVKGLYLAVATLAAQFFSDWMFLRIKWFTNNSDS GSVSVSNLQVFGMPLDSAMAKYLFCLTLLVVVALLAKNLVRGAIGREWMAIRDMDVAA AVIGIRPMYAKLSAFAVSSFIVGMAGALWAFVHLGSWEPAAFSVEVSFRLLFMVIIGG MGSIMGAFFGAAFIVVLPIFLNQFLPAVAGLFGVDISTAAVSHAELMIFGALIVWFLI VEPHGLAKLWSIGKQKMRVWPFPH" sig_peptide complement(471564..471698) /locus_tag="Dtpsy_0458" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.991) with cleavage site probability 0.991 at residue 45" gene complement(471817..472746) /locus_tag="Dtpsy_0459" /db_xref="GeneID:7384046" CDS complement(471817..472746) /locus_tag="Dtpsy_0459" /note="PFAM: inner-membrane translocator; KEGG: ajs:Ajs_0468 inner-membrane translocator" /codon_start=1 /inference="protein motif:PFAM:PF02653" /transl_table=11 /product="inner-membrane translocator" /protein_id="YP_002551943.1" /db_xref="InterPro:IPR001851" /db_xref="GI:222109679" /db_xref="GeneID:7384046" /translation="MAFFLETLIGGLMAGMLYALVALGFVLIFKASGVFNFAQGAMVL FAALAMARFAEWIPEWTGISNPIVANLAAFLIAGLCMFAVAWFIERLVLRHLVNQEGA TLLMATLGITYFLEGLGQTFFGSDIYKIDIGMPKDPVFLLDTVFEGGVLVNKEDVIAA GIAAALVVVLSIFFQKTKTGRALRAVADDHQAAQSIGIPLNHIWVIVWCVAGVVALVA GMIWGSKLGVQFSLTTVALRALPVVILGGLTSVPGAIIGGLIIGVGEKLSEVYLGPFV GGGIEIWFAYVLALVFLLFRPQGLFGEKIIDRV" sig_peptide complement(472672..472746) /locus_tag="Dtpsy_0459" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.724) with cleavage site probability 0.577 at residue 25" gene complement(472757..473542) /locus_tag="Dtpsy_0460" /db_xref="GeneID:7384047" CDS complement(472757..473542) /locus_tag="Dtpsy_0460" /note="PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_0469 ABC transporter related" /codon_start=1 /inference="protein motif:PFAM:PF00005" /transl_table=11 /product="ABC transporter related" /protein_id="YP_002551944.1" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR003593" /db_xref="GI:222109680" /db_xref="GeneID:7384047" /translation="MTSKKIGDVILDVKNISLRFGGVKALTDISFNVREHEIRSIIGP NGAGKSSMLNCINGVYTPSEGSITFRGQTFGHMNSRQVAEMGIARTFQNLALFKGMSV IDNIMTGRNLKIKSNLLLQALRIGPAEREEIAHRETVEHIIDFLEIQAHRKTPVGQLP YGLQKRVDLGRALAMEPQVLLLDEPMAGMNVEEKQDMCRFILDVNDEFGTTIVLIEHD MGVVMDISDRVVVLDYGKKIGDGAPDEVRNNEDVIRAYLGTSH" gene complement(473565..475499) /locus_tag="Dtpsy_0461" /db_xref="GeneID:7384048" CDS complement(473565..475499) /locus_tag="Dtpsy_0461" /note="PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_0470 AMP-dependent synthetase and ligase" /codon_start=1 /inference="protein motif:PFAM:PF00501" /transl_table=11 /product="AMP-dependent synthetase and ligase" /protein_id="YP_002551945.1" /db_xref="InterPro:IPR000873" /db_xref="GI:222109681" /db_xref="GeneID:7384048" /translation="MKTTFPHLLLQHAAQRPDAAALREKEYGIWQTWSWKDAAAEVRH MACGLLSLGFAKGQNLALISDNRPHLYMGFVAVQSVGGVPIPLYQDAVAAEMTFVIQD AEIAFAFAENQEQVDKLLEVRESVSGIQHIIYDDPRGLRHYDQPGLISTAQLVARGAE WDKAHPGAWDALVEQIDPQDVSVILYTSGTTGKPKGVCQTHASFIASAQGAVEVDRLG PQDNVISYLPPAWVGDHLFSLAQWMVAGFTINCPESASTVSIDLREIGPTYYFAPPRV FEGMLTSVSIRMEDAAAPKRWLFEKCMQLARRVGSDLLDGKPVGAIDRLKYRLADLAI YGPLRNVMGLSRIRVAYTAGAAIGPDLFRFFRSIGINLKQLYGQTETCAYVCLQRDGQ VDLNTVGQAAPGIELKIADNGEVLVKGVSVLKEYYKRPDATAEVIDAEGYFHTGDAGV IDANGQLRIIDRAKDVGKTASGAMFAPNYIENKLKFFPHIKEAVCFGNQRDQVCAFIN IDYEAVGNWAERQGIPYGGYVDLASKPRVIELIADCISQVNADLAAEAGMADTQVARF LVLHKELDPDDDELTRTRKVRRNFIAEKYGVLVDALYTGKAEQFIETQVKFEDGRKGS VSATLKITDAKTFPATRAAA" gene 475712..477445 /locus_tag="Dtpsy_0462" /db_xref="GeneID:7384049" CDS 475712..477445 /locus_tag="Dtpsy_0462" /note="PFAM: Peptidoglycan-binding domain 1 protein; SMART: AAA ATPase; KEGG: ajs:Ajs_0471 peptidoglycan binding domain-containing protein" /codon_start=1 /inference="protein motif:PFAM:PF01471" /transl_table=11 /product="Peptidoglycan-binding domain 1 protein" /protein_id="YP_002551946.1" /db_xref="InterPro:IPR002477" /db_xref="InterPro:IPR003593" /db_xref="GI:222109682" /db_xref="GeneID:7384049" /translation="MLAAMYAPFFGLEHPPFSIAPDPRYLFMSERHREALAHLLYGLD AGGGFVLLTGEIGTGKTTVCRCFLEQIPPQCNVAYIFNPKLTVPELLRSICDEFGVAH RPAIPGAETVKDCLDPLNDFLLQQHAAGRNNVLIIDEAQNLAPDVLEQLRLLTNLETS ERKLLQIILIGQPELRAMVAAPELEQLAQRVIARYHLDALSADETRQYIAHRMAVAGL QGPLPFQQRALARVHALTGGVPRRINLLCDRALLGAYGAGVREVTDAMVRRAAREVFD APATARPRPGSAGRWLAAGTGGLVGAAALGGLAWALGWWPLADGGAGSTQAQTQTQRP AIAASAAAVPASSPASAASAPDAPAPPAPPPTLAQFLAIQPVAQAPAAWQALARQWQA SVSDGAADPCAALASEGLRCYRSRRASLNLLRQLDRPVLLMLRPAEGDAQGEALAPEV AVLLRRLDDGTATLEGVQGQTLQVRVTELAPLWRGEVATLWKAPAELADSGDVTATAA GAAWLDQQLAAAGAGAAAARTATPAARRARIHQFQLGQGLTPDGRAGPLTLMLLNRAA GVPEPRLLSGA" gene 477450..478260 /locus_tag="Dtpsy_0463" /pseudo /db_xref="GeneID:7384050" gene 478407..479225 /locus_tag="Dtpsy_0464" /db_xref="GeneID:7384051" CDS 478407..479225 /locus_tag="Dtpsy_0464" /note="PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; regulatory protein Crp; KEGG: ajs:Ajs_0473 Crp/FNR family transcriptional regulator" /codon_start=1 /inference="protein motif:PFAM:PF00027" /transl_table=11 /product="transcriptional regulator, Crp/Fnr family" /protein_id="YP_002551947.1" /db_xref="InterPro:IPR000595" /db_xref="InterPro:IPR001808" /db_xref="InterPro:IPR012318" /db_xref="GI:222109683" /db_xref="GeneID:7384051" /translation="MLARMSQDASLHQRRRPPTAQELSGIPWMALLQPAERERAVAAL AVGDAQPGDYVCRVGRPVTYWFGVVEGLLKMSADNADGLTMTFTGVPPGGWFGEGTAV KREPYRYNIQALRKSVVAGLPIDTFHWLLDHSIGFNRFVMNQLNERLAQFIAAREIDR LTNPDLRVARSLAALFNPVLYPGVGEVLRITQQELAYLVGLSRQRVNEALATLEAQGA IRVEYGGLRVLDLQALRTSLFRRMEPADADRPGPRRRASPRRAPADENEPAAMI" gene 479561..480307 /locus_tag="Dtpsy_0465" /db_xref="GeneID:7384052" CDS 479561..480307 /locus_tag="Dtpsy_0465" /note="PFAM: RNA-binding S4 domain protein; pseudouridine synthase; SMART: RNA-binding S4 domain protein; KEGG: ajs:Ajs_0474 RNA-binding S4 domain-containing protein" /codon_start=1 /inference="protein motif:PFAM:PF01479" /transl_table=11 /product="RNA-binding S4 domain protein" /protein_id="YP_002551948.1" /db_xref="InterPro:IPR002942" /db_xref="InterPro:IPR006145" /db_xref="GI:222109684" /db_xref="GeneID:7384052" /translation="MRLNKRMADLRLCSRREADDWIAQGWVRVNGQVAAMGLQVGPHD RIDVDRAAQGHQRQQVTILLHKPMGYVSGQAEDGHTPAVALINPRTHWKDDESRTRFA PAQLKGLAPCGRLDIDSVGLLVLTQDGRVARQLIGEDSTVDKEYLVRVQYGDRAQDVR AVFPADKLALLNHGLALDGQQLKPALVEWQNPEQLRFVLREGKKRQIRRMCELVGLKV VGLKRIRIGQVLLGKLPPGQWRYLAPGERF" gene 480654..482606 /locus_tag="Dtpsy_0466" /db_xref="GeneID:7384053" CDS 480654..482606 /locus_tag="Dtpsy_0466" /note="PFAM: heat shock protein Hsp90; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: ajs:Ajs_0475 heat shock protein 90" /codon_start=1 /inference="protein motif:PFAM:PF00183" /transl_table=11 /product="heat shock protein Hsp90" /protein_id="YP_002551949.1" /db_xref="InterPro:IPR001404" /db_xref="InterPro:IPR003594" /db_xref="GI:222109685" /db_xref="GeneID:7384053" /translation="MSKHTHSFQAEVAQLLHLVTHSLYSNKEIFLRELVSNASDACDK LRFEALNNAALYEDAPNLEVRVSFDKEARTLTITDNGIGMSEQEAIDHLGTIAKSGTR DFMNRLSGDQKADAQLIGQFGVGFYSGFIVADRITVESRRAGLPASEGVRWASGGAGD FEVEAIERAARGTSVILHLREDAEEFLNAWKIKQVIGKYSDHISLPILMEKEEWKESE KEGEPGQMVKTGEWETVNKASALWTRPKKDITDEQYQDFYKSISHDFENPLTWSHNRV EGNTEYTQLLYIPAKAPFDLWNRDKKAGVKLYVKRVFIMDDAESLMPSYLRFVKGVID SADLPLNVSRELLQESRDVRLIRDGSVKRVLSMLEDLAKHDKHEAAAEGADGVQDVVS AEDKAKEGKYTQFYAEFGAVLKEGLGEDFANRERLAKLLRFASTTSDTPSVSFADYKA RMKEGQEAIYYITADTLAAAKNSPQLEVFKKKGIEVLLMTDRVDEWALNYLQDFDGTP LQSVAKGAVDLGKLQDEAEKKAAEEAAEAFKPVLAKLKEALKDKAEDVRVTTRLVDSP ACLVVQDGGMSTQLARLLKQAGQSAPDAKPVLEVNPEHALVKKLDGSVHFHDLAHILF DQALLAEGGLPEDPAAYVKRVNALLA" gene 482765..483802 /locus_tag="Dtpsy_0467" /db_xref="GeneID:7384054" CDS 482765..483802 /locus_tag="Dtpsy_0467" /note="PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0476 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF03401" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551950.1" /db_xref="InterPro:IPR005064" /db_xref="GI:222109686" /db_xref="GeneID:7384054" /translation="MVNIETCVPIRKGCDMGIKTSLVFSALVWGCSGLALAQNAAAPQ DYPRRPITMVIPAAAGGGTDVVGRVLADELGKRLGQPVVVDNKSGASGMLGANAVARA APDGYTVLVSYSTPVFYAHHMFSKVPYDIRKDFEFITQIAATSLVLMVNANVPVKNMK EFMAWAQQNKGKINYGSYGTGSPGHLMSAYLSDSRKLEMTHVAYKSEAPHIQDLSAGV VSWGMGTLAAAQPQIKAERLRPLAILGPRRLADLPDVPTMAEAGFPDPEFKTIAWFTM LAPAGTPKPILARLEKEAVQIIHSTAMKARLQVFGLEGVEGGAAQFRKDFEASNPIID KLVKISGAKQD" sig_peptide 482765..482878 /locus_tag="Dtpsy_0467" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.739) with cleavage site probability 0.709 at residue 38" gene 483950..484462 /locus_tag="Dtpsy_0468" /db_xref="GeneID:7384055" CDS 483950..484462 /locus_tag="Dtpsy_0468" /note="KEGG: ajs:Ajs_0477 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0477" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551951.1" /db_xref="GI:222109687" /db_xref="GeneID:7384055" /translation="MPWTALLARICAGLVTWFDTTAAAQGKVLWNTLTGFGVSIEPGC NGIEACIVLFAAVIAFPSSLRHKLFGLVAGFAAVQALNVVRVISLFYLGQWNTAVFNF AHEFLWQGLIMLDVLIVWLLWVRAGAKAQPPQDTPPPDEPPAPPMPLVMPRLDKGQGQ VSTSLDLSPR" sig_peptide 483950..484030 /locus_tag="Dtpsy_0468" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.643) with cleavage site probability 0.273 at residue 27" gene 484488..485159 /locus_tag="Dtpsy_0469" /db_xref="GeneID:7384056" CDS 484488..485159 /locus_tag="Dtpsy_0469" /note="KEGG: ajs:Ajs_0478 hypothetical protein" /codon_start=1 /inference="ab initio prediction:Prodigal:1.4" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551952.1" /db_xref="GI:222109688" /db_xref="GeneID:7384056" /translation="MTKPVQSEAPARRPSVLTRFVLYAFGAMIVLTLLWTKASPWLSY PVAWLSHVALEQAAPMWVRGVHQQLGRMEVDTAVEIAVPNSGGRRAEVTLEADPGRYA YGLPIFAALLVAAWGAARAPGRASRAALGYVLLLPAQAFSLVMYLLMQLAGAAQFDVR VLRVDQWQLEAIVYGYQVGVLVLPTLVPVLVWLWLDRQFFTNVIVRGWKQSLAASPAP QRSAG" gene complement(485166..486206) /locus_tag="Dtpsy_0470" /db_xref="GeneID:7384057" CDS complement(485166..486206) /locus_tag="Dtpsy_0470" /note="PFAM: aminoglycoside phosphotransferase; KEGG: ajs:Ajs_0479 serine/threonine protein kinase" /codon_start=1 /inference="protein motif:PFAM:PF01636" /transl_table=11 /product="aminoglycoside phosphotransferase" /protein_id="YP_002551953.1" /db_xref="InterPro:IPR002575" /db_xref="GI:222109689" /db_xref="GeneID:7384057" /translation="MTAPHTDDTLHPYASLTPDLVLDALASVGLYGDGRLMALGSYEN RVYQATLEDGSRVVAKFYRPGRWSEAQILEEHAFSQELADAEVPVVAPLLLHGRSLHR HAGFDFAVSPWRGGRTPELDDFEVLEWLGRYLARIHNVGAARPFAQRPALDLQTLGQE PRDWLLGAQIIPLDQQTEWRDACEQALELIAAGACLSGATGQFGLKDASNIRLHGDCH PGNVLWTPVDDAGHGGPHFVDLDDARMGPAVQDLWMLLSGERRQRTVQLSALLDGYEQ LRPFDRRELALIEPLRTLRLIHYSAWLARRWSDPIFPINFPWFGSSDYWRGQVDMLHE QIEAMQEPPLVA" gene complement(486242..487681) /locus_tag="Dtpsy_0471" /db_xref="GeneID:7384058" CDS complement(486242..487681) /locus_tag="Dtpsy_0471" /note="PFAM: tyrosine protein kinase; aminoglycoside phosphotransferase; UspA domain protein; Serine/threonine protein kinase-related; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: ajs:Ajs_0480 serine/threonine protein kinase" /codon_start=1 /inference="protein motif:PFAM:PF00069" /transl_table=11 /product="serine/threonine protein kinase" /protein_id="YP_002551954.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR002575" /db_xref="InterPro:IPR006016" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR017442" /db_xref="GI:222109690" /db_xref="GeneID:7384058" /translation="MKLLTPGTEIDGFVVHECIHAGGMAHIYRVGYANASRDPGFPMA MKIPRMTAGDGAENIVGFEVELTILPTLSGHHAPRFVAAGDLMRLPYLVMEYVQGDTL QHWLDDRPPGDTAARSAETIARIGGAMALAAHSIHQQNVCHLDLKPANVLLRPDGSVV LLDFGLSCHAHYPDLLAEEMRQAVGSPTWIAPEQVVGVRGDLRSDIFAIGVMLYEMAT GELPFGSPTTQGGMRQRLWMTPAPPRQYRPDLPEWLQEVILRCLEPEAAQRYPSAAHL AFDLANPDQVPITERGRRLRGPGVGAHFKRWIKAAGMHYQPSPLPARQIAEVPILMVA VPHDDVTDATLYSLREAVARSLGIRPGARLACVTVISPSASSTSDSTRSETMLHRTHL ARLKQWAAGLDLSRHSASYHVLEASDVAQALVRYAEGNRVSMMILGAATHGLQLQRFI DTVPIRVARDAPCTVILVKQQLPFDALGQ" gene complement(487724..488482) /locus_tag="Dtpsy_0472" /db_xref="GeneID:7384059" CDS complement(487724..488482) /locus_tag="Dtpsy_0472" /note="PFAM: metallophosphoesterase; KEGG: ajs:Ajs_0481 metallophosphoesterase" /codon_start=1 /inference="protein motif:PFAM:PF00149" /transl_table=11 /product="metallophosphoesterase" /protein_id="YP_002551955.1" /db_xref="InterPro:IPR004843" /db_xref="GI:222109691" /db_xref="GeneID:7384059" /translation="MKIALLSDIHANLPAFDACLEHARAHGAQQFALLGDLVGYGADP GPVLDRAMQLAAAGALCVRGNHDAAALAPPAVAQNLGDQSAQWTHPHLDERQRAFLAG LPLTERLGPDALLVHASADGPERWHYITDSNAAERCMTAATRIDPAIRYVFCGHVHEQ ALYFLTPTAKLMRFSPQPGVPVPVPPHRQWLAIAGSCGQPRDGDTRAMYALFDPDAAT ITFQRVAYNHAAAAAAVRASGLPTFFADRLERGR" gene complement(488613..489029) /locus_tag="Dtpsy_0473" /db_xref="GeneID:7384060" CDS complement(488613..489029) /locus_tag="Dtpsy_0473" /note="TIGRFAM: OsmC family protein; PFAM: OsmC family protein; KEGG: ajs:Ajs_0482 OsmC family protein" /codon_start=1 /inference="protein motif:TFAM:TIGR03561" /transl_table=11 /product="OsmC family protein" /protein_id="YP_002551956.1" /db_xref="InterPro:IPR003718" /db_xref="GI:222109692" /db_xref="GeneID:7384060" /translation="MTTLDKVLYTARAHTTGGRDGASRSDDGRLQVQLSSPGGSGTGT NPEQLFAAGYSACFIGAIKAVAAKQKLTLPQDLAIDAEVDLGTIPNAYGIAARLKVHL PGMDRAQAQQLVNDAHQVCPYSNATRGNIDVTLTLA" gene complement(489091..489558) /locus_tag="Dtpsy_0474" /db_xref="GeneID:7384061" CDS complement(489091..489558) /locus_tag="Dtpsy_0474" /note="PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: ajs:Ajs_0483 MarR family transcriptional regulator" /codon_start=1 /inference="protein motif:PFAM:PF01047" /transl_table=11 /product="transcriptional regulator, MarR family" /protein_id="YP_002551957.1" /db_xref="InterPro:IPR000835" /db_xref="GI:222109693" /db_xref="GeneID:7384061" /translation="MPSPNTVTPPSPPELLLDNQLCFALYSASLAMTKLYKPLLDTLG LTYPQYLVMLALWERDGLTVSELGERLFLDSGTLTPLLKRLESAGLLARLRDVQDERR VRITLTGQGRALRDGAQPIPHCVLARAQCTPADIGALTAQLHGLRDRLAQPQA" gene complement(489867..490667) /locus_tag="Dtpsy_0475" /db_xref="GeneID:7384062" CDS complement(489867..490667) /locus_tag="Dtpsy_0475" /EC_number="4.1.2.20" /note="PFAM: HpcH/HpaI aldolase; KEGG: ajs:Ajs_3719 2-dehydro-3-deoxyglucarate aldolase" /codon_start=1 /inference="protein motif:PRIAM:4.1.2.20" /transl_table=11 /product="2-dehydro-3-deoxyglucarate aldolase" /protein_id="YP_002551958.1" /db_xref="InterPro:IPR005000" /db_xref="GI:222109694" /db_xref="GeneID:7384062" /translation="MPVRNPFKHALAGGQAQIGIWSTLPSPLVTELIAGSGFDWVLLD TEHTPSDVPLMVQQLQAVAAGCRDHTHGVVRPAWNDPVLIKRYLDIGAQTLLLPFVQN ADEARAAVAAMRYAPRGIRGMGGSMRASDFGRDAAYVRDAENELCLLVQVETAEALEQ IEAIAAVEGVDGIFIGPADLSASMGFPGDANHPTVRAAIDDAIRRIRAAGKAPGILVV DEARARECLALGAQFVAVGMDMLLLRQAADGLAARFRPGARGPVTTAY" gene complement(490688..491536) /locus_tag="Dtpsy_0476" /db_xref="GeneID:7384063" CDS complement(490688..491536) /locus_tag="Dtpsy_0476" /EC_number="1.1.1.157" /note="PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: ajs:Ajs_3718 3-hydroxybutyryl-CoA dehydrogenase" /codon_start=1 /inference="protein motif:PRIAM:1.1.1.157" /transl_table=11 /product="3-hydroxybutyryl-CoA dehydrogenase" /protein_id="YP_002551959.1" /db_xref="InterPro:IPR006108" /db_xref="InterPro:IPR006176" /db_xref="InterPro:IPR006180" /db_xref="GI:222109695" /db_xref="GeneID:7384063" /translation="MTISTVGIIGAGTMGNGIAQACAVSGINVVMVDISDAAVQKGVA TVAGSLDRLIKKEKITEADKSAALARIKTSTSYDDLKAAQIVIEAATENYELKLKILK QADALVAPEVIIASNTSSISITKLAAATSRADRFIGMHFFNPVPMMALVEIIRGLQTS DATHDAVKQLSERLGKSPITVKNAPGFVVNRILVPMINEAFFVLAEGLATPEDIDAGM KLGCNQPIGPLALADMIGLDVCLAVMDVYLTEFGDSKYRPCPLLKEMVAAGRLGRKTG RGVYQY" sig_peptide complement(491471..491536) /locus_tag="Dtpsy_0476" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.959) with cleavage site probability 0.914 at residue 22" gene 491649..493244 /locus_tag="Dtpsy_0477" /db_xref="GeneID:7384064" CDS 491649..493244 /locus_tag="Dtpsy_0477" /EC_number="1.1.99.1" /note="PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: ajs:Ajs_3717 glucose-methanol-choline oxidoreductase" /codon_start=1 /inference="protein motif:PRIAM:1.1.99.1" /transl_table=11 /product="Choline dehydrogenase" /protein_id="YP_002551960.1" /db_xref="InterPro:IPR000172" /db_xref="InterPro:IPR007867" /db_xref="GI:222109696" /db_xref="GeneID:7384064" /translation="MREFDYVVIGGGSAGCVLAGRLSEDPTVRVCLLEAGGSDASVLI HCPAGLAAMARSGAFNWGLHTTPQAGLGGRRGYQPRGKVLGGSSSVNAMIYARGHASD YDHWAAAGNAGWGWNDVLPYFLRAEHNERGASAWHGADGPLNVADLQSPQRASRAFVE AGVQAGHPRNDDFNGAQLEGVGLYQVTHRAGERFSVAKAYLTPHLGRTNLQVVTGAQA TRILFAGRRATGVEYRRGGQTQQVRATREVLLSAGALLSPQLLMLSGVGPGAQLQSHG IGVVHDLPGVGAHLHDHPDVVQVMDAPRLTDLFGLSLPGALNVLRGVREWRAHRSGML TTNFAEAGGFIKSRPEEPLPDLQLHFVVGKLLDHGRRATWGHGYSCHVCLLQPRSRGR VTLASADPAAAPLVDPAFFSDPDDMQRMVRGVRRMREILAQPALASLGARELPHSSRA QSDAQIEQFIRDWADTIYHPVGTCRMGCGPLDVVDAQLRVHGLQALRVVDASIMPRIV SGNTNAPTVMIAERAVDLLRQAA" gene 493419..494138 /locus_tag="Dtpsy_0478" /db_xref="GeneID:7384065" CDS 493419..494138 /locus_tag="Dtpsy_0478" /note="KEGG: ajs:Ajs_3716 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_3716" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551961.1" /db_xref="GI:222109697" /db_xref="GeneID:7384065" /translation="MQFNPQEITALAQADAAAPRMDIYAFIHKALRAYMFDTLLGLGR VDAEDDLELSQAGARVLQLLSFCRSHLHHENTFVHPAMERHAPGSTAAVEQEHDGHGQ AIAALADAAQQLMQCPRERRARVAHALYQQLALFVAHNFEHMQLEETAHNAVLWAHYS DAELAAIEGALIASIPADEMLVTLRWMLPSMTPSERAMVLGDMRRNAPPGIFDTALSV MRPHLSNGEWGKLARALELAR" gene 494135..494569 /locus_tag="Dtpsy_0479" /db_xref="GeneID:7384066" CDS 494135..494569 /locus_tag="Dtpsy_0479" /note="KEGG: ajs:Ajs_3715 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_3715" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551962.1" /db_xref="GI:222109698" /db_xref="GeneID:7384066" /translation="MSHGLLRRHTLAAFWLCMASASTLAAGPPPPERFRLTPQLLERM EALQAASPEAARPGDDDEPDAQSVQELARQLDADPRIRALLARHRVSSIEYATAVYAA LHAGMFLAMESLTDKASRTSALASFTPEQRANIELLRRRPIK" sig_peptide 494135..494212 /locus_tag="Dtpsy_0479" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.891 at residue 26" gene complement(494589..495935) /locus_tag="Dtpsy_0480" /db_xref="GeneID:7384067" CDS complement(494589..495935) /locus_tag="Dtpsy_0480" /note="PFAM: GAF domain protein; pyridoxamine 5'-phosphate oxidase-related FMN-binding; SMART: GAF domain protein; KEGG: ajs:Ajs_3714 putative GAF sensor protein" /codon_start=1 /inference="protein motif:PFAM:PF01590" /transl_table=11 /product="putative phytochrome sensor protein" /protein_id="YP_002551963.1" /db_xref="InterPro:IPR003018" /db_xref="InterPro:IPR011576" /db_xref="GI:222109699" /db_xref="GeneID:7384067" /translation="MNVPPTLRSIRACLEGAIPAIMATCAPDGTPNVAYISQVVYVDE QHVALSFQFFNKTRANILANPYASVLVLDPVTARCFRLHLRFLRTEAEGALFERMRAQ LAGIASHNGMAGVFELKGSDVYAVERIEPVPGEGLAPSPAQLPRADLLGAVRLCSQRL ARCTTLDELLQTLLAGLHQHLHVQHAMVLMLDAQAGHLYTVASHGYTHSGVGSEIKLG QGVIGVAAREATPVRISHMTHAALYSHAMRSSLGQSAPAHEIPYPGLPTPHSQLAVPL LSCGRTLGVLFVESPLDLQFRYPEEDALVALAGQLATAIDLLQSADEATEASQEAAPA PAPRGAPVRVRHFAVNDSVFVDDTYLIKGVAGAILWKLLRDHERTGRQDFSNRELRLD PSLRLPGVADNLEARLLLLQRRLQESDTGIHIDKTGRGRLRLRLDAPVQLEEMAGS" gene complement(495932..496423) /locus_tag="Dtpsy_0481" /db_xref="GeneID:7384068" CDS complement(495932..496423) /locus_tag="Dtpsy_0481" /note="KEGG: pol:Bpro_0631 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Bpro_0631" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551964.1" /db_xref="GI:222109700" /db_xref="GeneID:7384068" /translation="MPTLLSAEYIALVDRGVSSIVASRDTQLRPSVMRAVGARISTNG QRITVFLRRSQSRQLLADIATTGHIAVVFSDPPSHRTVQVKATAAVQRAVLPADEPAL QSYLSAMQHAVAQVGYGPQYTAAMLNAPRDDLVAVEFSPEAAFDQTPGPHAGEPLRKE RQP" gene complement(496435..497244) /locus_tag="Dtpsy_0482" /db_xref="GeneID:7382611" CDS complement(496435..497244) /locus_tag="Dtpsy_0482" /note="TIGRFAM: ABC-2 type transporter, NodJ family; PFAM: ABC-2 type transporter; KEGG: ajs:Ajs_3712 ABC transporter" /codon_start=1 /inference="protein motif:TFAM:TIGR01291" /transl_table=11 /product="ABC-2 type transporter, NodJ family" /protein_id="YP_002551965.1" /db_xref="InterPro:IPR000412" /db_xref="InterPro:IPR005981" /db_xref="InterPro:IPR013525" /db_xref="InterPro:IPR013526" /db_xref="GI:222109701" /db_xref="GeneID:7382611" /translation="MPTPTTPSPWRAPDLSTRWWPVFLRNLLVWRKLAVPSLLGNIAE PLMWLVAFGYGMGALVGQVQVGGQNVPYILFLASGSICMSAMNAASFEALYSAFSRMH VQKTWDGIMNAPISLDSVLLAEMLWAAFKALFTTTAILGVMLALGISYSPKLIVAWPV LLCVGIMFSSIALIFNALAKGYDFFTYYFTLVLTPMMFLSGVFFPREQLPTAIRLASD WLPLTNAVELVRPLFMDQWPQHPLRHGLVIAVTTVAAYWVALALTRKRFRA" gene complement(497246..498117) /locus_tag="Dtpsy_0483" /pseudo /db_xref="GeneID:7382774" gene 498287..499546 /locus_tag="Dtpsy_0484" /db_xref="GeneID:7382775" CDS 498287..499546 /locus_tag="Dtpsy_0484" /note="KEGG: ajs:Ajs_3710 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_3710" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551966.1" /db_xref="GI:222109702" /db_xref="GeneID:7382775" /translation="MDTMDTTGFQDTLAVLAGALGSGLLMGIERERRKGQGPLRALAG VRSFTLAAVSGATAALLGSEALVAVGAVFIALLGVVAYARDRSEDPGVTTEIALLLAY LIGVLCTQSLPVAAGLAVAVTSLLAAREALHEFSREWLRQGEVRGGLILAALALLVLP LAPNQPLWGEALNPQVLVRLVVVLLVIQALAHLARRLMDARRANALSALASGFISSTA TIASLGVAVREGREPVRAQGGAAVLSCVATMAQILVVAATVQPQWLVRLWAPALAGGV VALVWGVALLRSMPAGEAPAPADVDGTALFKLRDALLIAALLTAVQVLVQALRGWWGD AGLLAGALVAALADVHAAAAAIMSQGRPLDPVGPSLVSALAAGLSVHAVSKCVTALVS GGWRYAVAAGGGVVLHTLAFVAVLLLL" gene complement(499619..501100) /locus_tag="Dtpsy_0485" /db_xref="GeneID:7382776" CDS complement(499619..501100) /locus_tag="Dtpsy_0485" /EC_number="3.2.2.4" /note="KEGG: ajs:Ajs_3709 AMP nucleosidase; TIGRFAM: AMP nucleosidase; PFAM: purine or other phosphorylase family 1; AMP nucleosidase" /codon_start=1 /inference="protein motif:TFAM:TIGR01717" /transl_table=11 /product="AMP nucleosidase" /protein_id="YP_002551967.1" /db_xref="InterPro:IPR000845" /db_xref="InterPro:IPR011271" /db_xref="GI:222109703" /db_xref="GeneID:7382776" /translation="MAQIPALPDPTFHATETEALAQVQRIYQQQIDHLRSAMQRFVAG ETPAAPVRAFYPFVRVQTSTVARAPTHLAYGFVEGPGRYETTLTRPDLFADYYTEQLR LLRASHNVELEVGVSNQPIPIHFSFAEHDHIEGTLSPERRMLMRDVFDLPDLEAMDDG IANGTWSPRAGEAQPLSLFTAPRVDYSLHRLRHYTGTQPEWFQNFVLFTNYQFYIDEF VRLGHAEMAKPDSEYIAFIEPGNVVTRRTGLPAQVGDDLGVAPARLPQMPAYHLVRAD RSGITMVNIGVGPSNAKTITDHIAVLRPHAWMMLGHCAGLRNSQQLGDYVLAHAYVRE DHVLDEELPLWVPIPALAEIQMALQQAVADVTQMPQDQLKRIMRTGTVASTDNRNWEL LPDNMPQRRFSQSRAVALDMESATIAANGFRFRVPYGTLLCVSDKPLHGEIKLPGMAN HFYRERVDQHLRIGMRAIDILRAGGVHRLHSRKLRSFAEVAFQ" gene complement(501178..503268) /locus_tag="Dtpsy_0486" /db_xref="GeneID:7382777" CDS complement(501178..503268) /locus_tag="Dtpsy_0486" /note="KEGG: ajs:Ajs_3708 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; GGDEF domain containing protein; EAL domain protein" /codon_start=1 /inference="protein motif:TFAM:TIGR00254" /transl_table=11 /product="diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)" /protein_id="YP_002551968.1" /db_xref="InterPro:IPR000014" /db_xref="InterPro:IPR000160" /db_xref="InterPro:IPR000700" /db_xref="InterPro:IPR001633" /db_xref="InterPro:IPR013655" /db_xref="InterPro:IPR013656" /db_xref="InterPro:IPR013767" /db_xref="GI:222109704" /db_xref="GeneID:7382777" /translation="MPSPRPPASPPLPDLGPRASDALLRLIADSVPVMLAYYESTSLR CVFANQRYAAFSGQTVQSIIGKTVREAIGEKAWQEILPYVQRALAGESVQYTREYAGP QGRAHMLEISLQPHFGVREGRNAMVGAFVLINDITHHWEAERAVRQSEERMRKFAIAT EEGLAFHRDGRILDANEALQRMVGYSLAELVGQSIFDFALPEYRALAVEYTRRGSEKP YELAMRHKDGRVIPIEVVGKTMPQQEGDYRVVVVRDITARKQAQEQARFLVLHDTLTQ LPNRRHLMMQLARMASAAQERQTRAAVLFIDLDHFKTVNESLGNQAGDQLLIEIARRL QDGVKATDFVARVGGDQFIVLLPDLANRAAAAEVADALLARVRAEFAIGGTPLSLSPS IGISVFPDDGYSPDELLRRADAAMHHTKESGRGTRMFYEPGMEGQPTELLQQEHLLRE AVFQGAFALHYQPQVRVADGRLVGFEALVRWRHPVRGLVGPDEFIPLAESRGLITPIG RWVLHEACRQLKAWHDEGLPRVPVAVNLSAIEFRQRDVVGEIAQVLQSAGLAPQYLEV EITESALMQQADHTRTTLQALQALGVAVTVDDFGTGYSSLAYLKRYPLDKIKVDRSFV TDTPADSEDVAIVTAIIQLAHSLQLQPVAEGVETAEQLALLRRLGCELAQGFGIAPPM DAQRAREWLRAQAE" gene 503400..504359 /locus_tag="Dtpsy_0487" /db_xref="GeneID:7382778" CDS 503400..504359 /locus_tag="Dtpsy_0487" /note="TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: ajs:Ajs_3707 cation diffusion facilitator family transporter" /codon_start=1 /inference="protein motif:TFAM:TIGR01297" /transl_table=11 /product="cation diffusion facilitator family transporter" /protein_id="YP_002551969.1" /db_xref="InterPro:IPR002524" /db_xref="GI:222109705" /db_xref="GeneID:7382778" /translation="MPSAPSGPLSVPAWMTPHNLLRASVGVALLTIVLKTLAWWVSGS VGLLSDALESFVNLAGAMFALAMVTIARRPADEDHPYGHHKAEYFSSGFEGILIVGAS IAILWAAVLRLMHPQPLEQLGWGMGLSLLSTACNGLLAWGMLRAAQVHRSLALEGDAR HLMTDVWTSIGVVGGLLAAGATGWLWLDPLVAIAVALNILREGGALIWRASQGLMDEA MEPGLLARVFTVLGEHNHASAGVVYFDSLTSRRAGARNYVDLHMHVPAHWTLGHAAEQ RTAVEQALMQAVPGLRATIELLPEGQATVFETAEAAAPGGAGT" gene 504356..504817 /locus_tag="Dtpsy_0488" /db_xref="GeneID:7382779" CDS 504356..504817 /locus_tag="Dtpsy_0488" /note="TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase; KEGG: ajs:Ajs_3706 D-tyrosyl-tRNA deacylase" /codon_start=1 /inference="protein motif:TFAM:TIGR00256" /transl_table=11 /product="D-tyrosyl-tRNA(Tyr) deacylase" /protein_id="YP_002551970.1" /db_xref="InterPro:IPR003732" /db_xref="GI:222109706" /db_xref="GeneID:7382779" /translation="MIGLLQRVREARVEVAGEIVGRIGPGLLALVCAEQGDSEAQADK LLAKMLKLRIFSDEAGKMNRSVQDLDGQGTCGGLLIVSQFTLAADTRGGNRPSFTQAA PPAQGERLYDYFVAQARAVHPMVATGRFAADMQVHLVNDGPVTLPLRIAPG" gene 504827..506236 /locus_tag="Dtpsy_0489" /db_xref="GeneID:7382780" CDS 504827..506236 /locus_tag="Dtpsy_0489" /note="PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: helicase domain protein; DEAD-like helicases; KEGG: ajs:Ajs_3705 DEAD/DEAH box helicase domain-containing protein" /codon_start=1 /inference="protein motif:PFAM:PF00270" /transl_table=11 /product="DEAD/DEAH box helicase domain protein" /protein_id="YP_002551971.1" /db_xref="InterPro:IPR000629" /db_xref="InterPro:IPR001650" /db_xref="InterPro:IPR005580" /db_xref="InterPro:IPR011545" /db_xref="InterPro:IPR014001" /db_xref="InterPro:IPR014014" /db_xref="InterPro:IPR014021" /db_xref="GI:222109707" /db_xref="GeneID:7382780" /translation="MTISSGASPAPSATAFSSLPLSPEMLANLQQLGYAQMTPIQAAS LPFSLQGRDLIAQASTGSGKTAAFGLAMVDRLNPRWFAVQGLVLCPTRELADQVATEI RRLARAQDNIKVVTVYGGVPSRGQIASLENGAHIVVGTPGRVMDLMERGKLDIAKLKT LVLDEADRMLDMGFLADIETVVRQCPAERQTLLFSATYPDGIAGLAQRFMRAPQMVKV AAQHGAGKIAQRWYEVDAREKVDVVARMLAHFRPASSIAFCNTKQQCRNVVTALQSQG FSALALFGELEQRERDEVLVQFANKSCSVLVATDVAARGIDIADLSAVINVDVTPDPE VHIHRIGRTGRGDAEGLALNLVSMDEMGSVGKIELLQGRACEFFPVDELTPTAGGELQ PPMCTIQIIGGRRDKIRAGDVMGAMCADFGYAREQIGKISVNDFSTYVAVDRAIAAQA CAKLNAGRVKGKMVKARLL" gene complement(506264..507040) /locus_tag="Dtpsy_0490" /db_xref="GeneID:7382781" CDS complement(506264..507040) /locus_tag="Dtpsy_0490" /note="PFAM: protein of unknown function DUF81; KEGG: ajs:Ajs_3704 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF01925" /transl_table=11 /product="protein of unknown function DUF81" /protein_id="YP_002551972.1" /db_xref="InterPro:IPR002781" /db_xref="GI:222109708" /db_xref="GeneID:7382781" /translation="MDILGWTTSIGHLALLLTAAFIAGALNAVAGGGSFLTLPALVFT GVPPVVANATGTVALLPGYMAGAWGFREDMQPPPGLSMRAVVVLSLIGGSAGAALLLF TPDATFRKVVPWLLLAATALFAFGPQLRQWAGKAGHGTPSALKAGAGMLAVAAYGGYF NGGLGILLLALFGLLGQTQLNAMNGMKNLVSALLTAIAVAIYAAGGIVLWPQALVMMV AATLGGYGGARVARQLPAPVLRWGIVATGLVMAGLFFLKG" sig_peptide complement(506948..507040) /locus_tag="Dtpsy_0490" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.997) with cleavage site probability 0.819 at residue 31" gene complement(507216..507674) /locus_tag="Dtpsy_0491" /db_xref="GeneID:7382782" CDS complement(507216..507674) /locus_tag="Dtpsy_0491" /note="PFAM: protein of unknown function UPF0054; KEGG: ajs:Ajs_3702 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF02130" /transl_table=11 /product="protein of unknown function UPF0054" /protein_id="YP_002551973.1" /db_xref="InterPro:IPR002036" /db_xref="GI:222109709" /db_xref="GeneID:7382782" /translation="MALNQLSLSLQFARDAEATAHRATLPRHAVARWIRHALAVDAEI TVRIVGAEEGQRLNREFRHKDYATNVLTFDYQQEPVAVADLVLCAPVVEREAREQNKT LEEHYAHLLVHGTLHAQGWDHETSEQDAQEMEVYETAILQELGFADPYAA" gene complement(507740..508747) /locus_tag="Dtpsy_0492" /db_xref="GeneID:7382783" CDS complement(507740..508747) /locus_tag="Dtpsy_0492" /note="PFAM: PhoH family protein; KEGG: ajs:Ajs_3701 PhoH family protein" /codon_start=1 /inference="protein motif:PFAM:PF02562" /transl_table=11 /product="PhoH family protein" /protein_id="YP_002551974.1" /db_xref="InterPro:IPR003714" /db_xref="GI:222109710" /db_xref="GeneID:7382783" /translation="MSFAAPDTRRGTSTGIISVILRHTFTPHNNTRLTHLCGPADVHL RTIEAALQVSIAHRHEQFKVDGPKAKATQAMELLQALYEMADRPIKEEHLQLMLAGDA SMQGDDEASAIQLTTRRADLRARTPTQATYLENIATHDITFGIGPAGTGKTYLAVACA VDALERSSVQRIVLTRPAVEAGERLGFLPGDLTQKVDPYLRPLYDALYDLMGFDRVQK AFERNALEIAPLAFMRGRTLNNAFVILDEAQNTTPEQMKMFLTRIGFGARAVVTGDVS QIDLPKGAMSGLIDAERVLKRVKGIAVTRFTSADVVRHPLVARIVDAYDAQRSRRGAG E" gene 508750..509322 /locus_tag="Dtpsy_0493" /db_xref="GeneID:7382784" CDS 508750..509322 /locus_tag="Dtpsy_0493" /note="KEGG: ajs:Ajs_3700 Holliday junction DNA helicase RuvA; TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: RuvA domain protein; DNA recombination protein RuvA domain I; SMART: Helix-hairpin-helix DNA-binding class 1" /codon_start=1 /inference="protein motif:TFAM:TIGR00084" /transl_table=11 /product="Holliday junction DNA helicase RuvA" /protein_id="YP_002551975.1" /db_xref="InterPro:IPR000085" /db_xref="InterPro:IPR003583" /db_xref="InterPro:IPR011114" /db_xref="InterPro:IPR013849" /db_xref="GI:222109711" /db_xref="GeneID:7382784" /translation="MIGKLTGTLLEKNPPEVLVDCHGVGYEVLVSMSTFYNLPAVGER VSLLTQFIVREDAQLLYGFGTAQERQAFRELIKISGVGPRTALSILSGMGVADLAQAV SLQEAGRLVKVPGIGKKTAERLLLELKGKLGADVGVRAHAANDNQADILQALLALGYN DKEAAAALKALPADVGVSEGIKLALKSLSK" gene 509345..510811 /locus_tag="Dtpsy_0494" /db_xref="GeneID:7382785" CDS 509345..510811 /locus_tag="Dtpsy_0494" /note="KEGG: ajs:Ajs_3699 endoproteinase Arg-C" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_3699" /transl_table=11 /product="endoproteinase Arg-C" /protein_id="YP_002551976.1" /db_xref="GI:222109712" /db_xref="GeneID:7382785" /translation="MQLLTTTAAQWAAIPLVLALSACGGGGGGNDTPSPTPPVAGDRI EPYDPSGTAKVATSQQAVSPVASAQATRTIALGALTAVKGVVSATPGTPLQIGEARSV ADTATVAATAALLRWQPTARGTQAAALRFTADGAHGVRLGVLVQSLPEGAVLRFYGEQ GAGAMEVRASELQDIAARNARGGADDTTARTYWSPDFSGPQTTLEVEIPAAASPAAVR LSVPRLSHFTLAPAQAEQALAQKVGESGSCNVDATCRPEFNDQSRSVARMIFVRDDGK SYLCTGTLLNDAASSGTPYFLSANHCISTQAVASTLTTDWFYRSSTCGTATVNPAAVR VTGGAALLYASATTDTAFMQLNSQAPAGIVYAGSYFGGVGVGTALAGVHHPQGDLQKV SLGSMQRYSTCVDNSCRSSNADDGTFLTLGWQEGTTEGGSSGSAAFVTFGERRYVVGQ LLGGTASCAARDGVDYYGRFDTSYRTALRRWLNPTAAN" sig_peptide 509345..509419 /locus_tag="Dtpsy_0494" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.605) with cleavage site probability 0.322 at residue 25" gene complement(510808..513663) /locus_tag="Dtpsy_0495" /db_xref="GeneID:7382786" CDS complement(510808..513663) /locus_tag="Dtpsy_0495" /note="KEGG: ajs:Ajs_3698 DnaK-related protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_3698" /transl_table=11 /product="DnaK-related protein" /protein_id="YP_002551977.1" /db_xref="InterPro:IPR001023" /db_xref="InterPro:IPR013126" /db_xref="GI:222109713" /db_xref="GeneID:7382786" /translation="MKRYTVGIDLGTSHTACAYAPLEARAADIALLPIPQRLSAGELQ AQPLLPSVRYQAASGELGEAWRQPWPPLEATDDTPATLGRWARDLGAAVPGRLVESAK SWLSHPGVDRTAPILPWGAPQDVARVSPVQASASYLAHVRAAWDAAHPDAPLHAQDLV LTVPASFDEGARALTLEAARLAGLPALQLLEEPKAAFHDWLALQGEQLAAQLAGCRLV LVVDVGGGTTDLTLIRVDTQAGGTPRLTRIAVGEHLMLGGDNMDLALAHLLEPQFAGD GGHLPAARLPAARLPAARFAQLVQRCRQAKELLLADGAPDSAAVTLLGTGSRMLAQTH TATLTRAQVLQCVVEGFLPQVPIGDRPARRQGALRGLGLPYPADAAITRHLAQFLAQH AGGDLPETLLLNGGVFHAPALVQRLTEVLAHWRGAPPRVLHNPHPDWAVARGAAAYGL AQHSSSNTHTAQSGQAPAAPKTIVPRIGGGSARSYWLVLPGKAGTAPQGICLLPRGTE EGVRLVLTSRRFALRLGQAVRFALVARSQGQAQAGQIAPLEGDGWAELPPLATVLPAP EGRATAQVEVQLQACMTEVGTLEVRCVATQEADQSWLLPFAVRGAAGTDGASKSIAAS AEPESGSGQKGSKGRASRLPEALALIDRIFGTQAQDVAPKEVRQLRQSLEKLLGPRAG WDVALLRALFDALLARARRRRRTTEHERTWLNLAGWCLRPGVGAELDAWRIAQVWQLY PQGLGHGQDAANWTEWWVFWRRVAAGLDEAQQMQVLEAVAGCMQKTVQRSQGKAAWGS YDDMLRLFAAMEAVPWQYRQEMGQWMLQRLLRPDESAQTWWAIGRLAARQPLAANAHR VMPPEAAAEFLHATLREDWRHNEHALFAAVQIARMTGDRARDLPDALRTEVLEKMRAT HAPARWIALVEQPTAMEAEDQQRSLGDSLPPGLVLVG" gene complement(513668..514259) /locus_tag="Dtpsy_0496" /pseudo /db_xref="GeneID:7382787" gene complement(514270..516180) /locus_tag="Dtpsy_0497" /db_xref="GeneID:7382788" CDS complement(514270..516180) /locus_tag="Dtpsy_0497" /note="KEGG: ajs:Ajs_3696 putative heat-shock chaperone protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_3696" /transl_table=11 /product="putative heat-shock chaperone protein" /protein_id="YP_002551978.1" /db_xref="InterPro:IPR001023" /db_xref="InterPro:IPR013126" /db_xref="GI:222109714" /db_xref="GeneID:7382788" /translation="MPNTPETIAASAYPASATGKNNAQYSIGIDLGTTHCALSYVDRH ASDGDAVVQQVLDIPQLTGPASVEARPLLPSFLYLPHESELSAADTALPGGGAGQDGV VGELARTRGAATPIRLVSSAKSWLCHPGVDRRAPILPPDAPPEVPRVSPLAASARYLS HLRWAWNQAHPEAPLEHQDITVTIPASFDPAARELTAEACRAAGLERLTLLEEPQAAL YSWIQASGGGWRKQVASGDIILVVDVGGGTTDLSLIAVLEKDGALELQRVAVGEHILL GGDNMDLALAYGVARKLAQEGKPLDAWQTRALAHGCRAAKEQLLADEALPSVPVVVPA RGSKLIGGSIRTEVTRAEVQALLVDGFFPQVAVGDKPLTRARGALTQLGLPYAQDAAV TRHLAAFLSRQLDATAQIPGLAGRQAGGASFLHPTALLFNGGVLKAPQIAERIVGVIN GWLAAEGAAPARLLEGAQLDLAVARGAAYFGHVTAAGRGVRIRGGAAQSYYVGVESNM PAIPGMEPPLSALCLAPFGMEEGTEVALHAQEFGLVVGEPVRLRFFGSSVRRGDTVGT LLDFWGPEELVELQEIEAHLPPDGRTPGEVVPVTLHARVTDIGTLELSAVPVGGHERW KVEFDVRAQTQA" gene complement(516189..516827) /locus_tag="Dtpsy_0498" /db_xref="GeneID:7382789" CDS complement(516189..516827) /locus_tag="Dtpsy_0498" /note="KEGG: ajs:Ajs_3695 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_3695" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551979.1" /db_xref="InterPro:IPR000568" /db_xref="GI:222109715" /db_xref="GeneID:7382789" /translation="MNTPAHPSFLSRMAIAIGSFFAILGNGRLAADIQRLRAGEALAA DVAPPAPQAVRVEVPVETIVEKIVEVRVEVPVEKVVEKRVDVATDTAALQLLGLLQRE ARLVDFLQEDVAPYSDAEIGAAARVVHEGCRKVLREHFTIEAVRPEGEGSHVTLPVGF DATAVRLTGNVLGQAPFTGQLTHRGWKATAVRLPQLTDPRAAAVLAQAEVEL" sig_peptide complement(516735..516827) /locus_tag="Dtpsy_0498" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.953) with cleavage site probability 0.793 at residue 31" gene 517051..518121 /locus_tag="Dtpsy_0499" /db_xref="GeneID:7382790" CDS 517051..518121 /locus_tag="Dtpsy_0499" /note="KEGG: ajs:Ajs_3694 Holliday junction DNA helicase B; TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: magnesium chelatase ChlI subunit; AAA ATPase central domain protein; Holliday junction DNA helicase RuvB domain; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase" /codon_start=1 /inference="protein motif:TFAM:TIGR00635" /transl_table=11 /product="Holliday junction DNA helicase RuvB" /protein_id="YP_002551980.1" /db_xref="InterPro:IPR000523" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR003959" /db_xref="InterPro:IPR004605" /db_xref="InterPro:IPR008823" /db_xref="InterPro:IPR008824" /db_xref="InterPro:IPR011704" /db_xref="GI:222109716" /db_xref="GeneID:7382790" /translation="MTIHTDDFAPSPPPARERVVSAAPASSQEEALERALRPKLLQEY VGQAKAREQLEIFIGAAKKRGEALDHVLLFGPPGLGKTTLSHIIATELGVNLRQTSGP VLEKPKDLAALLTNLERNDVLFIDEIHRLSPVVEEILYPALEDYQIDIMIGEGPAARS IKLDLQPFTLVGATTRAGMLTNPLRDRFGIVARLEFYTPEELARIVMRSAGLLGAPID AEGGMEIARRSRGTPRIANRLLRRVRDYAEVKGSGHITLDIANRALTMLDVDPQGFDV MDRKLLEAVVHRFDGGPVGLDNIAASIGEESGTIEDVIEPYLIQQGYLQRTPRGRVAT LAAYRHLGVAPPRAAGGLFESA" gene complement(518126..519919) /locus_tag="Dtpsy_0500" /db_xref="GeneID:7382791" CDS complement(518126..519919) /locus_tag="Dtpsy_0500" /note="PFAM: fatty acid hydroxylase; YhhN family protein; KEGG: ajs:Ajs_3693 YhhN family protein" /codon_start=1 /inference="protein motif:PFAM:PF07947" /transl_table=11 /product="YhhN family protein" /protein_id="YP_002551981.1" /db_xref="InterPro:IPR006694" /db_xref="InterPro:IPR012506" /db_xref="GI:222109717" /db_xref="GeneID:7382791" /translation="MSGSQIIVLVTPVFLALMALEWAIGRWRGRPALRLADAVSSVSL GMLSQTSAVFTVLLRVGLYTLAYEHLALWRSEAFWTTWYGWLIALVFYDFCYYWLHRM GHEVAVLWAAHAVHHQSQDYNLSTALRQTSSGAVLGWVFYLPMALAGVPPLVFVVVGL VDLLYQFWVHTEQVGRLGWFDRWFCSPSNHRVHHAVNDSYLDKNYGGILIVWDRLFGT FKDEDPREKCVYGTRGLLNSWDPLWANAQVYAGLLHDSWHARRWADKLRVWLKAPGWR PADVAQHFPKPAFNFHDMPLFDPPLSAPLRWFAGVQFVLLLAGVAAFLWQADSAPLAT NAVWFATLLACQWALGAAMQGRIGMGLALMIEAGALATATSALGFTAWHLLFKPLTMA IAIVYVANHAYPMSVTGRFGLHRSFWLLLSALLGSLAGDVFLMLSEHLFIPGLVSFLL AHLCYIALFKQGAGWFGHRGALVGTLALGIGMYAFLWHGGLPAALRVPVAVYVVVIAL MAAQAWGRHAALRERSSLAVALGACCFMLSDSLLATNRFVQPLPLSQLWVLATYYAAQ VLIVSGMVTALTRGAAHQADARTQPLTPHAA" gene complement(520100..521281) /locus_tag="Dtpsy_0501" /db_xref="GeneID:7382792" CDS complement(520100..521281) /locus_tag="Dtpsy_0501" /note="PFAM: alanine racemase domain protein; KEGG: ajs:Ajs_0490 alanine racemase domain-containing protein" /codon_start=1 /inference="protein motif:PFAM:PF01168" /transl_table=11 /product="alanine racemase domain protein" /protein_id="YP_002551982.1" /db_xref="InterPro:IPR001608" /db_xref="GI:222109718" /db_xref="GeneID:7382792" /translation="MRSTPEHLPEHLRATIGLRVDLIDTPALVVDLDAMERNIQRMAE FAHKHQVRWRPHAKMHKSAEIALQLEKAGARGHCVQKVSEAEALAAGGVADLYISNEV LGGAKLLRAARLAAQLAARGGRLGIAVDSEEGITRLSEAMRVAGSDAGIDVFVEIDVG QGRCGVPPGPAALALAQAVAAQPRLHFAGLQAYHGSAQHLRSAAERRAAIAHAVQAAA DTRALIEAAGLPVPLVTGSGTGTLVHEAASGVYGELQAGSFLFMDADYAANERESAQP AFEHALFVKTQVISARPTHVVCDAGHKSHAVDSGMPLVWGLPPERALRYANGGDEHGV LHATGPKARLPALGRMLWLVPGHCDPTVNLHDYLIGVRGGLAHGVVERVIRVDARGAV T" gene complement(521265..521909) /locus_tag="Dtpsy_0502" /db_xref="GeneID:7382793" CDS complement(521265..521909) /locus_tag="Dtpsy_0502" /note="PFAM: Phosphoglycerate mutase; KEGG: ajs:Ajs_0491 phosphoglycerate mutase" /codon_start=1 /inference="protein motif:PFAM:PF00300" /transl_table=11 /product="Phosphoglycerate mutase" /protein_id="YP_002551983.1" /db_xref="InterPro:IPR013078" /db_xref="GI:222109719" /db_xref="GeneID:7382793" /translation="MHATRIIAIRHGETAWNVDTRIQGHLDIPLNDTGLWQARQVGQA LADEAVAAIYSSDLQRAYATAEAVARTTGAPLTPVPGLRERSFGSFQGRTFQQIETES PEQALRWRKRDPHFVPDGGGESLDMLRERIAVTVDGIAARHAGEQIVLVAHGGVMDVL YRLATRLDLQAPRTWQLTNAAINRLLWTEGNGLTLVGWADTQHLENASRDEIHS" gene complement(521932..522396) /locus_tag="Dtpsy_0503" /db_xref="GeneID:7382794" CDS complement(521932..522396) /locus_tag="Dtpsy_0503" /note="KEGG: ajs:Ajs_0492 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0492" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551984.1" /db_xref="GI:222109720" /db_xref="GeneID:7382794" /translation="MRSSIRHLVLCACLGPVSLVAQASGLGDTLRGATSGGASPSTLG GMLGGGAAPSALSAMGLSGSATPSNAAGVITYCMKNNYLNADKAALVKQQLLGKMGLG AAQPEPRDEGYLSGLSGMVSGSNGKQFNLNRLKGDLKEKACDFVLDNASSLL" sig_peptide complement(522325..522396) /locus_tag="Dtpsy_0503" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.972 at residue 24" gene complement(522424..523038) /locus_tag="Dtpsy_0504" /db_xref="GeneID:7382795" CDS complement(522424..523038) /locus_tag="Dtpsy_0504" /note="KEGG: ajs:Ajs_0493 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0493" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551985.1" /db_xref="GI:222109721" /db_xref="GeneID:7382795" /translation="MAFLRHIPALALCAAAALLAGCAGPRLVESDVSSFSTLSALPSP PTYRFERLPSQQAQAAAFAPIEAQAEQALARVGLRRDDTQPRLVAQIGAEGGYATPRY WPYAPDPFYGRFGWGLGYGGGWGFGGMGWMMDGPPTLYHRKVSLMLRDAASQQVVYET SAVYEDVWTDDPAIYGVLFDQALTGFPRPPAGQRKVRTEITPQR" sig_peptide complement(522952..523038) /locus_tag="Dtpsy_0504" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.594 at residue 29" gene complement(523104..524057) /locus_tag="Dtpsy_0505" /db_xref="GeneID:7382796" CDS complement(523104..524057) /locus_tag="Dtpsy_0505" /note="PFAM: PP-loop domain protein; KEGG: ajs:Ajs_0494 PP-loop domain-containing protein" /codon_start=1 /inference="protein motif:PFAM:PF01171" /transl_table=11 /product="PP-loop domain protein" /protein_id="YP_002551986.1" /db_xref="InterPro:IPR011063" /db_xref="GI:222109722" /db_xref="GeneID:7382796" /translation="MNTANNTLPTAADWAGEDGAPDAADTRKIERESHKLEKRLCREV GRAITDFNMIEEGDKIMVCMSGGKDSYTLLDILRKLQKRAPVKFDIVAVNLDQKQPGF PEHVLPDYFKSIGVQYHIENQDTYSVVKRVVPEGKTTCSLCSRLRRAILYKVADDLGC TKLALGHHRDDIVATLMLNMFYGGRMKGMPPKLVSDDGKHVVIRPLCYVPEKDTARWA QYQQFPIIPCNLCGSQDGLQRVAVNEMLREWDKKFPGRIESMLRAMGHVVTTHLMDPH LHDFKNAKATGIADPNGDMAFDHEEFPVAPALPGLQVVQLG" gene complement(524062..524454) /locus_tag="Dtpsy_0506" /db_xref="GeneID:7382797" CDS complement(524062..524454) /locus_tag="Dtpsy_0506" /note="PFAM: dihydroneopterin aldolase; KEGG: ajs:Ajs_0495 dihydroneopterin aldolase" /codon_start=1 /inference="protein motif:PFAM:PF02152" /transl_table=11 /product="dihydroneopterin aldolase" /protein_id="YP_002551987.1" /db_xref="InterPro:IPR006157" /db_xref="GI:222109723" /db_xref="GeneID:7382797" /translation="MTIFSHPARPGEGLQALTLTGLRFDANLGILAHEKNAPQPIQVD AELNLGTQPLAPRDDDIQHVLDYRKVRQIIIDECTAEHVNLLESLIGKLANRLMQLPG VLGVRVKIAKLEIFDDCEVAIRVETGQW" gene complement(524459..524872) /locus_tag="Dtpsy_0507" /db_xref="GeneID:7382798" CDS complement(524459..524872) /locus_tag="Dtpsy_0507" /note="PFAM: dihydroneopterin aldolase; KEGG: eugene3.214320002;." /codon_start=1 /inference="protein motif:PFAM:PF02152" /transl_table=11 /product="dihydroneopterin aldolase" /protein_id="YP_002551988.1" /db_xref="InterPro:IPR006157" /db_xref="GI:222109724" /db_xref="GeneID:7382798" /translation="MNSILLAFGALDARLATHCRALSLRRHEVAVRIGVHAHERQAAQ RMWFDVDLCVKLDHAPAARDDISQTVDYDFIRDIVAREVGSHHHELQESLCDAIAQAI LQRPEVHAVRVATRKPDVYPDSASVGVERVCIKPW" gene complement(524869..525664) /locus_tag="Dtpsy_0508" /pseudo /db_xref="GeneID:7382799" gene complement(525661..526443) /locus_tag="Dtpsy_0509" /db_xref="GeneID:7382800" CDS complement(525661..526443) /locus_tag="Dtpsy_0509" /codon_start=1 /inference="ab initio prediction:Prodigal:1.4" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551989.1" /db_xref="GI:222109725" /db_xref="GeneID:7382800" /translation="MSDSSASSSLQPSSELVRWLQSLALPLWARGTLVIVFLAVMSGG LALVVWGAWNRDREAMTAAIGLLTVALPVSLVVIGLVFGQRSERRLAQLTHAVLDVQI PAQVQQLAGTPRGLLLTPLARTGCRATYRLSAPAGQRGLHHPLQFSVELNVRKVNVMF SLPEPIAPQGPLAEHPALASYQHVIAGARAEGYRLNHELADYGGDDGGRALLFYRTLP EDFLLRPIERLYFTQDLGFFVRGIVEAQEAAQAGAAVREARA" gene 526479..527567 /locus_tag="Dtpsy_0510" /db_xref="GeneID:7382801" CDS 526479..527567 /locus_tag="Dtpsy_0510" /note="PFAM: protein of unknown function DUF185; KEGG: ajs:Ajs_0497 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF02636" /transl_table=11 /product="protein of unknown function DUF185" /protein_id="YP_002551990.1" /db_xref="InterPro:IPR003788" /db_xref="GI:222109726" /db_xref="GeneID:7382801" /translation="MTALTPSLFEHIRQRITAQGGWIGFDRFMALALYTPGLGYYAGD LPKFGAMPASGSDFVTAPELSPVFGSVLARQVREALDATATDEVWEFGAGSGALAAQL LGALGDRVRRYTIVDLSGSLRARQQATLAAWGDRVHWVDRLPDQIQGVVVGNEVLDAM PVQLLQRRAGLWHERGVALDESGNGFVWQDRPTPLRPPVEIDGPHDYLTEIHPQGEAF MRTLAQHLVRGAAFLIDYGFGEDEYYHPQRHMGTLVCHRGHQVDSDPLADVGLKDITA HVNFTAMALAAQDAGLQVLGYTTQAHFLINCGLLSELERLTQAQRAQAAKLMMEHEMG ELFKVLAVGAGEPWRPMGFAQGDRSHRL" gene 527683..528582 /locus_tag="Dtpsy_0511" /db_xref="GeneID:7382802" CDS 527683..528582 /locus_tag="Dtpsy_0511" /EC_number="1.14.11.17" /note="PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: xcv:XCV0883 taurine dioxygenase" /codon_start=1 /inference="protein motif:PRIAM:1.14.11.17" /transl_table=11 /product="Taurine dioxygenase" /protein_id="YP_002551991.1" /db_xref="InterPro:IPR003819" /db_xref="GI:222109727" /db_xref="GeneID:7382802" /translation="MSALPHDPGLASQASQEFEIRRLPAPLGAEVLGLDLAQPLSDAD FDRILRAHWEHVVLVFRNQRITPAQQVAFSRRFGPLQIHVQRKFALQGHPEVLVVSNI RDENGEPTGLGDAGSLWHSDLSYKDKPSLGSLLHAQELPNVGGDTLFADQYAAYDALP EATQQRIAHLRAEHSYLARYEELRQRNPWRPRLTPAQIAEVAPAVHPVVRTHPATGRK ALFVSEHFTTRILDLPEEESRALLQELFAASVRPEFVYRHQWQPHDLVFWDNRAVLHL AAGTPDTERRKLYRTTVEGDAPR" gene 528678..529778 /locus_tag="Dtpsy_0512" /db_xref="GeneID:7382803" CDS 528678..529778 /locus_tag="Dtpsy_0512" /note="KEGG: bph:Bphy_3603 nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Bphy_3603" /transl_table=11 /product="nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein" /protein_id="YP_002551992.1" /db_xref="GI:222109728" /db_xref="GeneID:7382803" /translation="MTTLPSATPTPQSHSPVHGPLRHFFLRFLRRATRRGAVLCSVAG LLLGAHGVAQAAEGQLRIAQQFGIVYLLLNVAQDQKLIEKHGKVAGVDIRVEFVKLSG GAVINDALLAGSIDIAGAGVGPLFTLWDRTRGRQNVKGVASLGNFPYYLVSNNPAVKT IADFTDKDRIALPAVGVSVQSRILQLASAQRWGDPAFNRLDKLQVALPHPDAAAAIIK GGTEITAHFGNPPFQEQELAANPAAHIVLKSYDVLGGPASATVLYATEKFRNDSPKTY RALLDALDEAARFIAAQPEQAADIYLRTHGGNTDRQLLLQVLKNPEVQFQIRPQNTLG LGQFLHRVGALKHQPVALQDYFFDDPRIAGGN" sig_peptide 528678..528845 /locus_tag="Dtpsy_0512" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.994 at residue 56" gene 529778..530719 /locus_tag="Dtpsy_0513" /db_xref="GeneID:7382804" CDS 529778..530719 /locus_tag="Dtpsy_0513" /note="PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cti:RALTA_B1991 putative taurine transporter, ABC superfamily, atp_binding component" /codon_start=1 /inference="protein motif:PFAM:PF00005" /transl_table=11 /product="ABC transporter related" /protein_id="YP_002551993.1" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR017871" /db_xref="GI:222109729" /db_xref="GeneID:7382804" /translation="MRTAFQGEASGATAWGGPPGASPGHQPAVHPASHPVSAASAVPA PLLQVQGVSLDYRTHERVVRATHQVSFDVHAGERYVLLGASGCGKSTLLKSIAGFIAP AEGTVRLQGRAVAAPGPDRVVVFQEFDQLPPWKTVRENVMFPLLASRRATRAEAAERA ALYLDKVGLARFADVHPHQLSGGMKQRVAIARALAMQPQVLLMDEPFAALDALTRRRM QEELLALWDELRFTLVFVTHSIEEALVVGSRIAILSPHPGRLRAEINCHQYGLHSAGS ADFQATAQRVHALLFDEPVHGAAPSDAPHAPVPPTFA" gene 530729..531631 /locus_tag="Dtpsy_0514" /db_xref="GeneID:7382805" CDS 530729..531631 /locus_tag="Dtpsy_0514" /note="PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mms:mma_2483 ABC-type sulfonate/nitrate transport system permease protein" /codon_start=1 /inference="protein motif:PFAM:PF00528" /transl_table=11 /product="binding-protein-dependent transport systems inner membrane component" /protein_id="YP_002551994.1" /db_xref="InterPro:IPR000515" /db_xref="GI:222109730" /db_xref="GeneID:7382805" /translation="MSLPTSSVSAAPFALHPPVRPEVLHTLPPLGRVAPAQPLPLGRR LWQQGALRKALILAVLALLWEGVARWQDNDLLLPTFLQTAQAFAQGVASGELLHKTAL SLAVLLKGYLAGIACAFVLTTLAVSTQLGRDLLSTLTAMFNPLPAIALLPLALLWFGL GQGSLVFVLVHSVLWPLALNTYAGFQGVPETLRMAGRNYGLKGLRYVLQLLVPAALPS ILSGLKIGWAFAWRTLIAAELVFGASSGQGGLGWYIFQNRNELYTDKVFAGLAMVIAI GLAVENLGFHTLERLTVRRWGVQR" gene 531928..532122 /locus_tag="Dtpsy_0515" /db_xref="GeneID:7382806" CDS 531928..532122 /locus_tag="Dtpsy_0515" /note="KEGG: ajs:Ajs_0499 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0499" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002551995.1" /db_xref="GI:222109731" /db_xref="GeneID:7382806" /translation="MLRWLLVVFLALVLINGLTPWLRRLGLGRLPGDFQFRLFGRDWF IPLASTVLLSFLLSLAVKWL" gene 532219..533229 /locus_tag="Dtpsy_0516" /db_xref="GeneID:7382807" CDS 532219..533229 /locus_tag="Dtpsy_0516" /note="PFAM: ROK family protein; KEGG: ajs:Ajs_0500 glucokinase" /codon_start=1 /inference="protein motif:PFAM:PF00480" /transl_table=11 /product="ROK family protein" /protein_id="YP_002551996.1" /db_xref="InterPro:IPR000600" /db_xref="GI:222109732" /db_xref="GeneID:7382807" /translation="MMGPMPQQLPTSQSPGLHAGVDIGGTKVAVCLADPANGSGPPVL LTRMAEPTAKAGAPDALAQQVLRLLDAACTQQGITRSDLAGVGVASCGPFVRHAGMVE VVNPNICGGLAGAPRGLGNDWTRVPLQAPLAQALRADRVHVANDAVAALQAERLWGAL RGEDDCAYVTWSTGIGVGLCVDGCVLRGKNGNAGHAGHSYVGDPDAGSDVALCGCGNQ GDVESLVAGSALPRRLGREAPALMAAADAGDAAALAEVQALCVLMGRLLYNLVATLDL RRISLGGAVFLHHQALLLPLLRAQLARYFPALTAGVELVPAGLGGQVGDYAALALLQQ PG" gene complement(533306..534724) /locus_tag="Dtpsy_0517" /db_xref="GeneID:7382808" CDS complement(533306..534724) /locus_tag="Dtpsy_0517" /EC_number="2.4.1.15" /note="KEGG: ajs:Ajs_0501 alpha,alpha-trehalose-phosphate synthase (UDP-forming); TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming]; PFAM: glycosyl transferase family 20" /codon_start=1 /inference="protein motif:TFAM:TIGR02400" /transl_table=11 /product="alpha,alpha-trehalose-phosphate synthase (UDP-forming)" /protein_id="YP_002551997.1" /db_xref="InterPro:IPR001830" /db_xref="InterPro:IPR012766" /db_xref="GI:222109733" /db_xref="GeneID:7382808" /translation="MSRLVVISNRLADPRKSAAGGLAVALGDALARTGGLWFGWSGTV TPDGTPGEGALQTHQAGNVTLATVDLCQADHAAYYQGYANSVLWPVLHYRLDLADFSA NYSEGYRRVNQMFARKLLPLLREDDVIWVHDYHLIPLAAELRALGCRQRIGFFLHVPV PPPLILAALPQHEWLMRSFFAYDLVGLQSEADVVHFTRYMVNEAQAQELGGQRLRAFN ATLRVAAFPIGIDVQEFQRLGRAPDAVQTCEALRAEYSRRQLLLGIDRLDYSKGIPHR VRAFRQLLERYPENEHSATLVMIASPSRDDVHAYADLRQELEGLCGAINGDYGDLDWM PLRYIHRTVARKRVPGLCRAARVGLVTPLRDGMNLVAKEYVVAQEPEDPGVLVLSRFA GAAEQLKEALLVNPYDTQGMADAIQTALRMPLSERQWRHERLMERIQRQDVHWWRNSF LQALRDEAAPPVTAPAGAVAAT" gene complement(534741..536561) /locus_tag="Dtpsy_0518" /db_xref="GeneID:7382809" CDS complement(534741..536561) /locus_tag="Dtpsy_0518" /note="PFAM: glycoside hydrolase 15-related; KEGG: ajs:Ajs_0502 glycoside hydrolase 15-related" /codon_start=1 /inference="protein motif:PFAM:PF00723" /transl_table=11 /product="glycoside hydrolase 15-related" /protein_id="YP_002551998.1" /db_xref="InterPro:IPR011613" /db_xref="GI:222109734" /db_xref="GeneID:7382809" /translation="MTSKASHVGATAMAAPSLALGMIGNCTISALVDARACIVWSCMP RFDGDPVFNALVQPGPDGSRFAIELEDFARSEQWYEPNTAVLRTHLTDAHGNCLEVTD FCPRFFARSRAFRPVMLVRRVRPVRGAPRIRVLVQPRYDWGMAQPALTRGSNHIRYVG GDFTLRLNTDAPVAYVLSGEPFVAGREYNFLLGADETLSGGIGDTARHYEQETVSYWK HWTQRLHLPLQWQEAVIRSAITLKMSLFEDTGAIVAAMTTSIPESAHSGRNWDYRYCW LRDAFFVVRALNSLSEVGTMEDYLRWLGNIVAKTGSGHIQPLYGIGLEHELPESVLPH LAGYRGMGPVRVGNQAAEHFQHDVYGNIVLGAAQSFHDRRLLHPAGAAEFERLERVGE LAVQVYGKPDAGMWELRTRARIHTSSALMSWAACDRLAKIARALQLPERAHYWQQHAQ RMHGEILERSWHAKRQVFAESFGGSELDASVLLMAEVGLIHPTDPRFVSTLDAMEHTL CDGPFMRRYEAADDFGKPETAFNICTFWRIDALARTGRREQAQEIFEAMLAVRNPLGL LSEDTHAATGEMWGNFPQTYSMVGIINAAMRLSAPWDSVI" sig_peptide complement(536496..536561) /locus_tag="Dtpsy_0518" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.924) with cleavage site probability 0.410 at residue 22" gene complement(536558..537289) /locus_tag="Dtpsy_0519" /db_xref="GeneID:7382810" CDS complement(536558..537289) /locus_tag="Dtpsy_0519" /EC_number="3.1.3.12" /note="KEGG: ajs:Ajs_0503 HAD family hydrolase; TIGRFAM: trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB; PFAM: trehalose-phosphatase" /codon_start=1 /inference="protein motif:TFAM:TIGR00685" /transl_table=11 /product="trehalose-phosphatase" /protein_id="YP_002551999.1" /db_xref="InterPro:IPR003337" /db_xref="InterPro:IPR006379" /db_xref="GI:222109735" /db_xref="GeneID:7382810" /translation="MPTPPLPTSRHALFLDFDGTLADIAAQPHAVQLPPGVVDCLQAL HVRLEGALAIVTGRTMADIDHFLDPLRLPVACEHGAQYRLGNGRSGGLPALPLQPLLA ALRPLMAQHPELLLEAKSAGLALHYRQAPQLQALCLQAITQALREVPGAELLHGKFVY EVKPVGPDKGRAITDFMRLAPFAGRAPLFVGDDVTDEAGFAAAQSLGGLGIKVGEGAT RAHARLATPAAVRQWLQHAVGEEIT" gene 537416..537853 /locus_tag="Dtpsy_0520" /db_xref="GeneID:7382811" CDS 537416..537853 /locus_tag="Dtpsy_0520" /note="TIGRFAM: thioredoxin; MJ0042 family finger-like protein; PFAM: Thioredoxin domain; KEGG: ajs:Ajs_0504 thioredoxin" /codon_start=1 /inference="protein motif:TFAM:TIGR01068" /transl_table=11 /product="thioredoxin" /protein_id="YP_002552000.1" /db_xref="InterPro:IPR005746" /db_xref="InterPro:IPR006662" /db_xref="InterPro:IPR011723" /db_xref="InterPro:IPR013766" /db_xref="InterPro:IPR017937" /db_xref="GI:222109736" /db_xref="GeneID:7382811" /translation="MSSPEALHVVCPHCHTTNRVQAAQLGSAPDCGSCHRPLFTGEPL ALDAASFDRHVARSHLPVVVDFWAPWCGPCRQMAPAFAQAARELEPRVRLAKLDTEAH PAIAARYGIRSIPTMILFRGGQEAARISGALGAADIARWVQSV" gene complement(537985..539262) /locus_tag="Dtpsy_0521" /db_xref="GeneID:7382812" CDS complement(537985..539262) /locus_tag="Dtpsy_0521" /note="PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; KEGG: ajs:Ajs_0505 metal dependent phosphohydrolase" /codon_start=1 /inference="protein motif:PFAM:PF01743" /transl_table=11 /product="polynucleotide adenylyltransferase/metal dependent phosphohydrolase" /protein_id="YP_002552001.1" /db_xref="InterPro:IPR002646" /db_xref="InterPro:IPR006674" /db_xref="GI:222109737" /db_xref="GeneID:7382812" /translation="MQIYMVGGAVRDRLLGRPVNDHDWVVVGATPDDMVARGYLPVGR DFPVFLHPETREEYALARTERKSGRGYRGFVVQTSPDVTLEEDLSRRDLTINAIAASA DWTGAEDLFDPYGGARDLQARVLRHVTDSFREDPVRILRVARFAARFTDFTVAPETMQ LMREMVHDGEADHLVPERVWQELARGLMEPQPSRMFDVLRDCGALAVVLPEVERLWGV PQRPEYHPEVDTGVHLMMVLDMAAHLQAPLTVRFACLTHDLGKGTTPHDVLPRHIGHE QRSARLLKAVCERLRVPVECRELADVVAREHGNIHRSGDLGAAALVRLLERCDAIRKP ARLDEILLACECDARGRLGFADRPYPQRARINAALAAVQSVTTSSVAAHAAQLGLSGP KVGEMIHAARVQAVADWLHATAQPAPEPRGNAG" gene complement(539568..540335) /locus_tag="Dtpsy_0522" /db_xref="GeneID:7382813" CDS complement(539568..540335) /locus_tag="Dtpsy_0522" /note="PFAM: metallophosphoesterase; KEGG: ajs:Ajs_0506 metallophosphoesterase" /codon_start=1 /inference="protein motif:PFAM:PF00149" /transl_table=11 /product="metallophosphoesterase" /protein_id="YP_002552002.1" /db_xref="InterPro:IPR004843" /db_xref="GI:222109738" /db_xref="GeneID:7382813" /translation="MKLHILSDLHLGVQGMEHPRTDADVVILAGDIARPAAAVAWAQG FAKPVLYVPGNHEFYGSSLQDTAQELRRLCEGSPVHLLDNRSLVLQGVRFIGSTLWSD FRVAGDGAARTEAMAQAQQFMRDFSRIRAGGADGGALFTPQHAADLFDANARWLAREL AQPFAGPTVVITHHAPSPHSIHPRFAGSPINAAFVSDAQTLVEGSGARLWVHGHTHDS FDYRLHGTRVLCNPRGYAKDGQVENTRFNPHLVVEVA" gene complement(540353..541039) /locus_tag="Dtpsy_0523" /db_xref="GeneID:7382814" CDS complement(540353..541039) /locus_tag="Dtpsy_0523" /note="PFAM: Glutathione S-transferase domain; KEGG: ajs:Ajs_0507 glutathione S-transferase domain-containing protein" /codon_start=1 /inference="protein motif:PFAM:PF02798" /transl_table=11 /product="Glutathione S-transferase domain protein" /protein_id="YP_002552003.1" /db_xref="InterPro:IPR004045" /db_xref="GI:222109739" /db_xref="GeneID:7382814" /translation="MLQLYIGNKNYSSWSMRPWVLLRQAGIAFEEVPVRFDSFDANSQ FKRQLKAVTPVAKVPVLVDGDITVWDSLAIAEYLAEQYPDKHLWPQDKAARARARSVV AEMHSGFSALRSHCGMNIEARLPEVGEIVWRDQPAVRADVQRLVEMWSELLDQHGGPM LFGQFSIADAFYAPVCMRLATFALPVPEHITAYVQRVQQLPGVKAWIDGALAEQDFVP FDEPYRARRG" gene complement(541169..541741) /locus_tag="Dtpsy_0524" /db_xref="GeneID:7382815" CDS complement(541169..541741) /locus_tag="Dtpsy_0524" /note="TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: ajs:Ajs_0508 5-formyltetrahydrofolate cyclo-ligase" /codon_start=1 /inference="protein motif:TFAM:TIGR02727" /transl_table=11 /product="5-formyltetrahydrofolate cyclo-ligase" /protein_id="YP_002552004.1" /db_xref="InterPro:IPR002698" /db_xref="GI:222109740" /db_xref="GeneID:7382815" /translation="MDKAALRRALVEQRLNLPDRLQRADQLQRVMRIWLVDRPDTIIG AYWPIKGEFDPLPALHRWKEDGELLDEPQLRRIGLPVVDKVHKTLTFHAWYPGCPMEE DAYGIPKPKDTELIHPTLLFVPCVGYGPGGYRLGYGGGFYDRTLATLQPRPATVGLGF THGYLDDFEPEAHDLPLDAILNDNGVVWPV" gene 541765..543738 /locus_tag="Dtpsy_0525" /db_xref="GeneID:7382816" CDS 541765..543738 /locus_tag="Dtpsy_0525" /note="PFAM: Lytic transglycosylase catalytic; KEGG: ajs:Ajs_0509 lytic transglycosylase, catalytic" /codon_start=1 /inference="protein motif:PFAM:PF01464" /transl_table=11 /product="Lytic transglycosylase catalytic" /protein_id="YP_002552005.1" /db_xref="InterPro:IPR008258" /db_xref="GI:222109741" /db_xref="GeneID:7382816" /translation="MKILTPLIAGAALATAAPWAGAQNRGDDTVLEMQKAFRKGDKQR LAALLPGARGHALEPWAAYWELRARLEEAQPSEVTAFLQRWAGTYQEDRLRNDWLLLL GQRRDWDQFAEFHPQFRMGDDREVHCYALAIEQIKGTAAESAGAEMLRHWYALRELDD GCSSAAAEMLAAKKIKPLDVWRKARLGAEANRLRVVRKAVEIVAPDALPQLREALDSP TKYLTGRATARGKERQELVVLALTRMAMSDVANAASLLDSKWGPHLSAEERNWLWGLI GKQAATALSPDALSYYANVGRDADLTDDMLAWRTRAALRAGQWKLVGRSIDAMSPAAR QESVWTYWKARALMANRPGDEDRAAARQLYARIAGTTGFYEQLALEELGERVTQPPAP APLTEEEKATARANPGLNRALYAILMGLRSEGVREWNYTTNLHTPGGMGERELLAAAD FACQREVWDRCINTSERTKGVIDAAQRFPMPFRSAVVERARGIGLDPAYVYGLIRQES RFIMDARSGVGASGLMQVMPATARWTARKIGLEGFSPQQLYDRDTNITIGTAYLKLAL DDFDGSMPLAAAAYNAGPGRPRNWRNGPVLDAAIWAENVPFSETRDYVKKVLANTVNY AAILTGQPQSLKSRLGTVGPRDARAPEPNKDLP" sig_peptide 541765..541827 /locus_tag="Dtpsy_0525" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.818 at residue 21" gene complement(543814..544386) /locus_tag="Dtpsy_0526" /db_xref="GeneID:7382817" CDS complement(543814..544386) /locus_tag="Dtpsy_0526" /note="PFAM: cytochrome B561; KEGG: ajs:Ajs_0510 cytochrome b561" /codon_start=1 /inference="protein motif:PFAM:PF01292" /transl_table=11 /product="cytochrome B561" /protein_id="YP_002552006.1" /db_xref="InterPro:IPR011577" /db_xref="GI:222109742" /db_xref="GeneID:7382817" /translation="MSAFKTDGARATGATLRVWDRPVRLLHWGLAACVAMAWWSSDDT GPLHERVGYVALALLAARVAWGFGGSRYARFAQFVRTPAATLAYARLALAGHAPRYLG HNPLGAWMVLALLAIMALLGFTGWLYTTDRFWGYGWLAHLHQYLGWALLACVALHVGG VLWTCLQHRENLVRAMVTGRKAPPRGDDVA" gene complement(544367..544636) /locus_tag="Dtpsy_0527" /db_xref="GeneID:7382818" CDS complement(544367..544636) /locus_tag="Dtpsy_0527" /note="KEGG: ajs:Ajs_0511 putative signal peptide protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0511" /transl_table=11 /product="putative signal peptide protein" /protein_id="YP_002552007.1" /db_xref="GI:222109743" /db_xref="GeneID:7382818" /translation="MTSWIPHIAALALAVSASSAFAHGKVTCPEHPPAEWRPHTELEQ KLVKEGWTVRRMEKTETCYEVYGKDPQGKRVEAFFDPKTLERVQD" sig_peptide complement(544568..544636) /locus_tag="Dtpsy_0527" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.959 at residue 23" gene complement(544695..545378) /locus_tag="Dtpsy_0528" /db_xref="GeneID:7382819" CDS complement(544695..545378) /locus_tag="Dtpsy_0528" /note="PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; KEGG: ajs:Ajs_0512 putative hydroxylase" /codon_start=1 /inference="protein motif:PFAM:PF03171" /transl_table=11 /product="2OG-Fe(II) oxygenase" /protein_id="YP_002552008.1" /db_xref="InterPro:IPR005123" /db_xref="InterPro:IPR006620" /db_xref="GI:222109744" /db_xref="GeneID:7382819" /translation="MLISIDQVLSKTEVRDLRAQLDAAAWEDGAATAGTLAKSVKRNQ QINDGSELCQRLGQHILRRLSSTPLFISAALPRTIYPPKFNRYADGGTYGAHVDSALM FLPGSHQQMRTDLSATLFLAEPEEYDGGELEVEGPFGVQAVKLAAGDMVLYPSSSLHR VTPVTRGARVASFFWIESLVQDEGERTLLFDLDQSIQQLTPLVAPDDPRLVQLTGVYH NLLRRWARP" gene complement(545372..546499) /locus_tag="Dtpsy_0529" /db_xref="GeneID:7382820" CDS complement(545372..546499) /locus_tag="Dtpsy_0529" /EC_number="1.1.3.15" /note="PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: ajs:Ajs_0513 (S)-2-hydroxy-acid oxidase" /codon_start=1 /inference="protein motif:PRIAM:1.1.3.15" /transl_table=11 /product="(S)-2-hydroxy-acid oxidase" /protein_id="YP_002552009.1" /db_xref="InterPro:IPR000262" /db_xref="GI:222109745" /db_xref="GeneID:7382820" /translation="MGKRWQLSNLMTPHIPAGVWNAIDYERLAPQHMDAGRLAYVAGG CGWDRTVAANCAAFAAWAIVPRLLRDVRGGHTRLTLGGLDLPHPLLLAPVAHQRLAHS EAEVATARAAQATGTCLVASTLSSCTLEAIAGAAGPARWFQLYLQPEREHTLALLRRA EAAGYRAIVLTLDASIQLASRSALQAGFVMPADCTPANLAAYPPPAPPVLGADDSRIF QGAMRHAPTWDDLRWLLGETRLPVWIKGVMHSDDARALQAAGAAGLIVSNHGGRSLDG APASLHRLPAVRAAVGEGYPVLLDGGVRSGADAFKALALGADAVLIGRLQMYALAVAG ALGVAHMLQLLTEELHACMAQAGCAQLCDITPNCLTPQPPC" gene complement(546522..548825) /locus_tag="Dtpsy_0530" /db_xref="GeneID:7382821" CDS complement(546522..548825) /locus_tag="Dtpsy_0530" /note="PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ajs:Ajs_0514 TonB-dependent receptor" /codon_start=1 /inference="protein motif:PFAM:PF00593" /transl_table=11 /product="TonB-dependent receptor" /protein_id="YP_002552010.1" /db_xref="InterPro:IPR000531" /db_xref="InterPro:IPR005829" /db_xref="InterPro:IPR012910" /db_xref="GI:222109746" /db_xref="GeneID:7382821" /translation="MPSSPLKKPKSLRMAAALLPLSAIAQVQPTPAPVTTLPTVTVQE QAIDPNPNAEVGAPYKAKTSADTRHTRPLAETPQTIQVVTGEAIRDSGATDLKQILAA QPGITLGTGENGNAFGDRYIIRGQEARSDVFVDGLRDPGMTTRESFAIEQVEVTKGPN SSFAGRGSAGGAVNAVTKQATLDYDFTRVSAGVGTDSHHRVTLDMNKGFTDKFALRAN ALTSGEDVPGRSPSQRRRDGLALSGLWELNQDLSVTLDYYGLRAKDKHPDLGGYLVGT VPNRRPATGVPVYAQNSDFLNSDVDTVTARIAYRFAPDLKLTSLTRYGQSDNRYATTG ASNGTVLDAANNPIGTAGVLDGGHTGWQDVKYFAHQSNLRWDKQIGSLKHEFIFGFEY TDHKVKSGNYGVTNTGATNCRVSGRNGPQAGWCITDLNGNPVSNLGDLAGRSYERRSW TRDWRVKTFALSAMDTVDLTDQWTVFGGLRADHYDLSLDTRNNQTGAITGNYGFNDTL LNGHLGVSYKINPMGMVYASYGTAQDINGGEPDTGTSSGYGGLVIHNGSAAGAKPETS QNIELGTKWNLLDDKLLATAAVFQTTKDDVMEGANYDTEGTFNTGKNRVRGIELGLAG NLTKNFQLQAGAAIMKSKVLRSAVASNVGNPLSNFADRSFTVQGKYQLTRDFSFGAVA RYESSRCGGQPDTGAGYTNGMCSQPVPSFSVYDLFASYRINKHADLRLNVLNVTDKDY YTAVYRSGAFLYKGDGRAVRLTLNLDL" sig_peptide complement(548748..548825) /locus_tag="Dtpsy_0530" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.850 at residue 26" gene complement(549066..549992) /locus_tag="Dtpsy_0531" /db_xref="GeneID:7382822" CDS complement(549066..549992) /locus_tag="Dtpsy_0531" /note="PFAM: beta-lactamase domain protein; KEGG: ajs:Ajs_0515 beta-lactamase domain-containing protein" /codon_start=1 /inference="protein motif:PFAM:PF00753" /transl_table=11 /product="beta-lactamase domain protein" /protein_id="YP_002552011.1" /db_xref="InterPro:IPR001279" /db_xref="GI:222109747" /db_xref="GeneID:7382822" /translation="MPLVPPALPPEIIVIERGWLSASNVLLLGRDCTALVDSGYCAHA PQTVALVESALDGRVLDQLLNTHLHSDHCGGNAALQARWPQLATRIPPGQWAQVQDWD PVALSYVPTGQECPRFRADGVLPPGTEVQLGDRAWQVHAAPGHDTHAVVLFEPHARVL ISGDALWENGFGVVFPELDGEQAFAEVGATLGLIERLDPLTVIPGHGSVFGDVPAALA RARRRLAGFEADPVKHARHAAKVLLKYKLLEWQQAPLAQVHAWLAATPYFGMLHQRHF AQQTASVWAEQLMQELVDAGAARREGRALLNA" gene complement(550027..551712) /locus_tag="Dtpsy_0532" /db_xref="GeneID:7382823" CDS complement(550027..551712) /locus_tag="Dtpsy_0532" /note="PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_0516 AMP-dependent synthetase and ligase" /codon_start=1 /inference="protein motif:PFAM:PF00501" /transl_table=11 /product="AMP-dependent synthetase and ligase" /protein_id="YP_002552012.1" /db_xref="InterPro:IPR000873" /db_xref="GI:222109748" /db_xref="GeneID:7382823" /translation="MERIWLKNYPAGVPHDVDADAYPSVAQMLEESFHRHADSPFSVC MDRWMSYRELDRLSARLGAWLQGQGLAPGARVAIMLPNVPQFAVTMAAVLRAGYTCVN VNPLYTARELEHQLKDSGATAIVILENFAHTLAEVIDHTAVQHVAIASMGDLLGAWYG RWITFAVRHLAKMVPAYELPLTGGRQVISFKRALALGERRTLTPARVAPDTPAFLQYT GGTTGLSKGAVLTQRNIVAATLQAEAWFTPALGKIGDLSRANSIAALPLYHIFALTLC LLAIRQGSRLTLIPNPRDIPKFVEVLKKRPFHMLPAVNTLFNALLQNPQFRHLDFSQL CVAQAGGMAATEATAQQWKAVTGATMIEGWGMSETCAIGTNNPVNSTAFSGSIGLPLP GIDIAIKDDAGASLPIGSAGEICIKGPNVMPGYYNQPEENAKAFTPDGFMRTGDIGVM DEEGYTRIIDRKKDMILVSGFNVFPNELEQVVALCPGVLECAAVGVADDKQGEAIKVF VVRSDPSLTEDDVVRYCHEHLTGYKRPKYIEFRDELPKTNVGKILRRELRDGK" gene 551853..552764 /locus_tag="Dtpsy_0533" /db_xref="GeneID:7382824" CDS 551853..552764 /locus_tag="Dtpsy_0533" /note="PFAM: PGAP1 family protein; KEGG: ajs:Ajs_0517 PGAP1 family protein" /codon_start=1 /inference="protein motif:PFAM:PF07819" /transl_table=11 /product="PGAP1 family protein" /protein_id="YP_002552013.1" /db_xref="InterPro:IPR012908" /db_xref="GI:222109749" /db_xref="GeneID:7382824" /translation="MTNARWQRWAVAVHLLLIAGWMAWFWGRSPALALAGVAAVPLMF RLGMAPQFFLMAWVCRGDATPRPRAGQLLRAWWAESRWASLVFGWWQPFRHQAVADWL PPRASDVPGPRGVVLVHGFLCNRGFWTPWLALLRARGHAFVAVTLEPAFGSIDDYCRT IDDAVRRVAEATGRAPLIVGHSMGGLAARAWLRAVPGSEQRVHRIVTLGSPHHGTWPA RGARSTNGRQMRLHGPWVRQLGQDEPPARAAVFVCWYSNCDNVVYPPAAAMLQGADNR FIEGVAHVEMAFHPRVLQDCLALLEQP" sig_peptide 551853..551954 /locus_tag="Dtpsy_0533" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.874) with cleavage site probability 0.698 at residue 34" gene complement(552783..553622) /locus_tag="Dtpsy_0534" /db_xref="GeneID:7382825" CDS complement(552783..553622) /locus_tag="Dtpsy_0534" /EC_number="1.14.16.1" /note="KEGG: ajs:Ajs_0518 phenylalanine 4-monooxygenase; TIGRFAM: phenylalanine-4-hydroxylase; PFAM: aromatic amino acid hydroxylase" /codon_start=1 /inference="protein motif:TFAM:TIGR01267" /transl_table=11 /product="phenylalanine-4-hydroxylase" /protein_id="YP_002552014.1" /db_xref="InterPro:IPR001273" /db_xref="InterPro:IPR005960" /db_xref="GI:222109750" /db_xref="GeneID:7382825" /translation="MGQAPVVYGQSSRPPRGDYSRAQEDYTCAQNFAAYTAADHDTYH RLYQRQSAQLQGLASEAFIQALPLLGAKERIPRFDDVNERLYRATRWELVAVPGLIPE VPFFSLLANRKFPVTDWIRTPQEFDYIVEPDVFHDLFGHVPLLFNPVFADYVQRYGEG GLKAAGLGACEMLSRLYWYTIEFGLIREQGGLRAYGAGILSSRGELPYAVHSPEPQRL PLELERTMRTRYKIDTYQQTYFVIDSFEQLFELTAQDFAPIYERLRGQPEFAADAREP LPA" gene complement(553708..554637) /locus_tag="Dtpsy_0535" /db_xref="GeneID:7382826" CDS complement(553708..554637) /locus_tag="Dtpsy_0535" /note="PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_0519 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF03401" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002552015.1" /db_xref="InterPro:IPR005064" /db_xref="GI:222109751" /db_xref="GeneID:7382826" /translation="MHGLRRTGTERIRPMTIVVPYAAGGPLDKSARILAEGAQAQLRP IQVQNKPGAGGNLGADTVAKAPKSGNLLVMGAVATHAVNPWLYKNFPYNPVKDFTPIV LVARTPNVLVMSAERAKALDISTTTDLVKYMKAHPDQLKYGSGGNGSIGHIAGEMFKS LTNTRMPHAPFQGAGPALKALQDGGVDIVFDNLASSLPLIQGGKLKALGVTSLGSDDA LPHVPSINSEVPGFNVSTWFGLFAPATLPAADAQKYATAFSKAMHSPAGKAQFQKMGL TPEELTLGGFGSFVRSELGKYEFLIKAAKIHID" gene complement(554766..555884) /locus_tag="Dtpsy_0536" /db_xref="GeneID:7382827" CDS complement(554766..555884) /locus_tag="Dtpsy_0536" /EC_number="1.13.11.27" /note="KEGG: ajs:Ajs_0520 4-hydroxyphenylpyruvate dioxygenase; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase" /codon_start=1 /inference="protein motif:TFAM:TIGR01263" /transl_table=11 /product="4-hydroxyphenylpyruvate dioxygenase" /protein_id="YP_002552016.1" /db_xref="InterPro:IPR004360" /db_xref="InterPro:IPR005956" /db_xref="GI:222109752" /db_xref="GeneID:7382827" /translation="MTAALPLRATHDADAWENPMGLMGFEFVEFTSPTPGLLEAVFEK LGFTLVARHRSKDVLLYRQNQINFILNREPASQAAYFGAEHGPSACGLAFRVKDSHQA YRRALELGAQPIEIPTGPMELRLPAIKCIGGAPLYLIDRFEDGKSIYDIDFDFLPGVD RRPVGHGLNEIDHLTHNVYRGRMGFWANFYEKLFNFREIRYFDIQGEYTGLTSKAMTA PDGKIRIPLNEEAKQGGGQIEEFLMQFNGEGIQHIALICDSLVEVVDKLGLASVPLAP APNDIYYDMLDTRLPGHGQNVAELQARGILLDGTTADGTPRLLLQIFSTPMLGPVFFE FIERQGNYREGFGEGNFKALFESLERDQIRRGVLQTQA" gene 556070..556555 /locus_tag="Dtpsy_0537" /db_xref="GeneID:7382828" CDS 556070..556555 /locus_tag="Dtpsy_0537" /note="PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: ajs:Ajs_0521 AsnC family transcriptional regulator" /codon_start=1 /inference="protein motif:PFAM:PF01037" /transl_table=11 /product="transcriptional regulator, AsnC family" /protein_id="YP_002552017.1" /db_xref="InterPro:IPR000485" /db_xref="GI:222109753" /db_xref="GeneID:7382828" /translation="MSERTPALDKLDRAILRRLQDNGRETYDVIGEQVGLSPSAVLRR AKRLEEEGVIDRYVALVRPERVGLGLTAYLNVRLEKHTESHKRNPMDLFRASVQTWPE VVECASLTGEMDYLLRVVVADMAHYSRFIMDTLLKHPSVQDCKTSFVLDRVKATTALP V" gene 556832..557464 /locus_tag="Dtpsy_0538" /db_xref="GeneID:7382829" CDS 556832..557464 /locus_tag="Dtpsy_0538" /note="PFAM: GCN5-related N-acetyltransferase; KEGG: ajs:Ajs_0522 GCN5-related N-acetyltransferase" /codon_start=1 /inference="protein motif:PFAM:PF00583" /transl_table=11 /product="GCN5-related N-acetyltransferase" /protein_id="YP_002552018.1" /db_xref="InterPro:IPR000182" /db_xref="GI:222109754" /db_xref="GeneID:7382829" /translation="MNTVMVPIRSLGPQHRERIAAHLLRLEPRDRYLRFGYAANDDQV RRYAELLDFSRDEVFGIFNRRLELIAMAHVAFAPSGEYESCAEFGVSVSATARGRGYG ARLFERAVMLARNRGVSMMFIHALTENTAMLKIARNAGATVRRDGSESEAYLQLPPAR FDTRVSEIMAEHFGEVDYQLKKQARQFWRFLADLQEIRQGVRDGRHQAAE" gene 557547..558425 /locus_tag="Dtpsy_0539" /db_xref="GeneID:7382830" CDS 557547..558425 /locus_tag="Dtpsy_0539" /note="PFAM: CBS domain containing protein; transporter-associated region; KEGG: ajs:Ajs_0523 CBS domain-containing protein" /codon_start=1 /inference="protein motif:PFAM:PF00571" /transl_table=11 /product="CBS domain containing protein" /protein_id="YP_002552019.1" /db_xref="InterPro:IPR000644" /db_xref="InterPro:IPR005170" /db_xref="GI:222109755" /db_xref="GeneID:7382830" /translation="MSDPHPARASDKEDKRTFLQRLVEFINPGPDSTAELIATLAEAE DNDVINADARVMLERVLRMAEMTAGDVLVPAPRMDMLDIDAPVDELMHQVLHTAHSRF PVYQGERDNIIGILLAKDLLKLWRSPGLNVRTLVRPALFVPESKGLHDLGREFRNTRN HMAIAIDEFGRIAGLVTFEDVIEQIVGEIEDEFDIPEDEGDIFGLADRTFRVSGDTPV ERVAEAFGVALQGSDPDESFDTIGGLIAHELGRMPRKGESVVLGGLQFVVMHTKGGSV RWFKVAPAAGTPESER" gene 558425..560023 /locus_tag="Dtpsy_0540" /db_xref="GeneID:7382831" CDS 558425..560023 /locus_tag="Dtpsy_0540" /note="TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: ajs:Ajs_0524 apolipoprotein N-acyltransferase" /codon_start=1 /inference="protein motif:TFAM:TIGR00546" /transl_table=11 /product="apolipoprotein N-acyltransferase" /protein_id="YP_002552020.1" /db_xref="InterPro:IPR003010" /db_xref="InterPro:IPR004563" /db_xref="GI:222109756" /db_xref="GeneID:7382831" /translation="MAVAPPLAAHAPRRGPLPWVLALVAGLAQAASLAWPWGGQPLWW LQILSLGLWAHVLLGAGGTRRAGLLGWVFATAWLAGTFWWLFISMHTYGGLAAPLAVL AVLGLAAFLGSYYAAVSACFWALAPVHRALAAIVFAALWLLAELARGQWWTGFPWGAG GYAHVQGPLAALARSVGVYGIGAAAALLAMLLAQARRADLRNARAWALVLALTAVGAG AAWQRHCAVEGCGAPPPVHAPLSLALLQGNIPQDEKFQPGSGVPMALQWYYDQIHAAK ASLVVAPETAIPLLPQQLVPGYLEGMAERYAAGGQALLLGIPLGSLEEGYTNSVLGFA PEQSQPYRYDKHHLVPFGEFIPPFFRWFTEMMNIPLGDFNRGAVGQPSLAWAGERIAP NICYEDLFGEEIGVRFLDPASSPTILVNLSNIGWFGNTVAVDQHLAISRLRALEFERP MVRATNTGATAVIDHRGQVTHRMPAYQRGVLRAQVQGRGGAATPYARWVARWGLWPLW ALGFAVAGLAWCLRGRTGRARAGN" sig_peptide 558425..558517 /locus_tag="Dtpsy_0540" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.708) with cleavage site probability 0.661 at residue 31" gene 560207..560731 /locus_tag="Dtpsy_0541" /db_xref="GeneID:7382832" CDS 560207..560731 /locus_tag="Dtpsy_0541" /EC_number="4.2.1.60" /note="KEGG: ajs:Ajs_0525 3-hydroxydecanoyl-(acyl carrier protein) dehydratase; TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ" /codon_start=1 /inference="protein motif:TFAM:TIGR01749" /transl_table=11 /product="beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA" /protein_id="YP_002552021.1" /db_xref="InterPro:IPR010083" /db_xref="InterPro:IPR013114" /db_xref="GI:222109757" /db_xref="GeneID:7382832" /translation="MADSFSYEQLIASGEGRLFGPDSGRLPLPPMLMFDRITHIDTDG GAHGLGKIVAELDVKPDLWFFACHFQGDPVMPGCLGLDAMWQLIGFYLTWLRLPGRGR ALGAGEVKFTGEVGPDVKLVTYEIDIKRVIKRKLNMAIGDARLLADGKEIYVANDLRV GLFLREGDAQGSAA" gene 560728..561951 /locus_tag="Dtpsy_0542" /db_xref="GeneID:7382833" CDS 560728..561951 /locus_tag="Dtpsy_0542" /note="PFAM: Beta-ketoacyl synthase; KEGG: ajs:Ajs_0526 beta-ketoacyl synthase" /codon_start=1 /inference="protein motif:PFAM:PF00109" /transl_table=11 /product="Beta-ketoacyl synthase" /protein_id="YP_002552022.1" /db_xref="InterPro:IPR014030" /db_xref="InterPro:IPR014031" /db_xref="GI:222109758" /db_xref="GeneID:7382833" /translation="MTKKRVVITGAGIVSCIGNDLQTVEEALRASRSGIKAVPQFTEL GLRSQVAGVPEIDVEARIDRKQLRFMGDAAAYAQIALEDAIQQAGLTPEQVSHPRTGL IMGSGGGSPANQIEAADTLREKGIRRVGPYQVTRCMSSTVSACLATNFKVKGINYSIT SACSTSAHCIGAAAQQIAWGLQDVMFAGGGEELSWGMSLLFDGMGAMSSKYNATPEKA SRAYDANRDGFVIAGGGGAVVLESLEHALARGATILGEVVGFGATSDGEDMVAPSGDG AIACMQQAMEGLGAPIDYINTHGTSTPVGDMQEVRAMQAVFGEAVPPFSSTKSLTGHS LGATGVQEAIYCLIMLNKGFIAGSANVETPDPLLGSMPLVTQTRDAQLTHVLSNSFGF GGTNASLVLRRWQGQ" gene 562058..563011 /locus_tag="Dtpsy_0543" /db_xref="GeneID:7382834" CDS 562058..563011 /locus_tag="Dtpsy_0543" /EC_number="6.1.1.14" /note="KEGG: ajs:Ajs_0527 glycyl-tRNA synthetase subunit alpha; TIGRFAM: glycyl-tRNA synthetase, alpha subunit; PFAM: glycyl-tRNA synthetase alpha subunit" /codon_start=1 /inference="protein motif:TFAM:TIGR00388" /transl_table=11 /product="glycyl-tRNA synthetase, alpha subunit" /protein_id="YP_002552023.1" /db_xref="InterPro:IPR002310" /db_xref="InterPro:IPR006194" /db_xref="GI:222109759" /db_xref="GeneID:7382834" /translation="MLTFQQIILKLQSYWADQGCALLQPYDMEVGAGTSHTATFLRAL GPEPWKAAYVQPSRRPKDGRYGENPNRLQHYYQYQVVLKPAPDNILELYLGSLEALGF DLKKNDIRFVEDDWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGIDCKPATGEITY GLERLAMYLQGVDNVYNLTWTEGPNGAKLTYGDVYHQNEVEQSTYNFEHSDAEFLFTA FGAHEKQANHLMGEQLALPAYEQVLKAAHTFNLLDARGAISVTERAAYIGRIRNLARA VAKAYLDSRARLGFPMAPKAHADEVLAELAKAAEQQNKKAA" gene 563042..565204 /locus_tag="Dtpsy_0544" /db_xref="GeneID:7382835" CDS 563042..565204 /locus_tag="Dtpsy_0544" /EC_number="6.1.1.14" /note="KEGG: ajs:Ajs_0528 glycine--tRNA ligase; TIGRFAM: glycyl-tRNA synthetase, beta subunit" /codon_start=1 /inference="protein motif:TFAM:TIGR00211" /transl_table=11 /product="glycyl-tRNA synthetase, beta subunit" /protein_id="YP_002552024.1" /db_xref="InterPro:IPR002311" /db_xref="InterPro:IPR006194" /db_xref="InterPro:IPR008909" /db_xref="InterPro:IPR015944" /db_xref="GI:222109760" /db_xref="GeneID:7382835" /translation="MNHQNLLVELFVEELPPKALQKLGDAFAGVLLEQLQAQGLTSAH SQLTAFASPRRLAAHITEVLPAAADKAVSQKLMPVAVGLDASGQPTPALLKKLAALGA DAASVPQLKRVHDGKAEVLFFESMAKGALLADGLQKALDEAIAKLPIPKVMRYQLQDG WTSVHFVRPAHGLVALHGSEVLVGVQALGLTAGNTTHGHRFEASVDPVVIQSADSYAE QLRSEGAVIASFAERRAEIARQLQAAADRVGGGVRPIDDDALLDEVTALVERPNVLVC EFEKDFLAVPQECLILTMKANQKYFPLLDAEGKLTHQFLVVSNISPQDASAVIQGNER VVRPRLADAKFFFDQDRKKTLVSRVDQLAKVVYHNKLGTQGERVERVRHIAKAIATQL FTALAQGNAALDSQEGEIAQDYLLTCVDNAALLAKTDLVTDMVGEFPELQGIMGGYYA VSDGLPDEVAHAIEDHYKPRFAGDALPRENVGVVVALADKLETLVGMFGIGNLPTGDR DPFALRRHALGVIRMLVEKELPLDLDALLASAVPAFGDKIEDTSAQLADFIYDRLAGS LREQGYSAQEVDAVIALRPQRLALVPRQIEAVRAFATLEQAPALAAANKRVTNILKKA GEVDPHVNEELLQEPAEKDLYAALQRFVPEANAQFDSGDYTASLQTLAVLRAPVDAFF DDVMVNAEELALRLNRQGLLKKLHMAMNRVADLSRLAV" gene 565289..565864 /locus_tag="Dtpsy_0545" /db_xref="GeneID:7382836" CDS 565289..565864 /locus_tag="Dtpsy_0545" /note="TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: ajs:Ajs_0529 D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase" /codon_start=1 /inference="protein motif:TFAM:TIGR01656" /transl_table=11 /product="histidinol-phosphate phosphatase family protein" /protein_id="YP_002552025.1" /db_xref="InterPro:IPR006543" /db_xref="InterPro:IPR006549" /db_xref="GI:222109761" /db_xref="GeneID:7382836" /translation="MKLAILDRDGTLNALGDGFIASPDEWVPVPGALEAVARLNHAGW HVVVATNQPGLGRGLFDAQTLVAIHAKMHRQLATLGGRIDAVFYCPHTESEQCHCRKP APGLMEQIRDRYGAEGQEILVAGSSAAHLQAASELGAQLHMVCTGRSAHLDPRQSLPP GWPAGTRAHASLGALADFIAPQNGASLPVAL" gene 565942..566691 /locus_tag="Dtpsy_0546" /db_xref="GeneID:7382837" CDS 565942..566691 /locus_tag="Dtpsy_0546" /note="PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: ajs:Ajs_0530 phospholipid/glycerol acyltransferase" /codon_start=1 /inference="protein motif:PFAM:PF01553" /transl_table=11 /product="phospholipid/glycerol acyltransferase" /protein_id="YP_002552026.1" /db_xref="InterPro:IPR002123" /db_xref="GI:222109762" /db_xref="GeneID:7382837" /translation="MALIRSILHLLVMVVTVVPYTLGILLVRVLGGSPAARYRVARAW LKLCIDSARWLLGIRTQITGMEHLPQGEQQGAVLLVKHQSTYETFLMPAIMPHPLAYV FKKELLSVPFFGWSIGSLDMIHIDRGQRARAFAKVLQQGRRLLAKGTWVIMFPEGTRT ERGAKGDYKSGGTRLAIDAGVPVVPIAVTSATVWPRKAFIKRPGVVHVSVGRPIPTEG RKPDELMREVEAWIEGEMRRLDPDAYPPTAG" gene 566693..567613 /locus_tag="Dtpsy_0547" /db_xref="GeneID:7382838" CDS 566693..567613 /locus_tag="Dtpsy_0547" /note="PFAM: protein of unknown function DUF45; KEGG: ajs:Ajs_0531 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF01863" /transl_table=11 /product="protein of unknown function DUF45" /protein_id="YP_002552027.1" /db_xref="InterPro:IPR002725" /db_xref="GI:222109763" /db_xref="GeneID:7382838" /translation="MQRLVQLALDFLGGGSSPDSGVPQPKRAMAPVQQAPEAPLLVAP APPLGDLLTPAVFRHPAASREVLLGDAVVAYALQRARRRSIGFTVGPEGLSVRAPSWV TLAGVDAALRDKAPWILRKLGEQQARRQQEERARIVWGDGAVLPYLGEPLTVVLDPTH GFAARGGALEEQGGATGRALRIALARSAAPAQVRDAVQAWLMRDARRCFTERLHHFAP LLDVRWTRLRLSSANTRWGSARADGSIRLNWRLMHYRPAIIDYVVAHELSHLRVMDHS PRFWDTVATVVPDYAALRRSLREQPAPPWD" gene 567643..568092 /locus_tag="Dtpsy_0548" /db_xref="GeneID:7382839" CDS 567643..568092 /locus_tag="Dtpsy_0548" /note="SMART: Rhodanese domain protein; KEGG: ajs:Ajs_0532 rhodanese domain-containing protein" /codon_start=1 /inference="protein motif:SMART:SM00450" /transl_table=11 /product="Rhodanese domain protein" /protein_id="YP_002552028.1" /db_xref="InterPro:IPR001763" /db_xref="GI:222109764" /db_xref="GeneID:7382839" /translation="MAAMNTPTPDLHASEQPLPAEGYAGDVSPPLAWQWVRAGQAVLV DVRTDAERDWVGFVPGAVAAAWKQWPGMQPNADFDAQLRAAVPPGGTAVLLCRSGVRS VAAARRATELGIKAYNILEGFEGEPDENGQRNRRSGWRFRGLPWRQG" gene complement(568189..568677) /locus_tag="Dtpsy_0549" /db_xref="GeneID:7382840" CDS complement(568189..568677) /locus_tag="Dtpsy_0549" /note="PFAM: Peptidoglycan-binding LysM; transport-associated; SMART: Peptidoglycan-binding LysM; KEGG: ajs:Ajs_0533 peptidoglycan-binding LysM" /codon_start=1 /inference="protein motif:PFAM:PF01476" /transl_table=11 /product="Peptidoglycan-binding LysM" /protein_id="YP_002552029.1" /db_xref="InterPro:IPR002482" /db_xref="InterPro:IPR007055" /db_xref="GI:222109765" /db_xref="GeneID:7382840" /translation="MGLFSFIKEAGEKLFGGKDAQASTATAPTQAELNDKAGKAIEAY IASQNLGVSDVQVHFEGPEGKVTVKGTAPTQAAKEKVTLCCGNVASVTSVDNQMSVTN PEPEAQYHDVVRGDTLSAIAKKFYGDANKYPVIFEANKPMLTHPDKIYPGQKLRIPPL AK" gene 568834..569610 /locus_tag="Dtpsy_0550" /db_xref="GeneID:7382841" CDS 568834..569610 /locus_tag="Dtpsy_0550" /note="TIGRFAM: transcriptional activator, Baf family; PFAM: Bvg accessory factor; KEGG: ajs:Ajs_0534 pantothenate kinase" /codon_start=1 /inference="protein motif:TFAM:TIGR00671" /transl_table=11 /product="putative transcriptional acitvator, Baf family" /protein_id="YP_002552030.1" /db_xref="InterPro:IPR004619" /db_xref="GI:222109766" /db_xref="GeneID:7382841" /translation="MTFLAIDVGNTRLKWALFDAAQPGAGLLAHGAEFLDHIERLAEG PWSHLPAPRHMLGCVVAGDAVKRRVAEQMELWDVPARWVVPSAQEAGVINGYDHPTRL GADRWVAMIGARHRLLAQGPARPLIVVMVGTAVTVEALDAEGRFLGGLILPGHGIMLR ALESGTAGLHVPTGEVRLFPSNTSDALTSGGTYAIAGAVERMYQHLRQHCGQEPACMM TGGAGWKMAPSMTRPFELVENLIFDGLLEIAARRFAELPA" gene complement(569632..570294) /locus_tag="Dtpsy_0551" /db_xref="GeneID:7382842" CDS complement(569632..570294) /locus_tag="Dtpsy_0551" /note="PFAM: regulatory protein TetR; KEGG: ajs:Ajs_0535 TetR family transcriptional regulator" /codon_start=1 /inference="protein motif:PFAM:PF00440" /transl_table=11 /product="transcriptional regulator, TetR family" /protein_id="YP_002552031.1" /db_xref="InterPro:IPR001647" /db_xref="GI:222109767" /db_xref="GeneID:7382842" /translation="MAKKAPRRTAERILESSLALFNRFGEPNVSTTAIAADLHISAGN LYYHYPAKDEIVNALFARYDEALSGLLHAGADVQDVEDAWFFMHTLFELIWQYRFFYR DLNNLLSCNRRLEEQFPVLLQAKTAAMHDLLQALRRRGALQMEPADAMQPTATSMVVV LTYWLSFEYVRAPRQALEPESAQAALLHGARHVLGLLMPYLEPTQRAHLARLVGAYDQ AA" gene complement(570387..570860) /locus_tag="Dtpsy_0552" /db_xref="GeneID:7382843" CDS complement(570387..570860) /locus_tag="Dtpsy_0552" /note="TIGRFAM: poly(hydroxyalkanoate) granule-associated protein; PFAM: poly granule associated family protein; KEGG: ajs:Ajs_0536 poly(hydroxyalkanoate) granule-associated protein" /codon_start=1 /inference="protein motif:TFAM:TIGR01837" /transl_table=11 /product="poly(hydroxyalkanoate) granule-associated protein" /protein_id="YP_002552032.1" /db_xref="InterPro:IPR008769" /db_xref="GI:222109768" /db_xref="GeneID:7382843" /translation="MPRVPPDDDTDPAREFPRMARESAQQIWLAGLGAFAKAQAEGGK VFEALVREGMALQRKTQDTAQEHWGEAAQRMGQMASGLGERAAGQWDRLEGIFEERVS KALQRLGVPTAQEVQALHERIDALTQELQALQERQADRDGMTTAPPPSRPSTHEG" gene 571044..572111 /locus_tag="Dtpsy_0553" /db_xref="GeneID:7382844" CDS 571044..572111 /locus_tag="Dtpsy_0553" /note="TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: ajs:Ajs_0537 dTDP-glucose 4,6-dehydratase" /codon_start=1 /inference="protein motif:TFAM:TIGR01181" /transl_table=11 /product="dTDP-glucose 4,6-dehydratase" /protein_id="YP_002552033.1" /db_xref="InterPro:IPR001509" /db_xref="InterPro:IPR002198" /db_xref="InterPro:IPR002225" /db_xref="InterPro:IPR003869" /db_xref="InterPro:IPR005888" /db_xref="InterPro:IPR005913" /db_xref="InterPro:IPR013120" /db_xref="GI:222109769" /db_xref="GeneID:7382844" /translation="MILVTGGAGFIGANFVLDWLAVGDEPVVNLDKLTYAGNLHNLDS LQGDASHVFVQGDIGDRTLLDRLLAEHQPRAVINFAAESHVDRSIHGPEDFIQTNVVG TFRLLEAVRHYWQALPATQKEAFRFLHVSTDEVYGSLAPAAAAFTEEHNYEPNSPYSA SKAASDHLVRAWHHTYGLPVLTTNCSNNYGPLHFPEKLIPLMIVNALAGKSLPVYGDG MQIRDWLYVKDHCSAIRRVLQAGRLGETYNVGGWNEKPNIDIVNTVCALLDELRPRSD GQSYTTQITYVTDRPGHDRRYAIDARKLERELGWKPAETFETGIRKTVQWYLDHPEWV AQVQSGAYREWVQKQYEGAAA" gene 572108..572998 /locus_tag="Dtpsy_0554" /db_xref="GeneID:7382845" CDS 572108..572998 /locus_tag="Dtpsy_0554" /EC_number="1.1.1.133" /note="KEGG: ajs:Ajs_0538 dTDP-4-dehydrorhamnose reductase; TIGRFAM: dTDP-4-dehydrorhamnose reductase; PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility domain" /codon_start=1 /inference="protein motif:TFAM:TIGR01214" /transl_table=11 /product="dTDP-4-dehydrorhamnose reductase" /protein_id="YP_002552034.1" /db_xref="InterPro:IPR001509" /db_xref="InterPro:IPR005913" /db_xref="InterPro:IPR013120" /db_xref="GI:222109770" /db_xref="GeneID:7382845" /translation="MNILLLGKSGQVGWELQRSLAVLGRVTALDHDSTEHCGDFANPE GVRETVRALRPDVIVNAAAHTAVDKAESEPEIARLLNATTPGVLAEEAARLGTWLVHY STDYVFDGSGTRPWVETDAPAPLSVYGATKLEGEQRIQQTGCRHLILRTSWVYAARGG NFAKTMLRLGSERERLTVIDDQWGAPTGADLLADVTAHAVRHLQSRPGDGGLYHCVAS GETNWHSYAKYVLEHARQAQPAIELKATEVAPVPTSAFPTPARRPHNSRLDTTRLQTT FGLVLPPWQQGVARMLTEIL" gene 573019..573909 /locus_tag="Dtpsy_0555" /db_xref="GeneID:7382846" CDS 573019..573909 /locus_tag="Dtpsy_0555" /note="TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: ajs:Ajs_0539 glucose-1-phosphate thymidylyltransferase" /codon_start=1 /inference="protein motif:TFAM:TIGR01207" /transl_table=11 /product="glucose-1-phosphate thymidylyltransferase" /protein_id="YP_002552035.1" /db_xref="InterPro:IPR005835" /db_xref="InterPro:IPR005907" /db_xref="GI:222109771" /db_xref="GeneID:7382846" /translation="MTTPTRKGIILAGGSGTRLHPATLAISKQLLPVYDKPMIYYPLS TLMLAGIREILIISTPQDTPRFEQLLGDGSQWGLQLQYAVQPSPDGLAQAFLIGEDFL AGSPSALVLGDNIFYGHDFHELLANAMARPQGASVFAYHVHDPERYGVAEFDASGKVL SLEEKPQKPKSSYAVTGLYFYDSQVVELAKGLQPSPRGELEITDLNRLYLEQGQLSVE IMGRGYAWLDTGTHDSLLDASQFIATLEQRQGLKIACPEEIAWRSGWIDAARLERLAQ PLAKNGYGQYLQRLLKETVY" gene 573909..574454 /locus_tag="Dtpsy_0556" /db_xref="GeneID:7382847" CDS 573909..574454 /locus_tag="Dtpsy_0556" /EC_number="5.1.3.13" /note="KEGG: ajs:Ajs_0540 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related" /codon_start=1 /inference="protein motif:TFAM:TIGR01221" /transl_table=11 /product="dTDP-4-dehydrorhamnose 3,5-epimerase" /protein_id="YP_002552036.1" /db_xref="InterPro:IPR000888" /db_xref="GI:222109772" /db_xref="GeneID:7382847" /translation="MKATRLAIPEVVLIEPQVFGDARGFFFESFNQKTFNEATGTNHQ FVQDNHSRSSQGVLRGLHYQIQQPQGKLVRVARGKVWDVAVDIRKSSPTFGQWVGAEL SEDNQHQLWVPPGFAHGFVVLSESADFLYKTTDYYAPEHERCIAWNDEALTISWPVSI TPILSAKDQLGAALCDAEVFK" gene 574468..575601 /locus_tag="Dtpsy_0557" /db_xref="GeneID:7382848" CDS 574468..575601 /locus_tag="Dtpsy_0557" /note="PFAM: glycosyl transferase group 1; KEGG: pol:Bpro_4016 glycosyl transferase, group 1" /codon_start=1 /inference="protein motif:PFAM:PF00534" /transl_table=11 /product="glycosyl transferase group 1" /protein_id="YP_002552037.1" /db_xref="InterPro:IPR001296" /db_xref="GI:222109773" /db_xref="GeneID:7382848" /translation="MRVLQFGRFWNVEHGGLERHVTLLGQGLAGQGVEVVNLVAASGL VSSDETRGLYRLVRAPSFGMAYGTALSPALPLKALALHREQPFDLFHLHLPDPLSHLA SILLPSNVPRVISWHSDIVRQKRLLKLYKPSLSRLVCQADALVAATQAHFDSSTQIPD CVPLARRHVIPYGLDYAPLQLNARTMALRDELRSRAGGRGLVFAMGRHVYYKGFDVLI RALELTDAFLVLGGNGPLRTSLEQQVAAMGLSDRVYFSGRIPEEDLSAYFHACDVFCL PSVEPSEAFGLVQLEAMACGKPVVCTQLGNGVNVVNVHGQTGFAVPVGDPVALGHCLA RLLRDKTLCQILGAQGLHRTELYSVSAMTASHIKLYEELLSTR" gene complement(575574..576719) /locus_tag="Dtpsy_0558" /db_xref="GeneID:7382849" CDS complement(575574..576719) /locus_tag="Dtpsy_0558" /note="PFAM: glycosyl transferase group 1; KEGG: pol:Bpro_4015 glycosyl transferase, group 1" /codon_start=1 /inference="protein motif:PFAM:PF00534" /transl_table=11 /product="glycosyl transferase group 1" /protein_id="YP_002552038.1" /db_xref="InterPro:IPR001296" /db_xref="GI:222109774" /db_xref="GeneID:7382849" /translation="MIRVAFNATSLLSPLTGIGQYSRQLALGLAYHEGIDADFFYGAA WSKKVRGAPLPGPAGLVPWLRSHVPYSYALRRLVQNNRFAQYASTRAFDLYHEPNILP LPFDGPTVITVHDLSWIRYPEAHPPERVRAMHKYFQPGLERASLVLTDSEFVKRELMD VFGVKPARICPVLLGVEAAFHPRSAGETQAVLDTHRLVHGQYLLAVGTLEPRKNLAVA LQAFMQLPSPLRQRFPLVLVGMKGWHTSALEQQLVHLLAAGEVRQLGYLPRADLAAII AGATTLIYPSVYEGFGLPPLEAMACGVPVITSNVSSIPEVVGDGGFMLAPQDVDGFAT AMETLLSAPDVRDRMAHRALARSAHFTWDRCISQTVEAYYRVLSSSS" gene complement(576716..577543) /locus_tag="Dtpsy_0559" /db_xref="GeneID:7382850" CDS complement(576716..577543) /locus_tag="Dtpsy_0559" /note="PFAM: Aldose 1-epimerase; KEGG: pol:Bpro_4014 aldose 1-epimerase" /codon_start=1 /inference="protein motif:PFAM:PF01263" /transl_table=11 /product="Aldose 1-epimerase" /protein_id="YP_002552039.1" /db_xref="InterPro:IPR008183" /db_xref="GI:222109775" /db_xref="GeneID:7382850" /translation="MTSHSPTSPRLTPSRAGAQILQAHLGTGGDIFYLSPRSPVGSVP IRGGVPVLFPQFADRGPLPKHGLARTALWALVQESKSDEAHSAVFELALAPRPLGVWP HAAHLILQAEASLHGLRLCLQITNTGSSAFSWTGGLHPYFAVDDVQTCSLTGLAGLRV QDRYDPCLSTEPGGAPNWNGQPVERLYGACPPLTLFTGSRALAITANGFEQWMVWNPG HDGGDALPDLPTGDWRRFVCIEPVCVSHPVSLLPGQVFTGTLDIRVLPYAPTSGESA" gene complement(577556..578422) /locus_tag="Dtpsy_0560" /db_xref="GeneID:7382851" CDS complement(577556..578422) /locus_tag="Dtpsy_0560" /note="PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: pol:Bpro_4013 NAD-dependent epimerase/dehydratase" /codon_start=1 /inference="protein motif:PFAM:PF01370" /transl_table=11 /product="NAD-dependent epimerase/dehydratase" /protein_id="YP_002552040.1" /db_xref="InterPro:IPR001509" /db_xref="InterPro:IPR002198" /db_xref="InterPro:IPR005913" /db_xref="InterPro:IPR013120" /db_xref="GI:222109776" /db_xref="GeneID:7382851" /translation="MRILLTGANGFTGRPFAEAARAAGRVVVPLKANLADRDALRHEV LETRPDAVVHLAAISFVGHADDGAFYAVNTVGTCNLLVALAALPNRPQKVLLASSANV YGNCDASPIDETQPPAPVNHYAMSKLAMEHMARTYANRLPLVITRPFNYTGPGQNVNF VIPKLVDHFARKAASIALGNLHVEREFNDVQMVCNAYLQLLEHGEPGEAYNVCSGQPY TLQHVIDTLSRITGHAMHVEVNPAFVRANEVHRLCGSPAKLQALLVKQGYASTNPPLE DTLQRMLSAAGA" gene complement(578419..579459) /locus_tag="Dtpsy_0561" /db_xref="GeneID:7382852" CDS complement(578419..579459) /locus_tag="Dtpsy_0561" /note="TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: pol:Bpro_4012 GDP-mannose 4,6-dehydratase" /codon_start=1 /inference="protein motif:TFAM:TIGR01472" /transl_table=11 /product="GDP-mannose 4,6-dehydratase" /protein_id="YP_002552041.1" /db_xref="InterPro:IPR001509" /db_xref="InterPro:IPR002198" /db_xref="InterPro:IPR006368" /db_xref="GI:222109777" /db_xref="GeneID:7382852" /translation="MNNKQAIITGITGQDGAYLTQLLLDKGYTVYGTYRRTSSVNFWR IEELGIQNHSKLHLIEYDLTDLGASIALVQKVQPDEIYNLAAQSFVGVSFDQPSTTAQ ITGIGALNLLEAIRLVNRKIRFYQASTSEMFGKVQAIPQVEDTPFYPRSPYGVAKLYA HWMTVNYRESYDIFGSSGILFNHESPLRGREFVTRKITDSVAKIKLGKLDVLELGNLD AKRDWGFAKEYVEGMWRMLQADEPDTFVLATNRTETVRDFVRMAFKGAGITVDFKGSA ESETAVDTTSGKTVVRVNPKFYRPAEVDLLIGNPAKAKAKLGWEPKTTLEQLCQMMVE ADLRRNQAGFSF" gene complement(579679..581529) /locus_tag="Dtpsy_0562" /db_xref="GeneID:7382853" CDS complement(579679..581529) /locus_tag="Dtpsy_0562" /note="PFAM: glycosyl transferase family 2; glycosyl transferase group 1; KEGG: cau:Caur_1741 glycosyl transferase family protein" /codon_start=1 /inference="protein motif:PFAM:PF00535" /transl_table=11 /product="glycosyl transferase family 2" /protein_id="YP_002552042.1" /db_xref="InterPro:IPR001173" /db_xref="InterPro:IPR001296" /db_xref="GI:222109778" /db_xref="GeneID:7382853" /translation="MPSKARTPIAIIILTWNGLALTRCCIETLHLDNLPDHVSVIVVD NGSTDGSVEYLRSLPRLTLIENGQNLGYARAVNIGIRAAAPNADIVLLNNDVELIEPD WLDRLSEVAASDPAIGVIGVKILRENGTLQHCGAYLPLDTMWGQQLGGGEVDIGQYAG VRDAESVVFACALIKRAVIEKVGLLSEDFFAYFEDTDYCLRTELEGFRVVVCGDIRVR HAENSSTKINGVSHSAIFLKSQDTFKRKWGEYLGHTRYTSEMDWHSIVNFPSGYAGSS RSFILALDQLGVSVAYKYVYGPGTVFPTSEPEHSDSYVVNMIRSREFGRADVQVVYAQ GDVFARNTGKYRIGFTMLEVDGLPPEWVRQANMMDEVWVPSTFNERTFRDSGVKVPIR VVPLGVDTAYFSPQIRSVKQPDVYTFLSVFEWGERKAPEVLLQAFSDEFSADEPVRLV CKANNFDPSFRIFDKVAELALRSNGGRIVMAENQILQQYELAVLYRSADCFVLPTRGE GWGMPILEAMACGLPVIATNWSSQTDFMTEQNSLPLEVERLVPAEAKCPYYEGFRWAQ PSYEHLRKLMRWTFEHQDEARAIGLRAAADAAQRWTWNASARHMINLISA" gene complement(581519..582709) /locus_tag="Dtpsy_0563" /db_xref="GeneID:7382854" CDS complement(581519..582709) /locus_tag="Dtpsy_0563" /note="PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bac:BamMC406_0768 methyltransferase type 11" /codon_start=1 /inference="protein motif:PFAM:PF08241" /transl_table=11 /product="Methyltransferase type 11" /protein_id="YP_002552043.1" /db_xref="InterPro:IPR013216" /db_xref="InterPro:IPR013217" /db_xref="GI:222109779" /db_xref="GeneID:7382854" /translation="MTSDFYRTFEDKHRGTRDLITSRLRIYLPFVEPLLAYYPKGNAI DLGCGRGEWLELALAAGFDAIGIDLDVGMLAQCHARQLPVRQADALEVLRTLPADSHA LISAFHVAEHLSFVQLELLVNESLRVLQPGGLLILESPNSENLMVGTSSFYLDPTHNR PVHPQLLSFLMEYAGFARSQVLRLNEDPGLLSKRAIRLYDVLAGASPDFAVIAQKSAP TEILATFDREFNAQHGLPIHRLANHYDELLDRRLERLDSRAQIQLKALSAEIDGLRGH VVYLESLLNQSHGTTRTQRVLTHVRSLAGRILRRSMPMLRTAVVRVPWAKHAALAVLR SSPRLANFIGRFLPPGQAPVPSTLSAPQHFEDLRSVRIMRAVSALPSSAQSVTFLEIG DHAK" gene complement(582833..584053) /locus_tag="Dtpsy_0564" /db_xref="GeneID:7385081" CDS complement(582833..584053) /locus_tag="Dtpsy_0564" /note="PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bac:BamMC406_0767 ABC transporter related" /codon_start=1 /inference="protein motif:PFAM:PF00005" /transl_table=11 /product="ABC transporter related" /protein_id="YP_002552044.1" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR017871" /db_xref="GI:222109780" /db_xref="GeneID:7385081" /translation="MGTISVSNLGKAYKQYPHRWSRLAEWILPGSKPRHTLKWVLQDI SFTVNPGEAVGIIGMNGAGKSTLLKMITGTTQPTTGSVRMTGRVAALLELGMGFHPDF TGRQNVFMAGQLLGYSVAEIELLMPEIEAFAEIGDYIDQPVRVYSSGMQVRLAFSVAT ARRPDVLIVDEALSVGDVYFQHKSFERIRQFRTEGTTLLIVSHDKQAIQSICDRAILL NGGRLAMEGEPEAVMDYYNALLADHQNQVVKQETREDGKLRTISGTGEATISDAWIAD VNGQRVEVVGVGQRVTLGVTAHCRSELPELVIGYMIKDRLGQPVFGTNTHHLNHKLHR LAAGTNIQFEFSFDVNIGPGTYSVALALHAEQTHLGKNYEWRDLAVMFNVVNINKSEF VGLAWIPPDVRCSA" gene complement(584053..584844) /locus_tag="Dtpsy_0565" /db_xref="GeneID:7382939" CDS complement(584053..584844) /locus_tag="Dtpsy_0565" /note="PFAM: ABC-2 type transporter; KEGG: mfa:Mfla_1269 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF01061" /transl_table=11 /product="ABC-2 type transporter" /protein_id="YP_002552045.1" /db_xref="InterPro:IPR000412" /db_xref="InterPro:IPR013525" /db_xref="GI:222109781" /db_xref="GeneID:7382939" /translation="MTILKALWAYRGFILGSVKREFQSKYRNSLLGAAWTVINPLAMI VVYTVIFAEIMRAKLPGVDKAFAYSIYLCAGILTWGLMTEIISRAQNTFIENANLLKK LSFPRLCLPVIVVANAGLNFAIIFSLFTAFLLISGNFPGWPFIALLPLIVVLVVFAIG LGVTLGVLNVFFRDVGQFFGIFLSFWFWLTPIVYTPSILPEELRPYMTLNPIASLIAA FQDVLVAGQWPQWETLWPVTMLAVFFCMLGLWLFRRHAGEMADEL" gene complement(584844..586274) /locus_tag="Dtpsy_0566" /db_xref="GeneID:7382940" CDS complement(584844..586274) /locus_tag="Dtpsy_0566" /EC_number="2.7.7.22" /note="KEGG: pol:Bpro_3999 mannose-1-phosphate guanylyltransferase (GDP); TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein" /codon_start=1 /inference="protein motif:TFAM:TIGR01479" /transl_table=11 /product="mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase" /protein_id="YP_002552046.1" /db_xref="InterPro:IPR001538" /db_xref="InterPro:IPR005835" /db_xref="InterPro:IPR006375" /db_xref="InterPro:IPR013096" /db_xref="GI:222109782" /db_xref="GeneID:7382940" /translation="MHLVSVVLSGGSGTRLWPVSRQSYPKPFMQLGGSTLLGQAIGRG QDCGTDDLIIVTNQDYFFLSRNVVNELSDVPHTQYLLEPKGRNTAPAIALAALACARL HGPEAVMLVLPADHLIPDTEAFVACALEAARHAQQGQLVVFGISPTGPETGFGYIEVE KPSRHTQQALRFVEKPDLPTAQRYLASGRYYWNSGMFCFTAGAILQAMKEHAPEVLHA TENAWAASHTQDGATKFDARTFGLLPDISIDYAVMERARNVTLVPAKFGWSDVGSWPA VAQAHPADTSGNTFVDGQRTEFVAVGTTGTHVQVESHGPKVVATVGVQDLVIVDTPDA LLVAHKSVAQKVKTVVDTLRDRRHDSTQLPAAVHRPWGTYATLKEEDGYKVKRITVNP GQALSLQYHHQRAEHWVVVQGTAMVQIGEDEHHTLPGQYRYIPLKEKHRLTNIGQDEL VLIEVQCGDYLGEDDIVRLADTYGRA" gene 586445..587539 /locus_tag="Dtpsy_0567" /db_xref="GeneID:7382941" CDS 586445..587539 /locus_tag="Dtpsy_0567" /note="PFAM: glycosyl transferase family 4; KEGG: pol:Bpro_3998 glycosyl transferase, family 4" /codon_start=1 /inference="protein motif:PFAM:PF00953" /transl_table=11 /product="glycosyl transferase family 4" /protein_id="YP_002552047.1" /db_xref="InterPro:IPR000715" /db_xref="GI:222109783" /db_xref="GeneID:7382941" /translation="MIVVLFLSFVVAAMAGMVLIRWAHDHASRYRPDMPQRFHVGDVP RLGGGSVLFGMLVGWVWIAAALTSANIPWSWSSMLACVGAILPATLGGISEDLTQKLS VRLRLWLTLLSAVLACWWLGLSVPRLGLPWVDEAMLVLPWLGVVVAALAICGLPHAFN IIDGYNGLAGVVALLVCFAVAHVALQVGDRQLAAMVLCLAGATAGFLVWNFPKGLLFA GDGGAYLWGVVIAIGVILLVQRHPQVSPWFPPLLLIYPIWETFFSSYRKFARGISPSV ADALHFHQLIYRRIVRSVFNDDEARRVLMRNNRTSPYLWGFTLLTVVPAVVFWDNTPV LMAFCGLFVVTYVAAYLAIVRFKVPGWLRR" sig_peptide 586445..586516 /locus_tag="Dtpsy_0567" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.937) with cleavage site probability 0.912 at residue 24" gene 587586..588491 /locus_tag="Dtpsy_0568" /db_xref="GeneID:7382942" CDS 587586..588491 /locus_tag="Dtpsy_0568" /EC_number="2.7.2.8" /note="KEGG: ajs:Ajs_0588 acetylglutamate kinase; TIGRFAM: acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase" /codon_start=1 /inference="protein motif:TFAM:TIGR00761" /transl_table=11 /product="acetylglutamate kinase" /protein_id="YP_002552048.1" /db_xref="InterPro:IPR001048" /db_xref="InterPro:IPR001057" /db_xref="InterPro:IPR004662" /db_xref="GI:222109784" /db_xref="GeneID:7382942" /translation="MPPNIQPDLLGIAPRDKAEILAQALPYIRKFHGKTMVIKYGGNA MTDPALQADFAEDVVLLKLVGMNPVVVHGGGPQIEQALNRLGKKGEFIQGMRVTDAET MEVVEWVLAGEVQQDIVGLIHQAGGKAVGLTGRDGGMIRAKKLKMVDNKDPSVEHDVG QVGDIVAIDPSVVKALQDDAFIPVISPIGFGEENESYNINADVVASKLATVLQAEKLV LLTNTPGVLDKEGKLLTDLTAREIDALFADGTISGGMLPKISGALDAAKAGVNAVHII DGRVPHSMLLEILTDQAYGTMIRSH" gene 588686..589330 /locus_tag="Dtpsy_0569" /db_xref="GeneID:7382943" CDS 588686..589330 /locus_tag="Dtpsy_0569" /note="PFAM: regulatory protein TetR; KEGG: ajs:Ajs_0589 nucleoid occlusion protein" /codon_start=1 /inference="protein motif:PFAM:PF00440" /transl_table=11 /product="transcriptional regulator, TetR family" /protein_id="YP_002552049.1" /db_xref="InterPro:IPR001647" /db_xref="GI:222109785" /db_xref="GeneID:7382943" /translation="MTEFTPATDAPASTDDAPAARRRPRPGERREQILQTLAAMLEQP GAERITTAALAARLQVSEAALYRHFASKAQMFEALIDFIEQSVFTLVHQIMERGGESE GAQRAARITAMVLQFGERNPGMVRVMVGDALVFENERLQQRMNLFFDKVEATLRQCLR PVADADGSATPTVQTQVRAAALSDLIRGRLQRYARTGFRRMPTEHLDATLALWL" gene 589537..590202 /locus_tag="Dtpsy_0570" /db_xref="GeneID:7382944" CDS 589537..590202 /locus_tag="Dtpsy_0570" /note="PFAM: regulatory protein TetR; KEGG: ajs:Ajs_0591 TetR family transcriptional regulator" /codon_start=1 /inference="protein motif:PFAM:PF00440" /transl_table=11 /product="transcriptional regulator, TetR family" /protein_id="YP_002552050.1" /db_xref="InterPro:IPR001647" /db_xref="GI:222109786" /db_xref="GeneID:7382944" /translation="MSLSPSPTKTVRAPRREGRALHKGQHTKAVIIDAALGLATHIGL EGLSIGALADVTGMSKSGVFAHFGSREELQISVIREYHTRFEQEVFYPAMQAPRGVPR LRALFANWMKRTSIEIDSGCIYISGAVEFDDRTGPVRDALANSVMTWQAAMKRAIQQC KECGEIRDDVSEDQMLFEIHGLILALHYEARFLHTPGSIDRANTGFDNILARYSALPG HRG" gene 590267..592063 /locus_tag="Dtpsy_0571" /db_xref="GeneID:7382945" CDS 590267..592063 /locus_tag="Dtpsy_0571" /note="PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ajs:Ajs_0592 acyl-CoA dehydrogenase domain-containing protein" /codon_start=1 /inference="protein motif:PFAM:PF00441" /transl_table=11 /product="acyl-CoA dehydrogenase domain protein" /protein_id="YP_002552051.1" /db_xref="InterPro:IPR005829" /db_xref="InterPro:IPR006090" /db_xref="InterPro:IPR006091" /db_xref="InterPro:IPR006092" /db_xref="InterPro:IPR013107" /db_xref="GI:222109787" /db_xref="GeneID:7382945" /translation="MPTYTPPLRDMQFVLHEVFKVTDEFKAMPAHAEVDADTINAVLE EAGKFAAGVAFPLNISGDTEGCTLNQQTHEVTTPKGFKEAYAQYVEGGWAALSCDTAY GGQGLPFVMNQCLYEMLNSANQAWTMYPGLSHGAYEALHAHGTDEQKKLYLPKLTSGE WTGTMCLTEPHCGTDLGLLRTKAEPQADGTYKITGNKIFISAGEHNFTSNIVHLVLAR LPDAPKGSKGISLFVVPKFKVNADGSLGERNPIYCTGLEHKMGIHGNATAQIAIDGAI GTLVGEPNKGLAAMFVMMNAARLGVGNQSLGLTEVAFQNALAYAKDRIQMRSLSGTKA KDKEADPIIVHPDVRKMLLTAKAYAEGARALQIFCTLLLDKAHSHPDEKVRKDSDELV ALLTPIVKAFITDNGHIATNACMQVFGGHGFIKEWGMEQFVRDNRINMIYEGTNTVQS LDLLGRKVLGNNGATLKKFGKLVGQLVAEEGVNEKMAEFINPIAYLGDQMTKFTTEIG FRGFQNPDEVGAAAVDYLRVAGHLVFGYMFARMAQVALREIAAGNTDPFYQAKLQTAR FYFAKLFPEVHTLMRTARAGSKVLMDTDAALA" gene 592116..592550 /locus_tag="Dtpsy_0572" /db_xref="GeneID:7382946" CDS 592116..592550 /locus_tag="Dtpsy_0572" /note="KEGG: ajs:Ajs_0593 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0593" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002552052.1" /db_xref="GI:222109788" /db_xref="GeneID:7382946" /translation="MRQALAAIIFAAIAAPAWAQMSPVGLWRSVDDKTGEAKAEIRIA ETSGVLNGRIEKSLKKDADPAATCTECKDDRKGKAIAGLEIIRGVKKADDREVWEGGK ILDPENGKEYRASLTPIEGGKRLEVRGFLGPFWRTQTWQRVQ" sig_peptide 592116..592175 /locus_tag="Dtpsy_0572" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 1.000 at residue 20" gene 592651..595053 /locus_tag="Dtpsy_0573" /db_xref="GeneID:7382947" CDS 592651..595053 /locus_tag="Dtpsy_0573" /note="PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: ajs:Ajs_0594 3-hydroxyacyl-CoA dehydrogenase" /codon_start=1 /inference="protein motif:PFAM:PF02737" /transl_table=11 /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding" /protein_id="YP_002552053.1" /db_xref="InterPro:IPR001753" /db_xref="InterPro:IPR006108" /db_xref="InterPro:IPR006176" /db_xref="GI:222109789" /db_xref="GeneID:7382947" /translation="MSRFQVKKVAVLGAGVMGAQIAAHLVNVKVPVVLFDLPAKEGPK NGIVTRAVENLKKLKPSPLGVADDAALIQQANYEENMALLGECDLIIEAIAERMDWKL DLYKKIAPHVAPHAIVASNTSGLSITQLSEALPDAIKPRFCGIHFFNPPRYMVLVELI NTPTTRPEVLDQLEAFVTSGLGKGVVRAHDTPNFIANRVGIAGMLSTMKEVENFGLTF DVVDDLTGKKLGRASSGTFRTADVVGLDTMAHVIKTLQDNLNEQTDPFYGSFGTPAVL QKLIELGNLGQKAKAGFYKKVGRDILRFELESEEYVPAGAKADEVYGRMLKKPAAERL KLLRNAEGAQGRFLWAILRNSFHYAAVHLATIADTARDVDQAMRWGFGMSQGPFELWQ EAGWLEVARMVQEDIDAGKALSKAPLPEWVFKGPVADAGGVHTAQGSWSARQGKFVPR RQLPVYERQYFPEKLLGEDNLPDWRKAGTTISETDALRTWTLDGKVLIASIQSKMHAI SPDVMEGLMEAVDLAEREYDGMVIWSGDAPFSVGADLQATMPAYVVAGIAAIEGVEHE LQNLMLRLRYAQVPVVSAIHGMALGGGCELAVHSARRVAHMESYIGLVEVGVGLVPGA GGLTYIARRAAENAAASTGKDLLPFLTEGFTAAAMAKVGTSALESKKLGYLLDSDLIV PHKDEVLFVAINEAKAMAAGGWRAPHKRLFPVAGRSGIATIRGSLVNMRDGGFISEHD QHIATLIAEVVCGGDVDAGTLVSEEYLMALERKAFCALIEHPKTQERILGMLNTGKPV RN" sig_peptide 592651..592722 /locus_tag="Dtpsy_0573" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.893) with cleavage site probability 0.574 at residue 24" gene 595075..596271 /locus_tag="Dtpsy_0574" /db_xref="GeneID:7382948" CDS 595075..596271 /locus_tag="Dtpsy_0574" /note="TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: ajs:Ajs_0595 acetyl-CoA acetyltransferase" /codon_start=1 /inference="protein motif:TFAM:TIGR01930" /transl_table=11 /product="acetyl-CoA acetyltransferase" /protein_id="YP_002552054.1" /db_xref="InterPro:IPR002155" /db_xref="GI:222109790" /db_xref="GeneID:7382948" /translation="MKQIQDAYIVAATRTPIGRSHKGFFRNYRPDDLLATTLKSALAQ VPGLDPASIEDIICGCAIPEAQQGLNVARIGAVLAGLPTSVGGITVNRFCASGLSAVA MAADRIRVGEAEVMIAAGVESMSMVPMMGNAPSLSPSIFERDGDVGIAYGMGLTAEKV AQQWKVSREAQDAFALESHRRAIAAQQAGEFADEITPIEVTDRTAHLETGEVIAGTRT VSLDEGARPDTSLEGLAKLRTVFAARGTVTAGNSSQTSDGAGALILASEAAVKRFGLT PLARFVSFASKGVPPSIMGIGPIEAIPAALRYAGLKQDDIGWYELNEAFAAQSLAVIN TLGLDTAKVNPMGGAIALGHPLGATGAIRSATVVHALRRKQLKYGMVTMCVGMGQGAA GIFERV" gene 596352..597248 /locus_tag="Dtpsy_0575" /db_xref="GeneID:7382949" CDS 596352..597248 /locus_tag="Dtpsy_0575" /note="KEGG: ajs:Ajs_0596 putative hydrolase" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0596" /transl_table=11 /product="putative hydrolase" /protein_id="YP_002552055.1" /db_xref="GI:222109791" /db_xref="GeneID:7382949" /translation="MQSETLMVDGAVPLALRVYVPRPGPARASVVIGGAMGVRQAFYG PFAAWLAQQGLRVTTFDYRGQGESLNGGMREVRANLFDWARDYDAVIAHAAQALPGQP LLLLGHSLGAQLPGLLGEHARVSGLLSVAAGSGYWRDNAPRIRRAMPAFWHVLVPLSV RLCGYFPGRRLRAVGDLPAGVMLQWRRWCLHPRYSVGAEGESAQRSYAAVRFPVHAWS MQDDELMTWRGTQSLLALYANAPCSVERIAPHEAQARRIGHFGFFREQFRDTLWPRAL QQLEALAQAQPQGTAGATATAG" gene 597274..598116 /locus_tag="Dtpsy_0576" /db_xref="GeneID:7382950" CDS 597274..598116 /locus_tag="Dtpsy_0576" /note="KEGG: ajs:Ajs_0597 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0597" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002552056.1" /db_xref="GI:222109792" /db_xref="GeneID:7382950" /translation="MTTHHSIHPLDAALALSSSHSEGAGQYTGHTSPAYWNMVGPFGG ITAATLLQAVMQHPDRLGEPLSLTVNYAGALAEGPFTLQATPVRTNRSTQHWTLSILQ AGADGAPVVTTTATVVTAARRETWGAADTPMPQVPAPAQCKPVQPAFRSEWLQRYEMR PVTGALPEQWDDSGDTSLSQLWMRDAPARALDFCALAALADVFFPRVWLRRARQVPAG TVSITVYFHAGADLLAQTGTGYLLGQARAQEFRNGFFDQTVQLWNEAGAMLATSHQIV YYKE" gene 598133..598909 /locus_tag="Dtpsy_0577" /db_xref="GeneID:7382951" CDS 598133..598909 /locus_tag="Dtpsy_0577" /note="PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ajs:Ajs_0598 enoyl-CoA hydratase" /codon_start=1 /inference="protein motif:PFAM:PF00378" /transl_table=11 /product="Enoyl-CoA hydratase/isomerase" /protein_id="YP_002552057.1" /db_xref="InterPro:IPR001753" /db_xref="GI:222109793" /db_xref="GeneID:7382951" /translation="MSTTNADILVHAEEGVTTITFNRVEKKNSITTAMYAQLADAFEA AAQDASVRVVVLQGDVAIFSAGNDIGDFLQQPPATQDAPVFRFLRAIATFPKPVLAAV CGPAVGIGTTLLFHCDLVYAGDNAAFSMPFVNLGLCPEAASSLFAPQMLGYHRAAEAL LLGEPFMAEAALEVGFVNRVVPPTECNMVAQAQARKLAAKPLSALIETKRLLKKSQTA AVLERMAEEGQSFGRMLREPAAREAFTAFMDKRRPDFSAC" gene 599089..599571 /locus_tag="Dtpsy_0578" /db_xref="GeneID:7382952" CDS 599089..599571 /locus_tag="Dtpsy_0578" /note="PFAM: thioesterase superfamily protein; KEGG: ajs:Ajs_0599 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF03061" /transl_table=11 /product="thioesterase superfamily protein" /protein_id="YP_002552058.1" /db_xref="InterPro:IPR003736" /db_xref="InterPro:IPR006683" /db_xref="GI:222109794" /db_xref="GeneID:7382952" /translation="MSKPASLPVAFEPEFIAGLRQIFEEKIPFNHLLGLKITRLEPAA VAARIDMRPDLVGHFAYNRLHGGVISAGLDAMGGLAVMAAIGAKHMDEVPMDRLHRFA KLGTIDLRIDYLRPGIGSHFELRAEVLRLGSRVATTRMEFLGPQGELMSAGAAAYIVS " gene 599758..600312 /locus_tag="Dtpsy_0579" /db_xref="GeneID:7382953" CDS 599758..600312 /locus_tag="Dtpsy_0579" /note="PFAM: protein of unknown function DUF583; KEGG: ajs:Ajs_0600 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF04519" /transl_table=11 /product="protein of unknown function DUF583" /protein_id="YP_002552059.1" /db_xref="InterPro:IPR007607" /db_xref="InterPro:IPR010916" /db_xref="GI:222109795" /db_xref="GeneID:7382953" /translation="MAVQNPFFGKREPDTFQSRQPSSALGGTTTTTSTPTAAPATRTA VSTASSATAEGSGSKLTVGPNIKLKGVEITDCDTLVVEGTVEATMDSRVIQITEQGAF RGSAEIDIAEIHGEFDGTLTVRQKLVIFSTGKVSGKIRYGKVVIEEGGQLSGEIEVGL GGGARMSAASGSSSAASSAALAAA" gene complement(600366..600839) /locus_tag="Dtpsy_0580" /db_xref="GeneID:7382954" CDS complement(600366..600839) /locus_tag="Dtpsy_0580" /note="PFAM: thioesterase superfamily protein; KEGG: ajs:Ajs_0601 thioesterase superfamily protein" /codon_start=1 /inference="protein motif:PFAM:PF03061" /transl_table=11 /product="thioesterase superfamily protein" /protein_id="YP_002552060.1" /db_xref="InterPro:IPR006683" /db_xref="GI:222109796" /db_xref="GeneID:7382954" /translation="MDNPWSQAKPKIVPMSQDRPASHSQLPADKELVLKVIPMPADTN GNGDIFGGWVMAQVDLAGSVLPARYIRGRMATVAVNEFIFKQPVRVGDLLSFFAEVTR IGNTSMTVQVEVYAEHIRTQGSYVKVTEASLTYVAIDENGRPRPIQKPGDESVAP" gene 600841..602652 /locus_tag="Dtpsy_0581" /db_xref="GeneID:7382955" CDS 600841..602652 /locus_tag="Dtpsy_0581" /note="PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_0602 ABC transporter related" /codon_start=1 /inference="protein motif:PFAM:PF00005" /transl_table=11 /product="ABC transporter related" /protein_id="YP_002552061.1" /db_xref="InterPro:IPR001140" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR017871" /db_xref="InterPro:IPR017940" /db_xref="GI:222109797" /db_xref="GeneID:7382955" /translation="MRRYGEAIASDSPRVRSDRATLQRLLPYLWQYKWRVVAAMAFMV GAKLANVGVPLLLKRLVDAMTLPAGSTTALLVVPMGLLLAYGALRLANSVFNELRELV FAKATHGAARAIALKTFEHLHALSLRFHLERQTGGMTRDIERGVRGIESLVSFALFNL AATLVEVLLVLFILARQFDVWFAVITLTALVLYVAFTVGVTQWRIQFRRQANQFDSAA HSKAIDSLLNYETVKYFNNEQFEARRYDESLEQLRQAQLKSRSTLGLLNSGQQLIIAV GLVAMLWRATEGVAAGRMTLGDLVMVNAFMIQIYIPLNFLGVIYREIRQNLTDLDKMF TLMDREQEVADAPGAQPLTDLHTPTVRFEDVHFAYDPARPVLQGVSFTIPAGKTVAVV GPSGAGKSTLSRLLYRFYDLQGGRITIAGQDIRTVTQDSLRRAIGIVPQDTVLFNDTV AYNIAYGRTGASQAEVEQAARAAHIHAFIAAQPQGYDTMVGERGLKLSGGEKQRVAIA RTLLKNPPILIFDEATSALDSANERAIQAELASAAQNKTTLVIAHRLSTVVDAHEILV IEAGRIVERGTHAQLLAHGGHYARMWALQKNDGQNGL" gene 602707..603021 /locus_tag="Dtpsy_0582" /db_xref="GeneID:7382956" CDS 602707..603021 /locus_tag="Dtpsy_0582" /note="PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: ajs:Ajs_0603 MazG nucleotide pyrophosphohydrolase" /codon_start=1 /inference="protein motif:PFAM:PF03819" /transl_table=11 /product="MazG nucleotide pyrophosphohydrolase" /protein_id="YP_002552062.1" /db_xref="InterPro:IPR004518" /db_xref="GI:222109798" /db_xref="GeneID:7382956" /translation="MDIAALQRELRAFAAARDWQPFHTPKNLAMALMVETAELQELFQ WLTPEQSRTFTQDATAHERVGDEMADVLLYLLQLADHAGVDLEVAVRRKLAKNAVKHP VP" gene complement(603135..604166) /locus_tag="Dtpsy_0583" /db_xref="GeneID:7382957" CDS complement(603135..604166) /locus_tag="Dtpsy_0583" /note="TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: ajs:Ajs_0604 TRAP dicarboxylate transporter, DctP subunit" /codon_start=1 /inference="protein motif:TFAM:TIGR00787" /transl_table=11 /product="TRAP dicarboxylate transporter, DctP subunit" /protein_id="YP_002552063.1" /db_xref="InterPro:IPR004682" /db_xref="GI:222109799" /db_xref="GeneID:7382957" /translation="MKLRTFLTSAVAAAAALAFGTPALAQNYKSEYRMSLVLGTAFPW GKGGEIWAQKVKEKTQGRINIKLYPGVSLIQGDQTREFSALRQGVIDMAVGSTINWSP QVKALNLFSLPFLFPDYAAVDAVTQGEVGKSIFQTLEKAGVVPLAWGENGYREISNSK HAIKSPADLKGLKIRVVGSPLFLDTFTALGANPTQMSWADAQPAMASGAVDGQENPIA VYQAAKLHTVAQKHVTMWGYMNDPLIFVVNKDVWNSWTPADREAVKQAAIEAGKEEIA IARKGMIEADKPLLKDIAANGVTVTQLSPAERDAFVKATRPVFEKWKGQIGADLVSAA EKAIAARKQ" sig_peptide complement(604089..604166) /locus_tag="Dtpsy_0583" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.999 at residue 26" gene complement(604200..605498) /locus_tag="Dtpsy_0584" /db_xref="GeneID:7382958" CDS complement(604200..605498) /locus_tag="Dtpsy_0584" /note="TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: ajs:Ajs_0605 TRAP dicarboxylate transporter, DctM subunit" /codon_start=1 /inference="protein motif:TFAM:TIGR00786" /transl_table=11 /product="TRAP dicarboxylate transporter, DctM subunit" /protein_id="YP_002552064.1" /db_xref="InterPro:IPR004681" /db_xref="InterPro:IPR010656" /db_xref="GI:222109800" /db_xref="GeneID:7382958" /translation="MIATLLFVAFLVLMFVGVPIGAALGLAGAAAIALANAETQWFGL LAVPQNFYAGLGKYPLLAIPMFVLVGSIFDRSGVALRLVNFAVSMVGRGPGMLPLVAI AVAMFLGGISGSGPANAAAVGGVMIAAMSRAGYPGSFSASVVGAAAATDILIPPSVAF IIYSVLVPGASVPALFAAGMVPGVLAGIALIVPAVWMARRHRMGHLEADMPRPPFWRS LREASWGLAAPVLILGGMRAGWFTPTEAAVVAVFYGLFVGMVIHRTIQVRDLFTILRE AGELSAVILIVVSLAGIFAFSLSTLGVIDPVANAIVNSGLGEYGVLALLILLLITVGM FLDGISIFLIFVPLLLPIMQHYQWNPVWFGVILTLKVALGQFTPPLAVNLMVSCRIAG VRMESTVRWVGPMLLAMFLVMVAVIAFPQLALWLPAQLGY" sig_peptide complement(605385..605498) /locus_tag="Dtpsy_0584" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.456 at residue 38" gene complement(605495..606085) /locus_tag="Dtpsy_0585" /db_xref="GeneID:7382959" CDS complement(605495..606085) /locus_tag="Dtpsy_0585" /note="PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: ajs:Ajs_0606 tripartite ATP-independent periplasmic transporter DctQ" /codon_start=1 /inference="protein motif:PFAM:PF04290" /transl_table=11 /product="Tripartite ATP-independent periplasmic transporter DctQ component" /protein_id="YP_002552065.1" /db_xref="InterPro:IPR007387" /db_xref="GI:222109801" /db_xref="GeneID:7382959" /translation="MSSLPTPGPADDAAPDGARVSSAPASSEPRSLRIEDWLTVIVMA LLALITFANVLVRYFTNSSFAWTEELSVFLMIVLALVAGSAAVARDRHIRIEFFCDSG SAARRRRLAQLGALLVAVLFAVIAVLSVRVVWDDYRFEETSPGIGVPQWWYSVWLPIL SLLITWRAIGLLIRRTRQPDVEFLGNDADDNGERQP" gene 606304..607251 /locus_tag="Dtpsy_0586" /db_xref="GeneID:7382960" CDS 606304..607251 /locus_tag="Dtpsy_0586" /note="PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_0607 LysR family transcriptional regulator" /codon_start=1 /inference="protein motif:PFAM:PF00126" /transl_table=11 /product="transcriptional regulator, LysR family" /protein_id="YP_002552066.1" /db_xref="InterPro:IPR000847" /db_xref="InterPro:IPR005119" /db_xref="GI:222109802" /db_xref="GeneID:7382960" /translation="MRAMETKWLEDFVSLAETRSFSRSAQLRHVTQPAFSRRIQALEA WAGTDLVDRSSYPTRLTAAGNTLYDQALEVLQALQNTRAMLRAHTSAGTDMIEFAVPH TLAFTFFPAWVSALRADFGPLKSRLIALNVHDAVMRLVEGGCDLLISYHHPSQPLQLD PDRYEMVTLGQEVLAPYAKAGADGQPLFCLPGRPGEPLPYLGYAPGAYLGRVTELILK QAGTAIHLDRVYETDMAEGLKAMALEGHGVAFLPYSAVKKELRSRKLLSAAPPDAQDL QMVMEVRAYREKPSRKEPAKGLAQSLWTYLQTRAGQNPI" gene 607433..608323 /locus_tag="Dtpsy_0587" /db_xref="GeneID:7382961" CDS 607433..608323 /locus_tag="Dtpsy_0587" /note="PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: ajs:Ajs_0608 extracellular solute-binding protein" /codon_start=1 /inference="protein motif:PFAM:PF00497" /transl_table=11 /product="extracellular solute-binding protein family 3" /protein_id="YP_002552067.1" /db_xref="InterPro:IPR001638" /db_xref="GI:222109803" /db_xref="GeneID:7382961" /translation="MNCKQGWKALGAAVALCCAVGAQAQGVLERVRGGGPLVLAHRES SVPFSYVHEGKPMGYALDLCLHIAEVVRKKTGMKNMPVQLVQVTPANRIEMVKTGKAD MECGSTTNNAERRKDVAFTIPHFITGARLLVPAASTVTRMEDLEGKKLVSTKGTTPYK AAEQANRERLMRIQLVEAPDHEAAVVMVEKGQADAFVMDDVLLYGLAANRPDPKALKV VGRFVTTEPLAIMLPKNDPEFKKLVDEEMRRLIVSNEINAIYDKWFMQPIAPTHRALN LPVSYLLRDFWKYPTDQVPF" sig_peptide 607433..607507 /locus_tag="Dtpsy_0587" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.992 at residue 25" gene 608446..609345 /locus_tag="Dtpsy_0588" /db_xref="GeneID:7382962" CDS 608446..609345 /locus_tag="Dtpsy_0588" /note="PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: ajs:Ajs_0609 extracellular solute-binding protein" /codon_start=1 /inference="protein motif:PFAM:PF00497" /transl_table=11 /product="extracellular solute-binding protein family 3" /protein_id="YP_002552068.1" /db_xref="InterPro:IPR001638" /db_xref="GI:222109804" /db_xref="GeneID:7382962" /translation="MKKHLLAAAITVLAAGSAFAQANDTLAKIKSTGAVTLGVRESSG LGYTLGNGKYVGFHTEMGERILADIQKQLGLANMEIKYQPVTSQNRIPLVTNGTVDIE CGSTTNNTARQKDVAFAVTTYVEEVRIAVNAKSGITGIKDLNGKTIVTTTGTTSVQTL RKNKRADGLTFKEVMGKDHADSFLMLETGRADAFIMDGSILAANISKSKNPADFKIVG EVLSVEPIACMLRKDDPAFKKAVDDSIKRQIADGSLAKLYDKWFMQPIPPANVKIGLP LSEATKNAWAHPNDKPMESYEVK" sig_peptide 608446..608508 /locus_tag="Dtpsy_0588" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.620 at residue 21" gene 609466..610218 /locus_tag="Dtpsy_0589" /db_xref="GeneID:7382963" CDS 609466..610218 /locus_tag="Dtpsy_0589" /note="TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_0610 polar amino acid ABC transporter, inner membrane subunit" /codon_start=1 /inference="protein motif:TFAM:TIGR01726" /transl_table=11 /product="polar amino acid ABC transporter, inner membrane subunit" /protein_id="YP_002552069.1" /db_xref="InterPro:IPR000515" /db_xref="InterPro:IPR010065" /db_xref="GI:222109805" /db_xref="GeneID:7382963" /translation="MNWDWQVFCQDTITQEVGQSCFGKNGDITYLDWMLSAWGWTVSV SLLSLAVALVVGSLVGTLRTLEGRPWTVRLGNAWVELFRNIPLLVHIFVWYHVVPSIF PAMKSLPGFVLVVFALGFFTSARIAEQVRSGIQALPRGQRYAGMALGFTTFQYYRYVL LPMAFRIIIPPLTSETMNVFKNSSVAFAVSVAELTMFAMQAQEETSRGIEVYLAVTAL YIISAFAINRIMAFIEKRTRVPGLIAAGGGGH" gene 610220..610891 /locus_tag="Dtpsy_0590" /db_xref="GeneID:7382964" CDS 610220..610891 /locus_tag="Dtpsy_0590" /note="TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_0611 polar amino acid ABC transporter, inner membrane subunit" /codon_start=1 /inference="protein motif:TFAM:TIGR01726" /transl_table=11 /product="polar amino acid ABC transporter, inner membrane subunit" /protein_id="YP_002552070.1" /db_xref="InterPro:IPR000515" /db_xref="InterPro:IPR010065" /db_xref="GI:222109806" /db_xref="GeneID:7382964" /translation="MNLNIDWSFFTWELFSNFVIKGLYFSLVLTVIATVGGILLGTVL ALMRLSGKKWLDVPATIYVNGMRSIPLVMVILWFFLLVPMIIGRPIGAEVSAVVTFIA FEAAYFSEIMRAGIQSIPRGQVFAGQALGMTYGQNMRLVVLPQAFRNMLPVLLTQTII LFQDTSLVYAIGAYDMLKGFEIAGKNYGRPIEAYLAAAVVYFILCYALSWLVKRLHKK IAIIR" gene 610914..611651 /locus_tag="Dtpsy_0591" /db_xref="GeneID:7382965" CDS 610914..611651 /locus_tag="Dtpsy_0591" /note="PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_0612 ABC transporter related" /codon_start=1 /inference="protein motif:PFAM:PF00005" /transl_table=11 /product="ABC transporter related" /protein_id="YP_002552071.1" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR017871" /db_xref="GI:222109807" /db_xref="GeneID:7382965" /translation="MIELKNVSKWYGSFQVLTDCSTNIQKGEVVVVCGPSGSGKSTLI KTINALEPFQKGEIFVDGVAVHDPKTDLPKLRSRVGMVFQHFELFPHLSVTENLTIAQ IKVLGRNPTDAKARGLKMLERVGLTAHKDKFPGQLSGGQQQRVAIARALSMDPIVMLF DEPTSALDPEMVGEVLDVMVGLAQEGMTMMCVTHEMGFARKVSNRVIFMDVGGKILED CSKEEFFGNPEARQPRTKDFLNKILQH" gene complement(611943..612995) /locus_tag="Dtpsy_0592" /db_xref="GeneID:7382966" CDS complement(611943..612995) /locus_tag="Dtpsy_0592" /EC_number="4.3.1.12" /note="PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: ajs:Ajs_0613 ornithine cyclodeaminase" /codon_start=1 /inference="protein motif:PRIAM:4.3.1.12" /transl_table=11 /product="Ornithine cyclodeaminase" /protein_id="YP_002552072.1" /db_xref="InterPro:IPR003462" /db_xref="GI:222109808" /db_xref="GeneID:7382966" /translation="MTRLIDLPTLAAFVHERGAARCMTELATELRADFLRWESFDKSA RTASHSPRGVIELMPVADDALYSFKYVNGHPGNPASGLPTVMAFGVLAEVRTGYPLLL SELTLTTALRTAATSALAAQALARPGSRRMALVGNGAQAEFQALAFHALLGIRELRVY DTDPAATDKLVRNLAHVDGLTVERAASTAEAVRGADIVTTVTADKSRATILTPAMVEP GMHLNAVGGDCPGKTELHPDVLRGARVVVEYEPQSRVEGEIQQLPADHPVTELWRVLR GDAPGRTRADEVTVFDSVGFALEDYSALRYLYQQAQARGLGVDVELVPTDDPKDLFGR TRGASVQGRTRLRRVA" gene 613108..613539 /locus_tag="Dtpsy_0593" /db_xref="GeneID:7382967" CDS 613108..613539 /locus_tag="Dtpsy_0593" /note="PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: ajs:Ajs_0614 AsnC family transcriptional regulator" /codon_start=1 /inference="protein motif:PFAM:PF01037" /transl_table=11 /product="transcriptional regulator, AsnC family" /protein_id="YP_002552073.1" /db_xref="InterPro:IPR000485" /db_xref="GI:222109809" /db_xref="GeneID:7382967" /translation="MRNMDDVDREIIALLRADARMPVAALAVRLRVARGTVQNRLRRL EEEGVIVGYTVRLRPESEPHRIRAWMSIAVQGNAAPDVIRALRGEPLVGALHSTNGRW DIVAELHAQSLEEFDLALTRIRLTPGIARTETSILLSTYKL" gene complement(613565..614221) /locus_tag="Dtpsy_0594" /db_xref="GeneID:7382968" CDS complement(613565..614221) /locus_tag="Dtpsy_0594" /note="PFAM: cytochrome c class I; KEGG: ajs:Ajs_0615 cytochrome c, class I" /codon_start=1 /inference="protein motif:PFAM:PF00034" /transl_table=11 /product="cytochrome c class I" /protein_id="YP_002552074.1" /db_xref="InterPro:IPR003088" /db_xref="InterPro:IPR009056" /db_xref="GI:222109810" /db_xref="GeneID:7382968" /translation="MARRIPAMLALALFAGLAWQTAAMAQAGRSKVDIDTRLQQAMAD PKLADELYKVGRKVSAVCANCHGDGGNSTKPSVPNLAGQNPAYLLEQVRQFADGRRRY EFMEGMIRAMNSDEKIGMVLFYAAQPVTPKPVADAALQAKGQEIFGKNCFRCHGDMGR GNDQIARIAGQQTDYLRSTLKRYRDGPNTRANSIMTPNTKLLTDADIESLVAYVSSMQ " sig_peptide complement(614144..614221) /locus_tag="Dtpsy_0594" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.957 at residue 26" gene complement(614318..615154) /locus_tag="Dtpsy_0595" /db_xref="GeneID:7382969" CDS complement(614318..615154) /locus_tag="Dtpsy_0595" /note="TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; KEGG: ajs:Ajs_0616 HAD family hydrolase" /codon_start=1 /inference="protein motif:TFAM:TIGR01484" /transl_table=11 /product="HAD-superfamily hydrolase, subfamily IIB" /protein_id="YP_002552075.1" /db_xref="InterPro:IPR006379" /db_xref="InterPro:IPR013200" /db_xref="GI:222109811" /db_xref="GeneID:7382969" /translation="MLPLASWDELARTCITGVLTDIDDTLTTDGAITADALQALADLK ASGLHVIPITGRPVGWSEPFAAAWPVDSIVAENGAVALLRAPRNFAPNGLQSPCDKRE QLLKLYQQDAATRASNFARMQQVLAEIEAAVPGARRATDSPGRETDIAIDHSEFTHLP QAAIDQAVALMHAAGMNATVSSIHINGWFGAHNKLEGARWIVRELFGRDLDAALERWV YIGDSTNDQLMFAHFPHSVGVANIARFVPQLQHLPRYVTQGERGAGFAELAQSLLAIN DR" gene complement(615172..616797) /locus_tag="Dtpsy_0596" /db_xref="GeneID:7382970" CDS complement(615172..616797) /locus_tag="Dtpsy_0596" /note="TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: ajs:Ajs_0617 peptide chain release factor 3" /codon_start=1 /inference="protein motif:TFAM:TIGR00503" /transl_table=11 /product="peptide chain release factor 3" /protein_id="YP_002552076.1" /db_xref="InterPro:IPR000795" /db_xref="InterPro:IPR004161" /db_xref="InterPro:IPR004548" /db_xref="InterPro:IPR005225" /db_xref="GI:222109812" /db_xref="GeneID:7382970" /translation="MSYAPETRRRRTFAIISHPDAGKTTLTEKLLLFSGAIQIAGAVK GRKASRHATSDWMEIEKQRGISVASSVMQMSYRDHVINLLDTPGHKDFSEDTYRVLTA VDSALMVIDAANGVEAQTRRLIEVCRQRDTPIITFVNKMDREVRDPLDILDEVERELG MPCCPITWPVGQGKSFGGIINLRTQSMTVFQPGSEKRPQDFEVIPLADADKLRARFGQ AFDDALESMELAQGASAPWDHEAFLAGKLTPVFFGSGVNNFGVMEVLDAVVDMSPPPG PRKSSLVVNKQTVEKTILPEDKGFSGVVFKVQANMDANHRDRIAFVRVASGKYTPGMK LKVQRTAKELRPTSVVTFMSQRREAVEEAYAGDIIGFTTHGGVQLGDTITDGANLQFT GLPFFAPEMFMTVVLKNPLRTKQLQQGLMQLGEEGAIQVFKPEAGGNMLLGAVGQLQF EVVQHRLNTEYDCDIRLEACQYTGARWITADTPAELREFENAYPMRMARDAADTLAYL CTSPYDVRLAQERFPKIHFHPLREHAGLALQNS" gene 617084..618514 /locus_tag="Dtpsy_0597" /db_xref="GeneID:7382971" CDS 617084..618514 /locus_tag="Dtpsy_0597" /EC_number="3.3.1.1" /note="KEGG: ajs:Ajs_0618 S-adenosyl-L-homocysteine hydrolase; TIGRFAM: adenosylhomocysteinase; PFAM: S-adenosyl-L-homocysteine hydrolase; S-adenosyl-L-homocysteine hydrolase, NAD binding" /codon_start=1 /inference="protein motif:TFAM:TIGR00936" /transl_table=11 /product="adenosylhomocysteinase" /protein_id="YP_002552077.1" /db_xref="InterPro:IPR000043" /db_xref="InterPro:IPR015878" /db_xref="GI:222109813" /db_xref="GeneID:7382971" /translation="MSAVLKSPADSAIADISLAEWGRKEIRIAETEMPGLMAIREEFA AKQPLKGARITGSLHMTIQTAVLIETLKALGADVRWASCNIFSTQDHAAAAIAATGTP VFAIKGETLVDYWDYTHRIFDFGPKGSEGEGPNMILDDGGDATLLMHLGKRAEKDASV LANPGSEEERILFAAIKAKLAEDSTWYSRKSAQIIGVTEETTTGVHRLKEMSAKGTLM FRAINVNDSVTKSKFDNLYGCRESLVDGIKRATDVMIAGKVAVVCGYGDVGKGSAQAL RALSAQVWVTEIDPINALQAAMEGFKVVTMEWAADKADIFVTTTGNRDVITFEHMKAM KDQAIVCNIGHFDNEIQVAKLEEHCQWEEIKPQVDHVIFPDGKRIILLAKGRLVNLGC GTGHPSFVMSNSFANQTIAQIELFTHPEGYDVGKVYVLPKHLDEKVARLHLKKVGAML TELSDEQAAYIGVPKQGPYKPDTYRY" gene 618627..619625 /locus_tag="Dtpsy_0598" /db_xref="GeneID:7382972" CDS 618627..619625 /locus_tag="Dtpsy_0598" /note="PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: ajs:Ajs_0619 ribosomal RNA methyltransferase RrmJ/FtsJ" /codon_start=1 /inference="protein motif:PFAM:PF01728" /transl_table=11 /product="ribosomal RNA methyltransferase RrmJ/FtsJ" /protein_id="YP_002552078.1" /db_xref="InterPro:IPR002877" /db_xref="GI:222109814" /db_xref="GeneID:7382972" /translation="MRADVFLVEGGYAATRSQAQRLIAAGVQWRLAPTLPWQKVAKNG DDIPAGVEVQLLDAAEAKYLSRGGLKLEGALAATGLQVAGLRCLDVGQSTGGFTDCLL AHGAAQVIGVDVGHGQLHERLRADPRVVCVEGVNARALTPEALQDACDVALSEVIEDV EDNDTQPQAPYAWMRNGGMVDDEYDDSDDAKEHEIESFKAERAAKAKARADGSLPVQR RRRPGCEDVDITPAFDLVTGDLSFISLTLVLPALVPLLKEQGQLLMLVKPQFELQPGQ VGKGGIVRDAQLYPQVEQRIRDCCTELGLHVVAWIDSPIEGGDGNREFFIHARRKA" gene 619622..620461 /locus_tag="Dtpsy_0599" /db_xref="GeneID:7382973" CDS 619622..620461 /locus_tag="Dtpsy_0599" /EC_number="1.5.1.20" /note="KEGG: ajs:Ajs_0620 5,10-methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase" /codon_start=1 /inference="protein motif:TFAM:TIGR00676" /transl_table=11 /product="5,10-methylenetetrahydrofolate reductase" /protein_id="YP_002552079.1" /db_xref="InterPro:IPR003171" /db_xref="InterPro:IPR004620" /db_xref="GI:222109815" /db_xref="GeneID:7382973" /translation="MSLSTAFPVSFEFFPPKTPEGADKLRAVRQQLYARRPEFCSVTY GAGGSTQAGTFGTVREILAEGVSAASHFSCIGATKDGVRAQLAELKAMGVKRLVALRG DLPSGYGIGGEFHYASDLVAFIRAETGRDFHIEVAAYPEVHPQARSSDADLQAFATKV RAGADSAITQYFFNADAYLRFVQDVRRLGLDVPVVPGIMPIMGASQLLRFSDACGAEI PRWIRLRLQGYGDDVASIRAFGLDVVTHLCEQLRREGVPGLHFYTMNQSAATLEICDR LGL" gene 620472..621155 /locus_tag="Dtpsy_0600" /db_xref="GeneID:7382974" CDS 620472..621155 /locus_tag="Dtpsy_0600" /note="KEGG: ajs:Ajs_0621 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0621" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002552080.1" /db_xref="GI:222109816" /db_xref="GeneID:7382974" /translation="MGNIGSFFPSSSSYPLRVCGMSPVIAFLLFTTLSLAMASPASAQ TRYSCRDEQGAVYTLARPCPKGMVTTAVSAGPVEPRVEPRSYAPTPSRRSSAMREVPE YESYMSGRCRTLQNSIRGASANGSSYDVIAGMQREYRRDCSDEESDAASRYYRERREA RSQRRTEREREEQAQLAQEEQESRKALQCAESKRILAAKRARTDLTPGERNDLRRFET NVITRCGDF" sig_peptide 620472..620603 /locus_tag="Dtpsy_0600" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.981 at residue 44" gene 621175..621891 /locus_tag="Dtpsy_0601" /db_xref="GeneID:7382975" CDS 621175..621891 /locus_tag="Dtpsy_0601" /note="TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: ajs:Ajs_0622 rare lipoprotein A" /codon_start=1 /inference="protein motif:TFAM:TIGR00413" /transl_table=11 /product="rare lipoprotein A" /protein_id="YP_002552081.1" /db_xref="InterPro:IPR005132" /db_xref="InterPro:IPR012997" /db_xref="GI:222109817" /db_xref="GeneID:7382975" /translation="MGRWLAGVLLAAVLAGCAAPPADAPPVVAPGPTQALPGPAGAQA DSPPDSGVSAPPRARKEGRVRSAPSSPREADTAIERGREDEEESGVLLGRGLASWYGG SLHGRRTASGERFDRGELTAAHRTLPFGARVCVRSLVNGKVVVVRVNDRGPFAPGRVI DLSQAAAQELGMVGLGIKPVEIWHMGPDDDSCPEDLPELDPSSTPAASPAVAPAGAAQ ARTNQGAARTTPRKSRARRR" sig_peptide 621175..621231 /locus_tag="Dtpsy_0601" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.985) with cleavage site probability 0.961 at residue 19" gene complement(621936..622826) /locus_tag="Dtpsy_0602" /db_xref="GeneID:7382976" CDS complement(621936..622826) /locus_tag="Dtpsy_0602" /note="PFAM: protein of unknown function DUF519; KEGG: ajs:Ajs_0623 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF04378" /transl_table=11 /product="protein of unknown function DUF519" /protein_id="YP_002552082.1" /db_xref="InterPro:IPR007473" /db_xref="GI:222109818" /db_xref="GeneID:7382976" /translation="MFSYRHAFHAGNHADVLKHTVLIATLQHLLQKDAALTVLDTHAG AGLYRLDGDYASTSAESADGILRLVPPAAPPALAPALQDYVDMVRAFNQGDATRVYPG SPFITQRLLRAQDKLKLFELHPTDARSLAGNIAQLEAGRQVAVLQEDGFEGVKKFIPP PARRALVLCDPSYEIKSDYLRVQALLQDALKRFATGVYAVWYPIIPRAEAHDLPRRLK TLAQKAGKPWLHATLTVKSSKLASPAAGEGARRPGLPASGMFVVNPPFTLQGVLREAL PQMAQLLAQDRNASHTLEVG" gene 623042..624928 /locus_tag="Dtpsy_0603" /db_xref="GeneID:7382977" CDS 623042..624928 /locus_tag="Dtpsy_0603" /note="PFAM: tyrosine protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: ajs:Ajs_0624 protein kinase" /codon_start=1 /inference="protein motif:PFAM:PF07714" /transl_table=11 /product="serine/threonine protein kinase" /protein_id="YP_002552083.1" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR001245" /db_xref="InterPro:IPR002290" /db_xref="InterPro:IPR017441" /db_xref="GI:222109819" /db_xref="GeneID:7382977" /translation="MSSLPPRFTPASVAHHVDALPAGTRLGEFEIVALLGVGGFGMVY QAFDHSLLRFVAIKEYMPAALAGRADGHSLWVRSSSDEQSFQAGLASFVDEARLLAQF DHPSLVKVFRFWEANHTAYMVMPLYSGLTLKQARAHMRTPPPEEWLRKVLWSVTSALR VLHEGQTLHRDISPDNIFLQDHGPPVLLDLGAARHAISDRDQKHTAVLKVNYAPIEQY TDAASHLHQGPWSDLYSLGAVVHGCLCNDTPLPATLRAIRDRMVSFSRVARTVRKQFG VEYSRPFVDAVSQCLALQPQDRPQSIDAFLQTMGMTAAPAGLDGFDFRAELGSIWVEP SSKDAQGVAVPMIDLTAMSQPQDSRPQTATVVAAPASAPSDLMVSPVEPATVFAETVA DAGDTQAFADTREMPQHDAPTGSRHPTHARTPRPQKAARHASAPRVATAGHGGRARLV WGMAASLALLVIASSPWWGGRENAPRYTPENEIITELASPAPAPEPAEVVMVSHEAAD PASAPMAVQQEAASVAEARPAVVSKPRLVRKAAEATAPAPAPAPVVPAPEPAPPPPAP SRPAVPARVPGPDEACEASSFFARPLCIHEQCQKPGLANHPVCVENRRRQEAEERRRQ LYSQ" gene 625083..625511 /locus_tag="Dtpsy_0604" /db_xref="GeneID:7382978" CDS 625083..625511 /locus_tag="Dtpsy_0604" /note="TIGRFAM: ribosomal protein L13; PFAM: ribosomal protein L13; KEGG: ajs:Ajs_0625 50S ribosomal protein L13" /codon_start=1 /inference="protein motif:TFAM:TIGR01066" /transl_table=11 /product="ribosomal protein L13" /protein_id="YP_002552084.1" /db_xref="InterPro:IPR005822" /db_xref="InterPro:IPR005823" /db_xref="GI:222109820" /db_xref="GeneID:7382978" /translation="MSTFSAKPAEVVHEWFVIDATDKVLGRVASEVALRLRGKHKAIY TPHVDTGDYIVIINASKLKVTGTKSLDKVYYRHSGYPGGITATNFRDLQAKHPGRALE KAVKGMLPKGPLGYAMIKKLKVYGGAEHPHTAQQPKALEI" gene 625522..625914 /locus_tag="Dtpsy_0605" /db_xref="GeneID:7382979" CDS 625522..625914 /locus_tag="Dtpsy_0605" /note="PFAM: ribosomal protein S9; KEGG: ajs:Ajs_0626 ribosomal protein S9" /codon_start=1 /inference="protein motif:PFAM:PF00380" /transl_table=11 /product="ribosomal protein S9" /protein_id="YP_002552085.1" /db_xref="InterPro:IPR000754" /db_xref="GI:222109821" /db_xref="GeneID:7382979" /translation="MIGEWNNGTGRRKSSVARVFLKKGSGKITVNGKDIQQYFGRETS IMIAKQPLALTNHVETFDIQINVHGGGESGQAGAARHGITRALIDYDATLKPALSQAG FVTRDAREVERKKVGLHSARRAKQFSKR" gene 626055..626771 /locus_tag="Dtpsy_0606" /db_xref="GeneID:7382980" CDS 626055..626771 /locus_tag="Dtpsy_0606" /note="KEGG: aav:Aave_4051 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Aave_4051" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002552086.1" /db_xref="GI:222109822" /db_xref="GeneID:7382980" /translation="MRYRLLRRRLTISAPRVTVRSALPWPLRWAAVAIVLGLCAAMTL WAFDLGKRIAGLDAGSREELQRLRAEVSQLREHNRLQHEKQEAAGSLRIAEQAAMDRL LEQLRQLEADNRSLREDLGFFEKLTPTGKPGNLTIRGLHAETLEGGGQLRWQVLAMQP MRNAPEFKGRLELLLAGTLNGAEWSSTSPAVIQPLQFRQYRRVQGVAALPPGAMVKTV TARLMDGTSLRAAQTFSLEP" sig_peptide 626055..626195 /locus_tag="Dtpsy_0606" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.998 at residue 47" gene 626826..627224 /locus_tag="Dtpsy_0607" /db_xref="GeneID:7382981" CDS 626826..627224 /locus_tag="Dtpsy_0607" /note="PFAM: protein of unknown function DUF583; KEGG: ajs:Ajs_0628 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF04519" /transl_table=11 /product="protein of unknown function DUF583" /protein_id="YP_002552087.1" /db_xref="InterPro:IPR007607" /db_xref="GI:222109823" /db_xref="GeneID:7382981" /translation="MFSRKKPPPIKSLIAQGTRVQGDVLFADGLRVDGEVIGDLRSSA EPSIVVVSESAKVEGAVHAAHVIVNGTVEGPVHATELLEVQPKARITGNVHYKALEMH QGAVIAGQLCPAAPLLLEEKPTLKLASNAQ" gene 627285..627659 /locus_tag="Dtpsy_0608" /db_xref="GeneID:7382982" CDS 627285..627659 /locus_tag="Dtpsy_0608" /note="TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: ajs:Ajs_0629 iron-sulfur cluster insertion protein ErpA" /codon_start=1 /inference="protein motif:TFAM:TIGR00049" /transl_table=11 /product="iron-sulfur cluster assembly accessory protein" /protein_id="YP_002552088.1" /db_xref="InterPro:IPR000361" /db_xref="InterPro:IPR016092" /db_xref="InterPro:IPR017870" /db_xref="GI:222109824" /db_xref="GeneID:7382982" /translation="MSAVAENTTTEMPAPILFTDSAAAKVAELIAEEGNPDLKLRVFV QGGGCSGFQYGFTFDEITNEDDTTMTKNGVSLLIDAMSYQYLVGAEIDYKEDLQGAQF VIKNPNAASTCGCGSSFSVEDH" gene complement(627722..628843) /locus_tag="Dtpsy_0609" /db_xref="GeneID:7382983" CDS complement(627722..628843) /locus_tag="Dtpsy_0609" /note="PFAM: protein of unknown function UPF0075; KEGG: ajs:Ajs_0630 anhydro-N-acetylmuramic acid kinase" /codon_start=1 /inference="protein motif:PFAM:PF03702" /transl_table=11 /product="protein of unknown function UPF0075" /protein_id="YP_002552089.1" /db_xref="InterPro:IPR005338" /db_xref="GI:222109825" /db_xref="GeneID:7382983" /translation="MDTPPRWFIGLMSGTSLDGVDGVLAHFSGQKCAVAQHASAPLAP DLRAELLALNSTGHDELHRAALAANALARTYAKVVHRLLDQAGLTATAVQALGAHGQT VRHRPQAFDGTGYTLQLNQPALLAEITGITVVADFRSRDVAAGGQGAPLVPAFHRGVF GQAGRTVAVLNLGGISNLSILRADGTTVGFDCGPANALMDHWCERHTGQPYDHEGAWA RSGHVLPALLEAMLDEPFLALAPPKSTGRDLFHPQWLATRLAASAVGTAPQDVQATLA EYTALTCVQALSRHARDCGLLIVCGGGALNRYLMERLQQLAPTVRVESSDHHGLPPLQ VEAAAFAWLAHQCVNGQTASLPAVTGARGERILGAIYPA" gene complement(628856..630220) /locus_tag="Dtpsy_0610" /db_xref="GeneID:7382984" CDS complement(628856..630220) /locus_tag="Dtpsy_0610" /note="PFAM: Peptidase M23; KEGG: ajs:Ajs_0631 peptidase M23B" /codon_start=1 /inference="protein motif:PFAM:PF01551" /transl_table=11 /product="Peptidase M23" /protein_id="YP_002552090.1" /db_xref="InterPro:IPR016047" /db_xref="GI:222109826" /db_xref="GeneID:7382984" /translation="MNNGLTTACLVLLNQLKQSAQKHPKRITAAVATLLLTGGGGAFA VASFAPDPADLPVRTVTQAVQSLAANEPLSSLVDIPQYALYRSDVTRSADTAESILQR LGVADPAASAFLRSDANVRQNLLGRTGRSMSAETTDDHRLTRLTARWAPDDSGSFKRL VVERQQDGSFASRIETAPLTVGSRLAGGIIRSSLFAATDAANIPDAVAVQLAEVFSGD IDFRRALRKEDRFSVVYETLEADGEPLRSGRVLSAEFHNGDKTHSAVWFQEPGATKGS YYTLDGESMRRAYLSSPVEFSRVSSGFAMRFHPIHKTWRAHLGTDFAAPTGTSVRTVG DGVVDFAGVQNGYGNVVYIKHRNQHVTVYAHLSRIDVRKGESVEQGQKIGAVGSTGWA TGPHLHFEFRVAGEHKDPMVIARQSEAAQPVSAAARPAFDRLAGNMRVQLSSAAQILQ ASAE" sig_peptide complement(630086..630220) /locus_tag="Dtpsy_0610" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.987) with cleavage site probability 0.875 at residue 45" gene 630414..631646 /locus_tag="Dtpsy_0611" /db_xref="GeneID:7382985" CDS 630414..631646 /locus_tag="Dtpsy_0611" /note="KEGG: ajs:Ajs_0632 tyrosyl-tRNA synthetase; TIGRFAM: tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein" /codon_start=1 /inference="protein motif:TFAM:TIGR00234" /transl_table=11 /product="tyrosyl-tRNA synthetase" /protein_id="YP_002552091.1" /db_xref="InterPro:IPR001412" /db_xref="InterPro:IPR002305" /db_xref="InterPro:IPR002307" /db_xref="InterPro:IPR002942" /db_xref="GI:222109827" /db_xref="GeneID:7382985" /translation="MNQSAVTTFPVTDGVGRALEVSLRGVDELLPQEEWTQKLARSEA TGQPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLGHQVIFLIGDFTTLIGDPSGRNS TRPPLTAEQIKVNAETYYTQAAKVLDPARTEIRYNSEWCDQLGARGMIQLSAKYTVAR MMERNDFHQRFTDGSSISLHEFLYPLLQGYDSVALRSDLELGGTDQKFNLLMGRHLQQ EWGQEPQCVLTMPLLVGLDGVDKMSKSKNNYIGITEDANSMFAKVLSISDTLMWDWYT LLSFKSLGEIAALKAEVAAGRNPKDAKVMLAKEITARFHSAALADAAEQDFVNRSKGG IPDDIPEVRLAGAPLGIGALLKQANLAPSTSEANRLIDGGGVRVDGVVVSDKGLKLEA GSYVVQVGKRKFARVTLA" gene complement(631717..632145) /locus_tag="Dtpsy_0612" /db_xref="GeneID:7382986" CDS complement(631717..632145) /locus_tag="Dtpsy_0612" /note="TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: ajs:Ajs_0633 hemerythrin-like metal-binding protein" /codon_start=1 /inference="protein motif:TFAM:TIGR02481" /transl_table=11 /product="hemerythrin-like metal-binding protein" /protein_id="YP_002552092.1" /db_xref="InterPro:IPR012312" /db_xref="InterPro:IPR012827" /db_xref="InterPro:IPR016131" /db_xref="GI:222109828" /db_xref="GeneID:7382986" /translation="MPFMPWTAELELGLPEIDDQHRQLVALTNALHDELSAASPRRSA VGEILEGLVDYTHNHFIVEEVLFQQHDYAETPAHKAEHDGFTRKAMDLLTRFDGGQEV TLEALEFLKQWLVHHICKVDRAYLPFMREALQAQRTAALA" gene complement(632397..633407) /locus_tag="Dtpsy_0613" /db_xref="GeneID:7382987" CDS complement(632397..633407) /locus_tag="Dtpsy_0613" /note="PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_0634 LysR family transcriptional regulator" /codon_start=1 /inference="protein motif:PFAM:PF03466" /transl_table=11 /product="transcriptional regulator, LysR family" /protein_id="YP_002552093.1" /db_xref="InterPro:IPR000847" /db_xref="InterPro:IPR005119" /db_xref="GI:222109829" /db_xref="GeneID:7382987" /translation="MNSPLLPASAPPIAHLRTRPVAVGHWRAFLAVARHLNFRAAAEE LALTQSAVSRQIQALEDEVGVPLFLRHTRAVELTSAGGQLQRAVAPALERMDAAVRLV RQTAGRKSVAITTWASFASMWLIPRMEEFQRDNPDIDIRIDATDTIVDLETADVDLAL RSSVPGTQAAGAQRLFGEQLAVVASPWLLNSMPPIRTPADVAQFTLIEAGDAHRMPYF EWITWRRWFELHALGRLQPKRWLYFNYAQQIVQAALAGQGLALARMPLIAESLASGDL QEVLPGHRLDSPLVYWLVVGPRSGQRPEIQAFSAWLLLQAEATRQAVGEVPDTDLIDD IS" gene 633637..633999 /locus_tag="Dtpsy_0614" /db_xref="GeneID:7382988" CDS 633637..633999 /locus_tag="Dtpsy_0614" /note="KEGG: ajs:Ajs_0635 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0635" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002552094.1" /db_xref="GI:222109830" /db_xref="GeneID:7382988" /translation="MTTSQVLHSQASSVPAGVAGPELCTIPQGAARSLHPRAPMQLRV VSGLAWVTLSDGPHGWREDSGDLMLHAGQSVCVASGQHAVVEPMGREPLQFQWRSAAA VRAPSPQHAAPRGDVCRA" gene 634191..635621 /locus_tag="Dtpsy_0615" /db_xref="GeneID:7382989" CDS 634191..635621 /locus_tag="Dtpsy_0615" /note="TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; KEGG: ajs:Ajs_0636 glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase" /codon_start=1 /inference="protein motif:TFAM:TIGR01173" /transl_table=11 /product="UDP-N-acetylglucosamine pyrophosphorylase" /protein_id="YP_002552095.1" /db_xref="InterPro:IPR001451" /db_xref="InterPro:IPR005835" /db_xref="InterPro:IPR005882" /db_xref="GI:222109831" /db_xref="GeneID:7382989" /translation="MTALDIIIMAAGKGTRMKSRIPKVLQRLAGRPLLHHVLGQAASL QARRVVVVTGHGATEVEAACAGLAGAGGTFDLKFVRQEPQLGTGHAVQQATPALAGDG TVVVLSGDVPLTQAATLRALVEAGAGERLALLTVRLPNPTGYGRIVRGEGGTVQRIVE HKDANDAERAIDEVYSGIMAVPAQRLAGWLARLTNDNAQGEYYLTDIVSMAVADGVPV AAHCIGDALQVAGVNSPAQLAELERAHQRAQAAALMEQGVRLADPARFDLRDDARSGA RGEILCAQDVEIDVGCIFTGRVELGEGARIGAYCHISNATIAAGAVVHPFTHIDGEKA GAHVGEGALIGPFARLRPGAQLGREVHIGNFVEVKNSTLADGAKANHLAYLGDASVGE RVNYGAGSITANYDGANKHRTVIEADVHIGSNCVLVAPVTIGAGGTVGGGSTITKDTP PGGLSVARGRQVSIANWKRPAKQAKG" gene 635626..636396 /locus_tag="Dtpsy_0616" /db_xref="GeneID:7382990" CDS 635626..636396 /locus_tag="Dtpsy_0616" /note="PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ajs:Ajs_0637 histidine kinase" /codon_start=1 /inference="protein motif:PFAM:PF02518" /transl_table=11 /product="histidine kinase" /protein_id="YP_002552096.1" /db_xref="InterPro:IPR003594" /db_xref="InterPro:IPR003661" /db_xref="InterPro:IPR004358" /db_xref="InterPro:IPR005467" /db_xref="GI:222109832" /db_xref="GeneID:7382990" /translation="MTGEGIPPADTLAQLRSELAQARQQISDMAAAQEDFLRGVSHDL RAPLRHVTSYGALVREVLQEQPPQVDEALGFLATMEQSARRMAQMIDGLQAIARARSA ALRPRAVALTAAVQEARQALGAAAEGAAWNIAPDLPVVQADPELLAQLLVQLLGNAVK FSRGVAQPRVQVQAEPAAPGGVRITVRDNGVGFDGTRAQQLFGVFQRMHREAEFEGVG AGLALCQAIAQRHGAHIQATAVPGAGCTVALEWPAAAR" gene complement(636428..636769) /locus_tag="Dtpsy_0617" /db_xref="GeneID:7382991" CDS complement(636428..636769) /locus_tag="Dtpsy_0617" /note="KEGG: ajs:Ajs_0638 MerR family transcriptional regulator" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0638" /transl_table=11 /product="MerR family transcriptional regulator" /protein_id="YP_002552097.1" /db_xref="GI:222109833" /db_xref="GeneID:7382991" /translation="MPTPPFVDHALAELLDEQPRLTLEDLARTCCMGPDWVVERLEAG LLQGEQAGGHWRFSSASVVRARRLARLESTFDADPELAALTADLIEEVTALRQRLREL QTRLGLPAAMP" gene complement(636772..637767) /locus_tag="Dtpsy_0618" /db_xref="GeneID:7382992" CDS complement(636772..637767) /locus_tag="Dtpsy_0618" /note="PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; KEGG: ajs:Ajs_0639 heat shock protein DnaJ domain-containing protein" /codon_start=1 /inference="protein motif:PFAM:PF00226" /transl_table=11 /product="heat shock protein DnaJ domain protein" /protein_id="YP_002552098.1" /db_xref="InterPro:IPR001623" /db_xref="InterPro:IPR002939" /db_xref="InterPro:IPR003095" /db_xref="GI:222109834" /db_xref="GeneID:7382992" /translation="MEFKDYYQILGVARDATAADIKKAYRKLARRYHPDVSKEADAAA RMAEVNEANTVLSDPEKRAAYDALGREAPHRAGQDFRPPPNWDAGFEFTGTPGAEGMD AAQFSDFFEQLFGRAARAQRSRHAGPSAHDGSGRTSPQRGRDHHASIELDLRDAYLGA ERTLTLRGARLDDSGHLVNEERQLQVNIPKGVREGQLIRLGGQGGPGLGGAPAGDLFL EVHFKPDARWRAEDRDVYQSVTLAPWEAELGGPVEVQTPGGATVEVTVPPRWKPGRKL RLKERGIPAATPGDLYLELHVALPPATNEAQQQAYRALAQAFPQFQPRKPSTQGA" gene complement(637893..638384) /locus_tag="Dtpsy_0619" /db_xref="GeneID:7382993" CDS complement(637893..638384) /locus_tag="Dtpsy_0619" /note="PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: ajs:Ajs_0640 AsnC family transcriptional regulator" /codon_start=1 /inference="protein motif:PFAM:PF01037" /transl_table=11 /product="transcriptional regulator, AsnC family" /protein_id="YP_002552099.1" /db_xref="InterPro:IPR000485" /db_xref="GI:222109835" /db_xref="GeneID:7382993" /translation="MESDSSLDAVDLQLLDLLQRDASLSNQALAEQVHVSPPTCLRRV RRLHTLGLIERQVALLQPDRLAALQGHGLAAIVEVALDRQGAEHLDAFEARAVAEDEV QQCWRVSPGPDFVLIVHTRDMPGYLALSQRLFTQDANVRNVKAFFSVHRAKFETKVPL ALI" gene 638521..640431 /locus_tag="Dtpsy_0620" /db_xref="GeneID:7382994" CDS 638521..640431 /locus_tag="Dtpsy_0620" /note="TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS); KEGG: ajs:Ajs_0641 D-fructose-6-phosphate amidotransferase" /codon_start=1 /inference="protein motif:TFAM:TIGR01135" /transl_table=11 /product="glucosamine/fructose-6-phosphate aminotransferase, isomerizing" /protein_id="YP_002552100.1" /db_xref="InterPro:IPR000583" /db_xref="InterPro:IPR001347" /db_xref="InterPro:IPR005855" /db_xref="GI:222109836" /db_xref="GeneID:7382994" /translation="MCGIVGAVSTRNIVPILVQGLQRLEYRGYDSCGVAVHEASLGEM PAGGLHRARSTARVAELLAQVNHEHLQGATGIAHTRWATHGAPAVHNAHPHFSHGPGA APAQAERPGRVALVHNGIIENHEELRAELQARGYVFSSQTDTEVIAHLVDSLYDGDLF QAVRAATARLHGAFAIAVIHKDEPHRVVGARAGSPLVLGVGEGEHFLASDAMALAGVT DQIVYLEEGDLVDLQLGRYWITTADGQPLDAGSRPVRTVHAHSGAVELGPYRHYMQKE IFEQPRAIADTLHGLQGIVPELFDGVGQPGQQGAAAWRVFKEIDSVLILACGTSYYSG CTAKYWLEGIAGIPTQVEVASEYRYRTSVPNPRTLVVTISQSGETADTLAALRHAQSL GMRHTLTICNVATSAMVRECELAYVTRAGVEIGVASTKAFTAQLAGLFLLTLALAQSR GRLTEEAEGNYLKAMRHLPAALQAVLALEPQIISWSEDFAKKENALFLGRGLHYPIAL EGALKLKEISYIHAEAYPAGELKHGPLALVTSSMPVVTVAPNDALLEKLKSNMEEVRA RGGVLYVLADADTHIDSSEGLHVIRMPEHYGALSPLLHVVPLQLLAYHTACARGTDVD KPRNLAKSVTVE" gene complement(640597..641232) /locus_tag="Dtpsy_0621" /db_xref="GeneID:7382995" CDS complement(640597..641232) /locus_tag="Dtpsy_0621" /note="PFAM: NAD-dependent epimerase/dehydratase; NmrA family protein; KEGG: ajs:Ajs_0642 NmrA family protein" /codon_start=1 /inference="protein motif:PFAM:PF05368" /transl_table=11 /product="NmrA family protein" /protein_id="YP_002552101.1" /db_xref="InterPro:IPR001509" /db_xref="InterPro:IPR008030" /db_xref="GI:222109837" /db_xref="GeneID:7382995" /translation="MRIALIGATGFIGSAIRQEALSRGHHVTAIVSNPARLPAAQGLE VQGADALDSQQLRAVLHGHDVVISAFSGHANSDVYGYYLKGMHSIIDAARATGVRLLV VGGAGSLEVEPGVQLLDTPSFPEQWKATAEGARAALKLLRETPDVDWTVLSPPPMIHP GTRTGQYRTANDAVIMGDSGPSDISLEDYAVAMVDEAESAKHRGLRFTVAS" gene 641348..642250 /locus_tag="Dtpsy_0622" /db_xref="GeneID:7382996" CDS 641348..642250 /locus_tag="Dtpsy_0622" /note="PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_0643 LysR family transcriptional regulator" /codon_start=1 /inference="protein motif:PFAM:PF03466" /transl_table=11 /product="transcriptional regulator, LysR family" /protein_id="YP_002552102.1" /db_xref="InterPro:IPR000847" /db_xref="InterPro:IPR005119" /db_xref="GI:222109838" /db_xref="GeneID:7382996" /translation="MPSPVGDLNLLRAFLAVADARSFTAAAERLHIARPQVSLQIRRL ENVLGAALFHRTTRTVTLTDAGQRLFEESAPLMQGLEQVLQHAGSRGSGLRGRLRVSA PVEYAVQVMSPVVAEFAVRHPEVSLELVVSDKVQDLVGEGIDVSIRVGWLRNSSARVA KLGEFGQAVLASPEYLARCPRPEAPEDLAHHRWIALTLLPAPLTWSFTNGTKDITVRM APKLRTDSAVALRALLLNGAGVSVGSLLHLESDIRSGALVRLLPEWTLPKGGVYAVYP PGTAIAPAARAFVELLKGEMLRRA" gene complement(642345..642935) /locus_tag="Dtpsy_0623" /db_xref="GeneID:7382997" CDS complement(642345..642935) /locus_tag="Dtpsy_0623" /note="KEGG: bwe:BcerKBAB4_2465 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:BcerKBAB4_2465" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002552103.1" /db_xref="GI:222109839" /db_xref="GeneID:7382997" /translation="MQQATTQALKAPLPGADMKTAQRDVLVQTLKKRFESHMHRHPTV AWADVHARLNANKLKALQDMEATGGEPDVVGSAAADGTYLFYDCTAESPSGRRSLCYD AQALHARKLHKPQSNAIEAAAAMGVTLLTEAQYRALQEVEDFDQKTSSWIWTPPDVRE RGGALFCDRRYGRVFVYHNGAESYYAARGFRASLNV" gene 643321..644382 /locus_tag="Dtpsy_0624" /db_xref="GeneID:7382998" CDS 643321..644382 /locus_tag="Dtpsy_0624" /note="PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ajs:Ajs_0645 alcohol dehydrogenase" /codon_start=1 /inference="protein motif:PFAM:PF00107" /transl_table=11 /product="Alcohol dehydrogenase zinc-binding domain protein" /protein_id="YP_002552104.1" /db_xref="InterPro:IPR002328" /db_xref="InterPro:IPR006140" /db_xref="InterPro:IPR013149" /db_xref="InterPro:IPR013154" /db_xref="GI:222109840" /db_xref="GeneID:7382998" /translation="MTVKAYGAHASDRPLQPLEIARRAPGAHDVQIGIAYCGVCHSDL HQVRSEWAGTLYPCVPGHEIVGRVVAVGAQVSAFRAGDLVGVGCIVDSCRHCQDCDEG LENYCGHMVGTYNGPTEDAPGHTLGGYSQQIVVHERYVLRVRHPQGQLAAVAPLLCAG ITTYSPLRHWKVGPGHRVGVVGIGGLGHLGIKLAHAMGAHVVAFTTSESKRAAALSLG AHEVVVSRHPQEMAAHANSLDFILNTVAAPHDLDAFLRLLRRDGAMTLVGAPASPHPS PNVFNLIMKRRTLAGSLIGGIPETQEMLDFCAEHGIVADIELIRADEINTAYERMLKG DVQYRFVIDIATLAESAGA" gene complement(644379..644648) /locus_tag="Dtpsy_0625" /db_xref="GeneID:7382999" CDS complement(644379..644648) /locus_tag="Dtpsy_0625" /note="TIGRFAM: translation initiation factor IF-1; PFAM: S1 IF1 family protein; KEGG: ajs:Ajs_0646 translation initiation factor IF-1" /codon_start=1 /inference="protein motif:TFAM:TIGR00008" /transl_table=11 /product="translation initiation factor IF-1" /protein_id="YP_002552105.1" /db_xref="InterPro:IPR004368" /db_xref="InterPro:IPR006196" /db_xref="GI:222109841" /db_xref="GeneID:7382999" /translation="MSNKEQLIEMQGKVDEVLPDSRFRVVLENGHTLIAYSGGKMRKH RIRVLAGDTVSLEMSPYDLTKGRITFRHLEPRAGGAPRRPSPHRR" gene 645153..648566 /locus_tag="Dtpsy_0626" /db_xref="GeneID:7383000" CDS 645153..648566 /locus_tag="Dtpsy_0626" /EC_number="2.7.13.3" /note="KEGG: ajs:Ajs_0647 multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; CHASE3 domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein" /codon_start=1 /inference="protein motif:PRIAM:2.7.13.3" /transl_table=11 /product="histidine kinase" /protein_id="YP_002552106.1" /db_xref="InterPro:IPR001789" /db_xref="InterPro:IPR003594" /db_xref="InterPro:IPR003661" /db_xref="InterPro:IPR004358" /db_xref="InterPro:IPR005467" /db_xref="InterPro:IPR007891" /db_xref="GI:222109842" /db_xref="GeneID:7383000" /translation="MPVRLLVGFALAAFAALLIAVLTYRSNDERAKAVDNLNATVERI TQIQMVWSHLKDAESAKRGYLLSGQEQTLGLFTVAQAAVPVALEKLRGMTRGSLLEQQ RFDQLQGLATKRMTELAHIVALQREGRREEALEAMRGDGQATMETTRTLVREMLNTEQ QQLQAQREVWEGAFGISAYLTWGSAAVLLLLTCASAVMTMAEYRSREVENWIKGNLVR LGTRLQGEQRIHDMAGAVIGYLATELDARVGAIYVTQGHGVFERMGGYALAPDTGPAA VRAGEGLLGQALQSRTLQHVRHVPSGYLPVTSGTGQATPAELVMMPIVLNGVALAVVE MGWFRTVAPHEVDFLVRAGEQLAQAVRGALDRSRLESLLDETQRQAEELQAQQEELRV NNEELEQQSRMLQESQNLMQAQQAELEHSNAQLEAQTEQLQYQKQRLLTAQDALEAKA RDLAQASQYKSEFLANMSHELRTPLNSSLILAKLLADNKQQNLTAEQVRYAQTIHNAG TDLLNLINDILDLSKIEAGQTSVEIGQVTVAKVVAGVMEPLRAQAQDKGLQFNAVVEP GVPAFITSDAQRLAQILKNLLSNALKFTARGEVTLRVFAGDNDTLCFAVRDTGIGIAP DQQERIFDAFHQADGSTHRKYGGTGLGLSISRDLAQLLGGSIAVQSAPGEGSVFTLTL PVTAPLLSDAGERQAKMPVAPTPAGRAAEPPHASQPEAPAAKPCAPVHVVPDDREQLE QGRYTILVIEDDPRFARILCDLAHEMGFQCVIASTGSDGLAAALEYGPSAVVLDMNLP DFSGLGVLDQLKRNPATRHIPVHVVSVADYMQEAMERGAIGYALKPVKREELEQALLH MQAKFTQSMRRVLVVEDDARQRESVHHLLATDGVEIVGAATARQALDLLKGSTFDCVV MDLHLPDLNGYELLQQMAEQEEVSFPPVIVYTGRNLSRDEEQQLRRFSKSIIIKDARS PERLLDEVTLFLHQVESTLPDDRRRMLQLARDRESTFEGRTILVVEDDVRNVFALSSV LEPTGARVEIARNGREALEALERSNAAGESAVDLVLMDIMMPEMDGFAAMAEIRRRPE WRRLPIIALTAKAMKDDQEKCLAAGANDYIAKPLDVEKLLSLVRVWMPK" sig_peptide 645153..645215 /locus_tag="Dtpsy_0626" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.992) with cleavage site probability 0.857 at residue 21" gene 648610..649443 /locus_tag="Dtpsy_0627" /db_xref="GeneID:7383001" CDS 648610..649443 /locus_tag="Dtpsy_0627" /note="PFAM: MCP methyltransferase CheR-type; SMART: MCP methyltransferase CheR-type; KEGG: ajs:Ajs_0648 MCP methyltransferase, CheR-type" /codon_start=1 /inference="protein motif:PFAM:PF01739" /transl_table=11 /product="MCP methyltransferase, CheR-type" /protein_id="YP_002552107.1" /db_xref="InterPro:IPR000780" /db_xref="GI:222109843" /db_xref="GeneID:7383001" /translation="MPHQRKTAEIEQQLLIEAIYLRYHYDFRGYAQSSLKRRLQAALT RFDCETLSQLQHRLLHERGVFPALLDYLTVQVSDVFRDPEYFRALREKVVPLLRTYPS LKIWVAGCSTGEEAYSLAILLREEGLLERSLIYATDINSTALQRAEAGVYDIERVPGF TENHARSGGRSSLSDHYSAAYGRVVFDKSLRRHIVFSDHSLATDSVFAEVHLISCRNV LIYFDRTLQDRALGLFREALCRRGFLGLGAKESLRFSSHAPAFEDFVAPERIFQKRGD A" gene 649440..650039 /locus_tag="Dtpsy_0628" /db_xref="GeneID:7383002" CDS 649440..650039 /locus_tag="Dtpsy_0628" /EC_number="3.1.1.61" /note="PFAM: CheB methylesterase; KEGG: ajs:Ajs_0649 CheB methylesterase" /codon_start=1 /inference="protein motif:PRIAM:3.1.1.61" /transl_table=11 /product="CheB methylesterase" /protein_id="YP_002552108.1" /db_xref="InterPro:IPR000673" /db_xref="GI:222109844" /db_xref="GeneID:7383002" /translation="MRQAALPRARLDAIAIGGSAGSIEALGVVLPALPAGFHAALLVV LHLPRERPSLLCNIFRQRCALPVREAQDKEPVEPGTVYFAPPDYHLLVDSGPRLSLSV DAPLNFSRPSIDVLFESAADEYGPRLMAVLLSGANSDGARGLRAVQAAGGATVVQSPD SASSMAMPQAALALIQPDQVLPPARIAALLTTLHKEGLS" gene 650036..651184 /locus_tag="Dtpsy_0629" /db_xref="GeneID:7383003" CDS 650036..651184 /locus_tag="Dtpsy_0629" /note="PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ajs:Ajs_0650 response regulator receiver sensor signal transduction histidine kinase" /codon_start=1 /inference="protein motif:PFAM:PF02518" /transl_table=11 /product="response regulator receiver sensor signal transduction histidine kinase" /protein_id="YP_002552109.1" /db_xref="InterPro:IPR001789" /db_xref="InterPro:IPR003594" /db_xref="InterPro:IPR003661" /db_xref="InterPro:IPR004358" /db_xref="InterPro:IPR005467" /db_xref="GI:222109845" /db_xref="GeneID:7383003" /translation="MIFAPPAAQPASHRTGACVKCLIVDDVPENLVALQALLKDEDVE ILMAGSGAQALELLLAHNDVALALLDVQMPEMNGFELAELIRGSERTRHIPLIFITAG SRDQGWQFRGYEKGAVDFLYKPVDPHMLVNKARVFFDLQRQRHALARELQERTEALYI NEMLMAVLSHDLRSPLSAIMAVASALQRAPEPAKVQALACNVQQAGRRMGRMIEDLLD VTRARQHGRLAIEPAPMDLGQQAQRVVQEVRAGHPERHLRLEQQGDLRGEWDEERLGQ MLANLLGNAMHHGTPDQPVELSLDGAAADTVVLRVSNGGGIDAELLPRLFAPFTGRRN RAGQYQGLGLGLFIVHQIVQAHGGTIDAASQAGRTCFTVTLPRRAVAA" gene complement(651237..651608) /locus_tag="Dtpsy_0630" /db_xref="GeneID:7383004" CDS complement(651237..651608) /locus_tag="Dtpsy_0630" /note="PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: ajs:Ajs_0651 response regulator receiver protein" /codon_start=1 /inference="protein motif:PFAM:PF00072" /transl_table=11 /product="response regulator receiver protein" /protein_id="YP_002552110.1" /db_xref="InterPro:IPR001789" /db_xref="GI:222109846" /db_xref="GeneID:7383004" /translation="MRILYVEDNCELRDTIGLLMEGEGRTVVTCATAEEALQRDAAQP HDVVVSDVSLPGMSGLDLCRHLLASNPQRWVVLCSGYPLEHGVGTLGPHVRSLLKPFE LEELEELLDVIASHLQSASPA" gene complement(651768..652430) /locus_tag="Dtpsy_0631" /db_xref="GeneID:7383005" CDS complement(651768..652430) /locus_tag="Dtpsy_0631" /note="PFAM: 2OG-Fe(II) oxygenase; KEGG: ajs:Ajs_0652 DNA-N1-methyladenine dioxygenase" /codon_start=1 /inference="protein motif:PFAM:PF03171" /transl_table=11 /product="2OG-Fe(II) oxygenase" /protein_id="YP_002552111.1" /db_xref="InterPro:IPR005123" /db_xref="GI:222109847" /db_xref="GeneID:7383005" /translation="MPSAPSDDLFADDPAEPSTLALGMQAVLLRGFALAQAPQLLEEV RQVVRQAPWRHMQTPGGKAMSVATTGCGPLSWVSDRRGYRYAALDPLTGKPWPALPAD FAQLAHAAAQEAGFAAFVPDACLINRYAPGTRLSLHQDRDEQDLAAPIVSISLGLPAT FLWGGATRGERALRVPLRHGDTVVWGGVDRLRFHGVLPVAPGQHPATGECRINLTLRK AT" gene 652614..654212 /locus_tag="Dtpsy_0632" /db_xref="GeneID:7383006" CDS 652614..654212 /locus_tag="Dtpsy_0632" /note="PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_0653 AMP-dependent synthetase and ligase" /codon_start=1 /inference="protein motif:PFAM:PF00501" /transl_table=11 /product="AMP-dependent synthetase and ligase" /protein_id="YP_002552112.1" /db_xref="InterPro:IPR000873" /db_xref="GI:222109848" /db_xref="GeneID:7383006" /translation="MNIAHLLQRSALVHGERPALLAGTCLLHDYRTLAARVAALAAHL RAHCGVQPGECVAIFSANGPQYLEALHAIHWCGAISVPVNYKLHARELAYVLADSGAR VVCVSAALHDAALAAGADAAAVQVLGASAWEQAAQGAPLALQERAPDDVASLFYTSGT TGRPKGVMQTHRNLLAMTMAYFTDVDDVQPGDAMVYAAPMSHGAGLYNYAHMLRGARH VVPASGGFDPAELVQLAADVGRLSLFAAPTMVHRLVEHVRRTGANVDGFKTIVYGGGP MYVDDLRRAIDTMGQKFVQIYGQGESPMTITALAREHLADTAHPRWAERIASVGVAHA CVQVRVVDDEDRPVPTGELGEVVVRGDTVMAGYWRNPEASAQTLRGGWLHTGDVGSLD AHGFLTLRDRSKDVIISGGSNIYPREVEEVLLLHPRVSEVAVVGQHDADWGEVVVAFL VAGEGGAVDDAALHAKLDAELDAELDAELDAELDALCLDHIARFKRPKAYRWVPALPK NSYGKVLKTELRAWLQAEGAGSGA" gene 654284..654946 /locus_tag="Dtpsy_0633" /db_xref="GeneID:7383007" CDS 654284..654946 /locus_tag="Dtpsy_0633" /note="PFAM: DSBA oxidoreductase; KEGG: ajs:Ajs_0654 DsbA oxidoreductase" /codon_start=1 /inference="protein motif:PFAM:PF01323" /transl_table=11 /product="DSBA oxidoreductase" /protein_id="YP_002552113.1" /db_xref="InterPro:IPR001853" /db_xref="GI:222109849" /db_xref="GeneID:7383007" /translation="MNQPVSLKIDFVSDVSCPWCAIGLHALEQAAKRLDGEVALDLHF QPFELNPQMGLEGQDIGEHLQQKYGATPEQSQQNREAIAARGAQLGFTFNMDRRGRIY NTFDAHRLLHWLEEEGTPEQRGALKHALFTAYFTQGENPGDHGVLLRLVAQLGLDEAR ARAVLASQEYAEAVREREAFYQGHGIHSVPAVIINDRHLIQGGQPVEVFEQALRQIAQ QA" gene complement(655015..655521) /locus_tag="Dtpsy_0634" /db_xref="GeneID:7383008" CDS complement(655015..655521) /locus_tag="Dtpsy_0634" /note="PFAM: CreA family protein; KEGG: ajs:Ajs_0655 CreA family protein" /codon_start=1 /inference="protein motif:PFAM:PF05981" /transl_table=11 /product="CreA family protein" /protein_id="YP_002552114.1" /db_xref="InterPro:IPR010292" /db_xref="GI:222109850" /db_xref="GeneID:7383008" /translation="MNARGGLRAGMASLALLACALGLAAGPAAAQAEKIGTVDTAFQW IGRDHDIIVEAYDDPAVQGVTCYVSRARTGGIKGTLGLAEDRAEASIACRQVGPITFV QPLKAQQEVFSERMSILFKRLRVVRMVDAKRNTLVYLTYSEKLIDGSPQNSVTAVPVD RATPIPLR" sig_peptide complement(655429..655521) /locus_tag="Dtpsy_0634" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.874 at residue 31" gene complement(655518..658103) /locus_tag="Dtpsy_0635" /db_xref="GeneID:7383009" CDS complement(655518..658103) /locus_tag="Dtpsy_0635" /note="TIGRFAM: cyanophycin synthetase; PFAM: phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; RimK domain protein ATP-grasp; KEGG: ajs:Ajs_0656 cyanophycin synthetase" /codon_start=1 /inference="protein motif:TFAM:TIGR02068" /transl_table=11 /product="cyanophycin synthetase" /protein_id="YP_002552115.1" /db_xref="InterPro:IPR000115" /db_xref="InterPro:IPR003135" /db_xref="InterPro:IPR004101" /db_xref="InterPro:IPR011761" /db_xref="InterPro:IPR011810" /db_xref="InterPro:IPR013221" /db_xref="InterPro:IPR013651" /db_xref="GI:222109851" /db_xref="GeneID:7383009" /translation="MQITRIRALRGPNLWSRNTAIEAVVHCEPQECGYADIAGFEDRL RARFPKIGALQPHGADQRLSLAHVLEVAALSLQAQAGCPVTFSRTHATLEEGTYQVVV EYTEEAVGRLAMEHAGALLQSALADTPFDADAVVAELRELDEDERIGPSTGSIVDAAV ARGIPFRRLTSGSLVQLGWGSKARRIQAAELDTTSAVAESIAQDKDLTKRLLHAAGVP VPLGRPVADVEDAWVVAQEVGLPVVVKPQDGNQGKGVVVNITTREGLEAAYKTAREFG DEIMVERFLPGHDFRLLVVGHQLVAAARREPPQVLGDGQHTIRELVDIVNQDPRRGSG HGTALTKVRLDDIAIARIASEGLTPDSVPVQGQRVVLRNNANLSTGGSATDVTDDVHP EIAARAIEAAQTIGLHICGVDVVCETMLKPLEEQNGGIVEVNAAPGLRMHLAPSFGKP RNVGVPMVDELFAPGQDGRIPLVAVTGTNGKTTTTRLIGQLFAAHGLRVGMTNTDGVY VNGRQIDSGDCSGPKSARNVLFHPEVDAAVLECARGGILREGLGFDRCQVAVVTNVGA GDHLGLNFITTVEDVAVLKRVIVQNVAADGYGVLNAADPHVAAMASVCPGKVIFFAVD RHHPLMATHRAQGNRVVYVDGDSIVAAEGSWRETISLREIPITRGGTIGFQVENVMAA IGAAWGVGLPWQTIRRGLAGFMNDSDNAPGRFNVMDYRGATVIADYGHNPDAMRALVQ AVQAMPARQRSVVISGAGDRRDQDIVEQTQILGQAFDDVVLYQDACQRGRADGEVLAL LRQGLQGAPRTRYVTEIHGEFIAIDHALERLQPGDLCLVLVDQVEEALAHLAQRCSEA SAVAP" gene complement(658198..660369) /locus_tag="Dtpsy_0636" /db_xref="GeneID:7383010" CDS complement(658198..660369) /locus_tag="Dtpsy_0636" /note="TIGRFAM: cyanophycin synthetase; PFAM: phosphoribosylglycinamide synthetase; RimK domain protein ATP-grasp; KEGG: ajs:Ajs_0657 cyanophycin synthetase" /codon_start=1 /inference="protein motif:TFAM:TIGR02068" /transl_table=11 /product="cyanophycin synthetase" /protein_id="YP_002552116.1" /db_xref="InterPro:IPR000115" /db_xref="InterPro:IPR011761" /db_xref="InterPro:IPR011810" /db_xref="InterPro:IPR013651" /db_xref="GI:222109852" /db_xref="GeneID:7383010" /translation="MAKFNDIQLLRTTYLRGPSVWTYRPVLEVWLDLGELEDYPSNKI PGLNERLTTWLPDLVEHHCGVGERGGFLLRLKEGTWMGHVLEHVVIELLNLSGMPAEF GQTREISRRGVYRMVFRCPEEAVARVALEHGHRLLMAAINDEAFDLKAAIHAIKTAIN DRYLGPSTGCIVDAASARRIPHIRLNDGNLVQLGYGAAQRRIWTAESDQTSAIAEGIA QDKDFTKRLLASCGVPVPEGQIVRNADEAWEVAQEIGFPVTVKPSDGNHARGVTLELS READIKAAFALAEPEGSDVIVEKFIDGVEHRLLVVGGKVVAATKGETVSVHGNGQSTL RELVAVLNEDPRRGPEQEYPLDWIDVEKGAVQLELKRQGVTPDTVVPSGQAILLQRNG NMAIDCTDDVHPDVAYYAQLAAKIVGLDIAGMDMILQDVSKPMKEQGGAILEVNAGPG LLMHLKPTSGAPRPVGQAIVEHLFPVTDEGTGAGRIPIVGIAGTRHNAFTARFVGWLL QLSGKLTGVASSEGMFLNNRRTQKSATAHWAGAHRLLTNRLAQAAVIQTTARSILEEG LAYDRCLVGVVTDMDGFETLADHDVLEQAQMTRVLRTQIDVVLDEGAGVLNADIEQVA DLARLCDGEVLLYSLSPDNPFVAAHRAEGEGRAVFVRGEQVVLATGASERVLGTLDAL SLPGGHRPDTAAMLAAIAAAWSMDIGPDLIAAGIKTFDYAA" gene 660621..662933 /locus_tag="Dtpsy_0637" /db_xref="GeneID:7383011" CDS 660621..662933 /locus_tag="Dtpsy_0637" /note="PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_0658 ABC transporter related" /codon_start=1 /inference="protein motif:PFAM:PF00005" /transl_table=11 /product="ABC transporter related" /protein_id="YP_002552117.1" /db_xref="InterPro:IPR001140" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR017871" /db_xref="InterPro:IPR017940" /db_xref="GI:222109853" /db_xref="GeneID:7383011" /translation="MQHHHSVDASGVLSGPWGAEMRAVLAPDENVQAAFEVDLTPDLR FAPGLLVLTERRLLARAGDAPAQEWPLAPGMALRLLDHGGVGTVELHDADRRLALWRF TLGRHPQALHLQQRLDAQVQRLDSLQGAIAPEAQDVPRCAVCGTPLPPDSDECTACAR QQAPQTSTWVLLRLWRFARPYKKQLAAGFALTLASTAASLVPPYMTIPLMDDILIPYQ SGQQIPAGMVLLYLGGLLLAALLAWALGWARTYILALVSERIGADLRTTTYEHLMRLS LDYFGSKRTGDLMARIGSETDRINVFLSLNALDFATDVLMIVMTAAILFSINPWLALV TLVPLPFIAWLIHTVRDKLRTGFEKIDRVWSEVTNVLADTIPGIRVVKAFAQEKREAD RFRAANQHNLEVNDKLNKTWSLFSPTVSLMTEVGLLVVWGFGIWLVARNQITVGVLAA FIAYIGRFYIRLDSMSRIVSVTQKAAAGAKRIFDILDHVSNVPDPVNPVKVDRVQGAI EMRDVGFRYGSRTVIKNLSLTIRPGEMIGLVGHSGSGKSTLVNLISRFYDVSDGAILV DDVDIRRMAVADFRRHIGLVLQEPFLFFGTIAENIAYGKPDATREEIVAAARAAHAHE FILRLPHGYDSLVGERGQGLSGGERQRISIARALLIDPRILILDEATSAVDTETEKEI QKALDNLVQGRTTIAIAHRLSTLRKADRLVVMDRGEVVEVGPHDELMEKQGAYWRLYE AQARRAEEDAQAAGVRIEVREHSAHPAGNT" gene 662950..663456 /locus_tag="Dtpsy_0638" /db_xref="GeneID:7383012" CDS 662950..663456 /locus_tag="Dtpsy_0638" /note="PFAM: Domain of unknown function DUF1854; KEGG: ajs:Ajs_0659 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF08909" /transl_table=11 /product="Domain of unknown function DUF1854" /protein_id="YP_002552118.1" /db_xref="InterPro:IPR015005" /db_xref="GI:222109854" /db_xref="GeneID:7383012" /translation="MTLHTSPSTASALAAGWDLHRNPHGRLVLRAADGTAHVGVTPVR AFPIAAPGEGLSLVGPDGHELAWVPRLEQLAPAVRALVEEELAAREFVPTITRIRSVS SFSTPSTWEVDTDRGATQLVLKGEEDIRRLEGRTKLLIAASDGLQFHVPDVTALDRAS RKLLERFL" gene 663652..664092 /locus_tag="Dtpsy_0639" /db_xref="GeneID:7383013" CDS 663652..664092 /locus_tag="Dtpsy_0639" /note="KEGG: ajs:Ajs_0660 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0660" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002552119.1" /db_xref="GI:222109855" /db_xref="GeneID:7383013" /translation="MQLPPVDRSPAQWRTTGADLYSTGASGAVAVRPVNAANPVESTD RLGEGASLREPTKPSAPDENNRDWTLAEAKKEAPKEPEEPPKEPIYKQLLEFIQSMWR ASGSAVELAQDINKNTLQERLAQQVQDRQSLTYSDPKVKRTGGL" gene complement(664193..664570) /locus_tag="Dtpsy_0640" /db_xref="GeneID:7383014" CDS complement(664193..664570) /locus_tag="Dtpsy_0640" /note="PFAM: Calcium-binding EF-hand-containing protein; KEGG: ajs:Ajs_0661 signal transduction protein" /codon_start=1 /inference="protein motif:PFAM:PF00036" /transl_table=11 /product="putative signal transduction protein with EFhand domain" /protein_id="YP_002552120.1" /db_xref="InterPro:IPR002048" /db_xref="GI:222109856" /db_xref="GeneID:7383014" /translation="MLPSRSFRPFTRLLTAPAACAWLMACALAAPLAAQAQGVAHANA PRHSASAPLTKGEIKAIRQFEMLDFNGDGKLSRAEVAIVPKVAAAFDDADTNRDNYVT LDEVRAFAIKYRAERDGARAAAR" sig_peptide complement(664460..664570) /locus_tag="Dtpsy_0640" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.926 at residue 37" gene complement(664602..665543) /locus_tag="Dtpsy_0641" /db_xref="GeneID:7383015" CDS complement(664602..665543) /locus_tag="Dtpsy_0641" /EC_number="3.1.3.5" /note="PFAM: 5-nucleotidase; KEGG: ajs:Ajs_0662 5-nucleotidase" /codon_start=1 /inference="protein motif:PRIAM:3.1.3.5" /transl_table=11 /product="5'-nucleotidase" /protein_id="YP_002552121.1" /db_xref="InterPro:IPR010394" /db_xref="GI:222109857" /db_xref="GeneID:7383015" /translation="MSATLQDKLVVAISSRALFDFEEENRLFEAGDEQAYMRRQLELV HEPARPGIAFPLVRKLLAFNTPDAARVEVVMLSRNDPASGMRVFASAKAAGMRIERGV FTRGRNPFSYLRPLGAHLFLSANETDVREALSIGFPAARVMIDSTPAGDRYPREVRIA FDGDAVLFSDEAERVYQQGGLPAFLQHEVSHAATPLAEGPFKPLLAALHRLQQQADAS QMRIRTALVTARSAPAHERAIRTLLDWGITVDEAMFLGGLEKGPFLREFEPDFFFDDQ TGHVASAARHVPAGHVSSGIANTAAALQGDTARPPRR" gene complement(665540..666769) /locus_tag="Dtpsy_0642" /db_xref="GeneID:7383016" CDS complement(665540..666769) /locus_tag="Dtpsy_0642" /note="TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; KEGG: ajs:Ajs_0663 general secretion pathway protein F" /codon_start=1 /inference="protein motif:TFAM:TIGR02120" /transl_table=11 /product="general secretion pathway protein F" /protein_id="YP_002552122.1" /db_xref="InterPro:IPR001992" /db_xref="InterPro:IPR003004" /db_xref="InterPro:IPR011850" /db_xref="GI:222109858" /db_xref="GeneID:7383016" /translation="MPAYSFEALDAQGHVRRGTLEADSPKAARSLLRAQALVPLDVEA LAAGTAPGTPPTLAQRLFTRPVFNATGLGVWTRQLAGLVGSGLPLERALTALAEEADD ERQRHLLAALRAEVNAGSTFARALAQHPREFSDIYCAVIGAGESSGGLAEVLDSLADD LEQRQALRAKLIGAALYPAIVTVIAIVIVLFLVGYVVPQVASVFAGTKRALPFLTVAM LALSDVVRNYGWALLGGLVLLAFGARAALAQPRLREKFDAAWLRLPLVGKLARGYNAA RFAGTLAMLAGAGVPILKALQAAAETLNNRALRADALDALVLVREGAPLASALAQKKR FPGLVAMFARLGEQTGQLPTMLQRAATQLGTEVQRRAMQLATVLEPLLIVAMGGIVML IVLAVLMPIIQLNQFVK" gene complement(666831..667862) /locus_tag="Dtpsy_0643" /db_xref="GeneID:7383017" CDS complement(666831..667862) /locus_tag="Dtpsy_0643" /note="TIGRFAM: Luciferase-like monooxygenase; PFAM: Luciferase-like monooxygenase; KEGG: ajs:Ajs_0664 luciferase family protein" /codon_start=1 /inference="protein motif:TFAM:TIGR03558" /transl_table=11 /product="Luciferase-like monooxygenase" /protein_id="YP_002552123.1" /db_xref="InterPro:IPR016048" /db_xref="GI:222109859" /db_xref="GeneID:7383017" /translation="MTAHSLPLLSMLDLVAVREGGTVAQALQIAVQTAQHVEALGFKR YWLAEHHNMPGIASSATAVLVGHVAGATRSIRVGSGGIMLPNHAPLVVAEAFGTLAEL YPGRIDLGLGRAPGTDGATMRALRRDRVETEADFPRDVAELQQLLAPAQPGQRIIAVP GAGTQVPLWLLGSSLFSAQLAAQMGLPYAFASHFAPRMLHAAIDIYRRLFRPSPACAK PYVVIGVPVIAAPSDEEAQYLASSTYQRVLGILTGQRGLLQPPVEGYLQSLAPQERAA VADFLAVGVVGGPQTVREGLQALLAATQADEFMLVSDVYDPALRLRSLEITAQAHAAL SPAAATMAG" gene 668059..668583 /locus_tag="Dtpsy_0644" /db_xref="GeneID:7383018" CDS 668059..668583 /locus_tag="Dtpsy_0644" /note="KEGG: ajs:Ajs_0665 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0665" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002552124.1" /db_xref="GI:222109860" /db_xref="GeneID:7383018" /translation="MGFFSRLFQPRADGLAAPEDWTSLPASEASALVLYDEEASRLLA AFDIEAAIVMHERWLPWLAQALAGARDEQLRPETVVNDTCSELGRWLHGSGRVALGHF PAFDMLMRRHQYFHHQAAVLLTHLAQGDQLRAEQAFKSCQHASRQVVLLLKELQRGLD HGKRSPQPMAAGER" gene complement(668714..670102) /locus_tag="Dtpsy_0645" /db_xref="GeneID:7383019" CDS complement(668714..670102) /locus_tag="Dtpsy_0645" /note="KEGG: ajs:Ajs_0666 general secretory pathway protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase" /codon_start=1 /inference="protein motif:TFAM:TIGR02533" /transl_table=11 /product="general secretory pathway protein E" /protein_id="YP_002552125.1" /db_xref="InterPro:IPR001482" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR013369" /db_xref="GI:222109861" /db_xref="GeneID:7383019" /translation="MRHPLPYAFARSSQLLLEDDGQQLVLWHGPQPDAGALSEVLRKH AVHQFMPLDAPTLAQRISAAYSQSESSAATVVSEVEEGADLSRMMQELPAVEDLLESA GDAPIIRMLNALLTQAVRDGASDIHIEPYERHSSVRFRVDGTLREVVQPNRALHAALI SRLKIMADLDISEKRLPQDGRISLRLGTRAVDVRVSTLPNAHGERAVLRLLDKSESKL NLEAVGMQGEVLARLAHLIQQPHGIILVTGPTGSGKTTTLYAALARLDAARSNIMTVE DPIEYELPGVGQTQVNAKIDLTFAKALRAILRQDPDVIMIGEIRDFETAQIAIQASLT GHLVLATLHTNDAASAITRLTDMGVEPFLLSSSLLGVLAQRLVRKYCGECHGAGCEHC GHTGYAGRTGVFELLVVDDAIRAQIHNQAPEAEVRTQALAGGMTLMRDDGERLIHAGI TSREEVLRVTRD" gene complement(670114..672459) /locus_tag="Dtpsy_0646" /db_xref="GeneID:7384389" CDS complement(670114..672459) /locus_tag="Dtpsy_0646" /note="TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: ajs:Ajs_0667 general secretion pathway protein D" /codon_start=1 /inference="protein motif:TFAM:TIGR02517" /transl_table=11 /product="general secretion pathway protein D" /protein_id="YP_002552126.1" /db_xref="InterPro:IPR001775" /db_xref="InterPro:IPR001854" /db_xref="InterPro:IPR004846" /db_xref="InterPro:IPR005644" /db_xref="InterPro:IPR013356" /db_xref="GI:222109862" /db_xref="GeneID:7384389" /translation="MTNLPRHPLRFTLHLIAASALLTGVSSQIHAQTSGQRAGSVRPS EPVTLNFANADIEAVARTMATITGKNVVVDPRVKGQITLVTENAVQPNAAFQQFLAAL RLQGFTVVESAGLYKVVPEADAKLQTGNVSVSQGGAGGTPAGGQIVTQIFKLNFENAA NLVPVLRPLISPNNTINVNPGNNSLVITDYADNLQRLARIVAAMDVSNASDVEVIPLQ HAIATDLAPLVSRLIEGGSATATGTAQGVAQGQTDNSFKTTLLAEPRSNALIVRAANP ARVALVRSLVAKLDQPAAPGSSAASGNIHVVYLKNADAVKLATTLRAALGSAGGSGTS SSGGTGTGNLSGGLTRTGASGLGQTSGLGNSTNASGNAGGLGSSGLGTGQGSSGSSDA NQPSTGGIIQADPTTNSLIISAPEPLYRQIRAVIDKLDGRRAQVLIESLIVEVSANKV AEFGIQWQGVLGNYGSTLGVLGNNSSVAGRNILDLALAAATGNVTSIASAKPAAGMNL AVAPRINGKYYLGALANFLENTGDANVLSTPNLLTLDNEEAQIIIGNNVPFVTGSYAN TGGSGGAVNPFTTVERKDVGLMLRVRPQINENGTVKLTMYQEVSKVAESTLSNANGPS TSKRSIESTVLVDDGSVIVIGGLLEDNYALNQDKVPVMGDLPVVGGLFRNEKRTRQKT NLMVFLRPMVIRDSAASDALMVDRYEAIRALQHSTQPAPSTMMSGVSEAPVLPPLPAP ASSAAPVQPAAAAAPLAPLAPQPPARTATPPSMGQSPYSPQ" sig_peptide complement(672364..672459) /locus_tag="Dtpsy_0646" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 1.000 at residue 32" gene complement(672464..673276) /locus_tag="Dtpsy_0647" /db_xref="GeneID:7384152" CDS complement(672464..673276) /locus_tag="Dtpsy_0647" /note="KEGG: ajs:Ajs_0668 putative general secretory pathway N transmembrane protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0668" /transl_table=11 /product="putative general secretory pathway N transmembrane protein" /protein_id="YP_002552127.1" /db_xref="GI:222109863" /db_xref="GeneID:7384152" /translation="MPRSLRPTPSLTLPRAPWRWAVAGVCLGALPALVLWAPARWLAT GVQQASGGQLQLQQARGTVWNGSARLVLTGGADSQDQAALPGRLQWQLRPAWNGLSAR LTADCCIPATAPLQVRVAMGLGAVRAQVADGQSQWPAAALAGLGTPWNTVQPQGRLQL RTQAFALQWAAGRLQMQGQVQLDALGLSSRLSTLRPMGSYRLQVQGGGAPTLQLSTLE GALLLSGNGQWVGKRLRFTGEASAAPGREAALANLLNIIGRRSGARSIITVG" sig_peptide complement(673172..673276) /locus_tag="Dtpsy_0647" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.770) with cleavage site probability 0.376 at residue 35" gene complement(673293..673838) /locus_tag="Dtpsy_0648" /db_xref="GeneID:7384153" CDS complement(673293..673838) /locus_tag="Dtpsy_0648" /note="KEGG: ajs:Ajs_0669 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0669" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002552128.1" /db_xref="GI:222109864" /db_xref="GeneID:7384153" /translation="MNTRPASTSPAPVPPALAALRAHWARMAPREQSLVLAAAAVVGL ALLWWVLLAPALQQLRGSGARHAAVDAQLQRMQALQAEALQLKDAPRPPGGEALRTLQ TTLTQQLGAAAQMNVAGDRATVTLKGAPAEALAQWLNQARSTARAVPLEARLVHSAAP ANAAAGAVRWDGTLVLALPPQ" sig_peptide complement(673782..673838) /locus_tag="Dtpsy_0648" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.812) with cleavage site probability 0.794 at residue 19" gene complement(673835..675064) /locus_tag="Dtpsy_0649" /db_xref="GeneID:7384154" CDS complement(673835..675064) /locus_tag="Dtpsy_0649" /note="PFAM: General secretion pathway L; KEGG: ajs:Ajs_0670 general secretion pathway L" /codon_start=1 /inference="protein motif:PFAM:PF05134" /transl_table=11 /product="General secretion pathway L" /protein_id="YP_002552129.1" /db_xref="InterPro:IPR007812" /db_xref="GI:222109865" /db_xref="GeneID:7384154" /translation="MSTLVLTLPLGTPGPAAEYSYTLTADGHTATRHASTTAALLPDP GRAGEIVAVVPARALSWQQVTLPQGATAQAGRLRAVLEGLLEEHLLDDPAQLHFALQP GAQPGSPAWVAVCDRAWLRGALQALEAAGRPVDRVVPEFSPGPTASGQEECDVLGTPE DAQLVLTGHGPQQAVAVLPLAAAAALAARPADDAPPAVRAEPAVAALAERLLNRPVQL HTASQRALVAARGEWDLAQFDLASTGHTRALRKLGSGASAFARAPQWRAARWALAVAV VVQVVGLNLWAWQDRQALAAKQAGVRNALTQTFPHVKVVVDAPVQMERELAQLRQAAG SVSRRDLEPLMAAAGAALPPPRVPTQIEYANGELRLRGLELAPEELTAMNQRLAAESL SAQPRDGALLVRAEDRP" gene complement(675124..676071) /locus_tag="Dtpsy_0650" /db_xref="GeneID:7384155" CDS complement(675124..676071) /locus_tag="Dtpsy_0650" /note="KEGG: ajs:Ajs_0671 general secretion pathway protein K" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0671" /transl_table=11 /product="general secretion pathway protein K" /protein_id="YP_002552130.1" /db_xref="GI:222109866" /db_xref="GeneID:7384155" /translation="MLTVTLVATFAAAAMWQQWRAIEVETAERARIQSAWILIGALDW SRLILREDSIARSGDGTDNLSEPWSVPLEEARLSTFLAADRNVAQVEDASTDTTNAFL SGQITDLQALLNLRNLANEGQVDATALRQFQRLFEYLGLPRAQLDMLARQMLRAEAKD SDSASAAPLLPQSVAQLGWWGLPQRSVDALAPYVTLLPVRTKVNLNTASAVVLWASAD GLDMAEAQHLVQARDSNHFRSEVDAAKLLGNSSRISATVHTVSSSYFEVRGRLRLDMA VVEERSLVYKQRGDVRTLWRERGGLVRTTAPGTAAAGAR" gene complement(676254..676931) /locus_tag="Dtpsy_0651" /db_xref="GeneID:7384156" CDS complement(676254..676931) /locus_tag="Dtpsy_0651" /note="KEGG: ajs:Ajs_0672 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0672" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002552131.1" /db_xref="InterPro:IPR001120" /db_xref="InterPro:IPR012902" /db_xref="GI:222109867" /db_xref="GeneID:7384156" /translation="MQAARGFTLVELLVAIAVMALLAIASWRGLDGMARSQQLTRERT DELLVLQTVLAQWAADLDALQAIDHTEPIAWDGQVLRLTRRGTRQPDEGALVVAWARR SVDGTARWLRWQSPPVRTRAEWNAAWQRAAQWARTPGEAERRQETVLMPLANWQLYYY RSGAWANALSTDTSASAPRTVGGLSSAAASIPEGVRLQLTLPPGGALSGVVTRDWANP LLGGGKS" gene complement(677083..677481) /locus_tag="Dtpsy_0652" /db_xref="GeneID:7384157" CDS complement(677083..677481) /locus_tag="Dtpsy_0652" /note="TIGRFAM: general secretion pathway protein I; PFAM: type II secretion system protein I/J; KEGG: ajs:Ajs_0673 general secretion pathway protein I" /codon_start=1 /inference="protein motif:TFAM:TIGR01707" /transl_table=11 /product="general secretion pathway protein I" /protein_id="YP_002552132.1" /db_xref="InterPro:IPR001120" /db_xref="InterPro:IPR003413" /db_xref="InterPro:IPR010052" /db_xref="InterPro:IPR012902" /db_xref="GI:222109868" /db_xref="GeneID:7384157" /translation="MSHRARTGTGARRRHGAARGFTLVEVLVALGIVAIALMAGLQAT SALTRNAARQTNVVLAHLCAENELSRVRLSSQMPSIGDTRVACEQAGRRYDVAVTVSP TPNPQFRRVDAQVFEATLPVLRLSTIVGRY" gene complement(677478..678026) /locus_tag="Dtpsy_0653" /db_xref="GeneID:7384158" CDS complement(677478..678026) /locus_tag="Dtpsy_0653" /note="TIGRFAM: general secretion pathway protein H; KEGG: ajs:Ajs_0674 general secretion pathway protein H" /codon_start=1 /inference="protein motif:TFAM:TIGR01708" /transl_table=11 /product="general secretion pathway protein H" /protein_id="YP_002552133.1" /db_xref="InterPro:IPR010053" /db_xref="InterPro:IPR012902" /db_xref="GI:222109869" /db_xref="GeneID:7384158" /translation="MTRVHPSPADAAQGPRPAAPLRRAGFFSPRPLRSRRDRQSRAAV AQRGFTILELLVVISIIALATAGVGLALRDSGATQLQREGERLAALLESARAQSRASG AAVRWRADAQGFRFEGVPPDTLPNRWLDSATGVQGPAELWLGPEPLIGPQQVVIVSGA HPDRAVRVATDGLRPFAVQALP" gene complement(678060..678539) /locus_tag="Dtpsy_0654" /db_xref="GeneID:7384159" CDS complement(678060..678539) /locus_tag="Dtpsy_0654" /note="TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: ajs:Ajs_0675 general secretion pathway protein G" /codon_start=1 /inference="protein motif:TFAM:TIGR01710" /transl_table=11 /product="general secretion pathway protein G" /protein_id="YP_002552134.1" /db_xref="InterPro:IPR000983" /db_xref="InterPro:IPR001120" /db_xref="InterPro:IPR002416" /db_xref="InterPro:IPR010054" /db_xref="InterPro:IPR012902" /db_xref="InterPro:IPR013545" /db_xref="GI:222109870" /db_xref="GeneID:7384159" /translation="MSIPSRRFEMQPSPSSLAQRARRRLSAGFTLIELMVVLVIIGVL AALIVPNVLDRADDARSTAARTDVTNIMQALKLYRLDNQRYPTAEQGLQALIAKPSAG PVPNNWRPYLEKLPNDPWGRPYQYLSPGIKGEVDVMSFGADGQSGGEGKDADIGSWQ" gene 678563..679012 /locus_tag="Dtpsy_0655" /db_xref="GeneID:7384160" CDS 678563..679012 /locus_tag="Dtpsy_0655" /note="KEGG: ajs:Ajs_0676 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0676" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002552135.1" /db_xref="GI:222109871" /db_xref="GeneID:7384160" /translation="MVTNTYGRWAPRLATLLLWALAGATAVYWGLKLSASPAGTAPAA AAPEPVVTDTQALARLLGASPVLAAAEAAPSAASRFVLMGVLAGTASGGGAALIAVDG KPAKPYRVGANVEPGLVLQSLGKGAARLGASMDGATTLALEMPRKRP" sig_peptide 678563..678670 /locus_tag="Dtpsy_0655" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.751) with cleavage site probability 0.311 at residue 36" gene complement(679070..679681) /locus_tag="Dtpsy_0656" /db_xref="GeneID:7384161" CDS complement(679070..679681) /locus_tag="Dtpsy_0656" /note="PFAM: Phosphoglycerate mutase; KEGG: ajs:Ajs_0677 phosphoglycerate mutase" /codon_start=1 /inference="protein motif:PFAM:PF00300" /transl_table=11 /product="Phosphoglycerate mutase" /protein_id="YP_002552136.1" /db_xref="InterPro:IPR013078" /db_xref="GI:222109872" /db_xref="GeneID:7384161" /translation="MSAPRLWLVRHARPEVAPGLCYGRLDVAANVRHSRESARLLAQA LPPRLAALHHSPLQRCELLAQDLLAVRADLASKAEPRITEMDFGQWEGRAWNDIARAD IDAWTTRFGHHAPGGGEPLAAMLTRVSAALDEAAAQAHAGGGDVVWITHAGVARCVHW LLTHGAARMPMSHEWPQSAPGYGAWTTVLLPLKGRPQAAPARG" gene complement(679678..680490) /locus_tag="Dtpsy_0657" /db_xref="GeneID:7384162" CDS complement(679678..680490) /locus_tag="Dtpsy_0657" /note="PFAM: cobalamin-5-phosphate synthase CobS; KEGG: ajs:Ajs_0678 cobalamin-5'-phosphate synthase" /codon_start=1 /inference="protein motif:PFAM:PF02654" /transl_table=11 /product="cobalamin-5-phosphate synthase CobS" /protein_id="YP_002552137.1" /db_xref="InterPro:IPR003805" /db_xref="GI:222109873" /db_xref="GeneID:7384162" /translation="MQTLRHYLLAVQFFTRIPVTGRLATWVGYSPAMLRASSAHFPGV GWLVAAVAVGSYAALWLGLGGAGFAPLAAAVGCTIATVLVTGGFHEDGLADVADGLGG AYQPERALEIMKDSRIGAFGAMALVLALLAKVALLAQLGHLGLSSALAALAGGHVLSR LWPLVIVRALPHVGDTATSKSKPLADQISVRALAAAALWCFPALALVYQALGASVLIA SLLASAAGAAWMLWRFARRLQGFTGDCLGATQQVGEIGFYLGAAIALAQRAA" gene complement(680557..682119) /locus_tag="Dtpsy_0658" /db_xref="GeneID:7384163" CDS complement(680557..682119) /locus_tag="Dtpsy_0658" /note="TIGRFAM: threonine dehydratase, biosynthetic; PFAM: Threonine dehydratase domain protein; Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: ajs:Ajs_0679 threonine dehydratase" /codon_start=1 /inference="protein motif:TFAM:TIGR01124" /transl_table=11 /product="threonine dehydratase, biosynthetic" /protein_id="YP_002552138.1" /db_xref="InterPro:IPR000634" /db_xref="InterPro:IPR001721" /db_xref="InterPro:IPR001926" /db_xref="InterPro:IPR002173" /db_xref="InterPro:IPR005787" /db_xref="GI:222109874" /db_xref="GeneID:7384163" /translation="MTQPLTPFDYLTKILTARVYDVAVESDLQPARALSRRLHNKVLL KREDQQPVFSFKLRGAYNKMAQLSPEQLARGVICASAGNHAQGVAMSASKLGTRAVIV MPTTTPQLKIDAVKTLGGEVVLSGESYSDAYEHAAQLQKEEGLTFVHPFDDPDVIAGQ GTIAMEILRQVQQLGGKLDAVFVAIGGGGLIAGVSNYIKAVCPGIKVIGVQMNDSDAM AQSVKAHQRVTLPDVGLFSDGTAVKLVGEETFRVAQNLVDDYVIVDTDAVCAAIKDIF VDTRSIVEPAGALAVAAIKQYVAKHKTKGETYAAILCGANMNFDRLRFVAERAEVGEE REALFAVTIPEERGSFKRFCEVVGALPGGPRNVTEFNYRISHERRAHVFVGLSTTGRG ESEKIARNFHKHGFEALDLTHDELAKEHLRHLVGGHSALARDERLMRFTFPERPGALF KFLSLMQPTWNISLFHYRNQGADYGRILVGMQVPADDAAQFDAFLQTLGYPYVEETQN PAYRLFLQANGA" gene 682442..682891 /locus_tag="Dtpsy_0659" /db_xref="GeneID:7384164" CDS 682442..682891 /locus_tag="Dtpsy_0659" /note="PFAM: OsmC family protein; KEGG: ajs:Ajs_0680 OsmC family protein" /codon_start=1 /inference="protein motif:PFAM:PF02566" /transl_table=11 /product="OsmC family protein" /protein_id="YP_002552139.1" /db_xref="InterPro:IPR003718" /db_xref="GI:222109875" /db_xref="GeneID:7384164" /translation="MECTVSWTGNAGTRSGMGFVAETGSGHVLAMDGAPDADRPENGG QNLAPRPMETVLAGTGGCTAYDVVLILKRGRHDVRGCSVKLTSERAQVDPKVFTKIHM QFTVTGRGIPPAAVERAIAMSHEKYCSASIMLGKTAQITTGFEIVEA" gene complement(682908..683525) /locus_tag="Dtpsy_0660" /db_xref="GeneID:7384165" CDS complement(682908..683525) /locus_tag="Dtpsy_0660" /note="KEGG: ajs:Ajs_0681 putative ubiquinone biosynthesis protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0681" /transl_table=11 /product="putative ubiquinone biosynthesis protein" /protein_id="YP_002552140.1" /db_xref="GI:222109876" /db_xref="GeneID:7384165" /translation="MDTLLIAADSALRTLFARPRAGEPSPARSLPAVDLSVEQRRLSS ALMRVNHVGEVCAQGLYMAQSCVTRDPQLRSDLLAAAREETDHLAWTRERLDALGSRP SLLNPLWFAGAFAIGLVAARVSDQASLGFVVETERQVSAHLQGHLRRLPEADLPSRAI VDRMQRDEERHAAQAQAAGALPLPPPARWLMKAAAKVMTTTAHHI" gene 683837..684925 /locus_tag="Dtpsy_0661" /db_xref="GeneID:7384166" CDS 683837..684925 /locus_tag="Dtpsy_0661" /note="PFAM: porin Gram-negative type; KEGG: ajs:Ajs_0682 porin" /codon_start=1 /inference="protein motif:PFAM:PF00267" /transl_table=11 /product="porin Gram-negative type" /protein_id="YP_002552141.1" /db_xref="InterPro:IPR001702" /db_xref="InterPro:IPR002299" /db_xref="GI:222109877" /db_xref="GeneID:7384166" /translation="MKKSLIALAVLAASGAAMAQSSVTLFGVVDTAFGYVDNANAAGD SVYGLSTSGNATSRLGFRGVEDLGGGLKAGFWLEGEIFGDNGNAAGFNFQRRSTVSLA GGFGEVRLGRDYTPGYTKFISYDVFGQVGIGQFMGWSNWNGNNQTTANNNNDANGIRS SNLISYFTPNFSGFTAGLGYGFDEKADKTNSKKGRYVGGYVAYDNGPLSVALSYDESS ALTLGSGATAVNGADRNRLTLGGSYNLNVVKLNAILQQTKDDVPGGSERKVNAYMLGA SAPVGAGEVKAQYALYDQKFIDSKAHQISLGYVHNLSKRTALYGTVAYLKNKDASNLG LNAKNLSTGGPGAGENQTGVQLGIRHSF" sig_peptide 683837..683896 /locus_tag="Dtpsy_0661" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.996 at residue 20" gene 685258..686451 /locus_tag="Dtpsy_0662" /db_xref="GeneID:7384167" CDS 685258..686451 /locus_tag="Dtpsy_0662" /note="PFAM: porin Gram-negative type; KEGG: eugene3.77300001;." /codon_start=1 /inference="protein motif:PFAM:PF00267" /transl_table=11 /product="porin Gram-negative type" /protein_id="YP_002552142.1" /db_xref="InterPro:IPR001702" /db_xref="InterPro:IPR002299" /db_xref="GI:222109878" /db_xref="GeneID:7384167" /translation="MQKKIVAALALCGAGVAMAQSAGTSKVELWGIVDAAVRHTNNEG AGKDGLTKMIGGGMSQSRWGINVEEDLGGGSKALVVLENRLNADDGSVSTPFFQLSYL GLQGPYGRLTAGRQWNVLFDVVTSTYASFPYSPYMEAYKPELGMAMGARTSNMLKYTF ATPDRSFVGSLQYSFDENNDTKALEAGLPASAAQVPAYVAGTLGGGAWKTAGGYLRYS ASGFAVGGGYMRTTLPGGTDVDAWTLGGSYRTGPWYFNTGYGLNKAKYATVTNPIQGF RNLVDGAILGQFWAGQTNGGFQPGDANKRQLFKVGVGYQLTPQLNLGAHYFRGKQSGS ATGASNGNVNFYVAVADYAFSKRTDAYFGVDHTSISGGSALVLDAASGARSRTGITVG VRHRF" sig_peptide 685258..685317 /locus_tag="Dtpsy_0662" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.952 at residue 20" gene 686703..688283 /locus_tag="Dtpsy_0663" /db_xref="GeneID:7384168" CDS 686703..688283 /locus_tag="Dtpsy_0663" /note="PFAM: extracellular solute-binding protein family 5; KEGG: ajs:Ajs_0685 extracellular solute-binding protein" /codon_start=1 /inference="protein motif:PFAM:PF00496" /transl_table=11 /product="extracellular solute-binding protein family 5" /protein_id="YP_002552143.1" /db_xref="InterPro:IPR000914" /db_xref="GI:222109879" /db_xref="GeneID:7384168" /translation="MRINALILSLAAACAAAVVPAAHAKTFKWASQGEIATWDIHSQN NALQNAIHSYVYESLVYYNSRTFEVEPMLATAWREVSPTQVRFTLRQGVKFHDGSAFT ADDAVYSLQRAMSKTSNYTPYVQGIDKVVKVDAQTIDIFLKSPNPVLLRQMTELRMMS KAWAEKNRSVEPKDIKGTDENFAHRNAMGTGPYTLETWQPDVKMVFKRNPNWWGQMEG NVTEIVYTPIKSAATRIAALLSGEVDLVLDPSPQDLPRLRSSGTIKVVDGLENRTIFL GMDQFRDELVGSNIKGKNPLKDLRVRKALYQSIDANALTRNILRGLGKPTGTLVAPQV AGWSEAVGKRMPYDVEAAKKLLAEAGYADGFEVDFACPNNRYINDEAICQAVTAMWAR IGVKAKLRTLPLVTYFPMIQRSEASIYMLGWGVPTFDALYSLQSLVRSVGTGGDGNYN VGRYRNERMDYLVDRIKAETDAPVRARMLTEALQLSNDTVSHLPLYDQVIPWAMKKNV ELVHRADNRIDMRTVKLQ" sig_peptide 686703..686777 /locus_tag="Dtpsy_0663" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.995 at residue 25" gene 688433..689416 /locus_tag="Dtpsy_0664" /db_xref="GeneID:7384169" CDS 688433..689416 /locus_tag="Dtpsy_0664" /note="PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_0686 binding-protein-dependent transport systems inner membrane component" /codon_start=1 /inference="protein motif:PFAM:PF00528" /transl_table=11 /product="binding-protein-dependent transport systems inner membrane component" /protein_id="YP_002552144.1" /db_xref="InterPro:IPR000515" /db_xref="GI:222109880" /db_xref="GeneID:7384169" /translation="MLAFILRRLIQAVIVMVAVAFISFMLFQFVGDPVVFLLGQDATP EQITEMRAALGLDQPFIVQFWHFLVNAAQGEFGLSLRQGAKVSRLIAERFPATLELAL VAAFIALAVGMPMGVYAALKRGTFTSQVFMTLSLLGVSLPTFLIGILLILVFSVTLGW FPSFGRGDVTQLGWWSTGLLTAKGWHHITLPAITLAIFQLTLIMRLVRAEMLEVLRTD YIKFARARGLTDRAIHFGHALKNTLVPVMTITGLQLGGLIAFAIITETVFQWPGMGLL FIQAVTFADIPVMAAYLCLIALIFVVINLVVDLLYFAVDPRLRVGGKAGGH" sig_peptide 688433..688525 /locus_tag="Dtpsy_0664" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.898) with cleavage site probability 0.731 at residue 31" gene 689418..690644 /locus_tag="Dtpsy_0665" /db_xref="GeneID:7384170" CDS 689418..690644 /locus_tag="Dtpsy_0665" /EC_number="3.5.1.32" /note="KEGG: ajs:Ajs_0687 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein" /codon_start=1 /inference="protein motif:TFAM:TIGR01891" /transl_table=11 /product="amidohydrolase" /protein_id="YP_002552145.1" /db_xref="InterPro:IPR002933" /db_xref="InterPro:IPR010168" /db_xref="InterPro:IPR011650" /db_xref="GI:222109881" /db_xref="GeneID:7384170" /translation="MQAVQQRLKAGGRAFAHIAQYHPELTAFRRDLHAHPELGFEEVY TSARVREALRHAGVDEVHEGIGRTGVVGIIHGQGRSSGSMIGLRADMDALPMAEHNDF AWKSCKSGLMHGCGHDGHTAMLVGAARYLATTRHFDGTAVLIFQPGEEGLGGARVMIE DGLFERFPVQSVYAMHNWPAMRPGTVGINSGAMMAAADRVTIEVTGRGGHGAHAYQTV DVVLVAAHIVTAVQGIVSRNVRPLESAVISLCAVQAGDLGAFSVLPGTATLVGTVRTF DPAVQEMVERRIKELCNAIALGFGATATVRYERIYPATINTESDARFAGDVAASLVGE ENVDRDLEPSMGAEDFSFMLQARPGAYLRLGQGMGAGNSTLHNSRYDFNDDVLPLGAA LHAGLVEQAMPLGQAQ" gene 690685..692256 /locus_tag="Dtpsy_0666" /db_xref="GeneID:7384171" CDS 690685..692256 /locus_tag="Dtpsy_0666" /note="PFAM: extracellular solute-binding protein family 5; KEGG: ajs:Ajs_0688 extracellular solute-binding protein" /codon_start=1 /inference="protein motif:PFAM:PF00496" /transl_table=11 /product="extracellular solute-binding protein family 5" /protein_id="YP_002552146.1" /db_xref="InterPro:IPR000914" /db_xref="GI:222109882" /db_xref="GeneID:7384171" /translation="MRNMALALVLQALAAIFLVANAQTIRVANQGDALSMDPHALNES LQLSLTGNVYEPLVGRNKDLSLVPALALAWRATTPTVWRFELRRGVSFHDGALFTADD AVFSLRRAQSEGSDMRSYLSGVREVRKLDAHTIEIETREPTPLLPALLSHVYMMNQRW SEAQGLAQVGDARGAAGQAAALRANGTGPFRLAERRPQQRTVFERNMRYWGTIESNAR QVVFLPIPDNEARVAALLAGRVDVMEPVPVQDIERVSAAGLVRVVTGPELRTLFLGMD QHSDELPYASVRGANPFKDRRVRQAFYQAIDIDALIKNVMRGAATPAALIVGPGVNGF QSDVKRLPHDVAAARALMAQAGYGEGFALTLDCPSDRYVNDAALCTAIAAQLATLQVR VTVRAEPKAQYYPRILRRDAGFYLMGWTPSTYDAHGALNALAACPRGEGAGHFNLGGY CNPRLDALLLQVQTQTDKTRRDVLLREALLLQAADIAYIPLHQQALAWGVSKKIRLVQ MADNTMPFKWMGVGP" sig_peptide 690685..690753 /locus_tag="Dtpsy_0666" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.987 at residue 23" gene 692304..693215 /locus_tag="Dtpsy_0667" /db_xref="GeneID:7384172" CDS 692304..693215 /locus_tag="Dtpsy_0667" /note="PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_0689 binding-protein-dependent transport systems inner membrane component" /codon_start=1 /inference="protein motif:PFAM:PF00528" /transl_table=11 /product="binding-protein-dependent transport systems inner membrane component" /protein_id="YP_002552147.1" /db_xref="InterPro:IPR000515" /db_xref="GI:222109883" /db_xref="GeneID:7384172" /translation="MKQTLLRWYDSDVAHSFRTSPVAIIAALIAAVCVFCSIFAGWVA PHNPFDLSTLELSDARLPPVWQAEGTWKYALGTDDQGRDILSALIYGARISLVVGLAS VALSVVVGVALGLVAGFRGGWVDGVLMRLCDVMLSFPAILIALLIAGVGRAVFPNAPD SLAFGVLILSISLTGWVQYARTVRGSTLVERNKEYVQAARVTGVSPLRIMRKHVLPNV LGPVMVLATIQVATAIITEATLSFLGVGAPPTSPSLGTLIRIGNDYLFSGEWWITVFP GVMLVLIALSVNLLGDWLRDALNPRLR" sig_peptide 692304..692426 /locus_tag="Dtpsy_0667" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.685) with cleavage site probability 0.667 at residue 41" gene 693398..694375 /locus_tag="Dtpsy_0668" /db_xref="GeneID:7384173" CDS 693398..694375 /locus_tag="Dtpsy_0668" /note="KEGG: ajs:Ajs_0690 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase" /codon_start=1 /inference="protein motif:TFAM:TIGR01727" /transl_table=11 /product="oligopeptide/dipeptide ABC transporter, ATPase subunit" /protein_id="YP_002552148.1" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR010066" /db_xref="InterPro:IPR013563" /db_xref="InterPro:IPR017871" /db_xref="GI:222109884" /db_xref="GeneID:7384173" /translation="MSLLEVHNLVVEFPGRRGTLRALDNVSFSIAPGEILGVVGESGA GKSLTGASIIGLLEPPGRVASGQIVLQGQRIDNLPHEQMRHIRGRKIGAIFQDPLTSL NPLYTVGQQLVETILTHLPMSAAQARQRAIDLLKDTGIPAAEQRIDHYPHQFSGGMRQ RVVIALALAAEPQLIVADEPTTALDVSIQAQIIQLLKSICKTRGAAVMLITHDMGVIA ETCDRVAVMYAGRVAEIGPVHEVINQPAHPYTAGLMASIPDMEQDRERLNQIDGAMPR LNAIPEGCAFNPRCPRAFDRCRQARPDLMPAGATQAACWLHDVTSEVAA" gene 694372..695406 /locus_tag="Dtpsy_0669" /db_xref="GeneID:7384174" CDS 694372..695406 /locus_tag="Dtpsy_0669" /note="KEGG: ajs:Ajs_0691 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase" /codon_start=1 /inference="protein motif:TFAM:TIGR01727" /transl_table=11 /product="oligopeptide/dipeptide ABC transporter, ATPase subunit" /protein_id="YP_002552149.1" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR010066" /db_xref="InterPro:IPR013563" /db_xref="InterPro:IPR017871" /db_xref="GI:222109885" /db_xref="GeneID:7384174" /translation="MSSTTTTTAPLVQAHDLAKTFDVSAPWLNRVIERKPRALLHAVD GVGFTIERGKTLALVGESGCGKSTVARLLVGLYEPTRGGLTFDGQDAHAAFKGKDARA MRRRIQMIFQDPYASLNPRWLVEDIIGEPLREHGLITDAAQLKKRVGELLQSVGLSPL DMAKYPHQFSGGQRQRISIARALATEPEFLVCDEPTSALDVSVQAQVLNIMKDLQRQR QLTYLFISHNLAVVRHVSDQVGVMYLGRLVELADKKVLFENPRHPYTRMLLDAIPKMH DTGRARTPVQGEVPNPLNPPPGCAFNPRCPYANDRCRTERPQLIDDGGTRVACHGVQE KRIPLVELAV" gene 695584..697497 /locus_tag="Dtpsy_0670" /db_xref="GeneID:7384175" CDS 695584..697497 /locus_tag="Dtpsy_0670" /EC_number="3.1.3.5" /note="PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: ajs:Ajs_0692 5'-nucleotidase" /codon_start=1 /inference="protein motif:PRIAM:3.1.3.5" /transl_table=11 /product="5'-nucleotidase" /protein_id="YP_002552150.1" /db_xref="InterPro:IPR004843" /db_xref="InterPro:IPR006146" /db_xref="InterPro:IPR006179" /db_xref="InterPro:IPR008334" /db_xref="GI:222109886" /db_xref="GeneID:7384175" /translation="MGSWMQWANKPYGRRVRMGAVALAACGVLAACGGNDDDEAQPLE LTVLHINDHHSTLDAKSKTLKLSTGGAAPVDVAVEAGGFARVTAAFDSLAKAAGANVL KLHAGDALTGTLYFNRAGADGEADAALMNTVCFDAFTLGNHEFDKGDAGLKGFLDLLK KGSCKTAVLSANVKFGAGSALNATKAPGYVQPSTVVERSGQKIGIVGLTIAGKTKASS SPDADTTFEDEVTAAQREIDKLRAQSINKIIVMSHVGYGYDKEIAAKLSGVDVIVGGD SHTLLGPDALKTTGVGTPSGAYPTRVTDKDGKNVCVVQAWEYAQVVGELNVRFDGKGE VTQCSGTPHVLIGSDFTINKLPPTDAEKKAIDADVAAKGFLRVTQPAAAATTALQPFK DRVAVFNKTNVAVVPKELCFRRVPGNPGSGGSSPTCNAEGSVHLRGGDIQQLVAQAYV DEGNAKYGGADISLQSGGGVRIALDGTVTAAQVIQVLPFGNMLFRLDVTGAEVKSMLE DGLEAVFKAGGSTGPYPYTGGLRFDVNASAAFGQRASGLEVRNAATGTWGPIDPAKTY RLFVLSFNATGGDGYKTLAAVPAARRLDIGVLDADVFFSYIDKQPRDAATGLPMLNRL SHELYSTKSFAGQ" sig_peptide 695584..695685 /locus_tag="Dtpsy_0670" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.883) with cleavage site probability 0.627 at residue 34" gene 697576..698070 /locus_tag="Dtpsy_0671" /db_xref="GeneID:7384176" CDS 697576..698070 /locus_tag="Dtpsy_0671" /note="PFAM: PEBP family protein; KEGG: ajs:Ajs_0693 PBP family phospholipid-binding protein" /codon_start=1 /inference="protein motif:PFAM:PF01161" /transl_table=11 /product="PEBP family protein" /protein_id="YP_002552151.1" /db_xref="InterPro:IPR005247" /db_xref="InterPro:IPR008914" /db_xref="GI:222109887" /db_xref="GeneID:7384176" /translation="MTAFTLTSPDIADGSTIAQSFEFDGFGCSGRNQSPVLRWSGAPE GTKGFAVNVYDPDAPTGSGFWHWYVIDLPASVSELPANAGAKGGAHLPAGARQIRNDY GQYAWGGMCPPPGDKPHRYIFTVHALSVERIDVPDDAPAALAGFMVNAHTLAKASFTA TYGR" gene complement(698331..699176) /locus_tag="Dtpsy_0672" /db_xref="GeneID:7384177" CDS complement(698331..699176) /locus_tag="Dtpsy_0672" /note="PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: ajs:Ajs_0694 RpiR family transcriptional regulator" /codon_start=1 /inference="protein motif:PFAM:PF01418" /transl_table=11 /product="transcriptional regulator, RpiR family" /protein_id="YP_002552152.1" /db_xref="InterPro:IPR000281" /db_xref="InterPro:IPR000843" /db_xref="InterPro:IPR001347" /db_xref="GI:222109888" /db_xref="GeneID:7384177" /translation="MLDRITASLPSLAPAEQRVAQLVLDDPRAFAHLPVRELAARARV SKPTVVRFCRSMGYDGLADFKLKLAGSVSEGVPFIHRSVDADDKTNDVLVKVVDNAVA AFLQYRSAASTNALERAAEAIASTWQTGRRIEFYGAGNSGIVAQDAQHKFFRLGITSI STSDGHMQVMSATLLGPGDCAVIISNSGRTRDLMDAADIARKNGATTIAITASGSPLA HTCRIHLAADHPEGYDRYSPMVSRLLHLLIIDVVATCVALRIGEPLQPVLQQMKNNLR AKRYT" gene complement(699170..700645) /locus_tag="Dtpsy_0673" /db_xref="GeneID:7384178" CDS complement(699170..700645) /locus_tag="Dtpsy_0673" /EC_number="1.1.1.49" /note="KEGG: ajs:Ajs_0695 glucose-6-phosphate 1-dehydrogenase; TIGRFAM: glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase" /codon_start=1 /inference="protein motif:TFAM:TIGR00871" /transl_table=11 /product="glucose-6-phosphate 1-dehydrogenase" /protein_id="YP_002552153.1" /db_xref="InterPro:IPR001282" /db_xref="GI:222109889" /db_xref="GeneID:7384178" /translation="MSFDLVLFGGTGDLAWRKLLPALFQAFRHGSLPPQGRIIGVARD ALSDGDYRALIARRFADVEGEKRPSDEEFERFAALLQYQRMDLSQPEDYALLARRLHE RHADTVVMYLATAPALFTTVCEQLGAAGLATPATRVVLEKPLGHDLASNRAINAAVRS VFDERQIFRIDHYLGKPSVQNLLALRFGNALFEPLWRRETVASIEITMAEQLGVEQRG AFYDQTGALRDMVQNHALQLLCAIAMEPPINAHADAIRDEKLKVLRSLSTWTPATLLR DVVRGQYSTGTTACEGVRAYADEDGVAPGSTTETFVALRTEIANWRWAGVPFYIRTGK RLAAREAHIAINFRPTPHAIYRTPLGAANRLVIHLQPRDGLALHLFAAGQEKRGMRIS EAQALAPVQLDLDFDQRFGSQRVGAYERLLLDVIAGRLNLFVRADEQEAAWHWVEPIM QAWAEQDARGEGPRPYAAGSWGPSAASALVAREGHTWMEEC" gene 700841..701791 /locus_tag="Dtpsy_0674" /db_xref="GeneID:7384179" CDS 700841..701791 /locus_tag="Dtpsy_0674" /EC_number="2.2.1.2" /note="KEGG: ajs:Ajs_0696 transaldolase B; TIGRFAM: transaldolase; PFAM: Transaldolase" /codon_start=1 /inference="protein motif:TFAM:TIGR00874" /transl_table=11 /product="transaldolase" /protein_id="YP_002552154.1" /db_xref="InterPro:IPR001585" /db_xref="InterPro:IPR004730" /db_xref="GI:222109890" /db_xref="GeneID:7384179" /translation="MNQLDALKQYTTVVADTGDFKQLAQFQPQDATTNPSLILKAVQK PEYAPLLKDCVTRWHGRAIDELMDRLIVRFGCEILSIIPGRVSTEVDARLSFDTAATV ARAERIVELYQAEGLHIDRVLIKIAATWEGIQAARQLEQRGIHTNLTLLFSFAQAVAC GQAKVQLISPFVGRIYDWYKKQAGANWDEAAMAGANDPGVQSVRAIYNHYKHFGIGTE VMGASFRNTGQIVALAGCDLLTIAPELLAQLAASDAPVARVLDPEAARRVALQPVQYD EAGFRYALNADAMATEKLAEGIRAFAADAAKLEQLMQAAA" gene 701788..703404 /locus_tag="Dtpsy_0675" /db_xref="GeneID:7384180" CDS 701788..703404 /locus_tag="Dtpsy_0675" /EC_number="5.3.1.9" /note="PFAM: phosphoglucose isomerase (PGI); KEGG: ajs:Ajs_0697 glucose-6-phosphate isomerase" /codon_start=1 /inference="protein motif:PRIAM:5.3.1.9" /transl_table=11 /product="Glucose-6-phosphate isomerase" /protein_id="YP_002552155.1" /db_xref="InterPro:IPR001672" /db_xref="GI:222109891" /db_xref="GeneID:7384180" /translation="MNFDDPRTRCDHTTAWQRLRAHYESAGRSFDLRAAFAQDAQRFE RFSQDAPHVFADLSKNLIDAPTEALLLQLARECGVVAYRDAMFEGRPINNTEQRAVMH WLLRKPAPGHTGQARVAIDTVAPEIASALHDVHAMLEDMLALAERVRADDGITDIVNI GIGGSDLGPAMVVKALDDLRHPGKRLHFISNVDGMELGSLLRQLRPESTLFLIASKTF TTAETMSNAQAARAWFLDQGGSEDARARLPLARHFYALTTNLEAAAQFGITTTLGFWD WVGGRYSLWSAIGLPIAIAVGAPHFRALLAGAHAMDEHFRTAPLESNLPVRLALLDLW YRNFHDFSSRSMAPYSHGLRRLPAYLQQLEMESNGKGVDAHGQPLPYATSAVVWGEPG TNGQHAFFQMIHQGPDTVPVEFIALREPGRDLPDQHPRLVANALAQARALMMGRPEEA DGHRRFSGNRPSTFLVLERLDPASLGALIALYEHRVFTSGALWGINSFDQWGVELGKG IAKDLEPRLATGDVQGLDPSSAGLLRRLAA" gene complement(703435..704601) /locus_tag="Dtpsy_0676" /db_xref="GeneID:7384181" CDS complement(703435..704601) /locus_tag="Dtpsy_0676" /note="KEGG: ajs:Ajs_0698 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein" /codon_start=1 /inference="protein motif:TFAM:TIGR00254" /transl_table=11 /product="diguanylate cyclase" /protein_id="YP_002552156.1" /db_xref="InterPro:IPR000160" /db_xref="GI:222109892" /db_xref="GeneID:7384181" /translation="MHTTSRRLFPCILSRAPYRRVRVGMALLALLLMSSSALVMLLLH HPSANHHLDAVRWWAALSVGGLAVITLLIRTGWSERLRDPSLTLVQMAWTITSGAVAY VLAGEGRGVVPSVLAMILFFGALGLSPRQVVGIGLYAMAAFSVAVVVSPRFYATTFDV MDGAYAAMILIVLAGCMVVNLRVQQMRQRLDRQREALAEALAENRALAMRDELTGLYN RRAMVELIQLECRRRRRGQGALLFAMIDVDHFKRVNDHHGHAMGDHVLRVFADALRAN VRETDVLARWGGDEFLLLLSDIEPRSAQTLLERTREAIAALPVPNAPPDLRLSMSAGL ALHLPHSSPQETLERADQALYAAKDQGRNRVALAPELQPAPVDDAPAMPQAARA" sig_peptide complement(704482..704601) /locus_tag="Dtpsy_0676" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.958 at residue 40" gene complement(704872..706512) /locus_tag="Dtpsy_0677" /db_xref="GeneID:7384182" CDS complement(704872..706512) /locus_tag="Dtpsy_0677" /note="TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: ajs:Ajs_0699 chaperonin GroEL" /codon_start=1 /inference="protein motif:TFAM:TIGR02348" /transl_table=11 /product="chaperonin GroEL" /protein_id="YP_002552157.1" /db_xref="InterPro:IPR001844" /db_xref="InterPro:IPR002423" /db_xref="InterPro:IPR012723" /db_xref="GI:222109893" /db_xref="GeneID:7384182" /translation="MAAKDVVFGGEARARMVEGVNILANAVKVTLGPKGRNVVLERSF GAPTVTKDGVSVAKEIELKDKLQNMGAQLVKEVASKTNDIAGDGTTTATVLAQAIVRE GSKYVAAGLNPMDLKRGIDKAVVALVEELKKASKATTTSKEIAQVGSISANSDESVGK IIADAMDKVGKEGVITVEDGKSLENELDVVEGMQFDRGYLSPYFINNPEKQSAILDNP FVLLFDKKISNIRDLLPTLEQVAKASRPLLIIAEEVDGEALATLVVNTIRGILKVVAV KAPGFGDRRKAMLEDIAILTGGKVIAEEVGLTLEKVTLADLGQAKRIEVGKENTTIID GAGAAADIEARVKQIRIQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEK KARVEDALHATRAAVEEGIVAGGGVALLRAKQAVGNLSTGNPEQDAGIKLVLKAVEAP LREIVANAGGEPSVVVNEVLNGKGNYGFNAANDTYGDMLEMGILDPTKVTRTALQNAA SVASLLLTTEAMVAEAPKDESAAPAMPGGMGGMGDMGM" gene complement(706603..706893) /locus_tag="Dtpsy_0678" /db_xref="GeneID:7384183" CDS complement(706603..706893) /locus_tag="Dtpsy_0678" /note="PFAM: chaperonin Cpn10; KEGG: ajs:Ajs_0700 chaperonin Cpn10" /codon_start=1 /inference="protein motif:PFAM:PF00166" /transl_table=11 /product="chaperonin Cpn10" /protein_id="YP_002552158.1" /db_xref="InterPro:IPR001476" /db_xref="GI:222109894" /db_xref="GeneID:7384183" /translation="MNLRPLHDRVIVKRIESETTTASGIVIPDNAAEKPDQGEVLAVG PGKKNDKGELIALNVKVGDRVLFGKYSGQTVKVNGDELLVMKEDDLFAVVEK" gene complement(707104..708138) /locus_tag="Dtpsy_0679" /db_xref="GeneID:7384184" CDS complement(707104..708138) /locus_tag="Dtpsy_0679" /note="TIGRFAM: cytidyltransferase-related domain protein; PFAM: NUDIX hydrolase; cytidylyltransferase; KEGG: ajs:Ajs_0701 cytidyltransferase-like protein" /codon_start=1 /inference="protein motif:TFAM:TIGR00125" /transl_table=11 /product="cytidyltransferase-related domain protein" /protein_id="YP_002552159.1" /db_xref="InterPro:IPR000086" /db_xref="InterPro:IPR004820" /db_xref="InterPro:IPR004821" /db_xref="GI:222109895" /db_xref="GeneID:7384184" /translation="MYDTAILIGRFEPVHTGHLALLREALVQARQVIVIVGSAFQART PKNPFTWHEREAMLRGALPEGDRTRLTVLPVRDYYNEAVWVEAVRNAVARHSPPQARV GLVGHFKDATSSYLSAFPGWELIRMERQGRIDATAIRDAYFGATPATVAHALQPLAPM LPPATQALLEQFAHTPHFATLQQEWQMLRGYRAAWATAPYPPVFVTVDAVLRCQDHVL LIRRAHAPGRGLLAVPGGFIEQRETLWQSCLRELAEETNCALPEATLRAALRSVTVFD HPDRSQRGRTITHAHYFDLQDAPLPPVQAADDAAHAEWVAIDRLAGMEEAFFEDHFHM LDHFLRLTVH" gene complement(708194..709051) /locus_tag="Dtpsy_0680" /db_xref="GeneID:7384185" CDS complement(708194..709051) /locus_tag="Dtpsy_0680" /note="KEGG: ajs:Ajs_0702 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0702" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002552160.1" /db_xref="GI:222109896" /db_xref="GeneID:7384185" /translation="MTRTVHLLAIDPQNDFCDLPAAWHSRDPHSGAVTAPALPVPGAH ADMQRLAAFIRAQGAGIDHITVTLDSHQRYDVAHPAYWQRSDGGAVAPFTAITAAQVR AGAFAPRDPAALARTLDYLDTLETQGRYTLMVWPVHCEIGSWGHGVHTDVLAACSDWQ AHRLRAVQSVFKGMSPWTEHYSAVQAEVPDAADPHTALNTHLLDQLASADLLLIAGEA SSHCVRATTEHIIQHLARLHPGWSPRRLVLLTDCMSPVAGFEAQHEAFLEAMHAQGAR LATSSEICL" gene complement(709118..709387) /locus_tag="Dtpsy_0681" /db_xref="GeneID:7384186" CDS complement(709118..709387) /locus_tag="Dtpsy_0681" /note="PFAM: protein of unknown function DUF1328; KEGG: ajs:Ajs_0703 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF07043" /transl_table=11 /product="protein of unknown function DUF1328" /protein_id="YP_002552161.1" /db_xref="InterPro:IPR009760" /db_xref="GI:222109897" /db_xref="GeneID:7384186" /translation="MTERLRRRPYSGAQPPHPPAAHPKEAYPMLKYAIIFAIISLIAG ALGFTGVAAGSAAIAKVLFVVFLVLAVLFVVLALLGIGAARKAIK" gene 709445..710173 /locus_tag="Dtpsy_0682" /db_xref="GeneID:7384187" CDS 709445..710173 /locus_tag="Dtpsy_0682" /note="KEGG: NACA, TEBP; nascent polypeptide-associated complex alpha subunit" /codon_start=1 /inference="ab initio prediction:Prodigal:1.4" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002552162.1" /db_xref="GI:222109898" /db_xref="GeneID:7384187" /translation="MQHRAADDRQQHGARAFCGGHPQNPSQDDGNRPGAVQPLQHRRR ARQQQEQVGVNSAFLGSLDAGAGGVLEKMASARAYMRGLAQQGIAAALQQAAALSAEN LPAQPPRVRAMRCGSGAGPQSPVPAPPWPARLQRPAARAALTCAPAQGYKPAAWRHAA AYWSAFATRRDMNSAPKLRDCLDADVGFIAPPLHAAPGLCAARLPHPLARVAVPYSPA AARSAAALSVLSQVNSGSSRPKWP" gene complement(710086..711267) /locus_tag="Dtpsy_0683" /db_xref="GeneID:7384188" CDS complement(710086..711267) /locus_tag="Dtpsy_0683" /EC_number="2.5.1.6" /note="KEGG: ajs:Ajs_0705 S-adenosylmethionine synthetase; TIGRFAM: S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase" /codon_start=1 /inference="protein motif:TFAM:TIGR01034" /transl_table=11 /product="S-adenosylmethionine synthetase" /protein_id="YP_002552163.1" /db_xref="InterPro:IPR002133" /db_xref="GI:222109899" /db_xref="GeneID:7384188" /translation="MANDFLFTSESVSEGHPDKVADQISDAILDAIFTQDPRSRVAAE TLTNTGLVVLAGEITTNAHVDYIQVARDTIKRIGYDNTEYGIDYKGCAVLVAYDKQSN DIAQGVDHASDDHLNTGAGDQGLMFGYACDETPELMPAPIYYAHRLVERQAQLRKDGR LPFLRPDAKSQVTMRYVDGKPHSIDTVVLSTQHSPDQSETATKMKASFTEAIIEEIIK PVLPKEWLQDTKYLINPTGRFVIGGPQGDCGLTGRKIIVDTYGGACPHGGGAFSGKDP TKVDRSAAYAARYVAKNIVAAGLARQCQIQVAYAIGVARPMNITVYTEGTGVIPDDQI AQLVQEHFDLRPKGIIQMLDLLRPIYAKTAAYGHFGREEPEFTWERTDKAAALRAAAG L" gene 711400..712275 /locus_tag="Dtpsy_0684" /db_xref="GeneID:7384189" CDS 711400..712275 /locus_tag="Dtpsy_0684" /note="PFAM: lipid A biosynthesis acyltransferase; KEGG: ajs:Ajs_0706 lipid A biosynthesis acyltransferase" /codon_start=1 /inference="protein motif:PFAM:PF03279" /transl_table=11 /product="lipid A biosynthesis acyltransferase" /protein_id="YP_002552164.1" /db_xref="InterPro:IPR004960" /db_xref="GI:222109900" /db_xref="GeneID:7384189" /translation="MSSLFRLVSALPLWLLHVIGAALGWVAFCASPTYRRRFIDNAAR AGYALRDVRAAIAHAGRMVAEAPRLWLRPEPPACEIHGAECVQRAWGQGRGIVFLTPH IGCFELSVQAAARRWSPEHGPITILYRPARQRWLAEVMQTARNRPGIQAVPTTLQGVR QMIKALRRGEAVGLLPDQVPPQGLGVWSPFFGRPAYTMTLAARLVQQTGAAVILARCE RLPRGRGYVLHLEDLPQPLAPTLDAAVLQLNQAMEYLIRQSPDQYLWGYARYKQPRAE MHTSAGTDAPPEGRA" sig_peptide 711400..711474 /locus_tag="Dtpsy_0684" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.735) with cleavage site probability 0.482 at residue 25" gene 712272..713144 /locus_tag="Dtpsy_0685" /db_xref="GeneID:7384190" CDS 712272..713144 /locus_tag="Dtpsy_0685" /note="PFAM: lipid A biosynthesis acyltransferase; KEGG: ajs:Ajs_0707 lipid A biosynthesis acyltransferase" /codon_start=1 /inference="protein motif:PFAM:PF03279" /transl_table=11 /product="lipid A biosynthesis acyltransferase" /protein_id="YP_002552165.1" /db_xref="InterPro:IPR004960" /db_xref="GI:222109901" /db_xref="GeneID:7384190" /translation="MMARAGIALLNLLGRLPLPMLRALGRFIGRVLFVLAVPRRRVAL RNLALCFPEVPESQRRAWARESFVVFCQTFLDRGWLWSGSEALVRSRVKLVGALHELE GDTPTIVFAPHFYSMDAGGLALPLNTRREFTSIFATNPDPVLDAWFMAGRQRFGNVRM LNRADGVKPIISCLRKGGLLYLLPDMDYGRNDSVFVPFFAMPDAATIPSLSRFARLGR AKVVALYSRMTPEGYVAELTPAWDHFPTEDHVADTARMNRELEAAIRTMPAQYYWVHK RFKTRPEGQDSVYQ" gene 713239..714327 /locus_tag="Dtpsy_0686" /db_xref="GeneID:7384191" CDS 713239..714327 /locus_tag="Dtpsy_0686" /note="PFAM: transposase IS4 family protein; KEGG: ajs:Ajs_3918 transposase, IS4 family protein" /codon_start=1 /inference="protein motif:PFAM:PF01609" /transl_table=11 /product="transposase IS4 family protein" /protein_id="YP_002552166.1" /db_xref="InterPro:IPR002559" /db_xref="GI:222109902" /db_xref="GeneID:7384191" /translation="MRGNQDFQGAMFSYISLEERVPQAHPLRKLRAVVDALLATMNRE FEAVYARRGRPSVPPEMLLKALLLQILFSIRSERQLVEAINYNLLYRWFVGLNIEDKV WDHSTFSANRERLFNEDLARTFFERVKLSAQWGKLASDEHFSVDGTLIDAWASHKSFK RKDDDSGTPPGRNPEVDFKGQERCNDTHKSTTDADARLFKKSRGDKSRLCHMGHILME NRNGLIVDVEITHASGTAEREAALAMLERRGNRNKRATVGADKGYDSKAFIKGCRKLK VTPHVAAKDKHSAVDARVTRHEGYKTSLKVRKRIEEAFGWIKTVGGLAKTKLIGQAKL TGQALLCFATYNLVRMGSIGGWWNAHHA" gene 714340..714489 /locus_tag="Dtpsy_0687" /pseudo /db_xref="GeneID:7384192" gene complement(714515..715444) /locus_tag="Dtpsy_0688" /db_xref="GeneID:7384193" CDS complement(714515..715444) /locus_tag="Dtpsy_0688" /note="PFAM: alpha/beta hydrolase fold; KEGG: ajs:Ajs_0708 alpha/beta hydrolase fold" /codon_start=1 /inference="protein motif:PFAM:PF00561" /transl_table=11 /product="alpha/beta hydrolase fold protein" /protein_id="YP_002552167.1" /db_xref="InterPro:IPR000073" /db_xref="InterPro:IPR000639" /db_xref="GI:222109903" /db_xref="GeneID:7384193" /translation="MAETITHTLPHGITLHCRVAGMPGRPVLLFLHGFPEGAFIWDAL LGHFADPAHGGYRCVAPWLRGYAPSSAPAAIEAYRPKHLVQDIAALIAQEAGAGTPLA ALVAHDWGGAVAWNLANQHPGLLKRLMVINAPHPGAFLRELQGSAAQQEASAYMHFLC RPDAESLLAENDFARLFGFFRRADGSAPGWLTPALRAHYRAQWAAGLAGPCNYYRASP LRPPRPASARDVGTPDIRSLTLPADMLQVSVPTQVLWGMEDPALLPGLLQGLQAWVPR LQVLHVPGATHWVVHEQPGLVRDTLADFLRQSL" gene complement(715493..716149) /locus_tag="Dtpsy_0689" /db_xref="GeneID:7384194" CDS complement(715493..716149) /locus_tag="Dtpsy_0689" /note="TIGRFAM: GTP-binding protein HSR1-related; PFAM: GTP-binding protein HSR1-related; KEGG: ajs:Ajs_0709 GTP-binding protein, HSR1-related" /codon_start=1 /inference="protein motif:TFAM:TIGR03598" /transl_table=11 /product="GTP-binding protein HSR1-related" /protein_id="YP_002552168.1" /db_xref="InterPro:IPR002917" /db_xref="GI:222109904" /db_xref="GeneID:7384194" /translation="MGWMHTARFLTTAAQLHHLPAIEVPEIAFVGRSNAGKSTCINTL TQQRQLAFASKKPGRTQHINLFALGKQGATDAVLADLPGYGYAAVSRSDKLRWQQVML SYLVSRESLTAIVLLCDPRLGLTELDEALLNAVRPRVEAGLKFLVLLTKADKLTRAEQ AKALSITRLQAGGGEVRMFSALKKQGVDEVAQLLWQWAHPVQKEDAAVEALPPSKDQN " gene 716300..716938 /locus_tag="Dtpsy_0690" /db_xref="GeneID:7384195" CDS 716300..716938 /locus_tag="Dtpsy_0690" /note="PFAM: cytochrome c class I; KEGG: ajs:Ajs_0710 cytochrome c, class I" /codon_start=1 /inference="protein motif:PFAM:PF00034" /transl_table=11 /product="cytochrome c class I" /protein_id="YP_002552169.1" /db_xref="InterPro:IPR003088" /db_xref="InterPro:IPR008168" /db_xref="InterPro:IPR009056" /db_xref="GI:222109905" /db_xref="GeneID:7384195" /translation="MKLLASLLMAAALAVPAASALAAGETPAPQKAAKPDLVKGEASY AAVCAACHAADGNSTIAANPKLAQQHPEYLVKQLQEFKAGKRADPIMQGMAAILSEDD MRNVSWWLASKQAKEGFAKDKDLVAMGERIYRGGIQERNIAACAGCHSPNGSGIPAQY PRLSGQHADYTVKQLVDFRDGKRGNNVQMRDVAAKLNDREIKAVADYIAGLR" sig_peptide 716300..716368 /locus_tag="Dtpsy_0690" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.971 at residue 23" gene 717107..719260 /locus_tag="Dtpsy_0691" /db_xref="GeneID:7384196" CDS 717107..719260 /locus_tag="Dtpsy_0691" /note="PFAM: ResB family protein; KEGG: ajs:Ajs_0711 ResB family protein" /codon_start=1 /inference="protein motif:PFAM:PF05140" /transl_table=11 /product="ResB family protein" /protein_id="YP_002552170.1" /db_xref="InterPro:IPR007816" /db_xref="GI:222109906" /db_xref="GeneID:7384196" /translation="MSDTTFGPSSAPRTHAMRSMTELLASMRFAIALLTVICIASVIG TVLKQHEPAVNYVNQFGPFWADVFLALKLNAVYSAWWFLVILGFLVVSTSLCIARHAP KYLADLRTYKEDIREKSLQAFHHKASAELAAETPEAAARRVGQQLVAKGWKVRLQQRQ TPAGDGWMVAAKAGAANKLGYIAAHSAIVLVCLGGLLDGDLVVRAQMWFGGKTPYAGS GLISEVKPEHRLSERNPTFRGNLVVAEGTQSGTAILSQSDGVLLQELPFAVELKKFIV EHYSTGMPKLFASEIVIHDRATGEATPARVEVNHPVSYRGIEIYQSSFDDGGSEVHLR ARPMAPGAEPFDVQGVIGGSTRLTHSGSGEGMTLEFTGLRVLNVENFGDTGASGSGAD VRKVDLRESIESRLGAGNKTVSKRELRNVGPSITYKLRDAAGQAREFHNFMLPVDTGD GQPMYLLGVRETPAEPFRYLRVPVDAEGGMDGFLRMRLALADPQMRELAVRRYAAAAV DGARPELAEQLAQSAGRALALFAGAIDEPAAAGGRPRGGLQAISDFMEANVPEDERNR ASEVLVRILNGALFELAQITRERAGLAPLPQNGATQAFMTQAVLSLSDAQAYPVPLAF ELRDFKQVQASVFQVARAPGKNVVYLGCALLIIGVFAMLYVRERRVWVWLAPQDAGAR ATMALSTNRKTLDADREFAQLTTQLIGTSPHGGAS" gene 719257..720591 /locus_tag="Dtpsy_0692" /db_xref="GeneID:7384197" CDS 719257..720591 /locus_tag="Dtpsy_0692" /note="TIGRFAM: cytochrome c-type biogenesis protein CcsB; PFAM: cytochrome c assembly protein; KEGG: ajs:Ajs_0712 cytochrome c assembly protein" /codon_start=1 /inference="protein motif:TFAM:TIGR03144" /transl_table=11 /product="cytochrome c-type biogenesis protein CcsB" /protein_id="YP_002552171.1" /db_xref="InterPro:IPR002541" /db_xref="InterPro:IPR017562" /db_xref="GI:222109907" /db_xref="GeneID:7384197" /translation="MNTATTTLTLSEGYFARRSWWDWLFALLVVAGGVFALQRYAAYM DVYEKAILLGSIPSAIWLGWFWRPLSTLMLMVAACSLLAIGLYQNNGAGDLARADTIF GLKYFLSSQSAILWMSMLFFMSTAFYWVGMLSRGQGQTMMRIGSRIAWVAVALALIGT MVRWYESYQIGPDIGHIPVSNLYEVFVMFCWMTAVFYLYYEEQYETRALGGFVMLVVS AAVGFLLWYTVVREAHEIQPLVPALKSWWMKLHVPANFIGYGTFALSAMVAFAYLIKQ QASETRWWKLTPLWLLGVVLCFEPIVFRQGAADNGGGYWMVYFGVSALIVAGILLARR RIAERLPSFEILDDVMYKSIAVGFAFFTIATVLGALWAAEAWGGYWSWDPKETWALIV WLNYAAWLHMRLMKGLRGTMSAWWALVGLAVTTFAFLGVNMFLSGLHSYGTL" gene 720683..721681 /locus_tag="Dtpsy_0693" /db_xref="GeneID:7384198" CDS 720683..721681 /locus_tag="Dtpsy_0693" /note="PFAM: oxidoreductase molybdopterin binding; KEGG: ajs:Ajs_0713 putative sulfite oxidase subunit YedY" /codon_start=1 /inference="protein motif:PFAM:PF00174" /transl_table=11 /product="oxidoreductase molybdopterin binding" /protein_id="YP_002552172.1" /db_xref="InterPro:IPR000572" /db_xref="GI:222109908" /db_xref="GeneID:7384198" /translation="MLIPTRDNGYIHPCAGEITPRAVYEQRRAMLRLLAAGAGGAAMA GWAGRVALADQVRRPGRLAPLPGAPSAVPGAVTMEKVTEYQDATTYNNFYEFGTDKSD PARNAHTLKTRPWTVEVEGLVNKPRRFDIDELLKLSAQEDRIYRLRCVEGWSMVIPWV GYSLAELIKRVEPQGSAKYVEFVTLADKATMPYVGSHVLDWPYTEGLRLDEAMHPLTL LAFGMYGEVLPNQNGAPVRIVVPWKYGFKSAKSIVKIRFVEKEPGTAWNKAARQEYGF YSNVNPDVDHPRWSQATERRIGEGGLFAKKRKTLLFNGYEAQVGQLYAGMDLRKFY" gene 721681..722340 /locus_tag="Dtpsy_0694" /db_xref="GeneID:7384199" CDS 721681..722340 /locus_tag="Dtpsy_0694" /note="PFAM: Ferric reductase domain protein transmembrane component domain; KEGG: ajs:Ajs_0714 ferric reductase domain-containing protein" /codon_start=1 /inference="protein motif:PFAM:PF01794" /transl_table=11 /product="Ferric reductase domain protein transmembrane component" /protein_id="YP_002552173.1" /db_xref="InterPro:IPR013130" /db_xref="GI:222109909" /db_xref="GeneID:7384199" /translation="MGHARLSGSTPALAGRGWGARVLLHPAAKPVLFVLCLLPLAWLV YGAAADRLGANPAEALIRSTGDWTLRMLCLTLAVTPLRLALAQPPLARFRRMLGLYTF AYAALHLLCYSWFDMGLDVPEIVRDVLKRPFILVGMGCFAVLLALAATSFNRAMRWMG GRRWQQLHRGVYLAAGLAILHFFWMRSGKNDFAEVAVYAAILAALLLARPWLRRRRRV V" gene complement(722407..723243) /locus_tag="Dtpsy_0695" /db_xref="GeneID:7384200" CDS complement(722407..723243) /locus_tag="Dtpsy_0695" /note="PFAM: beta-lactamase domain protein; KEGG: ajs:Ajs_0715 beta-lactamase domain-containing protein" /codon_start=1 /inference="protein motif:PFAM:PF00753" /transl_table=11 /product="beta-lactamase domain protein" /protein_id="YP_002552174.1" /db_xref="InterPro:IPR001279" /db_xref="GI:222109910" /db_xref="GeneID:7384200" /translation="MPQEPLELYRDKNHACLMFSDLVEEDGQAVQANQFLIVDDDTGA IIDPGGNLAFNELFMGMSKHFPPHKLSYLIASHADPDIIASLDRWLSSTKATLVISRI WERFAPHFTKLGKTENRIIGVPDSGGRLPLGRHELVLLPAHFMHSEGNFHFYDPVSRI LFTGDLGVSMTSGADARVPVTHLAPHIPRMEGFHRRYMVSNKILRLWTRMARQLDIAM VVPQHGAPIMGKPAIDDFFQWLDSLMCGIDLFDDRAYQIPTGHIDPVTRQVRPALQAV RA" gene complement(723308..724603) /locus_tag="Dtpsy_0696" /db_xref="GeneID:7384201" CDS complement(723308..724603) /locus_tag="Dtpsy_0696" /note="TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: ajs:Ajs_0716 diaminopimelate decarboxylase" /codon_start=1 /inference="protein motif:TFAM:TIGR01048" /transl_table=11 /product="diaminopimelate decarboxylase" /protein_id="YP_002552175.1" /db_xref="InterPro:IPR000183" /db_xref="InterPro:IPR002986" /db_xref="GI:222109911" /db_xref="GeneID:7384201" /translation="MTHPVLPGHPHLHYHDQALQLEGLRLADLAREFGTPLYVYSQAA MLDALGAYQRGFAGRKVQICYAMKANSSLAVLQLFARHGCGFDIVSAGELQRVIAAGG DPAKVIFSGVGKTRAEMRQALEVGIGCFNVESEAELEVLSEVAQSMGLRAPISIRVNP NVDAKTHPYISTGLKGNKFGIAHERTVATYQRAAALPGLRVVGIDCHIGSQITEESPY LDAMDRMLDLVQAIEAAGIAVHHIDFGGGLGIDYNGDTPPRADALWAKLLAKLDARGY GDRQLMIEPGRSLVGNAGVCLTEVLYLKPGEQKNFCIVDAAMNDLPRPAMYQAYHAIV PLQATAPTAVSHVYDVVGPICESGDWIGRDRNLAVAAGDMLAVLSAGAYCSSMGSTYN TRPRPAEVLVDGARAHLIRTRESVNDIFRSEKLVPQGNP" gene 724822..725151 /locus_tag="Dtpsy_0697" /db_xref="GeneID:7384202" CDS 724822..725151 /locus_tag="Dtpsy_0697" /note="TIGRFAM: iron donor protein CyaY; PFAM: Frataxin family protein; KEGG: ajs:Ajs_0728 frataxin family protein" /codon_start=1 /inference="protein motif:TFAM:TIGR03421" /transl_table=11 /product="iron donor protein CyaY" /protein_id="YP_002552176.1" /db_xref="InterPro:IPR002908" /db_xref="GI:222109912" /db_xref="GeneID:7384202" /translation="MTDLEFMDRAEKLLLAVEQSCDRINDTTDADLDGQRTGGMVTIT FRNRSQIVINLQKPLHEIWMAAQSGGYHFRHDGTAWMDTKGAGEFFAALSHNATLQAG EALQFTD" gene complement(725227..727566) /locus_tag="Dtpsy_0698" /db_xref="GeneID:7384203" CDS complement(725227..727566) /locus_tag="Dtpsy_0698" /EC_number="2.4.1.129" /note="KEGG: ajs:Ajs_0729 1A family penicillin-binding protein; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase" /codon_start=1 /inference="protein motif:TFAM:TIGR02074" /transl_table=11 /product="penicillin-binding protein, 1A family" /protein_id="YP_002552177.1" /db_xref="InterPro:IPR001264" /db_xref="InterPro:IPR001460" /db_xref="InterPro:IPR011816" /db_xref="GI:222109913" /db_xref="GeneID:7384203" /translation="MPRAVRWLLLGFTWILGLGVAATLTGALAIGLGLAVAYPNLPDV SDLADYRPKLPLRVYSAEGALLGEFGEERRNLTPIQDIPPVMTNAVLAIEDARFFQHG GVDYKGVLRAALANLGRVKSQGASTITMQVARNVYLSSEKTFTRKIYEILLTFKLEHL LTKNQILEIYMNQIYLGNRAYGFAAAAETYFGKPLKSISIAEAAMLAGLPKAPSAYNP ISNPKRARIRQLYIIDRMLENGFITAEEATAAKQEDLKLRSSTDSTRIHAEYVAEMAR QLIYAQYGPEAYTRGLNVYTTLNAGEQETAYTALRKGIMDYERRQHYRGPERFVSLPS ASEETEDAIDDALANHPDNGNVLAAVVLEVNAKRILAARADGEQIEITGEGLKPAQSG LSEKAPPNIKLRRGAVIRVVQTPKKTWEITQLPEVEGAFVAIDPRSGAIRALVGGFDF DKNKFNHVTQAWRQPGSAFKPFIYSAALEKGFTPATVINDAPLFFSAGVTGGQPWEPK NYDGKYDGPMTMRAGLARSKNVVSIRILQAVGPKNGQDWVTRFGFEADKHPPYLTMAL GAGSVTPMQLASAYAVFANGGYRVNPYLITRVTDHKGRILSDFQPPAVTDNPRAIEPR NAFIMNSMLQEVARSGTAARAQATLKRPDIYGKTGTTNDAVDAWFAGFQPTLAAVTWI GYDTPRNLGSRETGGGLSLPVWISFMEKALKGVPVAEPTVPAGVVNVSGEWFYEEYAR NAGVASVGMESAAPTDGAPAPGTPPPPEERNRILDLFRN" sig_peptide complement(727453..727566) /locus_tag="Dtpsy_0698" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.984) with cleavage site probability 0.577 at residue 38" gene 727874..728944 /locus_tag="Dtpsy_0699" /db_xref="GeneID:7384204" CDS 727874..728944 /locus_tag="Dtpsy_0699" /note="TIGRFAM: type IV pilus assembly protein PilM; KEGG: ajs:Ajs_0730 type IV pilus assembly protein PilM" /codon_start=1 /inference="protein motif:TFAM:TIGR01175" /transl_table=11 /product="type IV pilus assembly protein PilM" /protein_id="YP_002552178.1" /db_xref="InterPro:IPR005883" /db_xref="GI:222109914" /db_xref="GeneID:7384204" /translation="MGSLFSRQSAPLLGVDISSSSVKLVELGRDKGGALVLECCAIEQ LERGWITDGNIEKFDEVAEALRRVVKKSGTKTKNVALALPSSAVITKRITLPGGMSEQ ELEVQVESQANQYIPFSLDEVSLDFCVVGPSKSAPGDVDVLIAASRKEKVQDRQGLAE AAGLKPVVVDIESHAARLAAGRLIEGLPNRGADAVVALFEVGAMTTSMQVIRNDDVLY ERDQAFGGAQLTQLIVRQYGFSQEEAEGKKRNGDLPEDYQSAVLRPFVDSLSQEISRA LQFFFTSTPYNRVDHIMLAGGSAPLPGLTESVIQNTGFACSVINPFDGMEVGGGVRLK KMVREAPSYLTSCGLAMRRFLQ" gene 728941..729552 /locus_tag="Dtpsy_0700" /db_xref="GeneID:7384205" CDS 728941..729552 /locus_tag="Dtpsy_0700" /note="PFAM: Fimbrial assembly family protein; KEGG: ajs:Ajs_0731 fimbrial assembly family protein" /codon_start=1 /inference="protein motif:PFAM:PF05137" /transl_table=11 /product="Fimbrial assembly family protein" /protein_id="YP_002552179.1" /db_xref="InterPro:IPR007813" /db_xref="GI:222109915" /db_xref="GeneID:7384205" /translation="MILINLLPHREAARKRRREAFQAVMLASALVGLAIAAAIYWWFQ MMITDQQDRNNFLRSEIGVLEGQIKEIATIEEEIAALQARQKAVEDLQSDRNLPVHLL NELVAQLPDGVYITSLKQIDQTVTMQGMAQSNERVSEMLRNLANNTPWFSKPELVEIV AANVALTPKDQRRVASFNLRFRLVRSAEAQKAMEAASAVAARK" sig_peptide 728941..729051 /locus_tag="Dtpsy_0700" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.937) with cleavage site probability 0.673 at residue 37" gene 729554..730228 /locus_tag="Dtpsy_0701" /db_xref="GeneID:7384206" CDS 729554..730228 /locus_tag="Dtpsy_0701" /note="PFAM: Pilus assembly protein PilO; KEGG: ajs:Ajs_0732 pilus assembly protein, PilO" /codon_start=1 /inference="protein motif:PFAM:PF04350" /transl_table=11 /product="Pilus assembly protein PilO" /protein_id="YP_002552180.1" /db_xref="InterPro:IPR007445" /db_xref="GI:222109916" /db_xref="GeneID:7384206" /translation="MAKKNKPKLDFAKLQGDLQRQFHNLDPKDPSLWPVLPRALLCAL IAAGVATFLWFFKLTEYEQELTAERNTEQTLREDYQKKLVKAVSLEALKKQREQIQQY VIQLEKQLPSKAEMSALLSDINQAGLGRSLQFELFRPGQIVIKDYYAELPIAIRVAGK YHDMGAFASDVANLSRIVTLNNLAITPISKDAAGNLTLEATARTFRYLDPEEIQAQKA AKGGKK" gene 730225..730776 /locus_tag="Dtpsy_0702" /db_xref="GeneID:7384207" CDS 730225..730776 /locus_tag="Dtpsy_0702" /note="PFAM: Pilus assembly protein PilP; KEGG: ajs:Ajs_0733 pilus assembly protein, PilQ" /codon_start=1 /inference="protein motif:PFAM:PF04351" /transl_table=11 /product="Pilus assembly protein PilP" /protein_id="YP_002552181.1" /db_xref="InterPro:IPR007446" /db_xref="GI:222109917" /db_xref="GeneID:7384207" /translation="MKRITALIALSAVFALAGCGPSGEEELRQWMSELRATTKPRITP LKEPKQFFPQDYVSDSGIDPFNSMKLTLALRRDSAESAANASLIAPEMARRKEPLEAY PLDAIRMVGSMNKAGIPTALISVDKLLYQVRAGNYLGQNYGKIVGITETNMRLREIVQ DPTGDWVERMTTLDLQEGNEVKK" sig_peptide 730225..730299 /locus_tag="Dtpsy_0702" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.715 at residue 25" gene 730773..732863 /locus_tag="Dtpsy_0703" /db_xref="GeneID:7384208" CDS 730773..732863 /locus_tag="Dtpsy_0703" /note="TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB short domain; KEGG: ajs:Ajs_0734 type IV pilus secretin PilQ" /codon_start=1 /inference="protein motif:TFAM:TIGR02515" /transl_table=11 /product="type IV pilus secretin PilQ" /protein_id="YP_002552182.1" /db_xref="InterPro:IPR001775" /db_xref="InterPro:IPR004845" /db_xref="InterPro:IPR004846" /db_xref="InterPro:IPR005644" /db_xref="InterPro:IPR011662" /db_xref="InterPro:IPR013355" /db_xref="GI:222109918" /db_xref="GeneID:7384208" /translation="MIQEKLRLHAYWRMLGAAVVAALTVSVAQARGSIDSISGFLQGG AEVLRIEFSEPQAELPTGFSIQNPARIALDFPGVSNGTGRSSIDINQGNVKSANIVQA GARARVVLNLKQPTSYRAELQGKTVLVLLDAASSAAKMPPPQVTTFAESQNIDNLPLK DLDFRRGTDGAGRIVVGLPNNQVGVDLQQQGKGLIVDFLRSSLPEGLRRKLDVSDFGT PVQTITASQQGERVRLTIDPVGEWEHSAYQSDNQFVVEVRPKKVDLTKLTQGPAYSGE KLSLNFQNIEVRSLLQVIADFTNFNIVTSDTVTGALTLRLKDVPWDQALQIIMDAKGL GMRKSGTVLWIAPKDEIDERTKKDYEAALAIQKLEPLRTQAFQLNYAKAADMVTQLTM SSQGGSSTSGYSNRFLSDRGSAISEPRTNQLFVTDTSAKLEEVRQLLATLDVPVRQVM IEARIVEARDTFGRSLGVRLGGGSRTGGSAVGGTYDNVAGPTGGSGMSPFVSLPASLS GVSTVGSFALSIFNSNASRFLSLELSAMEADGQGKIVSSPRLITADQTKALIEQGTEY PYSVTAPNGATTIAFKKAVLKLEVTPQITPEGNIILDLDVNKDSRGESTTQGVAIDTK HIKTQVLIENGGTVVIGGIFEMEETNQENKIPVLGDVPVVGNLFKNRTKESTKREMLV FITPKVITDRGPVR" sig_peptide 730773..730865 /locus_tag="Dtpsy_0703" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.998) with cleavage site probability 0.952 at residue 31" gene 732935..734038 /locus_tag="Dtpsy_0704" /db_xref="GeneID:7384209" CDS 732935..734038 /locus_tag="Dtpsy_0704" /note="TIGRFAM: 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase; KEGG: ajs:Ajs_0735 3-dehydroquinate synthase" /codon_start=1 /inference="protein motif:TFAM:TIGR01357" /transl_table=11 /product="3-dehydroquinate synthase" /protein_id="YP_002552183.1" /db_xref="InterPro:IPR002658" /db_xref="InterPro:IPR016037" /db_xref="GI:222109919" /db_xref="GeneID:7384209" /translation="MAKMATVQIELGDRGYAIYIGNGLLENAGTYKGLPAAYAALIVS NTSVAPLYAQRLRNALRMQYAQLHEVVLPDGESHKDWHTLNLIFDGLLQHGCDRRTVL FALGGGVIGDMTGFAAACYMRGVPFVQVPTTLLAQVDSSVGGKTAINHPLGKNMIGAF YQPQLVVCDLDTLDTLPARELAAGLAEVIKYGPIADMELFAWLEAHMDALVARERGAL AHVVKRSCEIKAAVVGADEREAGLRAILNFGHTFGHAIEAGMGYGVWLHGEGVAAGMV MAAHLSQRLGLVDGSFVERLTRLIERAGLPTRGPVLDAQDNAGRYLELMRVDKKAEGG EIRFVLIDGPGKAIMRAAPDALVREVIDQCCAS" gene 734114..735268 /locus_tag="Dtpsy_0705" /db_xref="GeneID:7384210" CDS 734114..735268 /locus_tag="Dtpsy_0705" /note="KEGG: ajs:Ajs_0736 deoxyguanosinetriphosphate triphosphohydrolase-like protein; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region" /codon_start=1 /inference="protein motif:TFAM:TIGR01353" /transl_table=11 /product="deoxyguanosinetriphosphate triphosphohydrolase" /protein_id="YP_002552184.1" /db_xref="InterPro:IPR003607" /db_xref="InterPro:IPR006261" /db_xref="InterPro:IPR006674" /db_xref="GI:222109920" /db_xref="GeneID:7384210" /translation="MASYACHSACTQGRRHPEAPAPTLTEYQRDRDRIVHSTAFRRLV YKTQVFLNHEGDLFRTRLTHSLEVAQLGRSIARSLRLNEDLVEAICLAHDLGHTPFGH AGQDALNECMADHGGFEHNLQSLRVVDTLEDRYPAYDGINLTYETREGILKHCSRRNA EQLEAREPGGVGRRFLLGQQPSLEAQLCNLADEMAYNAHDIDDGVRSGLITLEQLRDV PLFDRYRAQAQNDYPHLAQSEGRRRLLSEAIRRMLSEQVYDVIDATRAALAEHAPADV EAVRRLPALVGFSQAMRAQSQVLKRFLFQSLYRHPQVMQTTDRARQVVRDLFAIYQAD PREMPPVQAGWALDGDDARRARTVADFIAGMTDRFAAREHERLTGQRLLA" gene 735357..735974 /locus_tag="Dtpsy_0706" /db_xref="GeneID:7384211" CDS 735357..735974 /locus_tag="Dtpsy_0706" /note="PFAM: protein of unknown function DUF1415; KEGG: ajs:Ajs_0737 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF07209" /transl_table=11 /product="protein of unknown function DUF1415" /protein_id="YP_002552185.1" /db_xref="InterPro:IPR009858" /db_xref="GI:222109921" /db_xref="GeneID:7384211" /translation="MPDQPCEDAAACDDNVVVADMVRWLERAVIGLNLCPFAKSVHVK DQIHYVVSHATDARELLQDLAAELEALAEASPEKRDTTLLIAPLAMPDFLDFNDFLEL ADELVESMDLAGILQVASFHPHFQFEGTLADDVTNCTNRAPYPTLHLLREESIDRAVE VFPEAQEIFERNIELLERLGAAGWADLDVGPHWPVGAPAKGAPQV" gene 735971..736900 /locus_tag="Dtpsy_0707" /db_xref="GeneID:7384212" CDS 735971..736900 /locus_tag="Dtpsy_0707" /note="KEGG: aav:Aave_1006 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Aave_1006" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002552186.1" /db_xref="GI:222109922" /db_xref="GeneID:7384212" /translation="MSRSTTTGQPHRSARAKSGTQQTGAADAAVLAELRPGQSVELLK ELHILTREGRLNQDSRRKLKQVYHLYQFIEPLLAELSADGHAPLLADHGAGKSYLGFI LYDLFFKQLGRGEIYGIEWRAELVQRSRELAQRLGFARMHFLDMAVADAAGAAELPER FDIVTALHACDTATDDAIAFGLRKQARAMVLVPCCQAEVAACLRGTKALSLSRTPLAE LWRHPIHTREMGSQITNVLRCLHLEASGYQVTVTELVGWEHSMKNELILARYTGQKKR SARERLAAILEEFGLAQALGSRFGLDDAGSVAV" gene 736983..737684 /locus_tag="Dtpsy_0708" /db_xref="GeneID:7384213" CDS 736983..737684 /locus_tag="Dtpsy_0708" /note="PFAM: protein of unknown function DUF1568; KEGG: ajs:Ajs_0740 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF07605" /transl_table=11 /product="protein of unknown function DUF1568" /protein_id="YP_002552187.1" /db_xref="InterPro:IPR011462" /db_xref="GI:222109923" /db_xref="GeneID:7384213" /translation="MARLPRLALAGYPHHIIQRGNNRQPIFLDAADRELMWSLLVEHA RQQQVAVHAYVLMDNHFHLLATPQEGKSLPLMMQAVGRSYVRRFNQRHGRSGTLWEGR YRSAVLQAERYLLPCMAYLDLNPVRAGLCAAAADFRWSSHGHYIGLRSDRLITPHALY WALGNTPFARDAAYAALVQAGISASEQAALTQSGLNGWALGDDGFVQALQQLTPRRLT RARAGRPASVVPPKP" gene 737866..742599 /locus_tag="Dtpsy_0709" /db_xref="GeneID:7384214" CDS 737866..742599 /locus_tag="Dtpsy_0709" /EC_number="1.4.7.1" /note="PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: ajs:Ajs_0741 glutamate synthase (NADH) large subunit" /codon_start=1 /inference="protein motif:PRIAM:1.4.7.1" /transl_table=11 /product="Glutamate synthase (ferredoxin)" /protein_id="YP_002552188.1" /db_xref="InterPro:IPR000583" /db_xref="InterPro:IPR002489" /db_xref="InterPro:IPR002932" /db_xref="InterPro:IPR006982" /db_xref="GI:222109924" /db_xref="GeneID:7384214" /translation="MTKAAEIQHLQQHGLYASSNEHDACGLGFVAHIKGVKRHDIVTG ALKILENLDHRGAVGADKLMGDGAGILIQIPDQLYREEMARQGVELPPAGEYGVGMIF LPKEHASRLACEQEMERAIKAEGQVLLGWRDVPVNLDMPMSPTVREKEPILRQVFIGR GSDVIVQDALERKLYVIRKTASAAIQGLKLKHSKEYYVPSMSSRTVVYKGLLLADQVG VYYKDLADERCVSAIGLVHQRFSTNTFPEWPLAHPYRYVAHNGEINTVRGNYNWMLAR EGVMASPVLGEDLKKLYPISFAGQSDTATFDNCLELLTMAGYPISQAVMMMIPEPWEQ HESMDERRRAFYEYHAAMIEPWDGPASIVFTDGRQIGATLDRNGLRPSRYVVTDDDLV ILASEAGVLPVPDGKIVRKWRLQPGKMLLIDLEQGRLIEDDELKANIVNTKPYKQWIE NLRIKLDDVKVGESAVQPAASALPLLDRQQAFGFTQEDIKFLLAPMAKNGEEGVGSMG NDSPLAVLSDKNKPLYNYFRQMFAQVTNPPIDPIREAIVMSLVSFVGPKPNLLDINQV NPPMRLELHQPILDFEGMAKLRQIEQHTHGKFKSATIDITYPLAWGKQGVEAKLASLC AQAVDEIKGGANILIISDRNLSATQVAIPALLALSAIHQHLVREGLRTTAGLVVETGT AREVHHFAVLAGYGAEAVHPYLALETLVDMHQELSGDLSADKAIYNYVKAVGKGLSKI MSKMGVSTYMSYCGAQLFEAVGLNSDTVQKYFTGTASRVEGIGVFEIAEEAIRTHLAA FSDDPVLETMLDAGGEYAWRARGEEHMWTPDAIAKLQHSTRANNFSTYKEYAQIINDQ AKRHMTLRGLFEFKFDPAKAIPVEEVEPAKDIVKRFATGAMSLGSISTEAHATLAVAM NRIGGKSNTGEGGEDPKRYRNELKGIPIQQGETLSSIIGSDKVQADIPLLNGDSLRSK IKQVASGRFGVTAEYLASSDQIQIKMAQGAKPGEGGQLPGGKVSDYIGALRHSVPGVG LISPPPHHDIYSIEDLAQLIHDLKNVAPHADISVKLVSEVGVGTIAAGVAKCKSDHVV IAGHDGGTGASPWSSIKHAGSPWEIGLAETQQTLVLNRLRGRIRVQADGQMKTGRDVV IGALLGADEFGFATAPLVVEGCIMMRKCHLNTCPVGVATQDPLLRAKFSGKPEHVVNY FFFIAEEVRQIMAQLGVRSFNELIGRTDLLDTRKGIEHWKAQGLDFSRLFAQPLVGPE VARYHVESQDHALEKSLDVKLIERCKPAIERGESVRIMEVAKNVNRSVGAMLSGAVTK VHPEGLPDDTVRIHFEGTGGQSFGAFLCKGVTLNLTGEANDYTGKGLSGGRVIVRPSH EFRGEAVGNTIVGNTVMFGATSGEAFFAGVAGERFAVRLSGATAVVEGVGDHGCEYMT GGTVVVLGKTGRNFAAGMSGGIAYVYDEDGKFDSRCNLSMVTLERILPGEEQAVHMGR GIWHRDQTDEALLKKLLEDHSRWTGSKRAREILDNWAASRSKFVKVFPTEYKRALSEI YERKVLEEQATPAVAAPKTEAVAAK" gene 742663..744141 /locus_tag="Dtpsy_0710" /db_xref="GeneID:7384215" CDS 742663..744141 /locus_tag="Dtpsy_0710" /note="TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ajs:Ajs_0742 glutamate synthase subunit beta" /codon_start=1 /inference="protein motif:TFAM:TIGR01317" /transl_table=11 /product="glutamate synthase, NADH/NADPH, small subunit" /protein_id="YP_002552189.1" /db_xref="InterPro:IPR000103" /db_xref="InterPro:IPR000759" /db_xref="InterPro:IPR001327" /db_xref="InterPro:IPR006005" /db_xref="InterPro:IPR013027" /db_xref="GI:222109925" /db_xref="GeneID:7384215" /translation="MGKTTGFMEYERIEEGYKPVGERLKHYKEFVIGLDDAQAKLQGA RCMDCGTPFCNNGCPVNNIIPDFNDLVYHQDWKSAIAVLHSTNNFPEFTGRICPAPCE AACTLNINDDAVGIKSIEHAIIDRAWEHGWVQPQPAARKTGKKVAVVGAGPAGLAAAQ QLARAGHDVTLFEKNDRVGGLLRYGIPDFKLDKAHIDRRVEQLVAEGVTIRTGVFIGA AKDGLGKGSKVTNWSKETITPEQLRKDFDAVLLTGGAEQSRDLPVPGRELDGIHFAME FLPQQNKVNAGDKLKGQIRADGKHVIVIGGGDTGSDCVGTSNRHGAASVTQFELMPMP PSQENKPLVWPYWPYKLRTSSSHEEGCERAFAIATKEFIGDGKKVTGLKTVQVEFKDG KFIEVPGTEKEYQADLVLLAMGFVSPVAAVLDAFGVDKDARGNAQATTDFTGGYATSA PKVFAAGDMRRGQSLVVWAIREGRQAARAVDEFLMGESSLPR" gene 744459..745259 /locus_tag="Dtpsy_0711" /db_xref="GeneID:7384216" CDS 744459..745259 /locus_tag="Dtpsy_0711" /note="PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; extracellular solute-binding protein family 3; KEGG: ajs:Ajs_0743 extracellular solute-binding protein" /codon_start=1 /inference="protein motif:PFAM:PF00497" /transl_table=11 /product="extracellular solute-binding protein family 3" /protein_id="YP_002552190.1" /db_xref="InterPro:IPR001320" /db_xref="InterPro:IPR001638" /db_xref="GI:222109926" /db_xref="GeneID:7384216" /translation="MKKFAAVALLTLGAVLVGCSKQEPAAPAAAPAPAPAAVTKIVVG LDDNFPPMGFRDEKNELVGFDIDMAKEAAKRLGVEVEFKPIDWSAKEAELSGKRVDAL WNGLTITEERKQNILFTAPYMENHQIIVVPAGSVIKAKADLAGKVVGAQEGSSAVDAI KKEEAVFKSFKELKTFGDNVTALMDLTTGRLEAVVVDEVVGRYYVAKKPDQYAVLDDN FGTEEYGVGVRKDDTELHGKLDKALADMKQDGSAAKIAEQWFGKNIIK" sig_peptide 744459..744527 /locus_tag="Dtpsy_0711" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.993) with cleavage site probability 0.421 at residue 23" gene 745419..746072 /locus_tag="Dtpsy_0712" /db_xref="GeneID:7384217" CDS 745419..746072 /locus_tag="Dtpsy_0712" /note="TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_0744 polar amino acid ABC transporter, inner membrane subunit" /codon_start=1 /inference="protein motif:TFAM:TIGR01726" /transl_table=11 /product="polar amino acid ABC transporter, inner membrane subunit" /protein_id="YP_002552191.1" /db_xref="InterPro:IPR000515" /db_xref="InterPro:IPR010065" /db_xref="GI:222109927" /db_xref="GeneID:7384217" /translation="MDYVLSLLGPLAQGAAVTLKLFAITLVLAVPLGLVLALARVSRF APLSAAVNGYIWLMRGTPLMLQMLFIYFALPFVPVIGVRLPDFPAAVAAFALNYAAYF AEIFRAGIQSVDRGQYEAAKVLGMSYGQTMRRIVLPQMVRSILPPMSNETITLVKDTS LIYVLALNDLLRAARGIVQRDFTTTPFIVAAAFYLVMTLVLTWGFQRLEKRYAKFDQ" gene 746053..746835 /locus_tag="Dtpsy_0713" /db_xref="GeneID:7384218" CDS 746053..746835 /locus_tag="Dtpsy_0713" /note="PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_0745 ABC transporter related" /codon_start=1 /inference="protein motif:PFAM:PF00005" /transl_table=11 /product="ABC transporter related" /protein_id="YP_002552192.1" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR017871" /db_xref="GI:222109928" /db_xref="GeneID:7384218" /translation="MPSLTSDATQMIEARDVRKAFGHVQVLRGVSLSVHRGEVVAVIG PSGSGKSTFLRCLNHLETIDSGHIAIEGETLATTDAQGRCAYVSDAEVRRIGAKTGMV FQHFNLFPHLTVLENLIEAPMVVQGLARDAAIARAEALLDKVGLAQKRDNYPSRLSGG QKQRVAIARALCMEPDIMLFDEPTSALDPELTGEVLRTMRELAEERMTMLVVTHEMGF AREVANTVAFMDQGELIAARPAGEFFADPGHERARAFLQHML" gene complement(747028..747990) /locus_tag="Dtpsy_0714" /db_xref="GeneID:7384219" CDS complement(747028..747990) /locus_tag="Dtpsy_0714" /note="PFAM: Spermine synthase; protein of unknown function DUF752; KEGG: ajs:Ajs_0746 spermidine synthase" /codon_start=1 /inference="protein motif:PFAM:PF01564" /transl_table=11 /product="Spermine synthase" /protein_id="YP_002552193.1" /db_xref="InterPro:IPR001045" /db_xref="InterPro:IPR008471" /db_xref="GI:222109929" /db_xref="GeneID:7384219" /translation="MSGALTAQATRYVAERLNADFGFYLSDRRLLAERQSAWQHIEVF DNPQFGRVMRIDGCFMTSERDEFFYHEPMVHLPAIAHPGVRRALVVGGGDGGAAKELL KLPGVEQVVLAELDGEVIAMARDWLGQIHRGAFDDPRLEVRLGDARAFIGQTEERFDQ IVLDLTDPFGPAVELYTVEFYAACRRALNPGGVLSLHLGSPVHLPESLGRIAASVRAV FPIFRPYLQYVPLYGTLWCMGMASDSTDPARLSADEVDARIAARGLGDLQLYNGAVHH ALLAQPNFVRALLDRPALPLHSGDVLEEVRDPAELPQVVVSAAA" gene complement(747990..748400) /locus_tag="Dtpsy_0715" /db_xref="GeneID:7384220" CDS complement(747990..748400) /locus_tag="Dtpsy_0715" /note="TIGRFAM: S-adenosylmethionine decarboxylase proenzyme; PFAM: S-adenosylmethionine decarboxylase related; KEGG: ajs:Ajs_0747 S-adenosylmethionine decarboxylase related" /codon_start=1 /inference="protein motif:TFAM:TIGR03330" /transl_table=11 /product="S-adenosylmethionine decarboxylase proenzyme" /protein_id="YP_002552194.1" /db_xref="InterPro:IPR003826" /db_xref="InterPro:IPR017716" /db_xref="GI:222109930" /db_xref="GeneID:7384220" /translation="MKNLQSVVPIPAPVPQRQATGLHLIGDLYGCLCDSRLMLDAAHL ESFCKERVAAAGLTTVGSLFHSFGEGGGVTGVVVLAESHLSIHTWPEAGYVTLDVYVC NYTENNRPKAQKLFDDLQAAFNPADPHLHRVDRA" gene 748764..749624 /locus_tag="Dtpsy_0716" /db_xref="GeneID:7384221" CDS 748764..749624 /locus_tag="Dtpsy_0716" /note="PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_0748 ABC transporter related" /codon_start=1 /inference="protein motif:PFAM:PF00005" /transl_table=11 /product="ABC transporter related" /protein_id="YP_002552195.1" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR017871" /db_xref="GI:222109931" /db_xref="GeneID:7384221" /translation="MSSPLSSPGDALVELRNVTFGYGERVILRDLSLAVPRGKVTALM GASGGGKTTVLRLIGGQQRAQQGEVLVGGQDVGRMDTAQLYAARRRMGMLFQFGALFT DMSVYENVAFPLREHTDLPEDLIRDIVLMKLHAVGLRGARDLMPSQISGGMARRVALA RAIALDPELIMYDEPFAGLDPISLGTAAQLIRQLNDAMGLTTIVVSHDLEETFRLADH VIILGPGTVAAQGTPEEVRASTDPLVHQFVHALPTGPVPFHYPGPSVADDFGPLRSPS VDAHASGGTP" gene 749621..750403 /locus_tag="Dtpsy_0717" /db_xref="GeneID:7384222" CDS 749621..750403 /locus_tag="Dtpsy_0717" /note="PFAM: protein of unknown function DUF140; KEGG: ajs:Ajs_0749 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF02405" /transl_table=11 /product="protein of unknown function DUF140" /protein_id="YP_002552196.1" /db_xref="InterPro:IPR003453" /db_xref="GI:222109932" /db_xref="GeneID:7384222" /translation="MSWWRPTHVGYAVRTKLADVGMGARLFARLLGLFGDVMRRPGLV RDQVHFLGNYSLSIIAMSGLFVGFVLALQGYNVLQLYGSANSLGLVVTLGLVRELGPV VTALLFAGRAGTSLTAEIGLMRAGEQLSAMEMMAVDPVRRILAPRFWGGVIAMPLLAL VFNAVGVIGGWLVGVVLIGVDGGAFWGQMQSGVDVWKDVGNGIVKSLAFGVAVTFIAV LQGFVAKPTPEGVSRATTRTVVMASLSVLGLDFVLTALMFSI" gene 750438..750923 /locus_tag="Dtpsy_0718" /db_xref="GeneID:7384223" CDS 750438..750923 /locus_tag="Dtpsy_0718" /note="PFAM: Mammalian cell entry related domain protein; KEGG: ajs:Ajs_0750 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF02470" /transl_table=11 /product="Mammalian cell entry related domain protein" /protein_id="YP_002552197.1" /db_xref="InterPro:IPR003399" /db_xref="GI:222109933" /db_xref="GeneID:7384223" /translation="MQHSKNDFWVGLFVLLGGAALVFLALQSANLLNLNFRSGYTVTA RFDNIGGLKPKAAVRSAGVVVGRVQSIGFDDTTYQARVTLELEKRYVFPKDSSLKILT SGLLGDQYIGIEPGADENNLAEGDMVTATQSAVVLENLIGQFLYGKAEEGASSNGGTK K" sig_peptide 750438..750524 /locus_tag="Dtpsy_0718" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.961) with cleavage site probability 0.717 at residue 29" gene 750920..751672 /locus_tag="Dtpsy_0719" /db_xref="GeneID:7384224" CDS 750920..751672 /locus_tag="Dtpsy_0719" /note="PFAM: VacJ family lipoprotein; KEGG: ajs:Ajs_0751 VacJ family lipoprotein" /codon_start=1 /inference="protein motif:PFAM:PF04333" /transl_table=11 /product="VacJ family lipoprotein" /protein_id="YP_002552198.1" /db_xref="InterPro:IPR007428" /db_xref="GI:222109934" /db_xref="GeneID:7384224" /translation="MTNQPRFTGWTARWAALLLGAALMSGCATGPNANPADPFEPFNR GVHSFNDSVDKAVLKPVATVYRDVTPQPVRTGVSNFFGNLGDAWSFVNNLLQFRGLEA YESLVRFTTNTFFGLGGVLDIASEAGIERHKQDFGLTLGRWGVPTGPYLVLPLLGPST VRDTAALPVDSWGNPLGQLDPVEVRNSLYGLRLVDQRASLLRAGSVLDTAALDPYSFT RDVYLKVRSGVSGARDEDAYEENGGKLPDDAY" sig_peptide 750920..751021 /locus_tag="Dtpsy_0719" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.978 at residue 34" gene 751851..752498 /locus_tag="Dtpsy_0720" /db_xref="GeneID:7384225" CDS 751851..752498 /locus_tag="Dtpsy_0720" /note="PFAM: toluene tolerance family protein; KEGG: ajs:Ajs_0752 toluene tolerance family protein" /codon_start=1 /inference="protein motif:PFAM:PF05494" /transl_table=11 /product="toluene tolerance family protein" /protein_id="YP_002552199.1" /db_xref="InterPro:IPR006311" /db_xref="InterPro:IPR008869" /db_xref="GI:222109935" /db_xref="GeneID:7384225" /translation="MMNRRTLIHAAAAMAVATWVAVPQAALAADEAPDALVKRLSVDV LETLRKDKSIKAGDVDRIMALVDKTILPHVNFRRMTAASVGPGWRKATPEQQARLQDE FKTLLVRTYAGALSQVTDQSIVVKPLRAAAEDKDVLVRTEIRGRGDPIQLDYRLEKTP GEGAGWKIYNLNVLGVWLVETYRSQFAQEINAKGVDGLIEALVARNKANAASSAK" sig_peptide 751851..751937 /locus_tag="Dtpsy_0720" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.995 at residue 29" gene 752535..752804 /locus_tag="Dtpsy_0721" /db_xref="GeneID:7384226" CDS 752535..752804 /locus_tag="Dtpsy_0721" /note="KEGG: ajs:Ajs_0753 sulfate transporter/antisigma-factor antagonist STAS" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0753" /transl_table=11 /product="sulfate transporter/antisigma-factor antagonist STAS" /protein_id="YP_002552200.1" /db_xref="InterPro:IPR002645" /db_xref="GI:222109936" /db_xref="GeneID:7384226" /translation="MLVLPAELTHRHAGATLRMLLQGLKAQDESLVVVDAGALTAFDS SALAVLLECRRAAVFENRGFVVKALPPALSSLAGLYGVQELLPAL" gene 752902..753819 /locus_tag="Dtpsy_0722" /db_xref="GeneID:7384227" CDS 752902..753819 /locus_tag="Dtpsy_0722" /note="PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_0755 ABC transporter related" /codon_start=1 /inference="protein motif:PFAM:PF00005" /transl_table=11 /product="ABC transporter related" /protein_id="YP_002552201.1" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR017871" /db_xref="GI:222109937" /db_xref="GeneID:7384227" /translation="MPAVSFQSISKSFSTPRGPFQALQDVSLDIEEGEFFGLLGPNGA GKTTLISILAGLARATSGRVSVLGHDVQTQFAAARRLLGVVPQELVFDPFFNVRETLR IQSGYFGVKNNDVWIDELLENLGLADKATANMRQLSGGMKRRVLVAQALVHKPPIIVL DEPTAGVDVELRQTLWQFVARLNKQGHTVLLTTHYLEEAEALCTRLAMLKRGRVVALA RTSELLQAASTNVLRFKTDDTLPADLAALARVTGRVAQLPAQDAQEIEQLLARLRAAG VRVEDVEIRKADLEDVFLNVMAAEQEEHA" gene 753816..754571 /locus_tag="Dtpsy_0723" /db_xref="GeneID:7384228" CDS 753816..754571 /locus_tag="Dtpsy_0723" /note="PFAM: ABC-2 type transporter; KEGG: ajs:Ajs_0756 ABC-2 type transporter" /codon_start=1 /inference="protein motif:PFAM:PF01061" /transl_table=11 /product="ABC-2 type transporter" /protein_id="YP_002552202.1" /db_xref="InterPro:IPR000412" /db_xref="InterPro:IPR013525" /db_xref="InterPro:IPR013526" /db_xref="GI:222109938" /db_xref="GeneID:7384228" /translation="MIGWQTLFYKEVLRFWKVGFQTVAAPVLTAVLYLLIFGHVLEDH VKVYDRLSYTAFLVPGLVMMSVLQNAFANSSSSLIQSKIMGSLVFVLLTPLSHRAWFA AYVGSSMVRGLVVGLGVFIVTLAFATPQFAAPLWILAFALLGAALLATLGVIAGLWAD KFDQMAAFQNFIIVPMTFLSGVFYSVQSLPPFWQGASHLNPFFYMIDGFRYGFFGVSD VSPWLSLGVVGLAWALVSLLALHLLRTGYKIRN" gene 754573..754821 /locus_tag="Dtpsy_0724" /db_xref="GeneID:7384229" CDS 754573..754821 /locus_tag="Dtpsy_0724" /note="PFAM: BolA family protein; KEGG: ajs:Ajs_0757 BolA family protein" /codon_start=1 /inference="protein motif:PFAM:PF01722" /transl_table=11 /product="BolA family protein" /protein_id="YP_002552203.1" /db_xref="InterPro:IPR002634" /db_xref="GI:222109939" /db_xref="GeneID:7384229" /translation="MTADQLKDIISAGMACDHITLEGDGRHWYATIVSSEFEGKRSIQ RHQRVYATLGARMQSDEVHALSMKTFTPAEWAQAQAGD" gene 755043..756365 /locus_tag="Dtpsy_0725" /db_xref="GeneID:7384230" CDS 755043..756365 /locus_tag="Dtpsy_0725" /note="TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); KEGG: ajs:Ajs_0758 UDP-N-acetylglucosamine 1-carboxyvinyltransferase" /codon_start=1 /inference="protein motif:TFAM:TIGR01072" /transl_table=11 /product="UDP-N-acetylglucosamine 1-carboxyvinyltransferase" /protein_id="YP_002552204.1" /db_xref="InterPro:IPR001986" /db_xref="InterPro:IPR005750" /db_xref="GI:222109940" /db_xref="GeneID:7384230" /translation="MDKLLIRGGRPLVGEVPISGAKNAALPELCAALLTADPVTLHNV PRLQDVATMLRLIRNMGVQVDRIANPDCSVADAAGIVRLDAGALSTPEAPYDLVKTMR ASVLALGPLLARFGEATVSLPGGCAIGSRPVDQHIKGLQAMGAQIVVEHGYMIARLPQ GCTRLRGARITTDMVTVTGTENLLMAATLAEGETVLENAAQEPEVADLAEMLIKMGAR IEGHGTSRIRIQGVERLHGCEHAVVADRIEAGTFLCAVAATGGDALLRHGRADHLDAV IDKLRDAGVQVAPEEGGIRVRSPGAAQLKAQGFRTTEYPGFPTDMQAQFMALNVVAQG TATVAETIFENRFMHVNELLRLGAKIQTTDGRVAVIEGLGGAAPAGARLSGATVMATD LRASASLVIAGLVADGETLVDRIYHLDRGYDCMEAKLRGLGADIERIQ" gene 756362..757012 /locus_tag="Dtpsy_0726" /db_xref="GeneID:7384231" CDS 756362..757012 /locus_tag="Dtpsy_0726" /EC_number="2.4.2.17" /note="KEGG: ajs:Ajs_0759 ATP phosphoribosyltransferase catalytic subunit; TIGRFAM: ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase catalytic region" /codon_start=1 /inference="protein motif:TFAM:TIGR00070" /transl_table=11 /product="ATP phosphoribosyltransferase" /protein_id="YP_002552205.1" /db_xref="InterPro:IPR013820" /db_xref="GI:222109941" /db_xref="GeneID:7384231" /translation="MTQQITLALSKGRIFEETLPLLAAAGIEVLEDPEKSRKLILPTS RPEVRVVLVRATDVPTYVQYGGADLGVAGKDSLIEHGGQGLFRPLDLKIAKCRVSVAV RADFDYREAVTQGSRLKVATKYTSIARDFFASKGVHVDLIKLYGSMELAPLTGLADAI VDLVSTGNTLKANNLVEVEQIMDISSHLVVNQAALKLKQAPLRRIIDAFASAVPQG" gene 757177..758496 /locus_tag="Dtpsy_0727" /db_xref="GeneID:7384232" CDS 757177..758496 /locus_tag="Dtpsy_0727" /EC_number="1.1.1.23" /note="KEGG: ajs:Ajs_0760 histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase; PFAM: histidinol dehydrogenase" /codon_start=1 /inference="protein motif:TFAM:TIGR00069" /transl_table=11 /product="histidinol dehydrogenase" /protein_id="YP_002552206.1" /db_xref="InterPro:IPR001692" /db_xref="GI:222109942" /db_xref="GeneID:7384232" /translation="MQFVAAPVRLSTADDTFEVEFSARLHWSADTDAAIEQRVAGILA DVRERGDAAVLEYTQRFDGLHAQGLPSLELKASELQAAFDGLPAAQRDALTAAAARVR RYHEAQKKANGESWSYRDDDGTLLGQKVTPLDRVGIYVPGGKAAYPSSVLMNAIPAHV AGVQDIIMVVPTPQGTKNPLVLAAAHVAGVTRAFTIGGAQAVAALAYGTQTIPKVDKI TGPGNAYVASAKKHVFGTVGIDMIAGPSEILVLADGSTPAEWVAMDLFSQAEHDELAQ SILLCPDAAYIDQVQSAIDRLLPQMPRAEIIAKSLTGRGALIHTRSMEEACEISNRIA PEHLEVSSREPHRWEPLLRHAGAIFLGAYTSESLGDYCAGPNHVLPTSGTARFSSPLG VYDFQKRSSIIEVSEQGAQSLGRIASVLAHGEGLQGHARAAEMRLKS" gene 758661..759362 /locus_tag="Dtpsy_0728" /db_xref="GeneID:7385328" CDS 758661..759362 /locus_tag="Dtpsy_0728" /note="KEGG: ajs:Ajs_0761 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0761" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002552207.1" /db_xref="GI:222109943" /db_xref="GeneID:7385328" /translation="MKNVTITVDDPVLEWARIEAARRGTSVSRMVGDFLGEMQRREDA YERAYLAWRTDERTWRAGAAARRIHGFERSPAHVGEAPQPLQRSLEQPVFVDTAVLVA AEDGADAALQAPVLACLDLLWRERLGRVSSQVLAEFYDTVTRAASAPMPHGDARAAIR RYHSWTPWQIDAATLETAWALEARHQLAWGDCLALAAAQHSGCASLLSLSLPQGAQYG GVEVLHPLHCALAVP" gene 759401..760507 /locus_tag="Dtpsy_0729" /db_xref="GeneID:7383667" CDS 759401..760507 /locus_tag="Dtpsy_0729" /note="TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; KEGG: ajs:Ajs_0762 histidinol-phosphate aminotransferase" /codon_start=1 /inference="protein motif:TFAM:TIGR01141" /transl_table=11 /product="histidinol-phosphate aminotransferase" /protein_id="YP_002552208.1" /db_xref="InterPro:IPR004839" /db_xref="InterPro:IPR005861" /db_xref="GI:222109944" /db_xref="GeneID:7383667" /translation="MTTPSAELPALARIRDDVRAMQAYVVADATGYLKMDAMENPFGL PPALQAALGQRLGQLALNRYPGTRQNDLKAALAAYAGEPAGSAVLLGNGSDELISLVA LACARAQATVLAPVPGFVMYAMSAQLQGLGFVGVPLTADFELDEAAMLDAIAQHRPAI TFLAYPNNPTATLWDEAVVQRIIDAAGAQGGIVVMDEAYQPFASRSWIERMRAQPERN GHVLLMRTLSKFGLAGVRLGYMIGPAALVAEVDKVRPPYNVSVLNTEAALFALEHADV FAAQADELRAARTELLAALRAMPGIERVWDSQANMVLVRVPDAARAYEGMKARKVLVK NVSTMHPLLAGCLRLTVGSSADNAQMLTALQASL" gene 760504..761136 /locus_tag="Dtpsy_0730" /db_xref="GeneID:7383668" CDS 760504..761136 /locus_tag="Dtpsy_0730" /EC_number="4.2.1.19" /note="PFAM: imidazoleglycerol-phosphate dehydratase; KEGG: ajs:Ajs_0763 imidazoleglycerol-phosphate dehydratase" /codon_start=1 /inference="protein motif:PRIAM:4.2.1.19" /transl_table=11 /product="Imidazoleglycerol-phosphate dehydratase" /protein_id="YP_002552209.1" /db_xref="InterPro:IPR000807" /db_xref="GI:222109945" /db_xref="GeneID:7383668" /translation="MTSSALVPSSAELCPDRTAEVSRTTAETRITVRVNLDGTGAASL HTGIGFFDHMLDQIARHGLIDLQIDCDGDLHIDGHHTVEDVGITLGQAFARAVGDKKG IRRYGHAYVPLDEALSRVVVDFSGRPGLHLHIPFTAGSIGGFDTQLTYEFFQGFVNHA GVTLHIDNLKGINAHHQCETVFKAFARALRAALERDPRAAGVIPSTKGSL" gene 761187..761855 /locus_tag="Dtpsy_0731" /db_xref="GeneID:7383669" CDS 761187..761855 /locus_tag="Dtpsy_0731" /note="TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I; CobB/CobQ domain protein glutamine amidotransferase; KEGG: ajs:Ajs_0764 imidazole glycerol phosphate synthase subunit HisH" /codon_start=1 /inference="protein motif:TFAM:TIGR01855" /transl_table=11 /product="imidazole glycerol phosphate synthase, glutamine amidotransferase subunit" /protein_id="YP_002552210.1" /db_xref="InterPro:IPR000991" /db_xref="InterPro:IPR010139" /db_xref="InterPro:IPR011698" /db_xref="GI:222109946" /db_xref="GeneID:7383669" /translation="MNSEAKTVAVVDYGMGNLRSVSQAVQVAAQGSGFRVMVTAHPDE VRAADRVVLPGQGAMPDCMRELRESGLLESVLEAAASKPLFGVCVGMQMLLDHSAEGD TPGLGLIPGEVLKFDLAGRTQPDGSRYKVPQMGWNRVRQARHGGVAHPVWAGVPDDSY FYFVHSFYARPANPLHCAGEADYGGPFAAAIARDNIFATQFHPEKSAEHGLALYRNFL HWKP" gene 761914..762657 /locus_tag="Dtpsy_0732" /db_xref="GeneID:7383670" CDS 761914..762657 /locus_tag="Dtpsy_0732" /note="TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: histidine biosynthesis protein; KEGG: ajs:Ajs_0765 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase" /codon_start=1 /inference="protein motif:TFAM:TIGR00007" /transl_table=11 /product="phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase" /protein_id="YP_002552211.1" /db_xref="InterPro:IPR006062" /db_xref="InterPro:IPR006063" /db_xref="GI:222109947" /db_xref="GeneID:7383670" /translation="MLLIPAIDLKDGHCVRLKQGDMDQSTTFGEDPAAMARKWADAGA RRLHLVDLNGAFAGQPKNKAAIKAILAEVGADIPVQLGGGIRDLDTIERYIDAGLRYV IIGTAAVKNPGFLKDACSAFGGHIIVGLDAKDGKVATDGWSKLTGHEVVDLARKFQDW GVESIIYTDIGRDGMLSGINIEATVKLAQALTIPVIASGGLAGIADIEKLCEVENEGV EGVICGRAIYSGDLDFAAAQHRADELSLA" gene complement(762703..763773) /locus_tag="Dtpsy_0733" /db_xref="GeneID:7383671" CDS complement(762703..763773) /locus_tag="Dtpsy_0733" /note="KEGG: asa:ASA_0611 hypothetical protein" /codon_start=1 /inference="protein motif:COG:COG1566" /transl_table=11 /product="Multidrug resistance efflux pump-like protein" /protein_id="YP_002552212.1" /db_xref="GI:222109948" /db_xref="GeneID:7383671" /translation="MKINFDAPPTSAQETNGLEVRYAAAKRRVPRWRWYLLLAMVLVA PAYLLVRFGIAYWWESTPAQVVLEQATLRAPAAGRVAFVAAPGAPLEPGQPVMALERT PTDTPAPPAATQRPTPHAQEPAQAQAHTARLALLTEAERLASRRLAIQQERLHTMQGL REQGAATRQEVDNLRFQVLQAEADLSRARADVREQRMLMASVPAAMPAPAAPATPQPP SEEAAPAQPGTALAPFAATAVQALVRPGDWVAQGAEVAVLQRRGEPLVHAYLPPDKAR YAQVGRMATLHFMDGGKVRAKVVGLMMEAQSPPADRVSPLTPRTPSIVVKLQALEPLP APYHIHQLPLDVRFDWVASRWF" gene complement(763770..765884) /locus_tag="Dtpsy_0734" /db_xref="GeneID:7383672" CDS complement(763770..765884) /locus_tag="Dtpsy_0734" /note="KEGG: pzu:PHZ_p0238 metal ion efflux outer membrane factor protein family protein" /codon_start=1 /inference="protein motif:COG:COG1538" /transl_table=11 /product="Outer membrane protein-like protein" /protein_id="YP_002552213.1" /db_xref="GI:222109949" /db_xref="GeneID:7383672" /translation="MFQRSPRHTLIALLACICAGPQGAAAHASPPVSLTQLEDRVRAF APSARLAQADVTVAEQRSAALQAGSGAQLFGGAGVDNAREAVTDTLSRDYQRTQMHLG VRWPLLGTRAAQQRTVDDAQHAVEQSRLRRLQMENEAVLAVRRAYVRHLRSVERIRLA DAFLRVRAEAQEQLASRHAAGVLLEADRLDLGGLFNIVQATHDSQSAARDLARAEIER LTGQPAAAVQTQEPAWPQTCLAPGAAALDRSPAVTLAQQEVDAAQQRQQHARLEGVQA SISLAQSFSRDIGGPTGHSTRVGVDFSLPLQWRSQRDAALAQAQGEIDRAQALLALRR GELEAAAQQALAAYRLRDKEMAGHQHRQQAAAEALRIAQLRLNAFDGDGYSKLLTTRY ALYQAAVQVVDGAERRDLAALDVLALGDGCTLAWHDAPAAPDPWAATVAALAAGTAPT SAKAVPGETGLGWYVWQGQALLDQPAQLDELPPRSHRLLLSFTAAQLQALARPDGRAR WMALRAQAQARQLTLELLLGEPTWVLPHERARLLALVESLRDLPADALHLDLERSQLP AAQQRDWSRHLIDTLQAVRAAAPWPLALTTHYRELQQPGFAARVHAAGVGEVVAMLYV NNPERTATLARPLLSAAPAGLRIAVAQSIESALPAQESSFALGKARSLQRWDALAHQL AGLPGFGGVVVQSWEDYREARP" sig_peptide complement(765804..765884) /locus_tag="Dtpsy_0734" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.532 at residue 27" gene complement(765886..767211) /locus_tag="Dtpsy_0735" /db_xref="GeneID:7383673" CDS complement(765886..767211) /locus_tag="Dtpsy_0735" /note="PFAM: glycosyl transferase family 2; chitin synthase; KEGG: vpa:VPA0393 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF00535" /transl_table=11 /product="glycosyl transferase family 2" /protein_id="YP_002552214.1" /db_xref="InterPro:IPR001173" /db_xref="InterPro:IPR004835" /db_xref="GI:222109950" /db_xref="GeneID:7383673" /translation="MWDTAVFAFATLFASSSQQNWVELALKFFPFVVFLEAPFFLLVT AGMVKYGLREHRPLRQREAYPRVSCVITCYSEGEDVGKTIGSLAQQLYPGFIEIIAVI DGALQNGPTLRAARRAQSLLAGTQRRSLVVLPKWQRGGRVSSLNAGLSIATGEVVMAL DGDTSFDNDMVRNATRHFDDPGVVGVAGNLRVRNAKRSLVTRLQALEYMLSIGAGKTG LSEFNIVNNISGAFGVFRTRFLRNLGGWDAGTAEDLDMTMRIKQYFGRHPDLRIVFDP HAVGHTDAPDTWRVFFRQRLRWDGDMFYIFIRKFRFNLRPRLLGWRNFLFVIVNGLLM QLVLPFLIVAYTGTMLFTMPLGVVMGVLAFIYLAYLAALLFYFLLYVVAVSERPRDDV WYLGFLPLFPLFAFVNRIHCSFSIMAEMFMKSHLDSSMAPWWVLRKTKF" sig_peptide complement(767152..767211) /locus_tag="Dtpsy_0735" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.896) with cleavage site probability 0.676 at residue 20" gene complement(767218..768612) /locus_tag="Dtpsy_0736" /db_xref="GeneID:7383674" CDS complement(767218..768612) /locus_tag="Dtpsy_0736" /note="KEGG: sbn:Sbal195_0447 hypothetical protein" /codon_start=1 /inference="ab initio prediction:Prodigal:1.4" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002552215.1" /db_xref="GI:222109951" /db_xref="GeneID:7383674" /translation="MTVSPSSATPPAESMVVLRPSGQPVPAQPQAQVFDSWDAFTLSS VQPLGFYLEGWDAPAADDLILQLRRSPWWDRLAVVAPGEGEASVLADTAAPYADAVAR AERSLAVRRSLRLALTDMRLEERVLYFLYVRDAMELAPQCTLTHPMLYHYPVVDALAQ RGEDPGACLATLVRRKLLEPAQLVDRTRHCRTCGSAHIHYIDVCPHCSSLQIRKEASL HCFSCGHVAPESDFHHDGGLSCPQCSAALRHIGVDYDRPLTQYACGSCHHVFVETATQ ARCLACRTSCAPSALDVREIASLRLSAHGRTALRAGQIQESFAALDTANYVEAPHFRR MLDWALAVTTRHPEMRFGLMLIEFTNATELIEELGAARVFLLLDEFARRLHELLRTSD ITTRTQEDKLWLFLPFSDPAGLSARLQRALSDQTVAAAPSALQARIRHLQMPQDLRAG DSAAALMERLLDQA" gene 768845..769864 /locus_tag="Dtpsy_0737" /db_xref="GeneID:7383675" CDS 768845..769864 /locus_tag="Dtpsy_0737" /note="TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KR domain protein; KEGG: aav:Aave_1044 UDP-galactose 4-epimerase" /codon_start=1 /inference="protein motif:TFAM:TIGR01179" /transl_table=11 /product="UDP-glucose 4-epimerase" /protein_id="YP_002552216.1" /db_xref="InterPro:IPR001509" /db_xref="InterPro:IPR002198" /db_xref="InterPro:IPR002225" /db_xref="InterPro:IPR003869" /db_xref="InterPro:IPR005886" /db_xref="InterPro:IPR005913" /db_xref="InterPro:IPR008089" /db_xref="InterPro:IPR013120" /db_xref="InterPro:IPR013968" /db_xref="GI:222109952" /db_xref="GeneID:7383675" /translation="MILVTGGAGFIGTHTCAALADAGIPTLLLDNFSNSRRSVLDRLA RITGKPVACVEGDVRDAQLLRQLFASHPIEGVIHFAALKAVGESVREPLRYYENNVAG TVSLLRAMQAAGVRTLVFSSSATVYGDPASLPIREDFPLSATNPYGWSKLMMEQVLAD VDHAEPGQWRIARLRYFNPVGAHESGLIGEDPQDIPNNLMPYVAQVATGQREVLSVYG GDYPTPDGTGVRDYIHVCDLAEGHVAALRYLRAHPGLLTVNLGTGRPVSVLEMVRGFE QASGRAVPYQVVARRPGDVAACWADPAQAERLLGWRARRDVQAMCRDAWRWQDGEARR LGDAP" sig_peptide 768845..768907 /locus_tag="Dtpsy_0737" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.851) with cleavage site probability 0.789 at residue 21" gene 770023..770802 /locus_tag="Dtpsy_0738" /db_xref="GeneID:7383676" CDS 770023..770802 /locus_tag="Dtpsy_0738" /note="TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein; KEGG: ajs:Ajs_0775 imidazole glycerol phosphate synthase subunit HisF" /codon_start=1 /inference="protein motif:TFAM:TIGR00735" /transl_table=11 /product="imidazoleglycerol phosphate synthase, cyclase subunit" /protein_id="YP_002552217.1" /db_xref="InterPro:IPR004651" /db_xref="InterPro:IPR006062" /db_xref="GI:222109953" /db_xref="GeneID:7383676" /translation="MLAKRIIPCLDVTGGRVVKGVNFVELRDAGDPVEIAARYNAQGA DELTFLDITATSDERDLILPIIEAVASQVFIPLTVGGGVRTVEDVRRLLNAGADKTSF NSAAIANPDVISQASAKYGAQCIVVAIDAKRRQGAEVAERGEGWDVYSHGGRKNTGLD AVQWAVEMARRGAGEILLTSMDRDGTKSGFDLQLTRAVSDAVGVPVIASGGVGNLDHL ADGVQQGGADAVLAASIFHYGEFTVRQAKERMRERGIPVRL" gene 770907..771305 /locus_tag="Dtpsy_0739" /db_xref="GeneID:7383677" CDS 770907..771305 /locus_tag="Dtpsy_0739" /EC_number="3.5.4.19" /note="PFAM: phosphoribosyl-AMP cyclohydrolase; KEGG: ajs:Ajs_0776 phosphoribosyl-AMP cyclohydrolase" /codon_start=1 /inference="protein motif:PRIAM:3.5.4.19" /transl_table=11 /product="Phosphoribosyl-AMP cyclohydrolase" /protein_id="YP_002552218.1" /db_xref="InterPro:IPR002496" /db_xref="GI:222109954" /db_xref="GeneID:7383677" /translation="MDTMNWLDQLKWDAQGLVPVIAQEAATGDVLMFAWMNREALAKT AELGRAVYYSRSRGKLWFKGEESGHVQQVHDIRLDCDSDVVLLKVTQLGHEPGIACHT GRHSCFFNALQNGAWQAVDPVLKDPESIYK" gene 771312..771710 /locus_tag="Dtpsy_0740" /db_xref="GeneID:7383678" CDS 771312..771710 /locus_tag="Dtpsy_0740" /note="TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-ATP pyrophosphohydrolase; KEGG: ajs:Ajs_0777 phosphoribosyl-ATP pyrophosphatase" /codon_start=1 /inference="protein motif:TFAM:TIGR03188" /transl_table=11 /product="phosphoribosyl-ATP diphosphatase" /protein_id="YP_002552219.1" /db_xref="InterPro:IPR008179" /db_xref="GI:222109955" /db_xref="GeneID:7383678" /translation="MTRTDTHAPLSQDALARLAGVIESRKPANGGDPDKSYVARLLHK GPDAFLKKVGEEATEVVMAAKDLDHGADKAKLVYEVADLWFHSMIALAHYGLAPADVI AELERREGISGIEEKALRKAAARSSEEGGA" gene 771710..772096 /locus_tag="Dtpsy_0741" /db_xref="GeneID:7383679" CDS 771710..772096 /locus_tag="Dtpsy_0741" /note="KEGG: ajs:Ajs_0778 putative transmembrane protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0778" /transl_table=11 /product="putative transmembrane protein" /protein_id="YP_002552220.1" /db_xref="GI:222109956" /db_xref="GeneID:7383679" /translation="MNNDIVDVEPSERAESLKTVGWVSYILHLIVAVAAVLPGAQPSA ALLIVALVIDLVKKSDAAGTWQASHFSWRVRTVIWAGVLYAVTAPLWLVFFFPGWIAW GLISIWFLYRIVRGMVAMNKGQAIDA" gene 772089..773129 /locus_tag="Dtpsy_0742" /db_xref="GeneID:7383680" CDS 772089..773129 /locus_tag="Dtpsy_0742" /note="PFAM: Patatin; KEGG: ajs:Ajs_0779 patatin" /codon_start=1 /inference="protein motif:PFAM:PF01734" /transl_table=11 /product="Patatin" /protein_id="YP_002552221.1" /db_xref="InterPro:IPR002641" /db_xref="GI:222109957" /db_xref="GeneID:7383680" /translation="MPEQGAPQRLNLALQGGGSHGALTWGVLDALLEDGQFLIDGVSG TSAGAMNAVALAHGFAQAAREHKDPLEAHRAGCELARATLARLWEGVGTLGSLTWGIP LPAAGPLLGMMSHWLSPYQTNPLDINPLRRVLEREVDFEALVSARAPQSTTVPQVFVC ATNVRTGRGEIFTGKRLSADAVMASACLPLLFKAVEIDGEHYWDGGYSGNPALHPLIY KTDCADVLLVQINPIEHQGVPDSASEIMERMNEVTFNAALLSELRAIEFVRRLLAEGK LDARRYKSVRMHRIDGGAVLEPFGAASKLRADLAFVRRLFDLGRAAGQDWLQAHRADV GVRTTVNIADNA" gene 773169..773528 /locus_tag="Dtpsy_0743" /db_xref="GeneID:7383681" CDS 773169..773528 /locus_tag="Dtpsy_0743" /note="PFAM: histidine triad (HIT) protein; KEGG: ajs:Ajs_0780 histidine triad (HIT) protein" /codon_start=1 /inference="protein motif:PFAM:PF01230" /transl_table=11 /product="histidine triad (HIT) protein" /protein_id="YP_002552222.1" /db_xref="InterPro:IPR001310" /db_xref="GI:222109958" /db_xref="GeneID:7383681" /translation="MQHDPNCLFCKIIAGQIPSKKVYEDERVFAFHDIHPWAPVHFLV VPKVHLHSMAAVTPEHADLLGHMMTLAPKLAQEQGCNPYPDGGFRIVVNTGSEGGQEI HHLHMHVIGGPRPWLKG" gene 773624..773872 /locus_tag="Dtpsy_0744" /db_xref="GeneID:7383682" CDS 773624..773872 /locus_tag="Dtpsy_0744" /note="TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: ajs:Ajs_0781 twin arginine-targeting protein translocase" /codon_start=1 /inference="protein motif:TFAM:TIGR01411" /transl_table=11 /product="twin-arginine translocation protein, TatA/E family subunit" /protein_id="YP_002552223.1" /db_xref="InterPro:IPR003369" /db_xref="InterPro:IPR006312" /db_xref="GI:222109959" /db_xref="GeneID:7383682" /translation="MGSFSIWHWLIVLLIVVMVFGTKKLKNIGSDLGGAVKGFKDGMK DGASTDDSATTSAPAGQVTNNSAAADKTTIDVEAKHKS" gene 773905..774384 /locus_tag="Dtpsy_0745" /db_xref="GeneID:7383683" CDS 773905..774384 /locus_tag="Dtpsy_0745" /note="TIGRFAM: twin-arginine translocation protein, TatB subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: ajs:Ajs_0782 sec-independent translocase" /codon_start=1 /inference="protein motif:TFAM:TIGR01410" /transl_table=11 /product="twin-arginine translocation protein, TatB subunit" /protein_id="YP_002552224.1" /db_xref="InterPro:IPR003369" /db_xref="InterPro:IPR003998" /db_xref="GI:222109960" /db_xref="GeneID:7383683" /translation="MIDIGLSKMALIGAVALIVIGPEKLPRVARTVGTLLGKAQRYVA DVKAEVNRSMELDELRKMKDTVENAARDVEQTIHTSASDFQKDMEHSLGDASASGSTY GVDQGLSTVVPAYKHPAKNWRLKRGAMPQWYKARAGVRTRVQSGAARVARFRPQKFH" gene 774447..775235 /locus_tag="Dtpsy_0746" /db_xref="GeneID:7383684" CDS 774447..775235 /locus_tag="Dtpsy_0746" /note="TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: ajs:Ajs_0783 sec-independent protein translocase TatC" /codon_start=1 /inference="protein motif:TFAM:TIGR00945" /transl_table=11 /product="Sec-independent protein translocase, TatC subunit" /protein_id="YP_002552225.1" /db_xref="InterPro:IPR002033" /db_xref="GI:222109961" /db_xref="GeneID:7383684" /translation="MSETPNKEDELAGTEQPFVQHLMELRDRLVKAMIAVGVVAAALF FYPGPGQLYDFLAAPLVAHLPQGATMIATSVISPFMVPLKILLMSAFLVALPFVLWQV WAFVAPGLYSHEKRLVLPLVVSSTVLFFIGVAFCYFFVFGQVFSFIQGFAPKSITAAP DIEAYLGFVMTMFLAFGLAFEVPIAVVVLARLNVVSVEKLKSFRGYFIVVAFVIAAIV TPPDVVSQLALAIPMCLLYELGIWAAQLFIRHTKAPEDPQESAP" gene complement(775371..776510) /locus_tag="Dtpsy_0747" /db_xref="GeneID:7383685" CDS complement(775371..776510) /locus_tag="Dtpsy_0747" /EC_number="1.3.1.74" /note="KEGG: ajs:Ajs_0784 peptidase S1 and S6, chymotrypsin/Hap; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein" /codon_start=1 /inference="protein motif:PRIAM:1.3.1.74" /transl_table=11 /product="2-alkenal reductase" /protein_id="YP_002552226.1" /db_xref="InterPro:IPR001254" /db_xref="InterPro:IPR001478" /db_xref="InterPro:IPR001940" /db_xref="GI:222109962" /db_xref="GeneID:7383685" /translation="MKRLWLLLSQSVTVLLAAYFVVATLQPDWLQRGATRSGAGISLI EAPSSTSAQPAAGSFSGAARRAAPAVVSINTSKAVRHPRSNDPWFQFFFGDQGTQAQT GLGSGVIISPDGYILTNNHVVEGADEIEVTLTDSRRARATVIGTDPETDLAVLKVDLD KLPVIVLGDSDQLAVGDQVLAIGNPFGVGQTVTSGIVSALGRSQLGINTFENFIQTDA AINPGNSGGALVDVNGNLMGINTAIYSRSGGSMGIGFAIPVSTAKLVLDGIVRDGQVT RGWIGVEPNELSPELAQTFGVKATEGVIITGVLQGGPAAVAGVRPGDVILSVEDKATN NVSQLLTAVASLKPGSAASFALQRGDARLEVSVVPGTRPRVQQRR" sig_peptide complement(776439..776510) /locus_tag="Dtpsy_0747" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.905) with cleavage site probability 0.520 at residue 24" gene complement(776646..777989) /locus_tag="Dtpsy_0748" /db_xref="GeneID:7383686" CDS complement(776646..777989) /locus_tag="Dtpsy_0748" /note="PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; FAD-binding 8 domain protein; Ferric reductase domain protein transmembrane component domain; KEGG: ajs:Ajs_0785 ferric reductase domain-containing protein" /codon_start=1 /inference="protein motif:PFAM:PF01794" /transl_table=11 /product="Ferric reductase domain protein transmembrane component" /protein_id="YP_002552227.1" /db_xref="InterPro:IPR000951" /db_xref="InterPro:IPR001433" /db_xref="InterPro:IPR008333" /db_xref="InterPro:IPR013112" /db_xref="InterPro:IPR013130" /db_xref="GI:222109963" /db_xref="GeneID:7383686" /translation="MKRITWAFWAFLLGLTALWLMADTLWPAQPGYFALRTVWVQYSG VLVMGAMSLAMLLAVRPVWLERHLDGLDKMYRLHKWLGIAALAIGTVHWLWAKGTKWA VGWGWLTRPPRGPRPPAENLGLAEATLRDWRGLAEGVGEWAFYAAVLLIVLALVKRFP YRLFAKTHQLLAVAYLALVFHTVVLVQWSYWSQPIGWLLALLVAAGTVSAVLVLTRRV GGRRTVQGRIVSLQPYPALRVLETRIRLDGLWPGHRAGQFAFVTSDPKEGAHPYTIAS AWMPQDPCVTFITKALGDHTSRLPDRLRVGDHVTVEGPYGCFTFDDARPRQIWIGAGI GITPFIARMKQLAHGGSHSTRPIDLFHTTADHDPVALEKLRVDAQAAGVRLHLFVDAQ DGRLDGERLRALVPEWRNASVWFCGPIPFASALRADLAAHGLPTQAFHQELFQMR" sig_peptide complement(777921..777989) /locus_tag="Dtpsy_0748" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.997) with cleavage site probability 0.978 at residue 23" gene 778130..778894 /locus_tag="Dtpsy_0749" /db_xref="GeneID:7383687" CDS 778130..778894 /locus_tag="Dtpsy_0749" /note="PFAM: protein of unknown function DUF34; KEGG: ajs:Ajs_0786 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF01784" /transl_table=11 /product="protein of unknown function DUF34" /protein_id="YP_002552228.1" /db_xref="InterPro:IPR002678" /db_xref="GI:222109964" /db_xref="GeneID:7383687" /translation="MSHPSHTDRDALLAAFDAELQPERFKDYGPNGLQVEGRREIARI VSGVTASRALIDAAIAARADAIFVHHGLFWRGMDGRVTGWMKQRLQRLLAHDINLFAY HLPLDAHAQWGNNAQLGRVLGWQPDQRFGEQDLGFAAPADFADVGALAAHVQAALGRA ATVVAPEQVRPIRRVAWCTGGAQGFFESAIAAGADAFITGEISEQQTHLARETGVAFI AAGHHATERYGAPALAAHVAQRLGLEHRFIDIDNPA" gene 778972..780027 /locus_tag="Dtpsy_0750" /db_xref="GeneID:7383688" CDS 778972..780027 /locus_tag="Dtpsy_0750" /EC_number="1.1.1.262" /note="KEGG: ajs:Ajs_0787 4-hydroxythreonine-4-phosphate dehydrogenase; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA" /codon_start=1 /inference="protein motif:TFAM:TIGR00557" /transl_table=11 /product="4-hydroxythreonine-4-phosphate dehydrogenase" /protein_id="YP_002552229.1" /db_xref="InterPro:IPR005255" /db_xref="GI:222109965" /db_xref="GeneID:7383688" /translation="MNALPALAITQGDPAGIGPEIVAKAFRDAPQVLRGCFVVGDLPT MRRAASCIMRPGQPSLPVARLDAHRAPVDLADIPPRCLPVWQLPELEGVAPAPWGRVS AEAGRAAAACVVWAARAALRGEVAALVTAPLHKEALAAAGVHHPGHTELLQAEAALHA GVSLQQMPVRMMLANDELRTVLVSIHVALRDAITAVTQDSVLQTLRITHAALSRSLGR APRIGVAGLNPHAGEGGLFGREELEIIAPAVTRARSEGIDAHGPFAPDTIFMRARSTP QRAGEFDVVLAMYHDQGLIPVKYLGVDKGVNVTLGLPLVRTSPDHGTAFDIAGQGTAD AESLIEAVRMARQLARP" gene complement(780102..780530) /locus_tag="Dtpsy_0751" /db_xref="GeneID:7383689" CDS complement(780102..780530) /locus_tag="Dtpsy_0751" /note="TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel; KEGG: ajs:Ajs_0788 large conductance mechanosensitive channel protein" /codon_start=1 /inference="protein motif:TFAM:TIGR00220" /transl_table=11 /product="large conductance mechanosensitive channel protein" /protein_id="YP_002552230.1" /db_xref="InterPro:IPR001185" /db_xref="GI:222109966" /db_xref="GeneID:7383689" /translation="MGIAKEFREFAVKGNVIDLAVGVIIGGAFGKIVDSVVSDLIMPV VGLVFGKLDFSNLFIVLGSVPEGTPYTLEAIRKAGVPVLAYGNFITVAVNFVILAFII FVMVKQINRLKRETPVEPPAPPATPEDIQLLREIRDSLKR" gene 780665..781264 /locus_tag="Dtpsy_0752" /db_xref="GeneID:7383690" CDS 780665..781264 /locus_tag="Dtpsy_0752" /EC_number="1.10.2.2" /note="KEGG: ajs:Ajs_0789 ubiquinol-cytochrome c reductase, iron-sulfur subunit; TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein; Ubiquinol-cytochrome c reductase iron-sulfur subunit" /codon_start=1 /inference="protein motif:TFAM:TIGR01416" /transl_table=11 /product="ubiquinol-cytochrome c reductase, iron-sulfur subunit" /protein_id="YP_002552231.1" /db_xref="InterPro:IPR005805" /db_xref="InterPro:IPR005806" /db_xref="InterPro:IPR006317" /db_xref="GI:222109967" /db_xref="GeneID:7383690" /translation="MSETPIDSSKRTWLIASGCAGAVGGVATAVPFVSTFQPSEKAKA AGAAVEVDISGLKPGEKITVEWRGKPVWIVKRTPEQLAELPKLDAQLADPKSARNPAE LTPEYARNEWRSIKPEVLVAVGICSHLGCSPTEKFASGPQPSLPDDWKGGFLCPCHGS TFDMAGRVFKNKPAPDNLEVPPHMYLSETKLLIGEDKKA" sig_peptide 780665..780754 /locus_tag="Dtpsy_0752" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.972) with cleavage site probability 0.949 at residue 30" gene 781280..782701 /locus_tag="Dtpsy_0753" /db_xref="GeneID:7383691" CDS 781280..782701 /locus_tag="Dtpsy_0753" /note="PFAM: Cytochrome b/b6 domain; KEGG: ajs:Ajs_0790 cytochrome b/b6 domain-containing protein" /codon_start=1 /inference="protein motif:PFAM:PF00033" /transl_table=11 /product="Cytochrome b/b6 domain protein" /protein_id="YP_002552232.1" /db_xref="InterPro:IPR005797" /db_xref="InterPro:IPR005798" /db_xref="GI:222109968" /db_xref="GeneID:7383691" /translation="MAAYREFKEVSPNASAGVKVTNWLENRFPTAFDAYKVHMSEYYA PKNFNFWYIFGSLALLVLVIQIVTGIFLVMHYKPDAAKAFESVEYIMRDVPWGWLIRY MHSTGASAFFVVVYLHMFRGLLYGSYRKPRELVWIFGCAIFLALMAEAFMGYLLPWGQ MSYWGAQVIVNLFSAIPFIGPDLALLIRGDYVVGDATLNRFFSFHVIAVPLVLLGLVV AHLLALHDVGSNNPDGIEIKGPGKPVDEHGHPLDGVPFHPYYTVHDILGVCVFLFIFS AVVFFAPELGGYFLEYNNFIPADPLQTPAHIAPVWYFTPFYSMLRAITTEMMYVLIAC VVLGAGFGVFKARLPALIKGGVALAAAVAIALMLAIDAKFWGVVVMGGAVIILFFLPW LDQSPARSIRYRPTWHKYLYAVFVVVFVILAYLGVQPPSPIGERVSQVGTLFYFGFFL LMPWWSRLGTPKPVPDRVTFAAH" gene 782718..783473 /locus_tag="Dtpsy_0754" /db_xref="GeneID:7383692" CDS 782718..783473 /locus_tag="Dtpsy_0754" /note="PFAM: cytochrome c1; KEGG: ajs:Ajs_0791 cytochrome c1" /codon_start=1 /inference="protein motif:PFAM:PF02167" /transl_table=11 /product="cytochrome c1" /protein_id="YP_002552233.1" /db_xref="InterPro:IPR002326" /db_xref="InterPro:IPR009056" /db_xref="GI:222109969" /db_xref="GeneID:7383692" /translation="MKKLILTLVAALGLVAGAHAAGGGMAWDKAPVNTSDTASLQNGA KLFVNYCLNCHSAAFMRFNRLKDIGLTDQQIKDNLLFTTDKVGETMKSAIDPKQAKVW FGANPPDLTVIARSRAGAGGTGADYLYTFLRTFYRDDTKATGWNNLAFPNVGMPHALW QLQGERRPIFEERESHGKTEHVLKGWEQVTAGSMTPLQYDQALGDLVNYLQWMGEPAQ NTRVRIGVWVLIFLGVFTLIAWRLNAAFWKDVK" sig_peptide 782718..782780 /locus_tag="Dtpsy_0754" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.974 at residue 21" gene 783569..784180 /locus_tag="Dtpsy_0755" /db_xref="GeneID:7383693" CDS 783569..784180 /locus_tag="Dtpsy_0755" /note="PFAM: Glutathione S-transferase domain; KEGG: ajs:Ajs_0792 glutathione S-transferase domain-containing protein" /codon_start=1 /inference="protein motif:PFAM:PF02798" /transl_table=11 /product="Glutathione S-transferase domain protein" /protein_id="YP_002552234.1" /db_xref="InterPro:IPR004045" /db_xref="InterPro:IPR004046" /db_xref="GI:222109970" /db_xref="GeneID:7383693" /translation="MMVLYSGTTCPFSHRCRFVLFEKGMDFEIRDVDLYNKPEDISVM NPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPGDPVDRARVRLFLLNFEKELF VHVNALESRATKGNEKALEKARTHIRDRLTQLAPVFLKNKYMLGEGFSMLDVAIAPLL WRLDYYGIELSKNAAPLLKYAERIFSRPAYIEALTPSEKVMRK" gene 784213..784740 /locus_tag="Dtpsy_0756" /db_xref="GeneID:7383694" CDS 784213..784740 /locus_tag="Dtpsy_0756" /note="PFAM: Stringent starvation protein B; KEGG: ajs:Ajs_0793 stringent starvation protein B" /codon_start=1 /inference="protein motif:PFAM:PF04386" /transl_table=11 /product="Stringent starvation protein B" /protein_id="YP_002552235.1" /db_xref="InterPro:IPR007481" /db_xref="GI:222109971" /db_xref="GeneID:7383694" /translation="MKPQEFPSTRPYLIRALYEWCTDNGFTPYLVVRVNESVQVPREY VNNGEIVLNASYDATSGLQLGNDFIEFKARFGGRPHDIMVPVRRVVAIYARENGQGMA FPLEEEVSVPPAAAVVSSADSGAGPGVPGSTVSERGPVQLQSVDGSVSDAHEEAPRPP PPTGGAGRPSLKRIK" gene 784801..784876 /locus_tag="Dtpsy_R0003" /note="tRNA-Thr1" /db_xref="GeneID:7383695" tRNA 784801..784876 /locus_tag="Dtpsy_R0003" /product="tRNA-Thr" /db_xref="GeneID:7383695" gene complement(784984..785283) /locus_tag="Dtpsy_0757" /db_xref="GeneID:7383696" CDS complement(784984..785283) /locus_tag="Dtpsy_0757" /note="KEGG: ajs:Ajs_0794 hypothetical protein" /codon_start=1 /inference="similar to AA sequence:KEGG:Ajs_0794" /transl_table=11 /product="hypothetical protein" /protein_id="YP_002552236.1" /db_xref="GI:222109972" /db_xref="GeneID:7383696" /translation="MNRRHHAISLQQATQESPTLAKLTALTQESSARLKAIEGLIPPL LRPAIQAGPIEGACWCLLVRSNAAAAKVRQLLPAFEAHLRSRGWEVNSIRLKVQT" gene 785412..786284 /locus_tag="Dtpsy_0758" /db_xref="GeneID:7383697" CDS 785412..786284 /locus_tag="Dtpsy_0758" /note="PFAM: Peptidase M23; KEGG: ajs:Ajs_0795 peptidase M23B" /codon_start=1 /inference="protein motif:PFAM:PF01551" /transl_table=11 /product="Peptidase M23" /protein_id="YP_002552237.1" /db_xref="InterPro:IPR016047" /db_xref="GI:222109973" /db_xref="GeneID:7383697" /translation="MALLFMTVMAYHWVLMHGAREGWPVVGSMARLAVQDEQAQRERF MRANIDAMARKLGDMQARVLQLESLGERVRGLAGLPASEVQSLPGRGGMLVAGRPLGL DELNAALDDLVAITGRRTDLMTVAESRLFDQHIRKHLIPTQVPVRDTAVGSPFGWRID PFTGQSALHTGLDFSAGTGTPIVAAAGGVVIAQEYHPAYGNMVEIDHGSQLVTRYAHA SKTLVKAGDIVRRGQKIAEVGSTGRSTGPHLHFEVWVQGVPQDPQKFLFAGEPAPMPH ALTGRAAIGHLAHR" gene 786420..789173 /locus_tag="Dtpsy_0759" /db_xref="GeneID:7383698" CDS 786420..789173 /locus_tag="Dtpsy_0759" /note="TIGRFAM: preprotein translocase, SecA subunit; PFAM: SEC-C motif domain protein; SecA DEAD domain protein; SecA Wing and Scaffold; SecA preprotein cross-linking region; KEGG: ajs:Ajs_0796 preprotein translocase subunit SecA" /codon_start=1 /inference="protein motif:TFAM:TIGR00963" /transl_table=11 /product="preprotein translocase, SecA subunit" /protein_id="YP_002552238.1" /db_xref="InterPro:IPR000185" /db_xref="InterPro:IPR001650" /db_xref="InterPro:IPR004027" /db_xref="InterPro:IPR011115" /db_xref="InterPro:IPR011116" /db_xref="InterPro:IPR011130" /db_xref="InterPro:IPR014018" /db_xref="InterPro:IPR014021" /db_xref="GI:222109974" /db_xref="GeneID:7383698" /translation="MATNFLTKIFGSRNDRLLKQYRKTVARINAMEPDYEKLSDEALR GKTQEFKDRIAQGESLDALLPEAFAVVREGSKRIMKMRHFDVQLVGGMALHYGKIAEM RTGEGKTLTATLPVYLNALSGQGVHVVTVNDYLAGRDAQWMGRLYNFLGLTVGINLPQ MPREEKQAAYQADITYGTNNEYGFDYLRDNMVYDARERVQRGLNYAIVDEVDSILIDE ARTPLIISGQAEDHTALYVAMNKVVPLLVRQEGEADPRTGEGVTKPGDFTLDEKTHQV FLTEQGHENAERILASQGLIPEGASLYDPANITLVHHLYAALRANHLYHRDQHYVVQN GEIVIVDEFTGRLMAGRRWSEGLHQAVEAKEGVNIQAENQTLASITFQNYFRLYNKLS GMTGTADTEAYEFQEIYGLETVVIPPNRPSKRDDQLDRVYKTTREKYEAAIADIRECH ERGQPVLVGTTSIENSEIIDELLNKAGLPHQVLNAKQHAREADIVAQAGRPGMITIAT NMAGRGTDIVLGGNVEKAIAALEADESLSEAERAARVQELRAQWKLDHEKVTALGGLR IIATERHESRRIDNQLRGRSGRQGDPGSSRFYLSLDDQLMRIFAGDRVKAIMDRLKMP DGEAIEAGIVTRSIESAQRKVEARNFDIRKQLLEYDDVANDQRKVIYQQRNEILDAPD LGVLIDAMRDDCLADVVRQYVPAESVEEQWDLAGLEKALANDWQVSLALQKEVEGSDA ITDEEILEKVQQAAREAFLAKVGQVGAENFTQFERMVLLQSFDTNWRDHLSALDYLRQ GIHLRGYAQKQPKQEYKREAFELFRQLIDQVKNEVTRLMMTVQVQSSAQLDEATQAME DRGEGISNVTYSSPTETGEVETVADAATAAQPAAAGVRVGRNDPCPCGSGKKYKQCHG KLA" gene 789274..790503 /locus_tag="Dtpsy_0760" /db_xref="GeneID:7383699" CDS 789274..790503 /locus_tag="Dtpsy_0760" /EC_number="2.3.1.1" /note="KEGG: ajs:Ajs_0797 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein; TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; PFAM: arginine biosynthesis protein ArgJ" /codon_start=1 /inference="protein motif:TFAM:TIGR00120" /transl_table=11 /product="arginine biosynthesis bifunctional protein ArgJ" /protein_id="YP_002552239.1" /db_xref="InterPro:IPR002813" /db_xref="GI:222109975" /db_xref="GeneID:7383699" /translation="MPVNLSAPLASDLHPVAGVRIGVTEAGVRKAQRKDLTVFLLDEG TTVAGVFTQNRFCAAPVQVCREHLDGGQAIRAMVVNTGNANAGTGADGLARARATCEA LAGHLGLAASQVLPFSTGVIMEPLPHERIAAALPAALADAQPGHWARAAEGIMTTDTL PKAFSTQVQLGGATVTITGISKGAGMIRPNMATMLGFLATDACIAPELLRPLVRELAD QSFNRVTIDGDTSTNDSFVLMATHKARHAPITSLDSAEGRVLKAALLEVAQKLAQAIV RDGEGATKFITVRVEGGQTGEECRQVAYAIAHSPLVKTAFFASDPNLGRILAAVGYAG IADLDQTKIDLFLDDVHVAVQGGRNPAYREEDGQRVMKQSEITVRVVLGRGTAVDTVW TCDLSHDYVTINADYRS" gene 790558..791436 /locus_tag="Dtpsy_0761" /db_xref="GeneID:7383700" CDS 790558..791436 /locus_tag="Dtpsy_0761" /note="PFAM: protein of unknown function DUF815; KEGG: ajs:Ajs_0798 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF05673" /transl_table=11 /product="protein of unknown function DUF815" /protein_id="YP_002552240.1" /db_xref="InterPro:IPR008533" /db_xref="GI:222109976" /db_xref="GeneID:7383700" /translation="MTDKFDQLIARAEQLISRIEAVLPQPLSAPDWAASIAWRYRKRS GGHGVLEPVRHVAAMQLSDLKEIDAQKEKIQRNTQQFVEGKPANNVLLTGARGTGKSS LIKACLNSYAPQGLRLIEVDKADLTDLPDIVDVVSGRPEKFIVYCDDLSFEDGEAGYK ALKSILDGSVAAATPNVLVYATSNRRHLLPEYMKENLGYTHTDDGEVHPGEAVEEKIS LSERFGLWVSFYPFSQDEYLAIVAQWLAALGVPAQAIEAARPQALVWALERGSRSGRV AYQFARDFAGRQGEGA" gene 791433..791879 /locus_tag="Dtpsy_0762" /db_xref="GeneID:7383701" CDS 791433..791879 /locus_tag="Dtpsy_0762" /note="PFAM: NUDIX hydrolase; KEGG: ajs:Ajs_0799 NUDIX hydrolase" /codon_start=1 /inference="protein motif:PFAM:PF00293" /transl_table=11 /product="NUDIX hydrolase" /protein_id="YP_002552241.1" /db_xref="InterPro:IPR000086" /db_xref="GI:222109977" /db_xref="GeneID:7383701" /translation="MSESTSTPQRKHTEVAVGILLREDGAMLLSTRPTGKPYAGYWEF PGGKIEAGETVEQALRRELIEELGVTIGPVEAWKVTEHDYPHALVRLHWCKVREWSGA FEMREGQTMAWQHWPLQVKPVLPGAYPVLQWLAEERGEVFDASLLA" gene complement(791949..792179) /locus_tag="Dtpsy_0763" /db_xref="GeneID:7383702" CDS complement(791949..792179) /locus_tag="Dtpsy_0763" /note="PFAM: protein of unknown function DUF329; KEGG: ajs:Ajs_0800 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF03884" /transl_table=11 /product="protein of unknown function DUF329" /protein_id="YP_002552242.1" /db_xref="InterPro:IPR005584" /db_xref="GI:222109978" /db_xref="GeneID:7383702" /translation="MTGTPSRSDTPAPQGKRVPCPTCGGPSLYSPANRFRPFCSERCK QIDLGAWAAEDFRMPAEAPPEDAEFGDPKRQP" gene complement(792186..792941) /locus_tag="Dtpsy_0764" /db_xref="GeneID:7383703" CDS complement(792186..792941) /locus_tag="Dtpsy_0764" /note="PFAM: protein of unknown function DUF1342; KEGG: ajs:Ajs_0801 hypothetical protein" /codon_start=1 /inference="protein motif:PFAM:PF07072" /transl_table=11 /product="protein of unknown function DUF1342" /protein_id="YP_002552243.1" /db_xref="InterPro:IPR009777" /db_xref="GI:222109979" /db_xref="GeneID:7383703" /translation="MILYEYPFNERLRTYLRLEQLFRRLGELIARPHPLDHHYALVTM FEVMDVAARADLKADVLKDLEKHKHQLDAYRGNPSISEEALDGVIAQLDQCFAALNAQ TGKAGQALTENDWLMSIRSRVGIPGGTCGFDLPAYYAWQHRPPQDRQHDLHHWAATLG PLAESVYVLLRLLRDSGLPQKVAAERGQFQQNLPQGRTFQLLRLAIDPALQLIPEISG NRLIVSVRLMRQEEGGRLVPSTEDAAFELTLCA" gene complement(793032..793625) /locus_tag="Dtpsy_0765" /db_xref="GeneID:7383704" CDS complement(793032..793625) /locus_tag="Dtpsy_0765" /EC_number="2.7.1.24" /note="KEGG: ajs:Ajs_0802 dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase" /codon_start=1 /inference="protein motif:TFAM:TIGR00152" /transl_table=11 /product="dephospho-CoA kinase" /protein_id="YP_002552244.1" /db_xref="InterPro:IPR001977" /db_xref="GI:222109980" /db_xref="GeneID:7383704" /translation="MKLGVTGGIGSGKSTVAGMLRQNGAALIDADAIARSVTEAEGAA IAALRDEFGPDYITDGALDRARMRTLVFSDPTAKQRLEAIVHPFVGREIAHAAAQAHR AGHALIVFDIPLLTESPRWARQLDTVLVVDCREETQIQRVQMRSGLTADAVRAIMATQ SPRATRRAAADLVVYNDGLALSDLQTKAREIAVFFGL" gene complement(793657..794538) /locus_tag="Dtpsy_0766" /db_xref="GeneID:7383705" CDS complement(793657..794538) /locus_tag="Dtpsy_0766" /EC_number="3.4.23.43" /note="PFAM: peptidase A24A prepilin type IV; peptidase A24A domain protein; KEGG: ajs:Ajs_0803 Type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A" /codon_start=1 /inference="protein motif:PRIAM:3.4.23.43" /transl_table=11 /product="Prepilin peptidase" /protein_id="YP_002552245.1" /db_xref="InterPro:IPR000045" /db_xref="InterPro:IPR010627" /db_xref="InterPro:IPR014032" /db_xref="GI:222109981" /db_xref="GeneID:7383705" /translation="MTGSLAVDAVLVGVLGMLIGSFLNVVIHRLPRMMERQWAEECRQ YGQDVGLLSSAALPEADNEPLSLSKPRSRCPSCGHAIRWYENIPVLSYLALRGRCAGC GTRISPRYPLVELATGALFYACALRWGWSLTTAAWCGFSAALVTLACIDWDTTLLPDD ITLPLLWAGLLAAVLRWIEVQPVDAVIGAAAGYLSLWSVYWGFKLATGKEGMGYGDFK LFAALGAWFGWQALVPIILLASVIGAIVGIAMKLASTLREGKYVPFGPFLVGGGMAAM LWGPGRIMQAVFSVLGL" gene complement(794538..795755) /locus_tag="Dtpsy_0767" /db_xref="GeneID:7383706" CDS complement(794538..795755) /locus_tag="Dtpsy_0767" /note="PFAM: type II secretion system protein; KEGG: ajs:Ajs_0804 type II secretion system protein" /codon_start=1 /inference="protein motif:PFAM:PF00482" /transl_table=11 /product="type II secretion system protein" /protein_id="YP_002552246.1" /db_xref="InterPro:IPR001992" /db_xref="InterPro:IPR003004" /db_xref="GI:222109982" /db_xref="GeneID:7383706" /translation="MATVASRGIKDFVFEWEGKDRSGKIVRGEVRAAGENQVKATLRR QGVLPTKIKKRRMSAGKKIKPKDIALFTRQMATMMKAGVPLLQAFDIVGRGNTNPSVT KLLNDIRGDVETGTSLNAAFRKYPMYFDSLYCNLVEAGEAAGILEALLDRLALYMEKT EAIKSKIRSALMYPISVIIVAFVVVTIIMIFVIPAFKEVFTSFGADLPAPTLFVMAIS EFFVAYWWLIFGVIGGGFYFFMQAWKRSEKMQRFMDRFLLKMPIFGALIDKSCVARWT RTLSTMFAAGVPLVEALDSVAGASGNSVYAIATEKIQQEVSTGTSLTAAMGNANVFPS MVLQMCAIGEESGSIDHMLGKAADFYEAEVDEMVAGLSSLMEPIIIVFLGTLIGGIVV SMYLPIFKLGQVV" gene complement(795776..797509) /locus_tag="Dtpsy_0768" /db_xref="GeneID:7383707" CDS complement(795776..797509) /locus_tag="Dtpsy_0768" /note="KEGG: ajs:Ajs_0805 type IV-A pilus assembly ATPase PilB; TIGRFAM: type IV-A pilus assembly ATPase PilB; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase" /codon_start=1 /inference="protein motif:TFAM:TIGR02538" /transl_table=11 /product="type IV-A pilus assembly ATPase PilB" /protein_id="YP_002552247.1" /db_xref="InterPro:IPR001482" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR007831" /db_xref="InterPro:IPR013374" /db_xref="GI:222109983" /db_xref="GeneID:7383707" /translation="MAAIDTQKEAQPIALPGLARALMSVGKLDQKAAEEIYKKSQNSR SSFIAELTESKIITPSDLAHTVSTVFGAPLLDVDAIDRQRIPKDLLDVKLCQSYKVIA LSKRNNRLIVATADPTFQEAAEKIKFTTQMGVDWIIAEYDKLLRLIEASTKSGTETLD GINSSNDFEFGDIPVDEAPDEDADNPAEVEDAPVVKFLHKMLLDAFNMRASDLHFEPY EHHYRVRFRIDGELREIASPPIAIKEKLASRIKVISRLDISEKRVPQDGRMKLK