LOCUS NC_012857 1323321 bp DNA circular BCT 18-MAR-2010 DEFINITION Ralstonia pickettii 12D chromosome 2, complete genome. ACCESSION NC_012857 VERSION NC_012857.1 GI:241665037 DBLINK Project:18937 KEYWORDS . SOURCE Ralstonia pickettii 12D ORGANISM Ralstonia pickettii 12D Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia. REFERENCE 1 (bases 1 to 1323321) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Sims,D., Meincke,L., Brettin,T., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Ovchinnikova,G., Marsh,T. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Complete sequence chromosome 2 of Ralstonia pickettii 12D JOURNAL Unpublished REFERENCE 2 (bases 1 to 1323321) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (22-JUN-2009) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 1323321) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Sims,D., Meinche,L., Brettin,T., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Ovchinnikova,G., Marsh,T. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (17-JUN-2009) US DOE Joint Genome Institute, 2800 Mitchell Drive B310, Walnut Creek, CA 94598-1698, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP001645. URL -- http://www.jgi.doe.gov JGI Project ID: 4003027 Source DNA and organism available from Terry Marsh (marsht@msu.edu) Contacts: Terry Marsh (marsht@msu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..1323321 /organism="Ralstonia pickettii 12D" /mol_type="genomic DNA" /strain="12D" /db_xref="taxon:428406" /chromosome="2" gene 67..1413 /locus_tag="Rpic12D_3462" /db_xref="GeneID:8022360" CDS 67..1413 /locus_tag="Rpic12D_3462" /EC_number="1.13.11.5" /inference="protein motif:TFAM:TIGR01015" /note="KEGG: rso:RSp0691 homogentisate 1,2-dioxygenase; TIGRFAM: homogentisate 1,2-dioxygenase; PFAM: homogentisate 12-dioxygenase" /codon_start=1 /transl_table=11 /product="homogentisate 1,2-dioxygenase" /protein_id="YP_002983397.1" /db_xref="GI:241665038" /db_xref="InterPro:IPR005708" /db_xref="GeneID:8022360" /translation="MNMLAPTAKNAFTPASLDRPAYQSGFGNEFSTEALPGALPHGQN SPQKAPYGLYAEQISGTAFTAPRAHNRRSWLYRIRPGAVHLPFEAMAQGRFHSHFNEV PPSPNQLRWDPLPAPAAGTDFIDGIVTFAGNGGPDAQTGCGIHLYAANADMTDRFFYN ADGELLIVPQQGRLRLLTEMGVVDVEPLEIAVIPRGVRFRVELPDGDARGYICENFGA LFRLPDLGVIGSNGLANPRDFLTPHAWYEDREGAFELVAKFQGSLWTAKIGHSPLDVV AWHGNLAPYKYDLRLFNTIGSISYDHPDPSIFLVLQSPSATPGVDTIDFVIFPPRWLA AENTFRPPWFHRNVASEFMGLIQGVYDAKAEGFVPGGASLHNCMSGHGPDADTFEKAS NSDTTKPHKVDATMAFMFETPAVIRPTRFAAESAQLQAKYFECWQGLKKHFDPSKR" gene 1720..2991 /locus_tag="Rpic12D_3463" /db_xref="GeneID:8021149" CDS 1720..2991 /locus_tag="Rpic12D_3463" /EC_number="3.7.1.2" /inference="protein motif:TFAM:TIGR01266" /note="KEGG: rso:RS01759 fumarylacetoacetase; TIGRFAM: fumarylacetoacetase; PFAM: Domain of unknown function DUF1969; fumarylacetoacetate (FAA) hydrolase" /codon_start=1 /transl_table=11 /product="fumarylacetoacetase" /protein_id="YP_002983398.1" /db_xref="GI:241665039" /db_xref="InterPro:IPR002529" /db_xref="InterPro:IPR005959" /db_xref="InterPro:IPR015377" /db_xref="GeneID:8021149" /translation="MTTRQLSWLESANTPDTHFPLENLPFGIFSTKENPSPRAGVALG DQVIDLGVLDDAGLLPASTRGTFRTGKLNSFIALGKPVWAETRKKLQALFSVADTHVR DNATLHARALVPQAHAVMHLPIDIPGYTDFYSSKEHATNVGRMFRDPENALLPNWLEI PIGYNGRASSVVVSGTPLHRPMGQIKLPDQPRPIFTACRKLDYELEMAFVVGKPSALG EPVSVDAAPDHMFGVVLLNDWSARDIQQWEYVPLGPFNSKGFGTSISPWIVTMDALEP FRVANPVQSPEPLEYLRQSHPNAYDIALETALRPHGGERTTIARTNFRAMYWTMAQQL AHHTVSGCNVRVGDLMGSGTISGTTPDSYGSLLELTLNGKQPLDLGNGTTRAFLEDGD EVIMTGWCQGDGYRVGFGEVRGEILPTRGVN" gene complement(3031..3669) /locus_tag="Rpic12D_3464" /db_xref="GeneID:8021150" CDS complement(3031..3669) /locus_tag="Rpic12D_3464" /inference="protein motif:PFAM:PF04299" /note="PFAM: Negative transcriptional regulator; KEGG: rso:RS01760 hypothetical protein" /codon_start=1 /transl_table=11 /product="FMN-binding negative transcriptional regulator" /protein_id="YP_002983399.1" /db_xref="GI:241665040" /db_xref="InterPro:IPR007396" /db_xref="GeneID:8021150" /translation="MYVPTHFEASRTDALLLLIAQNPFGSLVTHGKNGLDANHIPFLL LPEEGPRGMLHAHVARANPVWQDVADGDEVLVIFRAGDAYISPTWYPSKQAHHKHVPT WNYRVVHAHGRITIRDDERFVRGVVARLTRTHEASQPVPWKMSDAPADYVDDLLKMIV GIEIEITRLEGKLKLGQNREARDVRGAGEALKAAGENVIGDAMLDVAQDKAE" gene complement(3793..5103) /locus_tag="Rpic12D_3465" /db_xref="GeneID:8021151" CDS complement(3793..5103) /locus_tag="Rpic12D_3465" /inference="protein motif:PFAM:PF00005" /note="PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bac:BamMC406_6182 ABC transporter related" /codon_start=1 /transl_table=11 /product="ABC transporter related" /protein_id="YP_002983400.1" /db_xref="GI:241665041" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR017871" /db_xref="GeneID:8021151" /translation="MSKPQSSAPVIELCEVCKSFAKPSGEPLTVLGKIDLAVHDGEIL GLLGRSGSGKSTLLRIAAGLVKPTSGCVRYRGQPLDGPAEGIAVVFQTFALYPWLTVL DNVELGLDALSLPLDEARRRAMAAIELTGLDGFESAFPRELSGGMRQRVGFARALVSE PTLLLMDEPFSALDVLTAETLRTDFLDLWAQRQLSTRAVLMVTHNIEEAVLMCDRILV LGANPGHIVAEICVPLPQPRNRLDAAFQSIVNDIYSILTARLTEVPDTRAHSGLAMRL PGVSGHQIDELIEALAAPSNAGHVTLPKIAGALTLRLHDLFPIATALHILEFAELHGG TLKLTTAGRVFAQSGDDERKRLFREHLQRFVPLAMRIREVLDEREGHRAPRARFALEL QDHLNQADAEVTLRTAIDWGRYTGLFNYDDRTRMFSGPAEPAPQ" gene complement(5109..6842) /locus_tag="Rpic12D_3466" /db_xref="GeneID:8021152" CDS complement(5109..6842) /locus_tag="Rpic12D_3466" /inference="protein motif:PFAM:PF00528" /note="PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmj:BMULJ_05602 sulfonate/nitrate/taurine transport system permease protein" /codon_start=1 /transl_table=11 /product="binding-protein-dependent transport systems inner membrane component" /protein_id="YP_002983401.1" /db_xref="GI:241665042" /db_xref="InterPro:IPR000515" /db_xref="GeneID:8021152" /translation="MEHHAEVPGGGQRLPHVPRWRDLLAMLLVLGMVLLLGSGARQMV GPLVAASQPEISLSPLALPAYVLRTVTRMFAALALSLLFTFTYATLAAKSRRAEMVLI PLLDVLQSVPILGYLSFTVVFFMALFPGNVLGAELAAVFAIFTSQAWNMAFSFYQALR TIPADLDEASRGFRASSWQRFWRLEVPFAMPGLVWNMMMSMSGGWFFVVASEAISVGD VRVALPGVGAYVARAIAQRDLGAVGWAILAMAVAIVLYDQLLFRPMVAWADKFRFEQT ASQMPPRSWLLDLFHRSAWVQRMMAPVGIALHQAARAQLRWPLPAMRWKGAMPRRLGD ALWLGLCAAGAAYAMLALYRLAGRTLAWTDVATVARSGAFTLLRVMVLIALASIVWVP VGVAVGLSPRWTARVQPLAQFLAAFPANLLFPVVVFLIVRFHGSVDVWLSLLMILGTQ WYILFNVIAGAAAFPSDLRETATSFRIRAPNWWRKVMLPGILPYYVTGVITASGGAWN ASIVAEAVSWGAVHLQAQGLGAYVAQQTAAGDYPRIALGIAAMSLMVIATNRLLWRPL YAYAERRMRLD" gene complement(6980..8137) /locus_tag="Rpic12D_3467" /db_xref="GeneID:8021153" CDS complement(6980..8137) /locus_tag="Rpic12D_3467" /inference="protein motif:PFAM:PF00441" /note="PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rso:RS01762 putative acyl-CoA dehydrogenase oxidoreductase protein" /codon_start=1 /transl_table=11 /product="acyl-CoA dehydrogenase domain protein" /protein_id="YP_002983402.1" /db_xref="GI:241665043" /db_xref="InterPro:IPR006089" /db_xref="InterPro:IPR006090" /db_xref="InterPro:IPR006091" /db_xref="InterPro:IPR006092" /db_xref="InterPro:IPR013107" /db_xref="GeneID:8021153" /translation="MALDDESFGLLQQSVQRFIQDRLMPAENILEDEDDVPADIVADM KDMGLFGLSIPEEHGGIGLSMAQECEVVYDLGHTAFAFRSVFGTNVGIGSQGILMDGT DAQKADYLPRIASGELIISFALTEPNAGSDAASLQTRATLDGDHYVINGTKRYITNAP RAGAFTLMARTGGEGASGISAFIVPADTPGITLGKPDKKMGQRGTKTCDVMLDNVRVP AANIIGGVAGQGFKTAMKVLDRGRLHISALACGMAHRLITDAVAYAKERKQFGQPIAD FQLIQAMLADSQAELYAGMSMVRDCARRYDAKPVGKQDHEVSMLASCTKMFCTEMVGR VADRAVQIHGGAGYIAEYKAERFYRDVRLLRLYEGTTQIQQLIIAKNLLRD" gene 8250..9170 /locus_tag="Rpic12D_3468" /db_xref="GeneID:8021154" CDS 8250..9170 /locus_tag="Rpic12D_3468" /inference="protein motif:PFAM:PF03466" /note="PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cti:RALTA_B0091 putative transcriptional regulator, LysR family" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LysR family" /protein_id="YP_002983403.1" /db_xref="GI:241665044" /db_xref="InterPro:IPR000847" /db_xref="InterPro:IPR005119" /db_xref="GeneID:8021154" /translation="MDLNALKLFVEIVDAGNLSAAARRLQTTRSNVSHRLKAFERALG VQLLRRTTRRVEPTEVGAGIYEHGRSILREMAAADALVSSLGKSLQGSVRLSVPTGLG HLLVSPLLVAFKRAYPDIRLDVRFDNRVSDLIGEDVDVALRIVSNPPESLVATLLDEV DWVLCAAPDYLAARGVPSSVEALRDHTIVSAPAVGQPLRLAAQLGDERTAVTLDPGVS SDNYLFLQAAVRAGNGLGILPYYAAADDLREGYIKRVLPAYRFSVFGSRLYMLAMPSR YRTLATRHLLDFLKAGLQGKLPRLPQKASA" gene complement(9171..10088) /locus_tag="Rpic12D_3469" /db_xref="GeneID:8021155" CDS complement(9171..10088) /locus_tag="Rpic12D_3469" /inference="protein motif:PFAM:PF03466" /note="PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rso:RSp0677 putative transcriptional activator MetR transcription regulator protein" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LysR family" /protein_id="YP_002983404.1" /db_xref="GI:241665045" /db_xref="InterPro:IPR000847" /db_xref="InterPro:IPR005119" /db_xref="GeneID:8021155" /translation="MLEVRHLRTLIALADGGSVSRAAERLHLTQSALSHQLRALESHY GLAVVRRKGQTVELSEAGERLLELAQKVVADIQAAERDLERIKGRAAGTLRIALECHT CFDWLMPVMDAFRQRWPEVEMDLVSGFHADPLALLKDGRADVVIGSDAKMRRGVVFAP LFRFEILAVLPVDHPLRSRKWLEAKDFTDQTLITYPVPEERIDLIRQVLTPAGIVFNR RTAELTIAVLQLVASRRGLAALPSWGIKNYVDYEYVVAKRVGKEGLWSDLYAAMTRDY AQAPFAQDFIETAKSICFAQLQGLMPLEG" gene 10209..12539 /locus_tag="Rpic12D_3470" /db_xref="GeneID:8021156" CDS 10209..12539 /locus_tag="Rpic12D_3470" /inference="protein motif:TFAM:TIGR01371" /note="TIGRFAM: 5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase; PFAM: Methionine synthase vitamin-B12 independent; Cobalamin-independent synthase MetE domain protein; KEGG: rso:RSp0676 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase" /codon_start=1 /transl_table=11 /product="5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase" /protein_id="YP_002983405.1" /db_xref="GI:241665046" /db_xref="InterPro:IPR002629" /db_xref="InterPro:IPR006276" /db_xref="InterPro:IPR013215" /db_xref="GeneID:8021156" /translation="MTTIHTLGYPRIGAQRELKFALESFWKGASSEDDLRATGSALRA RHWAAQRDAGLDFVTVGDFAWYDQVQQTAALLGAVPTRYGFDPAQLTLAQSFVLARGN ADHAAMEMTKWFDTNYHYLVPELTPDLLDRQWGPGTEWLFDEVREAQALGHRVKVVLL GPITFLHLAKARHGLADKLALLPQVLQAYTAVLQRLAALKVEWVQIDEPALVLDLPQA WVDAFGPAHQALAAAKGPKRLLATYFEAASHHAALIQSLPVDGVHLDLVRAPDQVAAF APWSADKVLSVGVVDGRNIWRTDLTRVLAHLTPLAQALGDRLWIAPSCSLLHVPVDLS AETKLDDELKGWLAFARQKLDELAVIKRALVEGPAAVQGELDDNRIAIASRTQSRRVH NAGVKKRVAAIRAADAVRAAPYPARADAQQARLNLPLLPTTTIGSFPQTPEIRRARAQ HKRGDLPALDYLQRMRTEIADVVRRQEALGLDMLVHGEAERNDMVEYFGELLWGYAFT ANGWVQSYGSRCVKPPVIYGDVYRPEAMTVEWSKYAQSLTSKPMKGMLTGPVTMLQWS FVRDDQPREQTALQIALALRDEVCDLEAAGIAAIQIDEPAFREGLPLRASDVPTYLEW AARAFRVSASGVRNDTQIHTHMCYSEFNDILPAIASMDADVITIETSRSNMELLDAFA EFAYPNEIGPGVYDIHSPRVPRVDEMESLLDKAAQVVPVQRLWVNPDCGLKTRGWPEV EAALQGIVEATHRLRAKHANAKRAGSKAAHVEGEMA" gene complement(12656..15757) /locus_tag="Rpic12D_3471" /db_xref="GeneID:8021157" CDS complement(12656..15757) /locus_tag="Rpic12D_3471" /inference="protein motif:PFAM:PF00873" /note="PFAM: acriflavin resistance protein; KEGG: rso:RS01779 transporter lipoprotein transmembrane" /codon_start=1 /transl_table=11 /product="acriflavin resistance protein" /protein_id="YP_002983406.1" /db_xref="GI:241665047" /db_xref="InterPro:IPR001036" /db_xref="GeneID:8021157" /translation="MNFSAWAIRKPIPPILLFILMTVAGLVSFKMLSIQNFPDIDFPA VSITASLPGATPTQMETEVTRKIEDSVASIGAIKHITSTVNDGSSTTMVEFELEKDVQ EAVNDVRDAVSRIRAQLPSDVQEPVISRVTFAGMPVLTYAVDAPDMDAEDLSWFVDNT ISKRLLSVHGVAKVTRQGGVDREVRVQLDPVRLQALNVTAADISAQVRGVQQEAPGGR GNIGGQEQAVRTLGTVKSARELAQMDIPLSDGRRIRLSDVADVRDTAAEPRQMALLDG KPVVSFQVFRSRGASEISVAKGVREALARLRTERPNVHVTEVYNMVKPVSDAYAASMH ALYEGAILAVLVVWLFLRDWRATFVSAVALPLSIIPTFAAMNMLGFTLNGITLLALTL VVGILVDDAIVEVENIVRHLRNGKPPYEAALEAAQEIGLAVVATSLTLVAVFLPTAFM GGISGKFFKQFGWTASLAVLASLLVARLLTPMMAAYLLKPQDEPNRDGWIMVRYLRAA RWCLIHPWKTSAMAAVFFAVSVAIIGLIPATFLPPEDWAQLQMTVESPPGSTIAQTRD NVERVRKIVMQHKDVRRVYAAIGSGVMAGVPGSSGGEVRTGTLTISLTDRHERRIRQQ EVQRQLREMLEGVPGVRISFGAVGSGEQLQVVLAGDDPATLQQASRDVMRDLRTVPGL GAITSSASLLRPEIVIRPDFARAAQQGVTAAAIGQAVRVATAGDYDVNLPKLNLPERQ VYIRVELDPKARHQIDTIRQLRVPGRNGAVPLENIADITLGSGPAQIDRYDRSRNVTI SVGLEGRALGDTNMAVEALPAIKNLPPGVRRIASGDVEGMQELFSSFFLAMLAGVLCV YAVLVLLFHDFTQPVTILAALPLSVGGAFGLLALFGFSLSLPALIGLLMLMGIVTKNS ILLVEYAIVARRDLGMSRTEAIIDACHKRARPIVMTTVAMTAGMVPMALGLEGDAGFR APMAVAVIGGLLTSTLLSLLVVPVVFEKVDDLKEWTLRKVRGARRHEVKVQPEAEQGA GQA" gene complement(15754..16893) /locus_tag="Rpic12D_3472" /db_xref="GeneID:8021158" CDS complement(15754..16893) /locus_tag="Rpic12D_3472" /inference="protein motif:TFAM:TIGR01730" /note="TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rso:RS01779 transporter lipoprotein transmembrane" /codon_start=1 /transl_table=11 /product="efflux transporter, RND family, MFP subunit" /protein_id="YP_002983407.1" /db_xref="GI:241665048" /db_xref="InterPro:IPR003997" /db_xref="InterPro:IPR006143" /db_xref="GeneID:8021158" /translation="MTGQRIWKATLAVVLAGMLGACGKAAPDGKKDPHAAKPALAVNV VHLAQRVWPRIATASGAVQPWQEASVGAEVNGLKLAEVLVNVGDVVKHGQLLARMSDD TVRADVAAQRASLAEAEASAAQAAGEARRAHELDKSGAISQQDLIQYDTQAKTAAAKL AAARAQFDSQELRLRYTRVVAPDDGVISARSATVGAVVASGTELFKLIRKNRLEWRAE MHGDVLARIRPGQAVRVRRMDGGVIDGRVRQVAPTVDANTRNGLVYVDLPPEAGAAGV KAGMYLSGDVLLGDAPATTLPETAVFSRDGYDYAMVVGPQGRVRQAKVALGRRQDGQV EIVQGIGPNDAVVASGAAFLTDDDLVRVVGAGVTASASAAAGARP" sig_peptide complement(15754..15825) /locus_tag="Rpic12D_3472" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.983) with cleavage site probability 0.657 at residue 24" gene complement(16890..18467) /locus_tag="Rpic12D_3473" /db_xref="GeneID:8021159" CDS complement(16890..18467) /locus_tag="Rpic12D_3473" /inference="protein motif:TFAM:TIGR01845" /note="TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: rso:RS01780 outer membrane channel lipoprotein" /codon_start=1 /transl_table=11 /product="RND efflux system, outer membrane lipoprotein, NodT family" /protein_id="YP_002983408.1" /db_xref="GI:241665049" /db_xref="InterPro:IPR003423" /db_xref="InterPro:IPR010131" /db_xref="GeneID:8021159" /translation="MKTGRHARGQAVAHPARCVLAALTALVAGCAVGPDYSPPQLSGT EAPRGWHATLPHHGSRLALARWWEQFQDPVLAQLVEQADASSPTVAQAVGRVREARAV VSSSQAALLPQSKGSGSATRQGGFGGSQFGTGAGFGGLSSGAALGPALGLGTITTLAA QADASWEIDLFGGKRRSLEGADARLAASEADWHDARVSLAAEVASTYLQQRQCEALVG IDAATLASRQETLQLTERKFRAGFAAPADDAQAQASVADAINVLEGQRAQCAQGIDKL VTLTGLDHDALNGLLAKANAQIPAPPDAGVPDVPARVLSQRPDVASAERAVAGASADI GVAVASRLPSITLAGSIGINAFRFSGQSATTKSWSFGPSVSLPIFDGGAGAARVETAR ARYDQALASYRAKVRQAVQEVEDALVRLDAADRRLDAATKADAQYAKVLDAASARYRL GAGSLLQLEDVRRTALQASQSLAAVRLERAQAWVALYKAVGGGWREDAAGANGQPDPS NAPARAAQRPAPNGNAS" gene complement(18600..18755) /locus_tag="Rpic12D_3474" /db_xref="GeneID:8021160" CDS complement(18600..18755) /locus_tag="Rpic12D_3474" /inference="similar to AA sequence:KEGG:Bxe_B0444" /note="KEGG: bxe:Bxe_B0444 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983409.1" /db_xref="GI:241665050" /db_xref="GeneID:8021160" /translation="MLSTILIIVLILLLIGALPSWPYSRSWGYGPTGGLGLIVVIVVI LVLLGYI" sig_peptide complement(18600..18686) /locus_tag="Rpic12D_3474" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.838) with cleavage site probability 0.517 at residue 29" gene 18942..19823 /locus_tag="Rpic12D_3475" /db_xref="GeneID:8021161" CDS 18942..19823 /locus_tag="Rpic12D_3475" /inference="protein motif:PFAM:PF03807" /note="PFAM: NADP oxidoreductase coenzyme F420-dependent; KEGG: rso:RS01781 hypothetical protein" /codon_start=1 /transl_table=11 /product="NADP oxidoreductase coenzyme F420-dependent" /protein_id="YP_002983410.1" /db_xref="GI:241665051" /db_xref="InterPro:IPR004455" /db_xref="GeneID:8021161" /translation="MPSIAIESAASLGWIGAGRLARALALRAHEAGVRTVAVASRTAQ PAAWLADATGAKLLDPQGVADTAQWVFITVPDDAIADVVAGVHWRPGQLVLHCSGAGE RDLLEAARRAGASTASFHPLFLFAGLPDDAERLRGASIAIDADAPHDAALANFALRLG CPPLKVRAGQRALYHAGANYAASFLLCALHEAATLWEAAGIDRQAAVAAMWPLVEGTL AAARARGLAGALAGPVSRGDGGVIDRHLQALEALGGDHATLYTALTRRALALAAERGA PSADVLADLSGRLSPAP" gene 19910..21124 /locus_tag="Rpic12D_3476" /db_xref="GeneID:8021162" CDS 19910..21124 /locus_tag="Rpic12D_3476" /inference="protein motif:PFAM:PF07690" /note="PFAM: major facilitator superfamily MFS_1; KEGG: rso:RS01782 putative CynX-related transport transmembrane protein" /codon_start=1 /transl_table=11 /product="major facilitator superfamily MFS_1" /protein_id="YP_002983411.1" /db_xref="GI:241665052" /db_xref="InterPro:IPR011701" /db_xref="GeneID:8021162" /translation="MSATPSSPASPHAERRSAGALALLVVGLILVGVNLRPALSSLSP VLKQVAAGTGLSGAAAGLLTTLPVVCLGVFAPAAAVLARRFGAERAVGGLLIALAAGI ALRSAGGVAPLFIGTLAAGACIGVTGVLLPGIVKRDFGRQADLMTGVYTMALCFGAAV AAGASAPLSAWLGGWQPALAFWALPALLAFVGWWPHMRHAHGKGAAMRIERVSLWNQP IAWQVTLHMGLQSSLAYCVFGWLPVILQDRGLSPVQSGVVVAVSILVQLITALGGPFI ARLGRDQRPAVLLMMLMCWAGLLGCLYAPLSTLWWWAVLLGLGQGGNFSVALSLIVLR SADVRVAASLSAMTQGIGYVMAAAGPYLMGVLHDLTGSWAVMGWLFSAIALASMAVGS LAGRDRTLHADA" gene complement(21135..21701) /locus_tag="Rpic12D_3477" /db_xref="GeneID:8021163" CDS complement(21135..21701) /locus_tag="Rpic12D_3477" /EC_number="3.2.2.20" /inference="protein motif:TFAM:TIGR00624" /note="KEGG: rso:RSp0666 DNA-3-methyladenine glycosylase I protein; TIGRFAM: DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase" /codon_start=1 /transl_table=11 /product="DNA-3-methyladenine glycosylase I" /protein_id="YP_002983412.1" /db_xref="GI:241665053" /db_xref="InterPro:IPR004597" /db_xref="InterPro:IPR005019" /db_xref="GeneID:8021163" /translation="MSRCCWVNDDPLMIAYHDTEWGTPSHDDRHLFEMLVLEGAQAGL SWQTILRKRARYQEVFDGFEPARVARFTPARIEKLLAEPGIVRNRAKVEGAVINARKV LALQAEAGSLDAFLWGFVGGKPVVNRWESYRDAPAATDASKAMSKALVGRGFKFVGPT ICYAFMQATGMVDDHEAGCFRAGQAKTP" gene complement(21713..22684) /locus_tag="Rpic12D_3478" /db_xref="GeneID:8021164" CDS complement(21713..22684) /locus_tag="Rpic12D_3478" /inference="protein motif:PFAM:PF01544" /note="PFAM: Mg2 transporter protein CorA family protein; KEGG: rso:RS01784 magnesium/cobalt transporter CorA" /codon_start=1 /transl_table=11 /product="Mg2 transporter protein CorA family protein" /protein_id="YP_002983413.1" /db_xref="GI:241665054" /db_xref="InterPro:IPR002523" /db_xref="GeneID:8021164" /translation="MPMVINSALYRSGKRERDLSVDAISDVLHSPGSFVWLGLHEPDN AMLARVQEEFGLHDLAIEDARNAHQRPKLEVYGDSLFIVLNTAQLERGNVIFGETHLF VGKDFLVSVRHGPSASYAPVRERCERTPQLLAKGAPFALYAVLDFVVDNYQPVLESLQ EEFEAIESRIFGDSFDRASIERLYTLKRQLLRLRNAALPVEDIAGQLVRLHEDFVPKE LRAYFRDIADHAHRVVGALDVIREMLTTAISVNVALVSVTQNDIVKRLAGWGAILAIP TVVFSNYGMNFKDMPELEHPAGYPIVLTCTVLACVALYRKLRKSGWI" gene complement(22703..23200) /locus_tag="Rpic12D_3479" /db_xref="GeneID:8021165" CDS complement(22703..23200) /locus_tag="Rpic12D_3479" /inference="protein motif:PFAM:PF01047" /note="PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: rso:RS01785 transcription regulator protein" /codon_start=1 /transl_table=11 /product="transcriptional regulator, MarR family" /protein_id="YP_002983414.1" /db_xref="GI:241665055" /db_xref="InterPro:IPR000835" /db_xref="GeneID:8021165" /translation="MTSERERFAVMHQFGRTYRAFMAAFEAHVGQPMPRWRILLALHD HAGGGMAQKQLAERLQMDPGALTRQLKVLDQLGWIERTTDARDNRLTNVSLSDAGLAV VLDCMPRRIAFINATLDGLPDDLVRALSEALAQIETRIAEVPSLASADAKSSQTKAPR QPEAR" gene complement(23263..24855) /locus_tag="Rpic12D_3480" /db_xref="GeneID:8021166" CDS complement(23263..24855) /locus_tag="Rpic12D_3480" /inference="protein motif:PFAM:PF07690" /note="PFAM: major facilitator superfamily MFS_1; KEGG: rso:RS01786 transport transmembrane protein" /codon_start=1 /transl_table=11 /product="major facilitator superfamily MFS_1" /protein_id="YP_002983415.1" /db_xref="GI:241665056" /db_xref="InterPro:IPR007114" /db_xref="InterPro:IPR011701" /db_xref="GeneID:8021166" /translation="MAVHTALPHSHTQVLPFKESLLAMIGICFVVVLVAFDQTVVGTA LPTVVAELKGFELYAWVATSYLLTSVVTVPIFGRLGDFYGRKPFVIASIVVFTLASVM CGMAGSMNFLVWSRALQGIGGGMLVGTAYACIPDLFPDARVRLRWQVMLSASFGIANA IGPTLGGWMTQAFGWRSVFYVNVPFGALGLWFAWRFLPHLRQNAHVGRIRLDWQGAVL ITVALGALQLFVEWLPRHGVSGPLFGWLALSAAAFFGLWWWEQRAEQPLLPFDMLRNP SLAALFVLATLSGFSMFAVLFYAPLLFQGGFGMSPQEAGLVITPLVVCITLGSIINGR IVTRIPKPNAMLYAGFALLTLALAGMAVSSKAMPHAVLTGLMLLAGLGLGFVLPNLTV FAQQTAGRAHLGIATALLQSLRMVGGMVGTALVGTLVSERYAAGVGEALRADGATQWL RQLADPEILIDHDAQAALLTQMHAAGHDGAALVEAARHVLVSAIHIGLVAATVVALVA LWRVCRVPPVVLHHVEPVQHTE" gene complement(25044..27629) /locus_tag="Rpic12D_3481" /db_xref="GeneID:8021167" CDS complement(25044..27629) /locus_tag="Rpic12D_3481" /inference="protein motif:TFAM:TIGR00117" /note="TIGRFAM: aconitate hydratase 2; PFAM: Aconitase B, N-terminal; aconitate hydratase domain protein; KEGG: bcm:Bcenmc03_5605 aconitate hydratase 2" /codon_start=1 /transl_table=11 /product="aconitate hydratase 2" /protein_id="YP_002983416.1" /db_xref="GI:241665057" /db_xref="InterPro:IPR001030" /db_xref="InterPro:IPR004406" /db_xref="InterPro:IPR015929" /db_xref="GeneID:8021167" /translation="MLENFRAHVAARAALGIPPLPLTAQQTAELVELLVNPPAGEEQT LLDLITHRVPAGVDEAARVKAGFLAAVAKGETACALISRQRATELLGTMLGGYNIQPL IELLSDAAVGAVAADALKKTLLMFDQFHDVKELAEKGNANAKAVLQSWADAEWFTSRP EVPESLTITVFKVTGETNTDDLSPAPDATTRPDIPMHALAMLKNARPGITPEEDGKRG PVKFIESLKEKGHLVAYVGDVVGTGSSRKSATNSVLWFTGEDIPYVPNKRFGGVCLGG KIAPIFYNTMEDAGALPIELDVSQMNMGDVVELRPYEGKALKDGKVIAEFQVKSDVLF DEVRAGGRIPLIIGRGLTAKAREALGLAPSTLFRLPHQPADSGKGFSLAQKMVGRACG LPEGQGVRPGTYCEPKMTSVGSQDTTGPMTRDELKDLACLGFSADLVMQSFCHTAAYP KPVDVKTHQTLPNFISTRGGIALRPGDGVIHSWLNRMLLPDTVGTGGDSHTRFPIGIS FPAGSGLVAFAAATGTMPLDMPESVLVRFKGKMQPGVTLRDLVNAIPLYAIKQGMLTV AKQGKKNIFSGRILEIEGLPDLKVEQAFELSDASAERSAAGCTVHLNKEPIIEYLNSN ITLLKWMIAQGYQDARSLQRRIKAMEQWLADPQLLSPDADAEYAAVIEIDLADIHEPI VACPNDPDDVKTLSDVAGATIDEVFIGSCMTNIGHFRAASKLLEGKRDIPVKLWVAPP TKMDQKQLTEEGHYGVFGTAGARTEMPGCSLCMGNQAQVREGATVMSTSTRNFPNRLG KNTNVYLGSAELAAICSRLGKIPTKEEYMADMGVLNANGDKIYQYMNFDQIQDFKEVA DTVQM" sig_peptide complement(25044..25118) /locus_tag="Rpic12D_3481" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.703) with cleavage site probability 0.690 at residue 25" gene 28002..28295 /locus_tag="Rpic12D_3482" /db_xref="GeneID:8021168" CDS 28002..28295 /locus_tag="Rpic12D_3482" /inference="protein motif:PFAM:PF03992" /note="PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bac:BamMC406_5978 antibiotic biosynthesis monooxygenase" /codon_start=1 /transl_table=11 /product="Antibiotic biosynthesis monooxygenase" /protein_id="YP_002983417.1" /db_xref="GI:241665058" /db_xref="InterPro:IPR007138" /db_xref="GeneID:8021168" /translation="MVFEMAHIDILAGKQREFEAAVQQALPLFARAKGCHGAELHHIV ERDTSYVLLVRWETVEDHMVDFRQSEDFQEWRKLVGPFFAKAPEVVHSQVVVK" gene complement(28409..29353) /locus_tag="Rpic12D_3483" /db_xref="GeneID:8021169" CDS complement(28409..29353) /locus_tag="Rpic12D_3483" /inference="similar to AA sequence:KEGG:H16_B0303" /note="KEGG: reh:H16_B0303 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983418.1" /db_xref="GI:241665059" /db_xref="GeneID:8021169" /translation="MQSKNKATLIGLTAVLLWASIVGLIRGVSQNLGAVGGAAMMYSA ASVLLLFSVGFIRLKAFPRRYLVWGSLLFVSYELCLSLSIGFAHTSRQAIEVGMVNYL WPAFTMLSAIAFNRQRANFLIVPGFLMAILGICLVLGGDQGLDFAGMVSNVKDNPLSY GLAFSGAVIWAAYCTVTARIAQGKNGVTLFFMLTALALWIKFFATGGGTLHFSYEAIV YLALAASAMGFGYAAWNVGILHGNVTVLAGASYFIPVFSAALAAALLRTPLSFAFWKG ASMVCAGSVLCWLATRGKGVRMPSASQPPQPSQGAQGQ" sig_peptide complement(28409..28468) /locus_tag="Rpic12D_3483" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.911) with cleavage site probability 0.553 at residue 20" gene complement(29476..30354) /locus_tag="Rpic12D_3484" /db_xref="GeneID:8021170" CDS complement(29476..30354) /locus_tag="Rpic12D_3484" /inference="protein motif:PFAM:PF00126" /note="PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bmj:BMULJ_05672 LysR family transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LysR family" /protein_id="YP_002983419.1" /db_xref="GI:241665060" /db_xref="InterPro:IPR000847" /db_xref="InterPro:IPR005119" /db_xref="GeneID:8021170" /translation="MRLEQLNFHHLFYFWRVAKAGHLTRVATELHTSQSALSAQIRQL EDRLGEPLFAREGRRLVLTDTGQLVLSYAEDIFGLGQEMLGRLVGRSEGMTRLRVGSV ATLSRNYQENWIRPALADPSVVLTLESGVLEGLLARLLQHQLDVVLANETVPSNADRP LHCRFLGSQSISLVGPAGVWKNRSLRIPDDLQGLDIALPGPRHALRSQFDALCASAGV TPHLRAEVDDMAMLRLIARDSGWLTVLPEVVVQDELRAGVLVTVGQSTQLQERFYAIT TTRRHRIEALERLLSD" gene 30452..32035 /locus_tag="Rpic12D_3485" /db_xref="GeneID:8021171" CDS 30452..32035 /locus_tag="Rpic12D_3485" /inference="protein motif:PFAM:PF00361" /note="PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: bmj:BMULJ_05673 NADH dehydrogenase I subunit 5" /codon_start=1 /transl_table=11 /product="NADH/Ubiquinone/plastoquinone (complex I)" /protein_id="YP_002983420.1" /db_xref="GI:241665061" /db_xref="InterPro:IPR001750" /db_xref="InterPro:IPR003916" /db_xref="GeneID:8021171" /translation="MNLLHSALAICLVLPPGLMLLAALLPHVARLGMARLWQGFIGLS IAGACVAAVGVALRGLPDAASSTPFSPWLGASVLGGLLATLVQLLGTCIGAFSARYLQ GESGQRRYLSALAGVLAAVHVLLLADHWTVLLAAWAAIGIALQHLLCFYPDRPFALLA AFKKRLADRLADALLIAAAVLAWREVGSGSLADLWAHVGQVGASPALQVSAVCVVLAV VLRTALLPAHGWLIQVMEAPTPVSAMLHAGVVNLGGYVLIRFAPLLESAAPARWLLVA FGLATAVVAGLVMLTRISIKVRLAWSTVAQMGFMVLECGLGLYSLAALHLVGHSLYKA HAFLSASSVVQDTRLRELQGEQPPAKSSLLAAPLLSVAMVLLVQAGLGGAAWPWWWSV ILALAWAPLLWLPGAGRHSAPMVFSRAAVGLLMVAGLTALAMGAHLLPLGTQDRPDTR SGIVALLGMACLHGLLVAVQMRPRALAAWRRACYAGLYIDEFYTRLALRLWPTHWTPA ARNGAHRTAARTVAMDAQP" sig_peptide 30452..30520 /locus_tag="Rpic12D_3485" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.995) with cleavage site probability 0.963 at residue 23" gene 32056..34638 /locus_tag="Rpic12D_3486" /db_xref="GeneID:8021172" CDS 32056..34638 /locus_tag="Rpic12D_3486" /inference="similar to AA sequence:KEGG:Aave_4033" /note="KEGG: aav:Aave_4033 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983421.1" /db_xref="GI:241665062" /db_xref="GeneID:8021172" /translation="MTTTSLGADAAHTHAMVPSAIPPEGSDAAGPDDTLMQQMQAACA QACRAIAPAWPLDRAIAVNPHWGRVDMPVRRVAARMAVLGGIQVFPTRRSQQQAWVAG RITPADLADALAQLPAARAAGLTEAKCVEALRRHELPPRLPLLIDVLDNDPQRHTRLS WRQAITHQVSQTCAAYFDVHQADWQPERADGLYGFWRDTLQHDHGIGLLMGLPDLGRR LDALPATPLDAEHWALNQLGLPQPVWADYLEAVLLTVNGWASWCAYLGWQAAQEGRED PHLRDLLAIRLAWGAIVQECRDDASTRMAFAALQAEWQQAPSALAEAEAALLVDEVWQ LALEAGYQRQLAHRLAGAGALPPVPQDIEVQAAFCIDVRSEPLRRALECVWPAVQTIG FAGFFGLPVAYTPLGTAARRPQLPGLLAPTMEVSDRIDAAQGPDGMPDPAAERAAERA RRHRLGASAQVDGASRWPSAAFSYVEVAGVGYLGKLWRWLRPSTEARSRADLTGLPSR YRAVCRPHLHAESVETKAALAARVLRAMGLAEHLAPLVLFVGHGSQTSNNAHAAALDC GACCGQTGEVNARSLALLLNEPPVRAALQAHGITVPEDTVFAAALHNTTTDEIEGFDL DRLPPAARARWDHLQSVLKHASDQVRRERAPSLGLDPRAPHDDLLTQLRRRANDGAQT RPEWGLAGNAAFVIAPRHRTQGVVLDGRSFLHDYDASRDHDGSVLELLMTAPMLVTHW INWQYHASMCDPVHLGSGNKLLHNVVGGSIGVFEGNGGDLRIGLSRQSLHDGQRWIHE PLRLTVLIDAPETAIERVVDKHPIVRQLVDNGWLHLWRFGPQDLQRYAAGQWRPLTSR HATC" gene 34705..35892 /locus_tag="Rpic12D_3487" /db_xref="GeneID:8021173" CDS 34705..35892 /locus_tag="Rpic12D_3487" /inference="protein motif:PFAM:PF01757" /note="PFAM: acyltransferase 3; KEGG: rso:RS03732 putative acyltransferase transmembrane protein" /codon_start=1 /transl_table=11 /product="acyltransferase 3" /protein_id="YP_002983422.1" /db_xref="GI:241665063" /db_xref="InterPro:IPR002656" /db_xref="GeneID:8021173" /translation="MNRSSASLQSIQALRAFAALCVVVFHSGLALSHPGIPALAWLTT HVIKRGYVGVDMFFVISGFIIAWVAILGPKGPEPPGEFLIKRVFRMGPPYWLMSVLHS AWLNPVSTSALLTSLAFMPLANADAPYLGYPALYVGWSLNYEAFFYALCALGLLLFGR RALWLVALALFTTTIIVPFWHSGVVHRDPAALYTWASPVQAMAANPLVLEFLLGAGLA WLYAAHRQRLTPTIARGLAAIGVAAFIISVLAPIPKFDALGRGLPAGALLAGLVAMEH CGKLRVPRTAVWLGELSFALYLVHPSVIEATHRLAGVLPPEWIGAQLMLFAVNLALTL AIAMMLHRYVERPSIALGRRLVEWTRMRQHAWRARPGFQKPRRETARSGPFPRDASGR VRP" sig_peptide 34705..34803 /locus_tag="Rpic12D_3487" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.993) with cleavage site probability 0.972 at residue 33" gene complement(35882..36700) /locus_tag="Rpic12D_3488" /db_xref="GeneID:8021174" CDS complement(35882..36700) /locus_tag="Rpic12D_3488" /inference="protein motif:PFAM:PF08241" /note="PFAM: Methyltransferase type 11; UbiE/COQ5 methyltransferase; Methyltransferase type 12; KEGG: rme:Rmet_3846 methyltransferase type 11" /codon_start=1 /transl_table=11 /product="Methyltransferase type 11" /protein_id="YP_002983423.1" /db_xref="GI:241665064" /db_xref="InterPro:IPR004033" /db_xref="InterPro:IPR013216" /db_xref="InterPro:IPR013217" /db_xref="GeneID:8021174" /translation="MQAHGTDKVFSGSIPALYDTLMVPLIFEPYAADLAARSAALAPT RVLEVAAGTGVVTRALSRALPEASTLVATDLNPAMLERAAAVGADRPVTWQQADAQQL PVDDASVDMVICQFGAMFFPDRAKAFAEARRVLKPGGTLLFNVWDRIEENAFAHVVTL ALAAHFPNHPPAFLARTPHGYHDPSRVEADLRLDGFASPVTCDIVTARSRADTARTPA FAYCHGTPLRNELEAFGPDALSEATDLCTQALAAQFGAGPVDGKIQALVFSVTA" gene 36845..37347 /locus_tag="Rpic12D_3489" /pseudo /db_xref="GeneID:8021175" gene 37411..38034 /locus_tag="Rpic12D_3490" /db_xref="GeneID:8021176" CDS 37411..38034 /locus_tag="Rpic12D_3490" /inference="protein motif:PFAM:PF00440" /note="PFAM: regulatory protein TetR; KEGG: rso:RS03754 transcription regulator protein" /codon_start=1 /transl_table=11 /product="transcriptional regulator, TetR family" /protein_id="YP_002983424.1" /db_xref="GI:241665065" /db_xref="InterPro:IPR001647" /db_xref="GeneID:8021176" /translation="MSRVKNEDEFELRRESVLDTAAEAFAADSYPSVSMNQLAAACGG SKSRLYHYYEGKEAILFDLLDRYTKRLADLVERAERDARHARLSARATLHLLIRTFLA EYATSRTRHVALLNDVKYLSPDQRDIVLARERDVVAAVGQQLGAAYPDKVDDANRTPV TMMLFGMMNWTFTWLKPDGPLSYEGYAEMVIDMLENGLGRGAAQRSS" gene complement(38019..39113) /locus_tag="Rpic12D_3491" /db_xref="GeneID:8021177" CDS complement(38019..39113) /locus_tag="Rpic12D_3491" /inference="protein motif:TFAM:TIGR02160" /note="TIGRFAM: phenylacetate-CoA oxygenase/reductase, PaaK subunit; PFAM: ferredoxin; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: rso:RSp0608 ferredoxin reductase protein" /codon_start=1 /transl_table=11 /product="phenylacetate-CoA oxygenase/reductase, PaaK subunit" /protein_id="YP_002983425.1" /db_xref="GI:241665066" /db_xref="InterPro:IPR001041" /db_xref="InterPro:IPR001433" /db_xref="InterPro:IPR001709" /db_xref="InterPro:IPR001834" /db_xref="InterPro:IPR008333" /db_xref="InterPro:IPR011884" /db_xref="GeneID:8021177" /translation="MTPQFHPLRVAEVRGETADTISVRFDVPDDLRNTYRFTQGQFLT LRVPPGQLAGHDELRRSYSICCAVQDYDRHGELRVAVKRVDAGVFSNHLHDRIRVGQT LDVLPPDGRFFVPLAAESARHYVAFAAGSGITPILSLIKTTLAAEPGSRFTLVYGNRS VDSIIFAEALEDLKDRYLDRFALYHVLSRQPQEVTLFNGRLDADKVRAFLATLIPPAD IDAAFICGPSSMIDAVERALVEAGVPRARVHAERFGVPVGDGPVKPRQRAAVAGEVAL TVVLDGKSHEVPMSGDAKVLDSALGAGLDLPYACKGGVCCTCRAKVLEGRVEMEKNFT LEDWEIEQGFVLTCQARPLTQRVVVSYDDR" gene complement(39123..39674) /locus_tag="Rpic12D_3492" /db_xref="GeneID:8021178" CDS complement(39123..39674) /locus_tag="Rpic12D_3492" /inference="protein motif:TFAM:TIGR02159" /note="TIGRFAM: phenylacetate-CoA oxygenase, PaaJ subunit; PFAM: protein of unknown function DUF59; KEGG: rso:RSp0607 phenylacetic acid degradation protein" /codon_start=1 /transl_table=11 /product="phenylacetate-CoA oxygenase, PaaJ subunit" /protein_id="YP_002983426.1" /db_xref="GI:241665067" /db_xref="InterPro:IPR002744" /db_xref="InterPro:IPR011883" /db_xref="GeneID:8021178" /translation="MVAATATAADAQVRLARARAALDAVTDPEIPVVTIAELGILRGV QIDDAGTLVITITPTYSGCPAMDQIADDVRRTLQAADVGTYRVCSVLSPAWTTDWITA EGHRKLREFGIAPPSHAAVAGETAQAGRPVQLMRPARAELVACPQCGSHDTVPISAFG STACKALYRCRACREPFDYFKPY" gene complement(39668..40468) /locus_tag="Rpic12D_3493" /db_xref="GeneID:8021179" CDS complement(39668..40468) /locus_tag="Rpic12D_3493" /inference="protein motif:TFAM:TIGR02158" /note="TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit; PFAM: phenylacetic acid catabolic family protein; KEGG: rso:RSp0606 phenylacetic acid degradation protein" /codon_start=1 /transl_table=11 /product="phenylacetate-CoA oxygenase, PaaI subunit" /protein_id="YP_002983427.1" /db_xref="GI:241665068" /db_xref="InterPro:IPR007814" /db_xref="InterPro:IPR011882" /db_xref="GeneID:8021179" /translation="MTADAHLQYVLRLADNALILGQRNAEWTGHGPVLEEDIALSNLS LDLIGQARLLYTHAGQLEGALTGTPRSEDDYAYWRAEQAFRNYTLLELPHAGPMVATS AAARDYAVTIVRHFLYAALMVPMWEALTRSADAELAAIAAKSLKEMRYHLAHTRDWLV RFGDGTEVSHARAQAALDWLMPYTNEFFATDTVEDAVVEAGIGVRPADVRHGWDATVR SALDEATLAWPEPGSYVSTGKHGVHSEHMGFLLAEMQGLARQFPGASW" gene complement(40478..40765) /gene="paaB" /locus_tag="Rpic12D_3494" /db_xref="GeneID:8021180" CDS complement(40478..40765) /gene="paaB" /locus_tag="Rpic12D_3494" /inference="protein motif:TFAM:TIGR02157" /note="TIGRFAM: phenylacetate-CoA oxygenase, PaaH subunit; PFAM: phenylacetic acid degradation B; KEGG: rso:RSp0605 phenylacetate-CoA oxygenase subunit PaaB" /codon_start=1 /transl_table=11 /product="phenylacetate-CoA oxygenase, PaaH subunit" /protein_id="YP_002983428.1" /db_xref="GI:241665069" /db_xref="InterPro:IPR009359" /db_xref="GeneID:8021180" /translation="MQQHEWPLWEVFIRSKQGLEHKHCGSLHAADARQALQMARDVYT RRQEGVSIWVVPSAAITASEPDDKAMLFDPMADKIYRHPTFYRLPDEVNHM" gene complement(40782..41801) /gene="paaA" /locus_tag="Rpic12D_3495" /db_xref="GeneID:8021181" CDS complement(40782..41801) /gene="paaA" /locus_tag="Rpic12D_3495" /inference="protein motif:TFAM:TIGR02156" /note="TIGRFAM: phenylacetate-CoA oxygenase, PaaG subunit; PFAM: phenylacetic acid catabolic family protein; KEGG: rso:RSp0604 phenylacetate-CoA oxygenase subunit PaaA" /codon_start=1 /transl_table=11 /product="phenylacetate-CoA oxygenase, PaaG subunit" /protein_id="YP_002983429.1" /db_xref="GI:241665070" /db_xref="InterPro:IPR007814" /db_xref="InterPro:IPR011881" /db_xref="GeneID:8021181" /translation="MYTQSLDQPGGLPTEQELANVPLGEAEWQARFDARIGADQKIEP QDWMPAPYRKTLLRQISQHAHSEVVGMLPEGNWISRAPSLKRKAILLAKVQDEAGHGL YLYSAAETLGSSRDEMIDALHEGRAKYSSIFNYPTLSWADVGVIGWLVDGAAIMNQVP LCRCSYGPYARAMIRICKEESFHQRQGFESLLTMMGGTQAQRDMVQDAVNRWWFPVLM MFGPPDTASPNSAQTMAWGIKRISNDDLRQRFVDAIVEQARVLGVSLPDPGLVWNEQR GHYDFSPLDWSEFKRVLDGHGPCNRERLATRKRAHEEGKWVREAALAYARKQAERAAA LEQAA" gene complement(41946..43394) /locus_tag="Rpic12D_3496" /db_xref="GeneID:8021182" CDS complement(41946..43394) /locus_tag="Rpic12D_3496" /inference="protein motif:TFAM:TIGR00711" /note="TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bbr:BB2411 putative transmembrane efflux protein" /codon_start=1 /transl_table=11 /product="drug resistance transporter, EmrB/QacA subfamily" /protein_id="YP_002983430.1" /db_xref="GI:241665071" /db_xref="InterPro:IPR001411" /db_xref="InterPro:IPR004638" /db_xref="InterPro:IPR007114" /db_xref="InterPro:IPR011701" /db_xref="GeneID:8021182" /translation="MMHGIDERRRWLALIVLCLGVLMIVLDTTIVNVALPSIRADLGF TETSLVWVVNAYMLTFGGFLLLGGRLGDLFGHRRLFLAGITLFTLASAACGLANAQGL LITARAVQGLGGAVVSAVSLSLIMNLFTSPSDRAKAMGIYGFVCAGGGSIGVLLGGLL TSALSWHWIFLVNLPIGVAVYAACVALLPAGQPQATRARLDVAGAITVTASLMLAVYA IVHGNEAGWTSTPTLGQLAMAVALMMAFLIIESRVPHPLMPLRMFALRNVATANVVGV LWAAAMFAWFFISALYMQRVLHYSAMQVGLAFLPANIIMAVFSLGLSAKLVMRFGIRA PLSIGLLMAALGLALFARAPAGGGFLLDVLPGMVLLGLGAGVAFNPVLLAAMSDVAPD ESGLASGVVNTSFMMGGALGLAILASLAAARTESLAGANADAVTALNGGYHLAFMLGA GAAVLASVLAAVFVRTRAHGPAQGDAPSPASI" gene complement(43494..43925) /locus_tag="Rpic12D_3497" /db_xref="GeneID:8021183" CDS complement(43494..43925) /locus_tag="Rpic12D_3497" /inference="protein motif:PFAM:PF06983" /note="PFAM: 3-demethylubiquinone-9 3-methyltransferase; Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rso:RSp0601 hypothetical protein" /codon_start=1 /transl_table=11 /product="3-demethylubiquinone-9 3-methyltransferase" /protein_id="YP_002983431.1" /db_xref="GI:241665072" /db_xref="InterPro:IPR004360" /db_xref="InterPro:IPR009725" /db_xref="GeneID:8021183" /translation="MLVQPYLFFEGRCEEALEFYKKTLGAKVDAMMRYKEAPAGAEPK AEQCGGMVPPADKVMHAAFHVGDTVVMASDGMCAGKPDFKGFGLSVTVPGTADAERTF KALGDGGQVTMPMTETFFANAFGMVVDRFGVMWMVIAPKPM" gene complement(44074..44457) /locus_tag="Rpic12D_3498" /db_xref="GeneID:8021184" CDS complement(44074..44457) /locus_tag="Rpic12D_3498" /inference="protein motif:COG:COG4319" /note="KEGG: rso:RS03879 hypothetical protein" /codon_start=1 /transl_table=11 /product="Ketosteroid isomerase-like protein" /protein_id="YP_002983432.1" /db_xref="GI:241665073" /db_xref="GeneID:8021184" /translation="MAHATRTPDDENRLRELTESWASAARNKAIDAVMRHDASDVVVF DVMPPRFVKGADAYRRHWQDRCDALEGSADSRFVELHLEVGSDVAYCFSVNRLRALPR WRPPRCANARHGVHLQARRTLAGCA" gene 44579..45223 /locus_tag="Rpic12D_3499" /db_xref="GeneID:8021185" CDS 44579..45223 /locus_tag="Rpic12D_3499" /inference="protein motif:PFAM:PF00440" /note="PFAM: regulatory protein TetR; KEGG: rso:RS03880 putative transcription regulator protein" /codon_start=1 /transl_table=11 /product="transcriptional regulator, TetR family" /protein_id="YP_002983433.1" /db_xref="GI:241665074" /db_xref="InterPro:IPR001647" /db_xref="GeneID:8021185" /translation="MTQEPPRPPARSTYRHGDLRRALLDAGIELARAGGPDAIVLREA TRRAGVVPNAAYRHFAGRQDLLQAVRAAALAALARAMEAELNAINATLPEDVQARASL RAIGVGYLRFAQMETGLFRTAFAVPDEVENDVDPDKAGNSGLNPFQLLGAALDRMTAA GVLPAERRPGAEYLAWSAVHGLALLIIDGPLRGRPPEETGAIALRVVEMVEKGL" gene 45300..45821 /locus_tag="Rpic12D_3500" /db_xref="GeneID:8021186" CDS 45300..45821 /locus_tag="Rpic12D_3500" /inference="similar to AA sequence:KEGG:Reut_B4200" /note="KEGG: reu:Reut_B4200 transmembrane protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983434.1" /db_xref="GI:241665075" /db_xref="GeneID:8021186" /translation="MQTRFSGWLGALAAAFALGACASLAPVQTAQKMIGQPESAVRAT FGAPTETYQLAGGTQRWIYSKQPMGHEVYAADFDASGKLTGFRQMLTELEIYQARPGV WTKHDVAEHFGMPREPTQYYPLMKREAWSYRMYTSGFQQAHFNALFDDNGVLDRTMIV VDPLGGNEHDSPK" sig_peptide 45300..45368 /locus_tag="Rpic12D_3500" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.761 at residue 23" gene complement(45876..46826) /locus_tag="Rpic12D_3501" /db_xref="GeneID:8021187" CDS complement(45876..46826) /locus_tag="Rpic12D_3501" /inference="protein motif:PFAM:PF01584" /note="PFAM: CheW domain protein; response regulator receiver; SMART: CheW domain protein; response regulator receiver; KEGG: rso:RS03881 putative response regulator transcription regulator protein" /codon_start=1 /transl_table=11 /product="response regulator receiver modulated CheW protein" /protein_id="YP_002983435.1" /db_xref="GI:241665076" /db_xref="InterPro:IPR001789" /db_xref="InterPro:IPR002545" /db_xref="GeneID:8021187" /translation="MTMSQHEVDERTNLTNNNRFELLLFRLGESARSNQREMFGINVF KVREIMVMPPVTHVADAGAHILGAVNVRGQIIPVIDLASVIGTKNSSANILLITEYAR TTQGFAVEEVDEIVRLEWSQIFPAEASVGSSNITSLARLDGNADNSRLAQVIDVEQIL VDVFPTRRADLAPDNDERLVKIPPGAKLLVADDSGLARSLIANGLEAMGAPYVMTKSG QEAWDTLQKIARDAAREGKTVRDKIALVLTDLEMPEMDGFTLTRKIKSEPAFQSIPVV IHSSLSGSANEDHVRRVGANGYVAKFEANELAQAIASALG" gene 47276..47352 /locus_tag="Rpic12D_R0063" /note="tRNA-Undet1" /db_xref="GeneID:8021188" tRNA 47276..47352 /locus_tag="Rpic12D_R0063" /product="tRNA-OTHER" /db_xref="GeneID:8021188" gene complement(47566..48864) /locus_tag="Rpic12D_3502" /db_xref="GeneID:8021189" CDS complement(47566..48864) /locus_tag="Rpic12D_3502" /inference="similar to AA sequence:KEGG:BMULJ_03774" /note="KEGG: bmj:BMULJ_03774 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983436.1" /db_xref="GI:241665077" /db_xref="GeneID:8021189" /translation="MNMMSSNPRSSLHALAPIGIGTAEVESLLSYLWRLAASHSVSVT EMSRAVSDTIGQELSANYNWQRLHLSGNGEAARNWSGALSALTSVSHLDRLTLLPWED VIAQQSLTTVQARWCPHCLDEDRAAGRSPHMRLAWDVGSVTACPRHKSQIVHVCPECG RTDARHKYAYVVPGWCAHCGAFLGDCKESVPAALEEIWKASQVGEMLRAQATLECPPT RESLQDTIQELVTRLDNGKSAAFARRIGVSKGTVHHWLKDGGTPTLPALLQIAGHAGL SLAKVLTGDLTNWSPPADTCKQVTMLFHRSTQPAPRRTLNWEDIRSQLVAMQGDLVPV SVAEAARRLNVDVRQIYQNANKEARVLAERWRQHMRRRGEQSVERARDAIDAACQDIL SEGRAINLREIRKRVPQEVLGSVKGVITLLQEARHRLEAN" gene complement(48861..49898) /locus_tag="Rpic12D_3503" /db_xref="GeneID:8021190" CDS complement(48861..49898) /locus_tag="Rpic12D_3503" /inference="protein motif:SMART:SM00382" /note="SMART: AAA ATPase; KEGG: bmj:BMULJ_03775 probable ATPase" /codon_start=1 /transl_table=11 /product="AAA ATPase" /protein_id="YP_002983437.1" /db_xref="GI:241665078" /db_xref="InterPro:IPR003593" /db_xref="GeneID:8021190" /translation="MNKQTYPLTPVKASASILPTKRIKHTRVTQVMDELSTLIYPDSQ ESILLVCGPTGAGKTTLAKFMVENAHSQSHAEMELNAGVIPAIYVQAPASGETKFSWR LFYQRILNQLGDDLDSPKVAYGVDSLSGRLVRPRGTSGNSLAALRTAVERGLRARQVQ FMVIDEAAHIFRDTQRNSKLEVQLDTLKSLVNECGTQIVLVGSYDLYHLVSLSGQIAR RTHVLHFERYREDCPEGVQAFERCLLSFDKALPELWGGQLNRYAQQLMANTLGCVGTL SSVLTRAARLAEADGNWSLEALKRALLNEAQHKRILEEIIEGEAAIGPSLPRVLPTMQ RSTAKAERLTA" gene complement(49908..52610) /locus_tag="Rpic12D_3504" /db_xref="GeneID:8021191" CDS complement(49908..52610) /locus_tag="Rpic12D_3504" /inference="protein motif:PFAM:PF00665" /note="PFAM: Integrase catalytic region; TnsA endonuclease; KEGG: bmu:Bmul_4740 integrase catalytic region" /codon_start=1 /transl_table=11 /product="Integrase catalytic region" /protein_id="YP_002983438.1" /db_xref="GI:241665079" /db_xref="InterPro:IPR001584" /db_xref="InterPro:IPR014833" /db_xref="GeneID:8021191" /translation="MLDKAQLTELFDRFSTPPAGRKLILDARVQAPVRDVKSRGGNVI TLLASRKMGGDVEIATESRHIEFAAAVGLEYDNNVLEFYTQPCQLKLELIDEATGKTH SSTHVPDFLSIRNDGFMLEEWKSDVKLERLAERFPYRYVRSSDGLWRSPQIESQLAEL GIRYRIFSDSAMPRRRVENLLYLAHYFGPAAEPCPEEALAQLQLALREHGHLTFSELL APPYDFSADLLNKAIADNLVATDLDSETLTEKRLFNLYRDDVLRDFMVANVKSSGTSP LTPFALDIADGTKFLFEGQELTIVVVGEGSVVCNRPDGSSITLTREWLLSAHERNHIT GIESARTQNRGLGSYSKEQLTTALQRQALLESPARSSGVSERSLRRWSARQNVANANG ADKVLALVPHCKQRGNRKRRLSDLQLAVMERVIDEHWRTSEAINYKTCYRFLVVASEK EGVKSPSYPTLIQHIQALETNRDVRVRHGKRLAYLQDTFVDVLYYDTPVHGSRPFQYV HIDHTQLDIEVVSSRTGDALGRPWLTVAIDAWSRRILAFYLTFDPPSYISVMMAIRDM VRRFSRLPEFIVVDNGTDFLSDAFKTFLRAMGTHLRFRPAGRPRHGAVLERLFGRLNT EYIHNLAGNTKATKNVRAVSGSHLPKKLAQWTLEALYRGVEYWATEYYDNEPHQALNE SPRDAFQRGLRESGLRPQRQVVFNRDFLIATCPPVDRKGTRMVNQQRGVKVDDRFYWS GVFTSPKVAGANIPVRYDPWDASSVYVLVRDHWHHAACRNLYDLGQLTEAEQKAFSEE FRSRTGTRPTDKGAAQRLREFMRIFTPEGAMAVQFERQAENKALYNSLQMSSVTPVIA PHRFDFEDTASSTTSSRRDQKTTTAPTPPQRPAVLGDSTEFEDF" gene 52759..53058 /locus_tag="Rpic12D_3505" /db_xref="GeneID:8021192" CDS 52759..53058 /locus_tag="Rpic12D_3505" /inference="ab initio prediction:Prodigal:1.4" /note="KEGG: bmj:BMULJ_03776 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983439.1" /db_xref="GI:241665080" /db_xref="GeneID:8021192" /translation="MNATPLNGSAPAEAAAYAEWEDRAKELVLWGMAQRKLTYKELAR RLERYGIEESADQINRKVNRKRFSAAFLLVCLAAMEVESVPVPTKSAQRKLRPPR" gene 53893..54282 /locus_tag="Rpic12D_3506" /db_xref="GeneID:8021193" CDS 53893..54282 /locus_tag="Rpic12D_3506" /inference="similar to AA sequence:KEGG:Rmet_5461" /note="KEGG: rme:Rmet_5461 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983440.1" /db_xref="GI:241665081" /db_xref="GeneID:8021193" /translation="MGVPESVRGAESKIQRGSFRFSFFIQILKALDSEYPAQWEPYLE TDDSWETAAARILRHELDASDMDIHTFAMRLSEMEISIEAETLESIVSLGEFPFSLVL QLSSFAPVSQLCRFVDQKDIEETAGIR" gene complement(54557..54886) /locus_tag="Rpic12D_3507" /db_xref="GeneID:8021194" CDS complement(54557..54886) /locus_tag="Rpic12D_3507" /inference="similar to AA sequence:KEGG:Bphy_6961" /note="KEGG: bph:Bphy_6961 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983441.1" /db_xref="GI:241665082" /db_xref="GeneID:8021194" /translation="MSFGPATPVYLQSSATLIRWRVFETETGERHFAGYCTESGHGRV TSAITSFDLQTGIGISSSGRAYQLRGKSQFDDDADYVWVLWSLYNRVEWSKDVSHEYR ALDVGEP" gene complement(55244..55396) /locus_tag="Rpic12D_3508" /db_xref="GeneID:8021195" CDS complement(55244..55396) /locus_tag="Rpic12D_3508" /inference="ab initio prediction:Prodigal:1.4" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983442.1" /db_xref="GI:241665083" /db_xref="GeneID:8021195" /translation="MGAALSLPASTEQILNRLVDKCGAYSAALRLGDSAARDDHYSFY AGRLTC" gene complement(55650..55940) /locus_tag="Rpic12D_3509" /db_xref="GeneID:8021196" CDS complement(55650..55940) /locus_tag="Rpic12D_3509" /inference="similar to AA sequence:KEGG:BPSL0566" /note="KEGG: bps:BPSL0566 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983443.1" /db_xref="GI:241665084" /db_xref="GeneID:8021196" /translation="MHETHVFHLALLTASVKKSFMRVPRFMMLDGIDDGGMEHARSHR LQEIIVDECSTYDADYQLIFATSDINPKFEASELVVGRFFTPEKRSLDVRDI" gene complement(56247..57260) /locus_tag="Rpic12D_3510" /db_xref="GeneID:8021197" CDS complement(56247..57260) /locus_tag="Rpic12D_3510" /inference="ab initio prediction:Prodigal:1.4" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983444.1" /db_xref="GI:241665085" /db_xref="GeneID:8021197" /translation="MKKYIAVLPIFLAVGALTHGEAALSQESITRDTATGDYTISYYA SDDNGNQMLRQIVFVPSTKVRPAIRSEFEARHGGNIVYRYALKNGANAPQAIQVFTLD PVTGVKTQAVAPGKRAVHGEISTPQPWTVLTAGKNGDSIRVVWRYPGAGGLWATQVQP GFGFESTSLPGIVAAGVAGNAPNFPGLGEDGFDPESALGRQLQQLVMHDYVDVWVAAP AISLTNPVNPTAVLTQLKTQVASWPSQKLIDQNVAATLDSQFQAALAALAQGNTQQAI QALRAARQMVSPFHREGQDEDEGPAEERRKEYGNKSSALAARVLQFDLRFLLHNLAGN GDI" sig_peptide complement(56247..56324) /locus_tag="Rpic12D_3510" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.986) with cleavage site probability 0.577 at residue 26" gene complement(57263..58270) /locus_tag="Rpic12D_3511" /db_xref="GeneID:8021198" CDS complement(57263..58270) /locus_tag="Rpic12D_3511" /inference="ab initio prediction:Prodigal:1.4" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983445.1" /db_xref="GI:241665086" /db_xref="GeneID:8021198" /translation="MQKCQAFIPTAIQIEQGGYFKQLTPADAACEVHDGNPQGYGAIW LTILGEPYFTISFWHYASSNIELGWVLPVLNPADGPVPSPALGAIVPSKIRGVSTVHY STATLKAVVKSSSGTAVAGAQVLISIDVTPLSGYHNHASATRPKGILSTDTIPISFQK IQIPGTTDANGEFKFYFTATDFAAEHKITASCTDQTCNQQGKNTVVVRVPGLVPLAEN MHLYILRGASSTHQSNHNFTSAAQNSLVELATRFRDENGGTLLLVNDGSLPMGGLYDF TNNWANPHKAHRRGVVVDINNFTTRNTAFENLCKDLGIFPSWEGGSHPHYHLWLIGQD A" gene 58925..59407 /locus_tag="Rpic12D_3512" /pseudo /db_xref="GeneID:8021199" gene complement(59662..60387) /locus_tag="Rpic12D_3513" /db_xref="GeneID:8021200" CDS complement(59662..60387) /locus_tag="Rpic12D_3513" /inference="protein motif:PFAM:PF05433" /note="PFAM: 17 kDa surface antigen; KEGG: rso:RSc1027 hypothetical protein" /codon_start=1 /transl_table=11 /product="17 kDa surface antigen" /protein_id="YP_002983446.1" /db_xref="GI:241665087" /db_xref="InterPro:IPR008816" /db_xref="GeneID:8021200" /translation="MNNEQPNVQGQHYAGSSTGHMPQSRRMHPLMAAAAVAVIIASVT GVAAMTGVLPTSKAMQGSTGPNVAAQPASTPLALAAPGQTAMPNQAAAAYPTQPSAVH HAVHRPAPSYAEHNPSANADYAQPRPAANPYAGQVTAVTPIATQQGNETGLGMIGGAV VGGLLGNQVGKGNGRTLATVAGAVGGGYAGHEAENYYHRDTSYNVSVRMDNGAIRTFT YKAAPGFQVGDRVHLENGSLAAG" gene complement(60754..60957) /locus_tag="Rpic12D_3514" /db_xref="GeneID:8021201" CDS complement(60754..60957) /locus_tag="Rpic12D_3514" /inference="similar to AA sequence:KEGG:BamMC406_4365" /note="KEGG: bac:BamMC406_4365 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983447.1" /db_xref="GI:241665088" /db_xref="GeneID:8021201" /translation="MADLLVRNVDDCLVQRLRERAAAHGRSPEAEHREILAKALGGTK RKCFAEVLMSMPNAGEDSDFARS" gene 61702..61836 /locus_tag="Rpic12D_3515" /db_xref="GeneID:8021202" CDS 61702..61836 /locus_tag="Rpic12D_3515" /inference="ab initio prediction:Prodigal:1.4" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983448.1" /db_xref="GI:241665089" /db_xref="GeneID:8021202" /translation="MQAQSNFPALASRRAGLVNSSSGDDEQQLNGLSGMLVRKIVARM" gene 61931..62323 /locus_tag="Rpic12D_3516" /db_xref="GeneID:8021203" CDS 61931..62323 /locus_tag="Rpic12D_3516" /inference="similar to AA sequence:KEGG:Mpe_A1934" /note="KEGG: mpt:Mpe_A1934 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983449.1" /db_xref="GI:241665090" /db_xref="GeneID:8021203" /translation="MRSTGFSGLGRGRHTHGLILVDAFYENVAGPDGKNIVLEFRPDP PQTLLVACVWSHWRASKPGEQDLLSFAIITDDPPPEIAEAGHDRCPVAIKQENIDAWL NPEPRNLDASDAILEDKLRPYYVHRLAP" gene 62491..63141 /locus_tag="Rpic12D_3517" /db_xref="GeneID:8021204" CDS 62491..63141 /locus_tag="Rpic12D_3517" /inference="ab initio prediction:Prodigal:1.4" /note="KEGG: bph:Bphy_6783 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983450.1" /db_xref="GI:241665091" /db_xref="GeneID:8021204" /translation="MADLNAALIAFAGVLVGGYFNNFMGEDFRRFRDSQALAGALAGE LESHASAIPTIKGGLETMRKGVEAGAQLRMNEWPQPNSPVFEANVEKIGLLGPELAKD TAFVYEQIRAFRAALHMLSKHHTDRDQDWRVAMIRSCNTCITIAEDKAAPLVESLKCH AAASYLKRSSTIKQCGIGLLLLAVLVVATIRYPGGSERGEQCTTTLDYGALHTVCR" gene complement(63989..64747) /locus_tag="Rpic12D_3518" /db_xref="GeneID:8021205" CDS complement(63989..64747) /locus_tag="Rpic12D_3518" /inference="protein motif:PFAM:PF03988" /note="PFAM: protein of unknown function DUF347; KEGG: rme:Rmet_4979 protein of unknown function DUF347" /codon_start=1 /transl_table=11 /product="protein of unknown function DUF347" /protein_id="YP_002983451.1" /db_xref="GI:241665092" /db_xref="InterPro:IPR007136" /db_xref="GeneID:8021205" /translation="MKTSTENALTKVPEVTLGFWLIKIAATTLGETGGDAVSMSMNLG YLVGTGIFAVFFLATVFAQVKAKGFHPLLYWTTIIATTTVGTTLADFADRSLGIGYAG GSCLLLALLVGSLLLWYRTLGSVSVSTVSSPKAEAFYWLTIMFSQTLGTALGDWTADT AGLGYTGAAVVFVALLAAVVAAYYWSSVSRTLLFWAAFILTRPLGAVVGDFLDKPHNA GGLALSRYSASAALLGFMLTAILLFRQRPASATH" gene 65456..66769 /locus_tag="Rpic12D_3519" /db_xref="GeneID:8021206" CDS 65456..66769 /locus_tag="Rpic12D_3519" /inference="protein motif:PFAM:PF07690" /note="PFAM: major facilitator superfamily MFS_1; KEGG: pol:Bpro_3934 major facilitator superfamily MFS_1" /codon_start=1 /transl_table=11 /product="major facilitator superfamily MFS_1" /protein_id="YP_002983452.1" /db_xref="GI:241665093" /db_xref="InterPro:IPR005829" /db_xref="InterPro:IPR007114" /db_xref="InterPro:IPR011701" /db_xref="GeneID:8021206" /translation="MWTLRQSKAIQNMQFGIRANLGQFTQQLVQVLLVGLTIGMMRNV VPALAESEFGVPRGSFMLLVAFVVAFGFVKGTMNFVAGRMAERLGRKQVLLLGWLVAL PIPPLVYFAGSWSWIVLATILLGVNQGLTWSMTQTAKLDITRADQRGLVIGLNEFSGY VGVALAGVLTGYLASILGPRQGLLWFGSVVIGVATLLAWLSIAETLPWAHDEVRRHAA PNLQVLRPKYPTMVSAQPTTPELFALMTWRDRRMAAFCQAGMVEKFVDALVWAFWPVY LHQHGVTLPGIGWIVGVYGFTWGAAQFFTGKLSDHVGRHRLNIFGMWICGAGVALMPL GAGSVWWSVSAAIAGLGMAMLYPNLSAAVADIAHPNWRASAIGIYRFWRDLGYGTGGL GLGIAAALGGSIQSAFWFVAGAMFLSGLLLYAWGEETHPRLNPGT" gene complement(66887..67447) /locus_tag="Rpic12D_3520" /db_xref="GeneID:8021207" CDS complement(66887..67447) /locus_tag="Rpic12D_3520" /inference="protein motif:TFAM:TIGR00778" /note="TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: rfr:Rfer_3389 alkylhydroperoxidase" /codon_start=1 /transl_table=11 /product="alkylhydroperoxidase like protein, AhpD family" /protein_id="YP_002983453.1" /db_xref="GI:241665094" /db_xref="InterPro:IPR003779" /db_xref="InterPro:IPR004675" /db_xref="GeneID:8021207" /translation="MSYIKTLAAVDQASAEGKQKEILDKARQQVGFIPNMYANMANAP AVLDTYLHGYGLFRGESGFSPAEQEVVFLAVSQVNGCNYCTAAHSMIADKMSGVPAPV LAAIRERQPIPDAKLAALFDLTQDIVRTLGMPNEGKVDAFLDAGYREQDVLYIILAVA VKVLSNYSNHAFGTEVDSRFSAYRVG" gene complement(67773..68324) /locus_tag="Rpic12D_3521" /db_xref="GeneID:8021208" CDS complement(67773..68324) /locus_tag="Rpic12D_3521" /inference="protein motif:TFAM:TIGR02937" /note="TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: shl:Shal_3552 ECF subfamily RNA polymerase sigma-24 factor" /codon_start=1 /transl_table=11 /product="RNA polymerase, sigma-24 subunit, ECF subfamily" /protein_id="YP_002983454.1" /db_xref="GI:241665095" /db_xref="InterPro:IPR007627" /db_xref="InterPro:IPR007630" /db_xref="InterPro:IPR013249" /db_xref="InterPro:IPR014284" /db_xref="GeneID:8021208" /translation="MVKSGAERDNLILAAQTGDPAAISRLLAVCQADARRYAYKHCQA SDVDDAVQESLLVISRKVKGLKAAAAFSAWLFTVIKRECRRLERMMFKHDPLPDEAAE ELLVQRSDEALRVDLANALESLPAHYLEVVLLRDFEELTIAEIAERLGEPQGAVKSRL HRARELVREYMLGSDVASYQSPR" gene complement(68328..68537) /locus_tag="Rpic12D_3522" /db_xref="GeneID:8021209" CDS complement(68328..68537) /locus_tag="Rpic12D_3522" /inference="similar to AA sequence:KEGG:Saro_3962" /note="KEGG: nar:Saro_3962 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983455.1" /db_xref="GI:241665096" /db_xref="GeneID:8021209" /translation="MFYLKNVPNWERVLRVIVGLVCLGYAVMNWGGSSLAIGAGIVGA MLAMTGLFGFCPMCAMVGRKLHKGH" gene complement(68643..69083) /locus_tag="Rpic12D_3523" /db_xref="GeneID:8021210" CDS complement(68643..69083) /locus_tag="Rpic12D_3523" /inference="ab initio prediction:Prodigal:1.4" /note="KEGG: eba:ebA6447 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983456.1" /db_xref="GI:241665097" /db_xref="GeneID:8021210" /translation="MADPLSVKATMVPKEQIKLDFKDGSGHFVLMVKREGTAAGSGLL DGAQIVEYGRHDIVPGVAGDPSGYLVASKGEGNVAYIKWTVRAVFLPGKDGKPEIHDN GFWEVVSGTGSFKGLKGAGTLHIKAANPTDRIFMLDGDMVAAPQ" gene complement(69196..69924) /locus_tag="Rpic12D_3524" /db_xref="GeneID:8021211" CDS complement(69196..69924) /locus_tag="Rpic12D_3524" /inference="protein motif:PFAM:PF02683" /note="PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: mrd:Mrad2831_2559 cytochrome c biogenesis protein transmembrane region" /codon_start=1 /transl_table=11 /product="cytochrome c biogenesis protein transmembrane region" /protein_id="YP_002983457.1" /db_xref="GI:241665098" /db_xref="InterPro:IPR003834" /db_xref="GeneID:8021211" /translation="MDIGLGSYGFGFLAGLLSTLSPCVLPLVPILLGSATSVHRRAPL ALAGGLAISYATIGTSLAWAGAALNLDTGVFRSVGAMVLALLGVVLMSGNLQQRFAVA TSGVGDAGQSLISRLQPDGMWGQFIVGLVLGVVWSPCVGPTLGAAVVLASQGSHLLQV ALLMGIFGLGAALPVVTLSYVSRSATAKARGKLLQAGNTGKVAMGVIMIAIAGLILSG ADKDIEAWLVNHSPAWLSALTTRF" gene complement(69924..70310) /locus_tag="Rpic12D_3525" /db_xref="GeneID:8021212" CDS complement(69924..70310) /locus_tag="Rpic12D_3525" /inference="protein motif:PFAM:PF00085" /note="PFAM: Thioredoxin domain; KEGG: bbt:BBta_3389 putative thioredoxin (H-type,TRX-H)" /codon_start=1 /transl_table=11 /product="Thioredoxin domain protein" /protein_id="YP_002983458.1" /db_xref="GI:241665099" /db_xref="InterPro:IPR001220" /db_xref="InterPro:IPR006662" /db_xref="InterPro:IPR013766" /db_xref="InterPro:IPR017937" /db_xref="GeneID:8021212" /translation="MKILRTISGLALAVSASVAMAGEIKPYTPQAFDQLTHAGKPVIV DVSATWCPTCKAQRPIVENLMKQAAYLDVTVLAVDFDTNRAALKKFKVNMQSTLVAFK GTSEVGRSVGDTTPSGIEDLIRKTVH" sig_peptide complement(69924..69989) /locus_tag="Rpic12D_3525" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 1.000 at residue 22" gene 70494..70733 /locus_tag="Rpic12D_3526" /db_xref="GeneID:8021213" CDS 70494..70733 /locus_tag="Rpic12D_3526" /inference="ab initio prediction:Prodigal:1.4" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983459.1" /db_xref="GI:241665100" /db_xref="GeneID:8021213" /translation="MKTSLKVASLAALTAATLALPAAAQEMKGSAKCAPNTEMAKCGA AKCAGKCSPGKHMKKGKHGANKCAPKCAPKGAPQS" sig_peptide 70494..70568 /locus_tag="Rpic12D_3526" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.999 at residue 25" gene 70703..71431 /locus_tag="Rpic12D_3527" /db_xref="GeneID:8021214" CDS 70703..71431 /locus_tag="Rpic12D_3527" /inference="similar to AA sequence:KEGG:RC1_1434" /note="KEGG: rce:RC1_1434 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983460.1" /db_xref="GI:241665101" /db_xref="GeneID:8021214" /translation="MRSQRRSPKLTSVTRARRSTSPVGDAARVAGSRILDVYAGLAQR GQHLLGNLLHGQPPRQWAHYPEDDAIDANSGYQWFYHSHAPEDRSGAAEHGHIHVFAR RNVWSRRLYSKRELAFAELCGGTNPQVSTRHLLAIGFDAKGLPLSLFTVNSWVTGDLM LSAETTAELLDQMSLDTGNTDVDAVIVSLVRLFRTEILDLLTRRDEALFGFKGADVLS DESLEVLSERSIDVDSKLEQLCGP" gene complement(71744..72643) /locus_tag="Rpic12D_3528" /db_xref="GeneID:8021215" CDS complement(71744..72643) /locus_tag="Rpic12D_3528" /inference="protein motif:PFAM:PF03466" /note="PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rce:RC1_1937 transcriptional regulator, LysR family protein" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LysR family" /protein_id="YP_002983461.1" /db_xref="GI:241665102" /db_xref="InterPro:IPR000847" /db_xref="InterPro:IPR005119" /db_xref="GeneID:8021215" /translation="MSRLDEIMTFVEVVNAGSITKAAERMGIVKSAVSRRLNDLEDRL KARLLVRSTAGLSVTEAGRAFHERARRIIAELDEAELTVTDASADLSGTIHMSAPVSL TNLVLMPHICAFLRLHPGLTLDLSLSDRFVDIVNEGFDIAIRAGTLSDSRLVARKLTD MRRVTCASPDYLASRGTPLTPQDLDHHDGLVSTNAPESTYWHYTAPDGETYLARPNTR MKANNGEAVITAAVAGLGIAAVPAFISTELIAQGALIPVLSDYRLAAGSLYAIYPPGR HLSHRVRVLIDCLVERFAIRQPT" gene 72709..73275 /locus_tag="Rpic12D_3529" /db_xref="GeneID:8021216" CDS 72709..73275 /locus_tag="Rpic12D_3529" /inference="ab initio prediction:Prodigal:1.4" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983462.1" /db_xref="GI:241665103" /db_xref="GeneID:8021216" /translation="MMALIVSQAKVLAMNEIERFVSLFGQQVTLSLNVLEQIPEELWT AIPADSDTNYLGQRIKRINIEALVGHLMRAEDFWARTLSQIQPNEEMVPPVGVPMLDL ASTGMPLVNQYRHVLENNLNRIRAMSPQQLSTVFTFIGRTFTLQGFLWAIYAHHSYHF GQIDLLLRQQSYLPPEFLELPNRDQLIA" gene 73344..73542 /locus_tag="Rpic12D_3530" /pseudo /db_xref="GeneID:8021217" gene 73548..73979 /locus_tag="Rpic12D_3531" /db_xref="GeneID:8021218" CDS 73548..73979 /locus_tag="Rpic12D_3531" /inference="protein motif:PFAM:PF04234" /note="PFAM: copper resistance protein CopC; KEGG: bcj:BCAM0449 putative copper-resistance exported protein" /codon_start=1 /transl_table=11 /product="copper resistance protein CopC" /protein_id="YP_002983463.1" /db_xref="GI:241665104" /db_xref="InterPro:IPR007348" /db_xref="GeneID:8021218" /translation="MGRRDLLVSTRLPWTTYLTTNMNARIKTSLISLAAAMTIAPTIA LAHGKLESTEPAAGSTVSAVTSPLRMTFNEALEPAFSTAHVTDAKGSAVTTLKATVDP TNPRSLTVSVPKLAAGTYSVDWAVMTHDGHKTKGRYTFTVK" sig_peptide 73548..73688 /locus_tag="Rpic12D_3531" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.993 at residue 47" gene 73979..74923 /locus_tag="Rpic12D_3532" /db_xref="GeneID:8021219" CDS 73979..74923 /locus_tag="Rpic12D_3532" /inference="protein motif:PFAM:PF05425" /note="PFAM: copper resistance D domain protein; KEGG: bpl:BURPS1106A_A0625 putative copper resistance protein D" /codon_start=1 /transl_table=11 /product="copper resistance D domain protein" /protein_id="YP_002983464.1" /db_xref="GI:241665105" /db_xref="InterPro:IPR008457" /db_xref="GeneID:8021219" /translation="MNESALNVARFGLTALQNLGFAVLVGTLLSDGWLKRTSSAWQAD VTVRLAKTFRVAAIAVLAVSALYFWIHCAQMADAPLWEAWPAVLSMLQATEFGYAWAA SAVCIVTVVALSFAAWETQSHRLRALLWTALAGAALARSHGGHPIDAGAFSLPVWVDW VHLLAISAWVGLVYAAAFIVMPRCVGERPADRGNGASYVQALSNAATFALAALVATGA YNGWKNVGSPANLLGSTYGKLLLLKLAFVFTAAALGGHNRLFEMPGLLAALKQPSAAN TAGTGRRFIGVLRIEAVVLTAAILVAAVLTASALPGTE" gene 75135..77495 /locus_tag="Rpic12D_3533" /db_xref="GeneID:8021220" CDS 75135..77495 /locus_tag="Rpic12D_3533" /inference="protein motif:TFAM:TIGR01525" /note="KEGG: bvi:Bcep1808_3972 heavy metal translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; YHS domain protein; Haloacid dehalogenase domain protein hydrolase; SMART: TRASH domain protein" /codon_start=1 /transl_table=11 /product="heavy metal translocating P-type ATPase" /protein_id="YP_002983465.1" /db_xref="GI:241665106" /db_xref="InterPro:IPR001756" /db_xref="InterPro:IPR001757" /db_xref="InterPro:IPR005834" /db_xref="InterPro:IPR006403" /db_xref="InterPro:IPR006416" /db_xref="InterPro:IPR007029" /db_xref="InterPro:IPR008250" /db_xref="InterPro:IPR011017" /db_xref="GeneID:8021220" /translation="MEKHRPLHGVEHGHMHHDSHSHAVQTSGERAEIDPVCGMKVSAD AKFSVEHEGKTYRFCSEKCESTFVAQPQRYLSPIESAPVETQEGTVYTCPMHPQIRQD HPGNCPICGMTLEPVIPELSEDENPELADFQRRFWWTLPLTAVVFILAMFGHRYGWMA PSVQSWVELVLATPVVVWAGHPFFKRCIQSFIHRSPNMWTLIGLGTGAAYIYSVVATV APGVFPETFAAHGRIGVYFEAAAVIISLTLVGQVLELRARSQTSAAIKSLLGLAPKTA RRLNADGSEEDVPLSRVHVGDRLRVRPGEKVPVDGVVIEGTSSLDESMITGEPIPITK RVGDHVIGATMNAAGSLVIESEKVGSQTVLSQIVQMVAQAQRSKAPMQRMADKVAGVF VVAVVAIAVLTFFAWGVFGPQPSWVYGLINAVAVLIIACPCALGLATPMSIMVASGKG ATTGVLFRDAAAIENLRKVDTLIVDKTGTLTEGKPAFERSIGTNGFSDIEVLRLAASL DQGSEHPLAAAIVEAARQQNLTLDKAEHFESSTGIGVRGTVAGRKLALGNTALMEAAG TSVAAIRQAGDALRAHGASVIYLAVDGALAGLLAVSDPVKATTAEALKDLKEKGIRVV MATGDGVLTARAVAEKLGIAEFHGEVKPADKLALVSKFQREGRVVAMAGDGINDAPAL AKADVGIAMGTGTDVAMNSAQVTLVKGDLRGISRARRLSEATIANMKQNLGFAFVYNA LGVPLAAGVLYSATGLLLSPMIAALAMSLSSISVVSNALRLRRIDI" gene complement(77850..78710) /gene="dsbG" /locus_tag="Rpic12D_3534" /db_xref="GeneID:8021221" CDS complement(77850..78710) /gene="dsbG" /locus_tag="Rpic12D_3534" /inference="similar to AA sequence:KEGG:BB2320" /note="KEGG: bbr:BB2320 disulfide isomerase/thiol-disulfide oxidase" /codon_start=1 /transl_table=11 /product="disulfide isomerase/thiol-disulfide oxidase" /protein_id="YP_002983466.1" /db_xref="GI:241665107" /db_xref="GeneID:8021221" /translation="MQPNVHPPSAMNHSRKTFSLGPVSWLTAVALSTASVAAYSQEKP AALQALEKKGVTIVGKMAAPTGLTAYAGFMEEQPVALYVTPDGKHVIAGTVFDASGND LTRAPLEEAVRKPMSERAWAELAHATWIADGRDSAPRKVYVFTDPNCPYCNKFWADAR PWVDSGKVQLRHIMVGILTPTSAGKAAALLADKNPAAALNAYEQSHVSLNAKVLSSGH PKPLDDAGLKPVATIPAAVKGKLDANERLMASLGFQATPAILWRDSDGALRMKQGVPA SSLSEVLGPR" sig_peptide complement(77850..77972) /gene="dsbG" /locus_tag="Rpic12D_3534" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.993) with cleavage site probability 0.643 at residue 41" gene 79314..79889 /locus_tag="Rpic12D_3535" /db_xref="GeneID:8021222" CDS 79314..79889 /locus_tag="Rpic12D_3535" /inference="protein motif:PFAM:PF00440" /note="PFAM: regulatory protein TetR; KEGG: pfo:Pfl01_2955 TetR family transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, TetR family" /protein_id="YP_002983467.1" /db_xref="GI:241665108" /db_xref="InterPro:IPR001647" /db_xref="GeneID:8021222" /translation="MAARPVQFEREDALQLALQTFWRHGYEATPVAALADTMGLSKSS LYNSFGSKRDLLLEVIAKYAEARSAAIRRASESPGRLERLQELLVAGTADNDDGQGCL LVNMATELAAHDDDVRQSVRAGFFTMAQAFGQLLIAGKQAGEFDERLDATKTAQRLLN TAVGLCVLTKAGFSALELSPVIEHLLADLRA" gene 80217..81980 /locus_tag="Rpic12D_3536" /db_xref="GeneID:8021223" CDS 80217..81980 /locus_tag="Rpic12D_3536" /inference="protein motif:PFAM:PF00563" /note="PFAM: EAL domain protein; GGDEF domain containing protein; CBS domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; KEGG: bpy:Bphyt_0426 diguanylate cyclase/phosphodiesterase" /codon_start=1 /transl_table=11 /product="diguanylate cyclase/phosphodiesterase" /protein_id="YP_002983468.1" /db_xref="GI:241665109" /db_xref="InterPro:IPR000160" /db_xref="InterPro:IPR000644" /db_xref="InterPro:IPR001633" /db_xref="GeneID:8021223" /translation="MSIADCMENGLLHTVFQPIANLPSGELLGYEALIRGPAGSPLER PQALFEQAQREHCVIQLERFAARLSIETFGQLKLPGKLFLNLSADAIREIDHCEDDVR AFMSRQQFAFSRIVIELTEQASPMPLDSLEASLRRIREAGAQLALDDYGTGNANLSLW IALQPDYVKIDRSIVDGAARSAFRLEALRYLKGLATASHALLIAEGLENLDDLRVCRD IGIECAQGFVFGRPSTAPGHSVQGPALEAIKANVIAVFPETVKVPQRAFSASRLLIKA PSVSPSALNNDVLDVFTRHPALHAVAVVEQGRTVGLINRHTFVDAYAHPYHRELYGRK SCMEFANTSPVVVERSATMEALANVLTAQDQRYLTQGLVIVEQGQYVGLATGEALVRA VTEIRIEAARYANPLTFLPGNIPIDAHIKRLLASQVPFHACYCDLNSFKPFNDQYGYW HGDEMLKLAAATLTQACAPQKDFLGHVGGDDFLILFQSDDWERRIREAMTQFDARAVQ LYTPADIAAGGIRSEDRHGDLRFYGFVSIAVGVVPIQAGAAVDGDTIATLAAAAKREA KRSAENFFIWRDDALDPARNA" gene 82256..83680 /locus_tag="Rpic12D_3537" /db_xref="GeneID:8021224" CDS 82256..83680 /locus_tag="Rpic12D_3537" /EC_number="3.1.4.3" /inference="protein motif:PRIAM:3.1.4.3" /note="PFAM: phosphoesterase; KEGG: bpy:Bphyt_5961 phosphoesterase" /codon_start=1 /transl_table=11 /product="Phospholipase C" /protein_id="YP_002983469.1" /db_xref="GI:241665110" /db_xref="InterPro:IPR007312" /db_xref="GeneID:8021224" /translation="MTQKTSTARFRTRRRLLGAAAATLAGAGLSACGGGGDGSVAGDP SSSSAVGNPPAPAQLVPPILPTPAQSGIDHVVLVVMENRSFDHYLGWLPGADGKQAGL QFIDAFGNLQNSFRLATDPKYGFQGCGFADPDHSYEGARTQLDGGKMDGWLLTADTNK TPGDLFPIGYYQAEDLSFFGSAARDWTVCDSYHCGILAETYPNRFYLMCGETDRLHNS NATCSLPTIFDRFAEKGVSANYYFSDVPFTALFGTKYLNTSKPFATFLTDAAAGTLPA FSYVDPRFTGENPQGISADDHPNSDIRNGQVFLNQIYDAVRNGPGWQKTLLIITYDEW GGFFDHVPPFKRPVSAAETQLGNDGYLGFRVPMVLIGPRVKRGHVSHWPLDPSSIHQL LTWRFGLNALGARGGLPDTNSIAYALDFVAQPNLAAPAYPVPQGPFGGVCSGSITGSV PGISGVPGISSLRTIATSLGFPLP" sig_peptide 82256..82357 /locus_tag="Rpic12D_3537" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.675 at residue 34" gene 83684..84898 /locus_tag="Rpic12D_3538" /db_xref="GeneID:8021225" CDS 83684..84898 /locus_tag="Rpic12D_3538" /inference="protein motif:PFAM:PF04185" /note="PFAM: phosphoesterase; KEGG: nca:Noca_3200 phosphoesterase" /codon_start=1 /transl_table=11 /product="phosphoesterase" /protein_id="YP_002983470.1" /db_xref="GI:241665111" /db_xref="InterPro:IPR007312" /db_xref="GeneID:8021225" /translation="MAIMRISKLNWLTSGFLAAFLACLLTGCGGASDATNATGGSSAA VSPAPASPPAQAPVTPTASRIGHVFVIVLENKGYTQTFGSGSQAPYLANTLASQGALL TQYYGTGHNSNDNYLTMISGQAPNAQTQADCQYYTDWLGTMSPDANGQVTGTGCVYPA AIGTIASQLDAKGLAWRGYMEDMGNDLTRDGRPTCSHPALNGKDGTQSATATDGYATR HNPFMYFHSVIDNQSYCDSHVVRLDSLATDLNSVATTPAFSFIVPNLCNDGHDEPTCA DGKSAGGLPAVNRFLQAWVPQIINSPAFQSDGLLIITFDEADTNDTSACCGEPTGPNS VAPGLTGPGGGRVGAVVLSPFVKPGTISNTPYNHYALLKSIEDVFGVSHLGYAGMSGL QGFGSDVYTAAP" sig_peptide 83684..83788 /locus_tag="Rpic12D_3538" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.522 at residue 35" gene 85053..86279 /locus_tag="Rpic12D_3539" /db_xref="GeneID:8021226" CDS 85053..86279 /locus_tag="Rpic12D_3539" /inference="protein motif:TFAM:TIGR00937" /note="TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: bxe:Bxe_B0092 chromate transporter" /codon_start=1 /transl_table=11 /product="chromate transporter, chromate ion transporter (CHR) family" /protein_id="YP_002983471.1" /db_xref="GI:241665112" /db_xref="InterPro:IPR003370" /db_xref="InterPro:IPR014047" /db_xref="GeneID:8021226" /translation="MDNSLHSPRLRHASSPLAVLAVFLKLGLTSFGGPVAHIGYFRRE FVERRRWLDDAAFTDLVGLCQFLPGPASSQVGFSIGLLRAGWLGGFAAWCGFTLPSVL LLIAFAAISPALGGPLGAGLVHGLKLVAVGIVAQAVWDMARKLCPDLRRAGIALAVVV LLGLLSSAYAQLIAIALGAILGLVLCRGVVLPGTPGANAHHGQFQVSRYAGVIALALF CGLLFGLPFLSHAGPGAAIRVFDAFYRSGALVFGGGHVVLPLLQAQTVATGWISSNDF LSGYGAAQAVPGPLFTFAAFLGWLTPGMPSHWAGAALATVGIFLPGLLLVVAALPYWQ ALRTRRSMVALLAGVNAAVVGVLASALYSPVWTSAVKGQLDFAIAAVAFFLLVRWKLP PIVVVALCAIAGVACA" gene complement(86542..86733) /locus_tag="Rpic12D_3540" /db_xref="GeneID:8021227" CDS complement(86542..86733) /locus_tag="Rpic12D_3540" /inference="protein motif:TFAM:TIGR00013" /note="TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-oxalocrotonate tautomerase; KEGG: reu:Reut_B5693 4-oxalocrotonate tautomerase" /codon_start=1 /transl_table=11 /product="4-oxalocrotonate tautomerase family enzyme" /protein_id="YP_002983472.1" /db_xref="GI:241665113" /db_xref="InterPro:IPR004370" /db_xref="GeneID:8021227" /translation="MPFAQIYMIEGRTVEQRRAVIEKVTAALVEATGAPKENVRVWIH DVPKENWGIAGVSAKDLGR" gene complement(86778..87824) /locus_tag="Rpic12D_3541" /db_xref="GeneID:8021228" CDS complement(86778..87824) /locus_tag="Rpic12D_3541" /inference="protein motif:TFAM:TIGR03217" /note="TIGRFAM: 4-hydroxy-2-oxovalerate aldolase; PFAM: pyruvate carboxyltransferase; DmpG communication domain protein; KEGG: rme:Rmet_1319 4-hydroxy-2-ketovalerate aldolase" /codon_start=1 /transl_table=11 /product="4-hydroxy-2-oxovalerate aldolase" /protein_id="YP_002983473.1" /db_xref="GI:241665114" /db_xref="InterPro:IPR000891" /db_xref="InterPro:IPR012425" /db_xref="InterPro:IPR017629" /db_xref="GeneID:8021228" /translation="MTTLQGKSITVHDMTLRDGMHPKRHLMTLDQMRTIAQGLDAAGV PLIEVTHGDGLGGSSLNYGFPAHSDEEYLGAVIPLMKQAKVSALLLPGIGTVDHLKMA RELGVHTIRVATHCTEADVSEQHISYARKLDMDTVGFLMMAHMNSPEGLVKQAKLMES YGANCIYITDSAGYMLPDDVKVRLSAVREALKPETELGFHGHHNLAMGIANSIAAIEC GATRIDAAAAGLGAGAGNTPMEVLVAVCDRMGIRTGVDVWKIQDVAEDLVVPIMDFPI RIDRDALTLGYAGVYGSFLLFAKRAEKKYGVPARDLLVELGRRGMVGGQEDMIEDTAL TMARQRGLLPEQAA" gene complement(87838..88773) /locus_tag="Rpic12D_3542" /db_xref="GeneID:8021229" CDS complement(87838..88773) /locus_tag="Rpic12D_3542" /inference="protein motif:TFAM:TIGR03215" /note="TIGRFAM: acetaldehyde dehydrogenase (acetylating); PFAM: Acetaldehyde dehydrogenase ; Semialdehyde dehydrogenase NAD - binding; KEGG: lch:Lcho_3341 acetaldehyde dehydrogenase (acetylating)" /codon_start=1 /transl_table=11 /product="acetaldehyde dehydrogenase (acetylating)" /protein_id="YP_002983474.1" /db_xref="GI:241665115" /db_xref="InterPro:IPR000534" /db_xref="InterPro:IPR003361" /db_xref="InterPro:IPR015426" /db_xref="GeneID:8021229" /translation="MTQKIKCALIGPGNIGTDLLAKLQRSPVLEPVWMVGIDPESDGL RRAREMGIKTTAEGVDGLLPHVLADGVQIAFDATSAYVHAENSRKLNALGVLMIDLTP AAIGPYCVPPVNLKEHLGRAEMNVNMVTCGGQATIPMVAAVSRVQPVAYGEIVATVSS RSVGPGTRKNIDEFTRTTAGAVERVGGAKKGKAIIVINPAEPPLIMRDTVHCLTETEP DQAAITASIQAMIKEVQKYVPGYKLVNGPVFDGNRVSVFLEVEGLGDYLPKYAGNLDI MTAAAARTAEMFAEEMIKGELNLRAGTAASATETA" gene complement(88811..89602) /locus_tag="Rpic12D_3543" /db_xref="GeneID:8021230" CDS complement(88811..89602) /locus_tag="Rpic12D_3543" /EC_number="4.1.1.77" /inference="protein motif:TFAM:TIGR03218" /note="KEGG: reu:Reut_B5692 4-oxalocrotonate decarboxylase; TIGRFAM: 4-oxalocrotonate decarboxylase; PFAM: fumarylacetoacetate (FAA) hydrolase" /codon_start=1 /transl_table=11 /product="4-oxalocrotonate decarboxylase" /protein_id="YP_002983475.1" /db_xref="GI:241665116" /db_xref="InterPro:IPR002529" /db_xref="InterPro:IPR017630" /db_xref="GeneID:8021230" /translation="MALNRQTIEALAAHVESAQLDVRDITKITDEYPDMDWADAYDIQ DEIRRRKEARGLKTVGLKAGLTSFAKMKQMGVETPVFGFVSEDMARAEGSEIRMSELI HPKVEAEICIVTKAPLRGPGCHVGNVLAAIDFVIPAVEIIDSRYRDFKFDLKSVIADN TSAARFVVGGRSRNLEELDLRTLGVVLEKNGRAVAMAAGAAVLGHPAAAVAMMANHLG ARGQEIPAGTFIMTGGVTEAIAVAEGDSVCVRFQDLGNVSMRFVN" gene complement(89632..90414) /locus_tag="Rpic12D_3544" /db_xref="GeneID:8021231" CDS complement(89632..90414) /locus_tag="Rpic12D_3544" /EC_number="4.1.1.77" /inference="protein motif:TFAM:TIGR03220" /note="KEGG: reu:Reut_B5691 4-oxalocrotonate decarboxylase; TIGRFAM: 2-oxopent-4-enoate hydratase; PFAM: fumarylacetoacetate (FAA) hydrolase" /codon_start=1 /transl_table=11 /product="2-oxopent-4-enoate hydratase" /protein_id="YP_002983476.1" /db_xref="GI:241665117" /db_xref="InterPro:IPR002529" /db_xref="InterPro:IPR017632" /db_xref="GeneID:8021231" /translation="MDALKIQHYGDALYESLRSRTPVEPLTDREPGITIDDAYQIQLR MIGRRIEAGETVIGKKIGVTSQVVMDMLGVNQPDFGHLLSGMVFNEGEAVDTSKMIAP KAEAEVAFVLSRDLCGPGVTAADVLRATDCVMPCFEIVDSRIRDWKIKIQDTVADNAS CGVFTLGGTRRSPRDLDLALAGMVLEKNGEIVSTSCGASVQGSPVNAVAWLANTLGRL GIALKAGDVILSGSQSPLVPVKAGDSLHCSVGGLGGTSVRFI" gene complement(90440..91291) /locus_tag="Rpic12D_3545" /db_xref="GeneID:8021232" CDS complement(90440..91291) /locus_tag="Rpic12D_3545" /inference="protein motif:PFAM:PF00561" /note="PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: reu:Reut_B5690 alpha/beta hydrolase fold" /codon_start=1 /transl_table=11 /product="alpha/beta hydrolase fold protein" /protein_id="YP_002983477.1" /db_xref="GI:241665118" /db_xref="InterPro:IPR000073" /db_xref="InterPro:IPR003089" /db_xref="InterPro:IPR012908" /db_xref="GeneID:8021232" /translation="MSTINLEGADARYVRTGAVQTYVHDIGQGAPVLLIHGSGPGVSA WANWRPVMPALARQRRVIAPDMLGFGQSDRPAGQTYNMDVWVQQAIDLLDALDLPQVD LVGNSFGGGLAIALAIRAPERVRRLVLMGAVGVPFAITPALDAVWGYTPSLQAMRGLL DVFAYDRGRVTDELAQLRYEATIVPGVQESYAAMFPAPRQRWVDAMASAEADIRALPH ETLVLHGREDQVIPVSNSFTLADWIPNSQLHVFGHCGHWTQIEHSARFAQLVNNFLAE ADAGAVA" gene complement(91288..92742) /locus_tag="Rpic12D_3546" /db_xref="GeneID:8021233" CDS complement(91288..92742) /locus_tag="Rpic12D_3546" /inference="protein motif:TFAM:TIGR03216" /note="TIGRFAM: 2-hydroxymuconic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: reu:Reut_B5689 betaine-aldehyde dehydrogenase" /codon_start=1 /transl_table=11 /product="2-hydroxymuconic semialdehyde dehydrogenase" /protein_id="YP_002983478.1" /db_xref="GI:241665119" /db_xref="InterPro:IPR015590" /db_xref="InterPro:IPR016160" /db_xref="InterPro:IPR017628" /db_xref="GeneID:8021233" /translation="MKQFLNFINGEFVATHKTFENRAPVDNRVIGLVHEAGQAEVDAA VAAARAALHGDWGRMTVVKRVELLHAVADEINRRFDDFLEAELADTGKPRSLAAHIDI PRGAANFKVFADIVKNVPTESFEMATPDGGTAVSYALRSPLGVVAVVCPWNLPLLLMT WKVGPALACGNTVIVKPSEETPATATLLGEVMAHVGIPKGVYNVVHGFGPGSAGEFLT RHPGVNGITFTGETRTGEAIMAAAAKGVRPVSFELGGKNAGIVFADADFDKAVAGITR SAFENCGQVCLGTERVYVQRPIFDKFVQALKEKAEALKIGPSGEPGVGLGPLISAEHK AKVMSYYELARAEGATVVTGGGAPDMPAALAEGHWVQPTIWTGLPESARVIREEIFGP CCHIAPFDTEEEAIALANATDYGLATTVWTQNLGTAHRMARAVEVGLCWINSWFLRDL RTAFGGAKASGIGREGGVHSLEFYTELRNVMVKL" gene complement(92792..93244) /locus_tag="Rpic12D_3547" /db_xref="GeneID:8021234" CDS complement(92792..93244) /locus_tag="Rpic12D_3547" /inference="protein motif:PFAM:PF03928" /note="PFAM: protein of unknown function DUF336; KEGG: reu:Reut_B5688 hypothetical protein" /codon_start=1 /transl_table=11 /product="protein of unknown function DUF336" /protein_id="YP_002983479.1" /db_xref="GI:241665120" /db_xref="InterPro:IPR005624" /db_xref="GeneID:8021234" /translation="MSTRTAHDATFLSEARSQITLPAAQAAVAAAVESAQAQGLRINV AVVDGGGALVAFARMSGAFLHSIDIAIDKAYTAASFGFPTAQWGALLAGDDMLRIGLA ERPRLVMFGGGLPIIAAGERIGGIGVSGGSAEQDEACARAGLHAIGLS" gene complement(93303..94247) /locus_tag="Rpic12D_3548" /db_xref="GeneID:8021235" CDS complement(93303..94247) /locus_tag="Rpic12D_3548" /inference="protein motif:TFAM:TIGR03211" /note="TIGRFAM: catechol 2,3 dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: reu:Reut_B5687 catechol 2,3-dioxygenase" /codon_start=1 /transl_table=11 /product="catechol 2,3 dioxygenase" /protein_id="YP_002983480.1" /db_xref="GI:241665121" /db_xref="InterPro:IPR000486" /db_xref="InterPro:IPR004360" /db_xref="InterPro:IPR017624" /db_xref="GeneID:8021235" /translation="MGVLRIGHASLKVMDMAAAVRHYENVLGMKVTMQDNAGNVYFKC WDEWDKYSLILTPSDQAGLNHLAYKVEKDADLDELQAKIEAWGLKTVMLPEGSLPATG RMLQFNLPSGHEMRLYAMKEVVGTEVGSRNPDPWPDNLKGAGVHWLDHALLMCELNPE AGVNTVADNTRFMQEVLGFFLTEQVVVGPDGCVQAAAWLARSTTPHDIAFVGGPRSGL HHIAFFLDSWHDVLKAADVMAKNQTKIDVAPTRHGITRGETIYFFDPSGNRNETFAGL GYLAQPDRPVTTWSEDKLWTGIFYHTGEAVPSFTDVYT" gene complement(94271..94636) /locus_tag="Rpic12D_3549" /db_xref="GeneID:8021236" CDS complement(94271..94636) /locus_tag="Rpic12D_3549" /inference="protein motif:PFAM:PF00111" /note="PFAM: ferredoxin; KEGG: reu:Reut_B5686 ferredoxin" /codon_start=1 /transl_table=11 /product="ferredoxin" /protein_id="YP_002983481.1" /db_xref="GI:241665122" /db_xref="InterPro:IPR001041" /db_xref="InterPro:IPR006058" /db_xref="GeneID:8021236" /translation="MLDTRPKVDVCVEQTQEHYACATTESLLTGMLRLGRKGIPVGCV NGGCGVCKVRVLDGSTARLGPLSRAHVSADEEAQGVTLACREAPLTAVRLAVLGKFEK PFSRGFAASAGAQSDTKPQ" gene complement(94652..95716) /locus_tag="Rpic12D_3550" /db_xref="GeneID:8021237" CDS complement(94652..95716) /locus_tag="Rpic12D_3550" /inference="protein motif:PFAM:PF00970" /note="PFAM: Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; ferredoxin; KEGG: reu:Reut_B5685 ferredoxin:oxidoreductase FAD/NAD(P)-binding:oxidoreductase FAD-binding region" /codon_start=1 /transl_table=11 /product="Oxidoreductase FAD-binding domain protein" /protein_id="YP_002983482.1" /db_xref="GI:241665123" /db_xref="InterPro:IPR001041" /db_xref="InterPro:IPR001221" /db_xref="InterPro:IPR001433" /db_xref="InterPro:IPR001834" /db_xref="InterPro:IPR006058" /db_xref="InterPro:IPR008333" /db_xref="GeneID:8021237" /translation="MCNQLTIEPLGATLDVAEGQTLLDAALRSGVYIPHACGHGLCGT CKVQVTSGEVDHGAANPFALMDIEREEGKTLACCATALSDVCIEADVDDEPDARVIPV RDFVGTVTRIDTLTPTIKGLRLKLDQPIDFQAGQYVMVEIPGLGQRRAFSIANAPSEV DRCGEIELQVRRVPGGAGTGVLHEQLAVGDTLHVTGPYGRFFVRQSAAKPMLFVAGGS GLSSPRSMILDLLEQGCTLPITLVNGQRSREELYGHAEFVALADRHPNFSYVPVLSNE PEGSAWDGARGFAHDAAKAHFNGQFAGHKAYLCGPPPMVEAAIGALMQGRLFEDDIYT EKFLSAADANAQRSPLFKRV" gene complement(95720..96085) /locus_tag="Rpic12D_3551" /db_xref="GeneID:8021238" CDS complement(95720..96085) /locus_tag="Rpic12D_3551" /inference="protein motif:PFAM:PF04663" /note="PFAM: Phenol hydroxylase conserved region; KEGG: reu:Reut_B5684 phenol hydroxylase region" /codon_start=1 /transl_table=11 /product="Phenol hydroxylase conserved region" /protein_id="YP_002983483.1" /db_xref="GI:241665124" /db_xref="InterPro:IPR006756" /db_xref="GeneID:8021238" /translation="MSVVTNPKAAPYKFPMKDVRENFPAPLLYIGWEDHLMFCAPVCL PLPPDMPFGALMTQVLPGIYAEHPDFERIDWSAAQWFKSGQPWTPDAAKSLAENDLGH KDVIRFRTPGLTGIKGSCS" gene complement(96082..97626) /locus_tag="Rpic12D_3552" /db_xref="GeneID:8021239" CDS complement(96082..97626) /locus_tag="Rpic12D_3552" /inference="protein motif:PFAM:PF02332" /note="PFAM: methane/phenol/toluene hydroxylase; YHS domain protein; KEGG: reu:Reut_B5683 methane/phenol/toluene hydroxylase:YHS" /codon_start=1 /transl_table=11 /product="methane/phenol/toluene hydroxylase" /protein_id="YP_002983484.1" /db_xref="GI:241665125" /db_xref="InterPro:IPR003430" /db_xref="InterPro:IPR007029" /db_xref="GeneID:8021239" /translation="MDTRVAKKKLGLKERYAAMTRGLGWETTYQPMDKVFPYDTYEGI KIHDWDKWQDPFRLTMDAYWKYQGEKEKKLYAVIEAFAQNNGQLGISDARYVNALKLF IQGVTPLEYNAHRGFAHVGRQFTGEGARVAAQMQSIDELRHYQTETHAISHYNKYFNG MHSPNHWFDRVWYLSVPKSFFEDACTAGPFEFLTAVSFSFEYVLTNLLFVPFMSGAAH NGDMSTVTFGFSAQSDESRHMTLGIECIKFMLEQDPDNVPIVQRWIDKWFWRGYRLLT IVAMMQDYMLPKRVMSWKEAWEMYAEGNGGALFKDLARYGIREPAGWKDACEGKDHIS HQAWATFYNYGAAAPFHTWVPSDEEMQWLSEKYPDSFDTLYRPRFEFWRERAEEGRRF YNKTLPMLCTTCQVPMFFTEPGDATKIAYRESDYFGNKYHFCSDHCKHIFDDEPEKYV QSWLPVHQIYQGHCFPEGTDPTAEGFDPLMAVLKYYEMNIGRDNFDFEGSEDQKNFAA WTGESA" gene complement(97672..97941) /locus_tag="Rpic12D_3553" /db_xref="GeneID:8021240" CDS complement(97672..97941) /locus_tag="Rpic12D_3553" /inference="protein motif:PFAM:PF02406" /note="PFAM: monooxygenase component MmoB/DmpM; KEGG: reu:Reut_B5682 monooxygenase component MmoB/DmpM" /codon_start=1 /transl_table=11 /product="monooxygenase component MmoB/DmpM" /protein_id="YP_002983485.1" /db_xref="GI:241665126" /db_xref="InterPro:IPR003454" /db_xref="GeneID:8021240" /translation="MSQVFIAFQANEESRPVIEAIVTDNPEAVVTYPTGLVKIDAPGR LTIRRETIEEQTGRPFDLQQLHVNLVTLSGHIDEDDDQLTLSWQH" gene complement(97977..98984) /locus_tag="Rpic12D_3554" /db_xref="GeneID:8021241" CDS complement(97977..98984) /locus_tag="Rpic12D_3554" /EC_number="1.14.13.7" /inference="protein motif:PRIAM:1.14.13.7" /note="PFAM: methane/phenol/toluene hydroxylase; KEGG: reu:Reut_B5681 methane/phenol/toluene hydroxylase" /codon_start=1 /transl_table=11 /product="Phenol 2-monooxygenase" /protein_id="YP_002983486.1" /db_xref="GI:241665127" /db_xref="InterPro:IPR003430" /db_xref="GeneID:8021241" /translation="MNIDLQAREITPLRQTFAHVARLIGEGKAATRYQEATYGAQSMA NFHYRPTWDPAHELYDAGRSRIRLADWQALKDPRQFYYATWTMTRARQQEAVEANFQF VESRGLASAMGDALRDRALQVLLPLRHVAWGANMNNASICAYGYGTAFTAPAMFHAMD DLGIAQLITRLALTLDEPAVLEAGKLAWLEDPRWQGLRRYVEDSFVVQDPVELFVAQN LALDGLLYPLIYGHFVDDHLALQGGTAVAILTSFMPEWHDETARWIDAVIKTMANAAE PEAAGNRALLSQWFSQWADRAQAALAPVAEMALGEHGAAALGEVRAALDARATKLGLS L" gene complement(99040..99249) /locus_tag="Rpic12D_3555" /db_xref="GeneID:8021242" CDS complement(99040..99249) /locus_tag="Rpic12D_3555" /inference="protein motif:PFAM:PF06099" /note="PFAM: Phenol hydroxylase subunit; KEGG: reu:Reut_B5680 phenol hydroxylase subunit" /codon_start=1 /transl_table=11 /product="Phenol hydroxylase subunit" /protein_id="YP_002983487.1" /db_xref="GI:241665128" /db_xref="InterPro:IPR010353" /db_xref="GeneID:8021242" /translation="MTIQLSQPSNEMPVVDLTRKYVSRIERRTDGLVSFEFAIGWPEL SVDLLLPEPAFTAFCERHQVTRLGS" gene 99964..101469 /locus_tag="Rpic12D_3556" /db_xref="GeneID:8021243" CDS 99964..101469 /locus_tag="Rpic12D_3556" /inference="protein motif:PFAM:PF02332" /note="PFAM: methane/phenol/toluene hydroxylase; YHS domain protein; KEGG: reu:Reut_B5679 methane/phenol/toluene hydroxylase:YHS" /codon_start=1 /transl_table=11 /product="methane/phenol/toluene hydroxylase" /protein_id="YP_002983488.1" /db_xref="GI:241665129" /db_xref="InterPro:IPR003430" /db_xref="InterPro:IPR007029" /db_xref="GeneID:8021243" /translation="MALLERAAWYDIARTTNWTPSYVTESELFPDIMTGAQGVPMETW ETYDEPYKTSYPEYVSIQREKDAGAYSVKAALERSRMFEDADPGWLSILKAHYGAIAL GEYAAMSAEARMARFGRAPGMRNMATFGMLDENRHGQLQLYFPHDYCAKDRQFDWAHK AYHTNEWGAIAARSTFDDLFMSRSAIDIAIMLTFAFETGFTNMQFLGLAADAAEAGDF TFASLISSIQTDESRHAQIGGPALQILIASGRKEQAQKLVDIAIARAWRLFSLLTGTS MDYATPLHHRKESFKEFMTEWIVGQFERTLIDLGLDLPWYWDQMINEFDYQHHAYQMG IWFWRPTIWWNPAAGITPDCRDWLEEKYPGWNDTFGKAWDVIIDNLLAGKPELTVPET LPIVCNMSQLPICAVPGNGWNVKDYPLDYKGRTYHFNSEIDRWVFQQDPLRYRDHLTL VDRFLAGQIQPPNLMGALQYMNLAPGECGDDAHHYAWVEAYRNQRYQKKAA" gene 101494..101754 /locus_tag="Rpic12D_3557" /db_xref="GeneID:8021244" CDS 101494..101754 /locus_tag="Rpic12D_3557" /inference="protein motif:PFAM:PF06234" /note="PFAM: Toluene-4-monooxygenase system B; KEGG: reu:Reut_B5678 toluene-4-monooxygenase system B" /codon_start=1 /transl_table=11 /product="Toluene-4-monooxygenase system B" /protein_id="YP_002983489.1" /db_xref="GI:241665130" /db_xref="InterPro:IPR009355" /db_xref="GeneID:8021244" /translation="MALFPVISNFQYDFVLQLVAVDTENTIDEVAAAAAHHSVGRRVA PQPGKVVRVRRQGGEQFYPRGAKLADTDIKPMEALEFIFCDA" gene 101762..102097 /locus_tag="Rpic12D_3558" /db_xref="GeneID:8021245" CDS 101762..102097 /locus_tag="Rpic12D_3558" /inference="protein motif:PFAM:PF00355" /note="PFAM: Rieske [2Fe-2S] domain protein; KEGG: reu:Reut_B5677 Rieske (2Fe-2S) region" /codon_start=1 /transl_table=11 /product="Rieske (2Fe-2S) domain protein" /protein_id="YP_002983490.1" /db_xref="GI:241665131" /db_xref="InterPro:IPR005806" /db_xref="GeneID:8021245" /translation="MNFQKVCSLDELWEGDMTEVEVAGHVIVLVRPEGGEPRAFQGIC PHQDIPLAEGKFDGRVLMCRAHQWTFDANTGKGINPGGCRLAEYALKVEGDDILVAVE GVEPLFANC" gene 102117..102431 /locus_tag="Rpic12D_3559" /db_xref="GeneID:8021246" CDS 102117..102431 /locus_tag="Rpic12D_3559" /inference="protein motif:PFAM:PF02406" /note="PFAM: monooxygenase component MmoB/DmpM; KEGG: reu:Reut_B5676 monooxygenase component MmoB/DmpM" /codon_start=1 /transl_table=11 /product="monooxygenase component MmoB/DmpM" /protein_id="YP_002983491.1" /db_xref="GI:241665132" /db_xref="InterPro:IPR003454" /db_xref="GeneID:8021246" /translation="MSIDNTAEAYRNNRVGPVLRASSITAGVIEAAQEDNPGKSIRID DKLAYVRIDTDGELILRRATLEEALGRPFKMSELEVNLSSFAGRIETTDDYVRFYYEK TL" gene 102444..103433 /locus_tag="Rpic12D_3560" /db_xref="GeneID:8021247" CDS 102444..103433 /locus_tag="Rpic12D_3560" /inference="protein motif:PFAM:PF02332" /note="PFAM: methane/phenol/toluene hydroxylase; KEGG: reu:Reut_B5675 methane/phenol/toluene hydroxylase" /codon_start=1 /transl_table=11 /product="methane/phenol/toluene hydroxylase" /protein_id="YP_002983492.1" /db_xref="GI:241665133" /db_xref="InterPro:IPR003430" /db_xref="GeneID:8021247" /translation="MTTQAEVLKPLKTWSHLAARRRKPSEYEIVSTNLHYTTDNPDAP FELDPNFEMAQWFKRNRNASPLTHPDWNAFRDPDELVYRTYNMLQDGQETYVFGLLDQ FSERGHDAMLERTWAGTLARLYTPARYLFHTLQMGSAYLTQLAPASTISNCAAYQTAD SLRWLTHTAYRTKELSQTFSDLGFGTDERRYWEQDPAWQGWRKLVEHALVAWDWAECF VALSLVVRPAVEEAVLRSLGEAARHNGDTLLGLLTDAQLADAQRHRRWAGALVRMALE QPGNREVITGWLAKWEPLADEAIVAYCAALPDAPAAQARATAAVREFRHSLGL" gene 103471..104502 /locus_tag="Rpic12D_3561" /db_xref="GeneID:8021248" CDS 103471..104502 /locus_tag="Rpic12D_3561" /inference="protein motif:PFAM:PF00970" /note="PFAM: Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; ferredoxin; KEGG: reu:Reut_B5674 ferredoxin:oxidoreductase FAD/NAD(P)-binding:oxidoreductase FAD-binding region" /codon_start=1 /transl_table=11 /product="Oxidoreductase FAD-binding domain protein" /protein_id="YP_002983493.1" /db_xref="GI:241665134" /db_xref="InterPro:IPR001041" /db_xref="InterPro:IPR001221" /db_xref="InterPro:IPR001433" /db_xref="InterPro:IPR001709" /db_xref="InterPro:IPR001834" /db_xref="InterPro:IPR006058" /db_xref="InterPro:IPR008333" /db_xref="GeneID:8021248" /translation="MANDTLEPAMKHQITIEGGSAFSVAADEDTLLRGALRAGIALPH ECSVGGCGACRFDLLSGLVESIWPEAPGLSERDRKRGKHLACQSRPLGDCTIRVRCDD TYRPVVSPGRWPAVLQARRELTPDMSEFTFAVHAPAEFRPGQYALLYPPHAPGARAYS MSNLPNADGIWQFVIRRVPGGAGSNALFDQVEIGQTVTLDGPYGHAHLRDDNARDIVC IAGGSGLAPMLSVARGALAQEGAQRVHFFYGGRSQPDLGAMAALDDLVGDNRLALSVV LSAPGPELGWQGPTGFVHAEVERVLVAPLDRFEFYFAGPPPMIEAVQALLMHTHRVPF EQMHFDRFV" gene 104756..106534 /locus_tag="Rpic12D_3562" /db_xref="GeneID:8021249" CDS 104756..106534 /locus_tag="Rpic12D_3562" /inference="protein motif:PFAM:PF00158" /note="PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; 4-vinyl reductase 4VR; Activator of aromatic catabolism; SMART: AAA ATPase; KEGG: reu:Reut_B5673 helix-turn-helix, fis-type" /codon_start=1 /transl_table=11 /product="sigma54 specific transcriptional regulator, Fis family" /protein_id="YP_002983494.1" /db_xref="GI:241665135" /db_xref="InterPro:IPR002078" /db_xref="InterPro:IPR002197" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR004096" /db_xref="InterPro:IPR010523" /db_xref="GeneID:8021249" /translation="MAKRHPRKPKPDATAPARPHRDTKHTGATEIRVPAIHDLAKRLR FAPQQGRIWLDDQRMMLMHISSLGALRQELIESLGKETARGLITRIGYQAGTHDAAMS RKVRAGFSSYDDFLAGPQLVSLEGMVHCEPVALDIDVQRGRYFGDFYLIDSSEAEAHI ASYGIGNEAVCWMLIGYACGYTSAFMGRPILWREIECRGMGHAKCRVVGKPVEEWEDA EDDLRFLQIGDFVKWAPQPEAALPATSRIAARLSNAPENSFGVVGISAGFNTVCHMVN KVAPTEATVLFLGESGVGKEVFANNLHRLSKRADGPFVAVNCASIPEHLMESELFGVE RGGFTGATTSRPGRFERADGGTLFLDEIGTLSLTAQGKLLRALQQGEIERVGDTRTRK VNVRVIAATNVNLREAAKAGQFREDLFFRLNVFPIQVPPLRERRDDIPLMMNWFLQRM AKKHDKQITGFRERAVDALFAYDWPGNVRELENMIERAVILAEDGGALDLCHLFTSGE EIDTASFILKRSGNIGQSSDTVEDVASSTTAIPRPGLAETEVAMLRAAVIEANGNLSR AARVLGISRPTLAYRLRKYQIPVDGS" gene complement(106598..107974) /locus_tag="Rpic12D_3563" /db_xref="GeneID:8021250" CDS complement(106598..107974) /locus_tag="Rpic12D_3563" /inference="protein motif:PFAM:PF03349" /note="PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: reu:Reut_B5672 aromatic hydrocarbon degradation protein" /codon_start=1 /transl_table=11 /product="aromatic hydrocarbon degradation membrane protein" /protein_id="YP_002983495.1" /db_xref="GI:241665136" /db_xref="InterPro:IPR005017" /db_xref="GeneID:8021250" /translation="MKGNYVRAATAICVAICGTHARATDVFNLEGFGPVSRAMGGTGA AFDIGPAAMMENPATLGLMGEGRHFSLGLDVVSTDIKVTNTATGETASSGNHGNNNGP YFAPQTAFVYRQGRYAFGAGIFAEGGLGTQYGGSSFLSRTSNGVDTGLDQFSRLLVLR VPFSAAYHVTDKLTVGASVDAVWTSLNLGTLLDVSQIGTLAGQGRVSGTLVPTLLGVP GLSGGSIDFSRNAPVGGGAQAWGIGGRLGLTYQVTPDTRIGAAYQAKTHVGDLTGQAT LSAVSSVAGNIPLKGDVTVRNFQMPAQLTVGISHQFNDQLSVSADYQRVFWSSVMKDM TVGFVQSGSGANLDLSLPQNYRDISVFGIGAEYRYNAKWTFRGGFHYAQEAIPGNMLL AVVPATPTTSLTGGVSYAIGKNDVIDFALSVALRKTLDNASQPNTAVPISVTHSQVNA VIAYQKRF" sig_peptide complement(106598..106669) /locus_tag="Rpic12D_3563" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.945) with cleavage site probability 0.790 at residue 24" gene 108420..110114 /locus_tag="Rpic12D_3564" /db_xref="GeneID:8021251" CDS 108420..110114 /locus_tag="Rpic12D_3564" /inference="protein motif:PFAM:PF00158" /note="PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; 4-vinyl reductase 4VR; Activator of aromatic catabolism; SMART: AAA ATPase; KEGG: reu:Reut_B5671 helix-turn-helix, fis-type" /codon_start=1 /transl_table=11 /product="sigma54 specific transcriptional regulator, Fis family" /protein_id="YP_002983496.1" /db_xref="GI:241665137" /db_xref="InterPro:IPR002078" /db_xref="InterPro:IPR002197" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR004096" /db_xref="InterPro:IPR010523" /db_xref="GeneID:8021251" /translation="MEAKLNYPSDADLRRLLRFDPESGTIWLGERRMLLLHTAALSGL RQDLINSVGPVHARRLLTRMGYASGRRDAEFARKTRGALSLDAAFMVGPQLHMLEGAV RVTPIQLDFDPASGRFHGEFRWDNSWEAHAHRQAFGLVDEPACWIQLGYASGYTSAFM GRLILFKETHCAACGADHCEIVGKPIDEWPDGDEQRQYFEDESLLDTIAALNEQVQAL KTTIESTCEPNVAAGMLVGRSPAFQRAHELLNRAAATQVTVLLTGETGVGKERFARAL HQGSARAAGPFVAVNCAALPADLIEAELFGVERGAYTGAHAARSGRFERADGGTLFLD EVGDLPLPAQAKLLRVLQEGEIERLGAETTRKVNVRLVAATNVDLEAAVAQGRFRRDL LYRLNVYPICIPPLRERTTDIEPLANHLLARFTALHQKRLAGFGERAMQALVHHDWPG NVRELENLVERGVILAPQGENIEIEHLFPNQPTGVQSQLSAQGRLAPVRLESEQALCT RILDSGLSLEALETQLLDLAVERAKGNLSGAARQLGLTRPQLAYRLKRHLDRGSEE" gene 110111..110860 /locus_tag="Rpic12D_3565" /db_xref="GeneID:8021252" CDS 110111..110860 /locus_tag="Rpic12D_3565" /inference="protein motif:PFAM:PF07729" /note="PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: reu:Reut_B5670 GntR family transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, GntR family" /protein_id="YP_002983497.1" /db_xref="GI:241665138" /db_xref="InterPro:IPR000524" /db_xref="InterPro:IPR011711" /db_xref="GeneID:8021252" /translation="MKRAIQAGVSGTHLGSAATAAPAEPEIPRTLCERAYLDLRQDIV QGRLAPGERLRVEHLKDHYSVGAGTLREALALLVSDALVTVEGQRGYRVTDISLADLQ DLTDTRVMLETEAIRLSIRHGDAEWEAHLRAAFDALSDAEARGPSANPEHWERANRHF HQALIAAHRSPWSKYLLELLYRHGERYRHVAIRLGSAQPSSRNVHEEHTLIFEAALAR QEARAALALEAHIRLTHELLVKLGLGMTAEA" sig_peptide 110111..110173 /locus_tag="Rpic12D_3565" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.763) with cleavage site probability 0.710 at residue 21" gene complement(110945..113605) /locus_tag="Rpic12D_3566" /db_xref="GeneID:8021253" CDS complement(110945..113605) /locus_tag="Rpic12D_3566" /inference="protein motif:TFAM:TIGR01591" /note="TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: sen:SACE_2432 formate dehydrogenase, alpha subunit" /codon_start=1 /transl_table=11 /product="formate dehydrogenase, alpha subunit" /protein_id="YP_002983498.1" /db_xref="GI:241665139" /db_xref="InterPro:IPR001041" /db_xref="InterPro:IPR001450" /db_xref="InterPro:IPR006478" /db_xref="InterPro:IPR006655" /db_xref="InterPro:IPR006656" /db_xref="InterPro:IPR006657" /db_xref="InterPro:IPR006963" /db_xref="InterPro:IPR017900" /db_xref="GeneID:8021253" /translation="MVRLTIDGAPWETAEGTLLIDALSAAGSAVPNLCHDKRLMPFGG CRLCVVHVDGYANPVASCTTEVAEGMSVQTDSSTLQALCRTNLELIAARYPRSAYAAD PRHPFHRLLTDYGVPPGGKREDGLFRDDSHPYLGVSMDRCVYCQRCVRICEEVQGQFI WEAIGRNDASRIAVGRGPTLREAGCVSCGACVDTCASGALFDKRQVSRPTAWTRTTCA YCGVGCQMDVGVANGRVVTVRPADRPVNRGHLCVKGRYAFEYNHAPDRVTQPMLRRDG RWQPVGWGEALDFAATQLQAIVMRHGPDAVGVLASSRATNEENYLAQKFARVVLGTHN IDCCARVCHTPSARALQTMLGIGAATNSFDDIERASAFLVCGANPTENHPVVGARIKQ AVLKGARLVVIDPRRTELAALADVHLPVRTGCNVPLFNALAAAMIEEGWVDRAFLAER VDGFEAFAAHVAAFSPERVADLCGVPAAAIRAAARIYAQSRPAMCFHGLGVTEHLQGS EGVMALVNLALLTGNLGKPGAGINPLRGQNNVQGAAQMGCDPSVLTGAQSIAQAGARF EQAWGTRLPATRGLDVLEMMDAAQAGRLKALWVMGYDIYLSLANANATAAALAALDLV IVQDLFVNQTAEAFGTVFLPAASSFEKDGTFMNSDRRVQRVRAATTAPGQARPDWWII QALAARMGKPKGFAFEGPQQIWDEVRALWPDGAGLTYARLEHEDLHWPCLDQSHPGTA VLHRDAFVGSKTATLVPVPYVPTPEQTDDAYPLLLTTGRVLDQFNAGTMSCRTPNAAL RPSDTLDMAPVDAARLGLVEGEMVRVSSRHGSAALPLHITDAMQAGQLFCSFHRPDLR INALTSPVRDWLVHAPEFKVTAVRVEKVAG" gene complement(113593..115035) /locus_tag="Rpic12D_3567" /db_xref="GeneID:8021254" CDS complement(113593..115035) /locus_tag="Rpic12D_3567" /EC_number="1.6.99.5" /inference="protein motif:PRIAM:1.6.99.5" /note="PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: swi:Swit_1474 NADH dehydrogenase (quinone)" /codon_start=1 /transl_table=11 /product="NADH dehydrogenase (quinone)" /protein_id="YP_002983499.1" /db_xref="GI:241665140" /db_xref="InterPro:IPR011538" /db_xref="GeneID:8021254" /translation="MANPRQRHAATRGFYHLEHTAISECACTGLACFAARADRPQRWQ AAATQVPALYCLGKCYAAPSDGAHDNRPHIGEHASHPVLLGNVLRGGVRHLAAYLEVG GGDALALARQMAPHALVALVNASRLRGRGGAGFPAGVKWQAVANEAAATKYVVVNADE GDPGAFSDRFLLEDDPFLVIEAAAIAAHAVGARHGYLYLRKEYPVAAQVLSRALEQAR AAGWLAPAFELELVVGQGAYICGEETSLLNALEGHRPEVRPRPPQITRHGLFGAPTLV HNVETLCAIPWIVKHGAAAYAALGFSGSRGTKLLSLNSLFRRPGLYEVEFGITLADIV DQLGQGLRRGRLIGLMVGGPLAGIVPPALLHTRLGYEDMQAIDCAVGHGGVIAFGDDT PIARIVAEVLRFGARESCGKCTPCHLGTPMLAAMAQAAAGGMPIDGSRFNRLIDALAA TSLCGHGRGLAEFVRSVQRHYPQESRAWSD" gene 115281..117047 /locus_tag="Rpic12D_3568" /db_xref="GeneID:8021255" CDS 115281..117047 /locus_tag="Rpic12D_3568" /inference="protein motif:PFAM:PF00501" /note="PFAM: AMP-dependent synthetase and ligase; KEGG: bte:BTH_II0927 acetyl-CoA synthetase" /codon_start=1 /transl_table=11 /product="AMP-dependent synthetase and ligase" /protein_id="YP_002983500.1" /db_xref="GI:241665141" /db_xref="InterPro:IPR000873" /db_xref="GeneID:8021255" /translation="MDTSPIIHKTAADLRVRPNLADYEAECRRFSWEAVRRELTGGPP GVVNIAWHAVDRHVAGGAGNQTAFRFLAIGAPCHTVSYAQLSAQTNRFCNVLRALGIG KGDRLFILAGRIPELYVGLLGALKNGTVVSPLFSAFGPEPIATRIQLGDGTVLLTTDA LYARKVAKWRDRMPTLKHVLLVAEDGGVTSVPGTLDLGSLLCQASDACEITPTVADDM ALLHFTSGTTGTPKGAVHVHGAVATHWATGKYALDLHPSDIYWCTADPGWVTGTSYGT IAPLLHGVTSIVDREEFDAERWYGILRDERVSVWYTAPTAIRMLMKAGPDLARRYALA PLRFIASVGEPLNPEAVWWGKDVLGLPIHDNWWQTETGGIMIANTPAFDIKPGSMGRP LPGVEAAIVQRHEDGTVVVVDQPDQQGELALRQGWPSMFRGYLNNDERYRKSFAGEWY LTGDLARRDADGYYWFVGRADDVIKSAGHLIGPFEVESALMEHPAVAEAGVIGKPDPV VGEVVKAFVSLNPGFTPGDALRMELLAHARTRLGAAVAPKEIAFLELLPRTRSGKIMR RLLKARELGLPEGDTSTLEGGA" gene 117044..118069 /locus_tag="Rpic12D_3569" /db_xref="GeneID:8021256" CDS 117044..118069 /locus_tag="Rpic12D_3569" /EC_number="1.2.4.1" /inference="protein motif:TFAM:TIGR03182" /note="KEGG: bte:BTH_II0928 pyruvate dehydrogenase, E1 component, alpha subunit; TIGRFAM: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit; PFAM: dehydrogenase E1 component" /codon_start=1 /transl_table=11 /product="pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit" /protein_id="YP_002983501.1" /db_xref="GI:241665142" /db_xref="InterPro:IPR001017" /db_xref="InterPro:IPR017597" /db_xref="GeneID:8021256" /translation="MTDIDHPAPQPPAGPVPYDPAFAQALLRDMVRIRRFEEACAELY GAGKIRGFLHLYIGEEAVGVGTLHALSASDNVVATYREHGHALVRGMDMGVLMAEMYG KREGCARGRGGSMHLFDHAHRLYGGNAIVGGGLPLAVGLALAEKMQPSGRVTACFFGD GAVAEGAFHESMNLAALWKLPLLFCCENNLYAMGTALERHQAQTDLCAKAAAYAMAAQ SANGMDIVAVHDAAKDAVARIRSGAGPAFLELRTYRFRAHSMYDPDLYRQAAEVEAWK AIGPIHTFTARLKAEGKLTEEAFLALDAEANAEVARAKAFAEAGTWEPVDDLLSDVYT PAGAVAP" gene 118066..119049 /locus_tag="Rpic12D_3570" /db_xref="GeneID:8021257" CDS 118066..119049 /locus_tag="Rpic12D_3570" /inference="protein motif:PFAM:PF02779" /note="PFAM: Transketolase central region; Transketolase domain protein; KEGG: bte:BTH_II0929 pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase beta subunit" /codon_start=1 /transl_table=11 /product="Transketolase central region" /protein_id="YP_002983502.1" /db_xref="GI:241665143" /db_xref="InterPro:IPR005475" /db_xref="InterPro:IPR005476" /db_xref="InterPro:IPR017871" /db_xref="GeneID:8021257" /translation="MSRISYRDALREALREALLSDPRVFLMGEDVGRYGGTYAVSKGL LAEFGPERIRDTPLSELGFTGAGIGAALGGMRPIVEVMTVNFSLLALDQIVNTAALYR HMSGGQFSVPLVIRMATGAGRQVAAQHSHSFEGWYAGIPGLKVVAPATVEDARGMLAP ALADPDPVLIFEHAALYNMEGELPDAVADAGGIDIHSARIRREGKDVAIITYGGSLHK ALQAAQTLAAEGIAAEVLDLRTLRPLDDATIMASVAKCHRAVIVDEGWRSVSLASEIM ARIVEQAFYALDAPIARVCAAEVPIPYAKHMEDAALPQAGRIVDAVRQMMS" gene 119087..120214 /locus_tag="Rpic12D_3571" /db_xref="GeneID:8021258" CDS 119087..120214 /locus_tag="Rpic12D_3571" /inference="protein motif:PFAM:PF00198" /note="PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; KEGG: bte:BTH_II0930 branched-chain alpha-keto acid dehydrogenase subunit E2" /codon_start=1 /transl_table=11 /product="catalytic domain of components of various dehydrogenase complexes" /protein_id="YP_002983503.1" /db_xref="GI:241665144" /db_xref="InterPro:IPR000089" /db_xref="InterPro:IPR001078" /db_xref="InterPro:IPR004167" /db_xref="GeneID:8021258" /translation="MIAFRLPALGADMDEGTLLEWQVKPGDTVKKGQIIAVVDTSKAA IDVESWHEGTVAELLVTPGTKIPVGTPMAMFLEPGEAPGAVKRQPDMPGAARPLPPPQ TRRMASPAARQAARERGIDIDTITGTGHGGVITLADVEHATPVGSAVTGDRAADIRKT IAAAMTRSKREIPHYYVAETIPLAAMLAWLAQENTRRPITERLLPAAVLIKAVALSLR QFPELNGFYRDGAFEAAEAVHIGVAISLRQGGLMAPALLDAHAKPLTQLMQELTDLVR RCRAGTLKSSEMSAPTVTVTNLGDQGVAQVFGIIYPPQVALVGFGRIAEQPWAEAGGL KIMPAVTASLSADHRVSDGHRGARFLSELSDRLQHPEALDR" gene 120211..120480 /locus_tag="Rpic12D_3572" /db_xref="GeneID:8021259" CDS 120211..120480 /locus_tag="Rpic12D_3572" /inference="similar to AA sequence:KEGG:Bphy_7032" /note="KEGG: bph:Bphy_7032 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983504.1" /db_xref="GI:241665145" /db_xref="InterPro:IPR006163" /db_xref="GeneID:8021259" /translation="MNEADIRVIVLTALRAIAPEIDAADLRPDRPLRRQVDLDSMDWL HFLLALHDRLKVEIPESDYARLVTLNDVVAYLAQANPSPPAPAPP" gene complement(120535..120963) /locus_tag="Rpic12D_3573" /db_xref="GeneID:8021260" CDS complement(120535..120963) /locus_tag="Rpic12D_3573" /inference="ab initio prediction:Prodigal:1.4" /note="KEGG: bpm:BURPS1710b_2475 RedA" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983505.1" /db_xref="GI:241665146" /db_xref="GeneID:8021260" /translation="MKRQPASTLTTMDTRPVEILFSNLPQSDAIKAAITRFASRLDGF PCDIRRFRICLASDNPERSARGPFLVHIEVDIPGRALTADEASDVDVHVALLNAFREM RARVRQAISAQRASQPSCDGAPASSGVPRAARPATSTFRR" gene complement(121045..122445) /locus_tag="Rpic12D_3574" /db_xref="GeneID:8021261" CDS complement(121045..122445) /locus_tag="Rpic12D_3574" /inference="protein motif:TFAM:TIGR00229" /note="KEGG: reu:Reut_A1215 PAS; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; ATP-binding region ATPase domain protein" /codon_start=1 /transl_table=11 /product="PAS/PAC sensor signal transduction histidine kinase" /protein_id="YP_002983506.1" /db_xref="GI:241665147" /db_xref="InterPro:IPR000014" /db_xref="InterPro:IPR003594" /db_xref="InterPro:IPR005467" /db_xref="InterPro:IPR013656" /db_xref="InterPro:IPR013767" /db_xref="GeneID:8021261" /translation="MSKRTNPVPDAGLKRLTSRAITLMDWILAPAVIAGLLGAYLQLE QWIISANGWWAFIFISIPVGAVSYSYAHYLEEIRGLVASACQSAQRVERNRHRLEGII RASMEAIITIDESQRIVLFNPRAEGLFGYRAEDVLGAPIEQLIPQRFREAHRKLVQRF GVTPSSERRMAGQREVFALHADGHEFPIEASISHSEEDGKKLYTIMLRDITERLKAAK ALSRSQEELRYLADSILVVREEEQRRIADGLNQSLGRRLNTLHEDCAALSAQLRWAGH VQCKDGLAGIQANIDAAEISLRRICMDLRPQVLDELGLVPAVHWMVTDFEARYQIPVT LDVEPIDFDGRTANALFRIIQEALTNVVRHAHATAVRIRLRKTGATCEVSIVDNGVHS PSLALPCARSGLGLIGIRERARLLGGAAQTEQEDGTGFRVRVVFPLHKRMAHALDSLC SESGENPRHSIDELDA" gene 122812..123150 /locus_tag="Rpic12D_3575" /db_xref="GeneID:8021262" CDS 122812..123150 /locus_tag="Rpic12D_3575" /inference="similar to AA sequence:KEGG:BTH_I2124" /note="KEGG: bte:BTH_I2124 sigma 54 modulation protein, putative" /codon_start=1 /transl_table=11 /product="sigma 54 modulation protein, putative" /protein_id="YP_002983507.1" /db_xref="GI:241665148" /db_xref="GeneID:8021262" /translation="MAVSLDISFQDVPYSKDIEEAVIQQSNQLDHLSEVIARCRVCVI RGQKPLPERKTINVRIDVMTRHHSHVCGIGSDANAGVALRDAFAHVVRLLDGTALPGS EPAAALTRFG" gene 123747..125384 /locus_tag="Rpic12D_3576" /db_xref="GeneID:8021263" CDS 123747..125384 /locus_tag="Rpic12D_3576" /inference="protein motif:TFAM:TIGR02348" /note="TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: reh:H16_A1997 chaperonin GroEL (HSP60 family)" /codon_start=1 /transl_table=11 /product="chaperonin GroEL" /protein_id="YP_002983508.1" /db_xref="GI:241665149" /db_xref="InterPro:IPR001844" /db_xref="InterPro:IPR002423" /db_xref="InterPro:IPR012723" /db_xref="GeneID:8021263" /translation="MTAKTLVFHQTARRMMLNGIDLLARAVKVTLGPGGRNVIIERPG IGPMVANSGVVVARAISLREPFADMGARLLCEAAVRTSEVAGDGTTTATTLAHAIVAE GVKYVEAGHDPMQLKRGIEAAGALVASRLRDMAKPCTTVDEMRQIATISSSGDQTVGS LVAQAVEQVGKDGAISVEDGSKLDDQLEIAKGARVDRGFLSPFFATTESRAVVLENAW VLLCDATIASIAQLLPLLEAVSGTGKPLLVIANDVEGEALATLVVNNLRGALKNCAVR SPGFGDSRSEQLADLAALTGATVISPQTGVSLEHATLDQLGQVHRAETTKDATTLIAG DTVKADVERRIALLRAQLDEAKSDYDREQLQHRLARLSGGVAVIKVGAATETALHERK NRFQDALHATRAAVEEGIVPGGGVALLRAQSAIDTWQAPNAEQAAGARIVHTALAAPM LQIAANAGADAQAVVHQVLAGTGSHGYDAATDRYGDMLELGVVDPVKVVRTALQNAIS IAALLLTTDCMVAELRLEPAQASDETIGSMHFDSGYA" gene 125426..126787 /locus_tag="Rpic12D_3577" /db_xref="GeneID:8021264" CDS 125426..126787 /locus_tag="Rpic12D_3577" /inference="protein motif:TFAM:TIGR01513" /note="TIGRFAM: nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like; KEGG: bpm:BURPS1710b_0939 nicotinate phosphoribosyltransferase" /codon_start=1 /transl_table=11 /product="nicotinate phosphoribosyltransferase" /protein_id="YP_002983509.1" /db_xref="GI:241665150" /db_xref="InterPro:IPR006405" /db_xref="InterPro:IPR015977" /db_xref="GeneID:8021264" /translation="MATSPICTSPLLTDLYELTMMQAYRDAGMDGIASFECFVRKLPP GRNFLMAAGLEQVLDFLASLRFSEDEVASLAALGRFDDAFLQSLLDLRFTGDVHAMPE GTLFFPDEPILRIVAPLREAQLVESRVMNLLHYETLVASKAARVALAAQGRLLVDFGL RRAHGAEAGMLSARASYLAGFSGTATLLAGVRYGIPVYGTMAHAYVQAHRDEAQAFES FARSQPTNTTLLIDTYDTEAAARKVVELARKLCGDGITIQAVRLDSGDLDWHARQVRQ ILDEGGAPEISIFASGNLDEYRVRDLVRGGAPIHGFGVGTRMNTSADAPYLDCAYKLT EYAGLPRRKRSEGKATWPGRKQVYRRYTPTGRILGDALTIEGDQCEGVPLLQPYVRAG ERVQALPSLEAARVHAQAQLNALPPHLRALEAGEPYPVLVRQALVELARMADDIAAGR PRH" gene complement(126895..127566) /locus_tag="Rpic12D_3578" /db_xref="GeneID:8021265" CDS complement(126895..127566) /locus_tag="Rpic12D_3578" /inference="protein motif:PFAM:PF04405" /note="PFAM: protein of unknown function DUF542 ScdA domain protein; Hemerythrin HHE cation binding domain protein; KEGG: rso:RS02289 cell morphogenesis/cell wall metabolism regulator" /codon_start=1 /transl_table=11 /product="protein of unknown function DUF542 ScdA domain protein" /protein_id="YP_002983510.1" /db_xref="GI:241665151" /db_xref="InterPro:IPR007500" /db_xref="InterPro:IPR012312" /db_xref="GeneID:8021265" /translation="MALLDQPLGHLARNIPGATGIFHEYQLDFCCGGQHSLREAAQAR GIDAGPIAERLEALNAAVTPDQVVDWTTVSPSMLIDHIVERFHDRHREQLPELIRLAR RVEHVHGDREDCPVGLADLLDGMQQELESHMQKEEQILFPMLSRGHGSRAGGPIAVMR MEHDQHGDALQQLMTLTNDITLPRGACTTWRALYLGLRAFREDLMEHIHLENNVLFEG AAGAG" gene 127731..129266 /locus_tag="Rpic12D_3579" /db_xref="GeneID:8021266" CDS 127731..129266 /locus_tag="Rpic12D_3579" /inference="protein motif:PFAM:PF00158" /note="PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; GAF domain protein; KEGG: rso:RS02290 anaerobic nitric oxide reductase transcription regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, NifA subfamily, Fis Family" /protein_id="YP_002983511.1" /db_xref="GI:241665152" /db_xref="InterPro:IPR002078" /db_xref="InterPro:IPR002197" /db_xref="InterPro:IPR003018" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR011704" /db_xref="GeneID:8021266" /translation="MIDRLLLTDLVADLPPAVRMQRLVGSLRTHFRCGAVALLKLEED HLRPVAVDGLVRDALGRRFVVGQHPRLAAILARHGVTCFHHDSTLPDPYDGLIDEQAG VPLPVHDCMGLGLQVEGRPWGVLTLDALKVGTFDADAQAELGRLAVVVEAAARTTRLE AEIRALRATRADSPAGDATTDASEIVGQSPAIHQLLHELEVVADSELPILVLGETGVG KELFVHRLHRLSRRRDRPLVHVNCAALPESLAESELFGHVKGAFSGATGERPGRFEAA DGGTLFLDEVGELPLTVQAKLLRALQNGEIQRLGADRPRHVDVRVIAATNRNLRERVR DGAFRADLYHRLSVYPVPIPPLRERGNDILLLAGRFLEHNRARLGLRSLRLSPDAERA LRSYPWPGNVRELEHVISRAALKVLSRGARRDDIVTLGAELLDLDTEVASPDTSSPDV PQDVRPGTPLRDAVADFQRRCIESALATHDDNWARAARALGLDASNLHKLARRLGLKP ADG" gene 129453..131504 /locus_tag="Rpic12D_3580" /db_xref="GeneID:8021267" CDS 129453..131504 /locus_tag="Rpic12D_3580" /inference="protein motif:TFAM:TIGR02487" /note="TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; PFAM: ATP-cone domain protein; KEGG: rso:RSp0963 anaerobic ribonucleoside triphosphate reductase" /codon_start=1 /transl_table=11 /product="anaerobic ribonucleoside-triphosphate reductase" /protein_id="YP_002983512.1" /db_xref="GI:241665153" /db_xref="InterPro:IPR005144" /db_xref="InterPro:IPR012833" /db_xref="GeneID:8021267" /translation="MACTQVTKRDGSLAAFDGQKIHRAMAAAGQATGEFDTQEAQRLS LYVVDQVSALDCPGIEAIQNHVEETLVDAGYWRTARAYIVYREQHARLRALRHTLVDV ESTMDEYLQQRDWRVNANANQGYSLGGLILNVAGKVTANYWLSHVYSPEAGAAHREGD IHIHDLDMLSGYCAGWSLRQLLTEGFNGVSGKVEATPPRHMSAAIGQIVNFLGTLQNE WAGAQAFSSFDTYMAPFVRRDAMSYTAVRQAMQELIYNLNVPSRWGTQTPFTNLTFDW TCPADLREQVPYIGGEEMPFTYGDLQPEMDMINRAYIDVMMAGDAKGRAFTFPIPTYN ITPDFDWDHPNTTLLFEMTARYGLPYFQNFLNSDLEPHMVRSMCCRLQLDLRELLKRG NGLFGSAEQTGSIGVVTVNCARLGYRYAGDEAALLAQLDTLLALGRDVLEVKRKFVQR LIDQGLYPYTRRYLGTLRNHFSTLGVNGINEMVRNFTHDADDITTPAGHAMAIRLLDH VRQRITEFQEATGHLYNLEATPAEGTTYRFAREDRKRWPGILQAGTAEQPYYTNSSQL PVGYTDDPFEALARQEALQGKYTGGTVLHLYMNEAISSPQACRELVRRALANFRLPYI TITPTFSICPKHGYLSGHHAFCPKCDAELLAHQPHDNCGCASTATSASPTHVNHEGAS V" gene 131501..131677 /locus_tag="Rpic12D_3581" /db_xref="GeneID:8021268" CDS 131501..131677 /locus_tag="Rpic12D_3581" /inference="similar to AA sequence:KEGG:RS02295" /note="KEGG: rso:RS02295 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983513.1" /db_xref="GI:241665154" /db_xref="GeneID:8021268" /translation="MNTLSQPSTSAFQFDDSQRTRCEVWTRVMGYHRPVSSFNIGKQG EFGERRFFLEERAR" gene 131640..132353 /locus_tag="Rpic12D_3582" /db_xref="GeneID:8021269" CDS 131640..132353 /locus_tag="Rpic12D_3582" /inference="protein motif:TFAM:TIGR02495" /note="TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; PFAM: Radical SAM domain protein; KEGG: rso:RSp0965 putative ribonucleotide reductase activating transmembrane protein" /codon_start=1 /transl_table=11 /product="anaerobic ribonucleoside-triphosphate reductase activating protein" /protein_id="YP_002983514.1" /db_xref="GI:241665155" /db_xref="InterPro:IPR007197" /db_xref="InterPro:IPR012840" /db_xref="GeneID:8021269" /translation="MNAASFLKNGPAEPTQYTPPAIGGVTPFSSVDWPGQLAAVVFIA GCPWRCHYCHNPHLQTRARSLDWNDVDAFLQKRAGLLDGVVFSGGEPLSEPRLPELMR AVRALGFKIGLHTGGIYPARMAEALPLVDWVGLDIKTTGQRYDALTGRRGSAAPVDTC LDLLLQSDCAFECRTTWHPSWLPEPQLLALAQSLSQRGVKHYAIQAYRSAPGTLATTL PSDTTQRALAACFSSFSCR" gene 132358..133035 /locus_tag="Rpic12D_3583" /db_xref="GeneID:8021270" CDS 132358..133035 /locus_tag="Rpic12D_3583" /inference="protein motif:PFAM:PF00027" /note="PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; regulatory protein Crp; KEGG: rso:RS02297 transcription regulator protein" /codon_start=1 /transl_table=11 /product="transcriptional regulator, Crp/Fnr family" /protein_id="YP_002983515.1" /db_xref="GI:241665156" /db_xref="InterPro:IPR000595" /db_xref="InterPro:IPR001808" /db_xref="InterPro:IPR012318" /db_xref="GeneID:8021270" /translation="MAETLDIGNLLKHTRLFEDFDADDMAVLARDCRTQRVARHDIVF NRGDHADGFYVVAVGAIKLVLPGPHGQRKVIEFFGPGQCFGEPFMFINRPYAADAQAM EDSLLVWIGKPAIDAALDVHPHLARQMLAGLSARLHTLMCDIETVKLQSANERLVGYL LSLPRKFDRTRFPCSKSLVASKLGLAPATLSRVLRQLIQDGLILVEGRDVVIPNSVAL ERQLQAA" gene complement(133132..133557) /locus_tag="Rpic12D_3584" /db_xref="GeneID:8021271" CDS complement(133132..133557) /locus_tag="Rpic12D_3584" /inference="protein motif:PFAM:PF08859" /note="PFAM: DGC domain protein; KEGG: rso:RS02298 putative lipoprotein" /codon_start=1 /transl_table=11 /product="DGC domain protein" /protein_id="YP_002983516.1" /db_xref="GI:241665157" /db_xref="InterPro:IPR014958" /db_xref="GeneID:8021271" /translation="MSSNHLPLVYACSGCSSVAQAANRLAVDLDRAGRAEMSCISGVG GGVRALVKTARSGRPILALDGCALACVKACLATAGVTADVHLVLNQLGAKKRYHADCG EEELAVATALVDEAVTALQQQIDAASGCAMPAAVSVGTD" sig_peptide complement(133132..133197) /locus_tag="Rpic12D_3584" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.989 at residue 22" gene complement(133590..134006) /locus_tag="Rpic12D_3585" /db_xref="GeneID:8021272" CDS complement(133590..134006) /locus_tag="Rpic12D_3585" /inference="similar to AA sequence:KEGG:RS02299" /note="KEGG: rso:RS02299 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983517.1" /db_xref="GI:241665158" /db_xref="GeneID:8021272" /translation="MMLRPPATLVRMARRLPTPLTSLPFVLGLDLARRLSWLTPPPEL EGRRFAITVEDLGLRACFCCRGGAFHLLSGQVPELELHAGVAEFVALIRGTADADTLF FQRRLKIAGDTELGLIVKNWLDAAARPAWLARWQSR" gene complement(134003..134887) /locus_tag="Rpic12D_3586" /db_xref="GeneID:8021273" CDS complement(134003..134887) /locus_tag="Rpic12D_3586" /inference="protein motif:PFAM:PF01136" /note="PFAM: peptidase U32; KEGG: rso:RS02300 hypothetical protein" /codon_start=1 /transl_table=11 /product="peptidase U32" /protein_id="YP_002983518.1" /db_xref="GI:241665159" /db_xref="InterPro:IPR001539" /db_xref="GeneID:8021273" /translation="MSYEISLGPLLYYWPRLQTFDFYAEVAASPVDIVYVGETVCSRR HELRADDWLDIAAMLREAGKSVVLSTRTLIETSAEAQALRKQCQQDDWLVEAGELGAV RLLGGRPFVAGPHCNAYHGATLAWLAGLGAIRAVMPLEMSQATLAELMREKPDALEIE AMVWGRLPLAFSARCFTARHFRLNKDDCGFRCIEHPDGLAVRTREGQEFLAINGIQTQ SGQCLDMLDQAPALSALGVKVLRVSPQSRGTLDAVAALDAQRRGEPAPAVQPPEGIGR CNGYWHGRSGIDWLETPR" gene complement(134898..135962) /locus_tag="Rpic12D_3587" /db_xref="GeneID:8021274" CDS complement(134898..135962) /locus_tag="Rpic12D_3587" /inference="protein motif:PFAM:PF01136" /note="PFAM: peptidase U32; KEGG: rso:RS02301 protease protein" /codon_start=1 /transl_table=11 /product="peptidase U32" /protein_id="YP_002983519.1" /db_xref="GI:241665160" /db_xref="InterPro:IPR001539" /db_xref="GeneID:8021274" /translation="MTERKTTLADKSQTPAMTQTSSTIELVAPAGSLAALKAAVDAGA DTVYLGLKNATNARNFAGLNFTEADIRTGVELAHQKGRQVLFAINTFPQAGRGIEWRM AIDAAYMLGADAVILADPGLMAYARDRYPDLRLHLSVQGSATHADAIELMREQFSIHR AVLPRVLTLTEVERVIRQTSVQIEVFGFGSLCVMAEGRCLLSSYATGDSPNNKGVCSP AHAVRWMERDGNLDARLNDILIDQYAPGEAAGYPTLCKGRFLVDDEVDHVLEEPTSLN ALSLLPRLLAMGVSAIKIEGRQRSPAYVAQVVATLRAALDAAQADPARFSVRPDWQAA LVRHAEGAHVTQGAFDRPWK" gene complement(135959..137242) /locus_tag="Rpic12D_3588" /db_xref="GeneID:8021275" CDS complement(135959..137242) /locus_tag="Rpic12D_3588" /inference="similar to AA sequence:KEGG:RS02303" /note="KEGG: rso:RS02303 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983520.1" /db_xref="GI:241665161" /db_xref="GeneID:8021275" /translation="MSATAPTLFYERMPPPGVVFGCLLPVPWAGAAVGLLLAFGPTGG LPDRFAPLALALVHGLAVGMLLPAMLGALFQLFPVVAGVPVPGARWVSPCVAATCVAT AIALATGFLGGGRTAFALAAWFGAPLLAIPAVLLILGGLHVVKAADMHGTVRTLRRIG WALLLTLATGATLGTVLALGMFSPAPVLLNLHVGWGLGGWLATLLAGVASTVLPMFWQ SPRLPERWHRWMPGWLWAPLLLGSLIGWRGGTALWQTWGWLALGALSAAGLGAVYRAR RRHDPGWPLWLGATGAWFAVAVLGIAARWLPAGWPVAWWMGVLALVGGGVLPINAMLG KIIPFMVWMHLRRLVPRHVRLPAMQTLIGERQQHWHARLLLLAALALLLLPVSPGWMA MPAGLLFAVSQLWLGAQLCRALWTFRGVRRAFTRG" gene 137478..138794 /locus_tag="Rpic12D_3589" /db_xref="GeneID:8021276" CDS 137478..138794 /locus_tag="Rpic12D_3589" /inference="protein motif:PFAM:PF07690" /note="PFAM: major facilitator superfamily MFS_1; KEGG: rso:RSp0972 nitrite/nitrate ABC transporter transmembrane protein" /codon_start=1 /transl_table=11 /product="major facilitator superfamily MFS_1" /protein_id="YP_002983521.1" /db_xref="GI:241665162" /db_xref="InterPro:IPR007114" /db_xref="InterPro:IPR011701" /db_xref="GeneID:8021276" /translation="MSSATATSPAIAAQAAVAPRAYAVLASSTFAFTICFAVWTMFAI LGIPLQKQLGLSETEFGLIASMPVLTGSLVRVPLGMWTDRFGGRIVFFLLMLATVAPI WFVADATQLWQFLALGMLVGLAGGSFSVGTPYVARWFPKKRQGFAMGIFGAGNAGAAL NKFVAPLLVLSAGTWTVVPRVYAMAMLVTALLFWFGSATDPSHATGKSVSLRAQLREM RDPRVWRYAQYYSVVFGGYVGLSLWLTRYYVAEYGFSIKTAAFLAACFSLPGGVLRAV GGWLSDRYGAYRTTWAVMWVCWVAFFLLSYPQTRFTITGTHGPLDFHIGLSPVAFTSL MGVVGVAMAIGKASVFKFISNDFTDNIGAVSGAVGLAGGLAGFVLPILFGVLVDLTGI HSTCFMLLYGAVCVSLVWMHFSFRAEGRATLIGRSSSTASLAQRLS" sig_peptide 137478..137549 /locus_tag="Rpic12D_3589" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.919) with cleavage site probability 0.630 at residue 24" gene 138844..140229 /locus_tag="Rpic12D_3590" /db_xref="GeneID:8021277" CDS 138844..140229 /locus_tag="Rpic12D_3590" /inference="protein motif:TFAM:TIGR00886" /note="TIGRFAM: nitrite transporter; PFAM: major facilitator superfamily MFS_1; KEGG: rso:RSp0973 nitrite/nitrate ABC transporter transmembrane protein" /codon_start=1 /transl_table=11 /product="nitrite transporter" /protein_id="YP_002983522.1" /db_xref="GI:241665163" /db_xref="InterPro:IPR004737" /db_xref="InterPro:IPR011701" /db_xref="GeneID:8021277" /translation="MTSNVLTHWEPENPSFWRVTGQSVAYRNLWISIPALMIAFAVWS LWSVVVVNLDKAGFALTKNQMFWLTALPALSGATLRIFYSFLVPIFGGRRWTALSTAS LLIPALGMGFALRDPQTSYPMLLVLALLCGLGGGNFSSSMANISFFFPKQKKGLATGL NAGIGNLGVSVVQFVTPLVISVGVFGALGGDPQTYTAGGVERSLWLQNAGFIWVPFIV VATLASWFGMHDIADAKASFADQAVIFKRTHNWLMCLLYVGTFGSFIGFSAGLALLTK SQFPNVNPTTYVFLGPLAGALTRPVGGWISDKVGGARVTLWTFAGMIAAVVGVLTFLP ADGYAGSFVGFLSMFIVLFALTGIGNGSTFRMIPIIFLTQHQRAARGKDEAAQRQAVQ DAGKESAAVLGFTGAIGAYGGFFIPKSFGTSLELTGSVNAALYCFISFYVLCLLVTWA VYARRNAPMPC" gene complement(140242..140910) /locus_tag="Rpic12D_3591" /db_xref="GeneID:8021278" CDS complement(140242..140910) /locus_tag="Rpic12D_3591" /inference="protein motif:PFAM:PF02588" /note="PFAM: protein of unknown function DUF161; KEGG: eca:ECA3669 hypothetical protein" /codon_start=1 /transl_table=11 /product="protein of unknown function DUF161" /protein_id="YP_002983523.1" /db_xref="GI:241665164" /db_xref="InterPro:IPR003740" /db_xref="GeneID:8021278" /translation="MKALEVTRHSTLEDVLAIVTGTLFVSLGITLFKQGGLLSGGTAG VAFLIHYATSLPFGAVFFTINLPFYYLAVRRMGWRFTCKTFCAVALVSWLSEVHAHFV HLDTLNPLYAGAIGGTLMGVGLIVLFRHQASLGGVNIVALYLQEKYGIRAGKFQMAVD VGIVLTSLFVVSPMALAASLVGAVALNLSIALNHRPGRYPAAQAALGAAPADRHGPHK RSVA" gene 141195..144932 /locus_tag="Rpic12D_3592" /db_xref="GeneID:8021279" CDS 141195..144932 /locus_tag="Rpic12D_3592" /inference="protein motif:TFAM:TIGR01580" /note="TIGRFAM: nitrate reductase, alpha subunit; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: rso:RSp0974 respiratory nitrate reductase alpha chain oxidoreductase protein" /codon_start=1 /transl_table=11 /product="nitrate reductase, alpha subunit" /protein_id="YP_002983524.1" /db_xref="GI:241665165" /db_xref="InterPro:IPR006468" /db_xref="InterPro:IPR006655" /db_xref="InterPro:IPR006656" /db_xref="InterPro:IPR006657" /db_xref="InterPro:IPR006963" /db_xref="GeneID:8021279" /translation="MSHFLDRLKFLTHVRSTFADGHGAVVNEDRRWEDGYRSRWQHDK IVRSTHGVNCTGSCSWKVYVKNGLITWETQQTDYPRTRPDLPNHEPRGCPRGASYSWY VYSAQRVKTPLIRGRLMAMWREARKTMDPVAAWESISQDPEKARRYKSVRGQGGFVRA DWDTATEIIAAANAYTIKRYGPDRVVGFSPIPAMSMVSYAAGARYLSLIGGVCLSFYD WYCDLPPASPQVWGEQTDVPESADWYNSTYLMVWGSNVPQTRTPDAHFYTEVRYKGTK TVAISSDYGEMVKFGDIWLAPKQGTDAALAMAMGHVVLKEFHTTGKSAYFRSYVKQYT DMPMLVLLRATEDGSYAADHFLRASHLAGNHGEANNPDWKTLLIDAPTGRLVVPNGAI GLRWNEAQHDGGAKVGRWNLELKDSADGSEIDPLLSLVATHDDVVDVSFPYFGGEHEA MLKRRVPVKRVTLADGTTACVATVYDLQLANYGVDQGLGGPNVAASFDDDVPYTPAWQ EKHTGVPRKQVIQVAREFADNADRTHGKSMVIVGAALNHWYHNDMIYRGIINLLMMCG CIGQSGGGWAHYVGQEKLRPQFGWAPLAFGLDWSRPPRQMNGTSFFYSHTSQWRHEKL SLDEILCPTADRARYAGQSLLDLNTKSERMGWLPSAPQLNANPLDVTDAAKAAGQDPV AYTVDQLKRGKLRFACEDPDHPDNFPRNMFVWRSNILGSSGKGHEYFLKYLLGTQNAL FSDEAAAIKPSEVEVREAAEGKLDLLTVLDFRMSTTCLYGDIVLPTATWYEKDDLNTS DMHPFIHPLSEAVHPLWESKTDWEIYKTIAKKFTEIAGPLLGTRHDLVCTPLMHDTPG ELGQPFAPKDWKYGECDLIPGKTAPAMTVVERNYADIYRKFTSVGPLLDKLGNGGKGI NWNTEHEVHELAGLTHKVTAPGVSQGRPRLETATDAAEMILTFAPETNGHVAVKAWEA LSRITGRDHTHLAVGREHDKIRFRDVQAQPRKIISAPTWSGLESEEVSYNAGYTNVHE LIPWRTLTGRQQFYQDHRWMIDFGEGACLYKPPIDTKTVQPMLGKHSNGHPELVLNWI TPHQKWGIHSTYSDNLRMLTLSRGGPHVWISEAEAKAAGLRDNDWVEVFNVNGTLTAR LVVSQRVPRGMCLMYHAQEKIVNVPGAETSGMRGGIHNSVTRTVTKPTHMIGGYAQQA YGFNYYGTVGSNRDEYVIVRKMQRVDWMEEQLAESHSGVSQ" gene 144929..146473 /locus_tag="Rpic12D_3593" /db_xref="GeneID:8021280" CDS 144929..146473 /locus_tag="Rpic12D_3593" /inference="protein motif:TFAM:TIGR01660" /note="TIGRFAM: nitrate reductase, beta subunit; KEGG: rso:RSp0975 respiratory nitrate reductase oxidoreductase protein" /codon_start=1 /transl_table=11 /product="nitrate reductase, beta subunit" /protein_id="YP_002983525.1" /db_xref="GI:241665166" /db_xref="InterPro:IPR001450" /db_xref="InterPro:IPR006547" /db_xref="GeneID:8021280" /translation="MKIRAQVAMVLNLDKCIGCHTCSVTCKNVWTSRDGVEYAWFNNV ETKPGVGYPKQWENQDKWQGGWQRHADGKLTPRQGGKLKILANLFANPNLPQIDDYYE PFTYDYARLQNAPLSQTPPTARPVSAITGKTMEKIEWGPNWEDDLGGEFESRSRDQLF EDIQKEMYSTFENTFMMYLPRLCEHCLNPTCVASCPSGSVYKREEDGIVLVDQDKCRG WRMCVSGCPYKKIYFNWQSGKAEKCTFCFPRIESGQPTVCSETCVGRIRYLGVMLYDA DRIEAAASVEDTKDLYNAQLDVFLDPHDPAIQAEALRQGIPQSWIDSAVKSPVYKMAC DWKVAFPLHPEYRTLPMVWYIPPLSPIQSAAESGVMGMDGMIPDVKSLRIPVRYLANL LAAGDEVPVVSALERMLAMRAYKRAQTVHGVQDLDVLHRVGLTPTQVEDMYQIMAIAN YEDRFVIPASHKEMAQDSFDEKGACGFSFGNGCSGGVSEGTFFGRKKASVSTISMPVS RKKSAA" gene 146491..147192 /locus_tag="Rpic12D_3594" /db_xref="GeneID:8021281" CDS 146491..147192 /locus_tag="Rpic12D_3594" /inference="protein motif:TFAM:TIGR00684" /note="TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; PFAM: Nitrate reductase delta subunit; KEGG: rso:RSp0976 putative respiratory nitrate reductase oxidoreductase protein" /codon_start=1 /transl_table=11 /product="nitrate reductase molybdenum cofactor assembly chaperone" /protein_id="YP_002983526.1" /db_xref="GI:241665167" /db_xref="InterPro:IPR003765" /db_xref="GeneID:8021281" /translation="MTTPSMYHLLSVLLTYPEPELLDALPELDQALGATPAARARLAP LLATLRDTDLITLQEHYVATFDRNPSHALHLFEHVHGESRDRGQAMVDLIDEYRKYGV EPADSELPDYVPLFLEVLGHLESTGHRAQATALLGDAIHVLAAIGERLTRDGTHYAGI FDVLLTLSDVQPQPLTEPPIRDMDEAMEHFGPGADGVEPLLRPALSAEQPVQFHPRKA VHPTPPQPSTHASLT" gene 147189..147872 /locus_tag="Rpic12D_3595" /db_xref="GeneID:8021282" CDS 147189..147872 /locus_tag="Rpic12D_3595" /EC_number="1.7.99.4" /inference="protein motif:TFAM:TIGR00351" /note="KEGG: rso:RSp0977 respiratory nitrate reductase transmembrane protein; TIGRFAM: respiratory nitrate reductase, gamma subunit; PFAM: Nitrate reductase gamma subunit" /codon_start=1 /transl_table=11 /product="respiratory nitrate reductase, gamma subunit" /protein_id="YP_002983527.1" /db_xref="GI:241665168" /db_xref="InterPro:IPR003816" /db_xref="GeneID:8021282" /translation="MTMLNTLLFGIYPYIAGTIFLLGSLLRFEREQYTWKSDSSQLLH TGTLRVGNLLFHVGILGLFFGHLAGLLTPVAVWDALGVPHSVKQLVAMTAGGILGSLC LVGLLLLIYRRLSSPRIRAVTRPGDKVLLAWLLVTLLLGLTTILTSAGHLDGHVMVLL MTWAQHIVTLQADASSYVAAVPLIFKLHLFMGMTLFLIFPFTRLVHVWSGLASVTYVG RAWQLVRGR" gene 147874..148395 /locus_tag="Rpic12D_3596" /db_xref="GeneID:8021283" CDS 147874..148395 /locus_tag="Rpic12D_3596" /inference="protein motif:TFAM:TIGR00176" /note="TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: rso:RSp0978 molybdopterin-guanine dinucleotide biosynthesis protein" /codon_start=1 /transl_table=11 /product="molybdopterin-guanine dinucleotide biosynthesis protein B" /protein_id="YP_002983528.1" /db_xref="GI:241665169" /db_xref="InterPro:IPR004435" /db_xref="GeneID:8021283" /translation="MPTCQRAVFGITGRSGSGKTTLIEAVLPLLRAQGLRVNVIKHSH HVLALEPPGKDSARVRAAGASEVMVASPYHYAIVHTLHDTPEPTLAELLARMSPADIT LVEGFRRESIPRIEVHRPALGKPPMYPDDDSILAVATNAPLALDRPRLFLDQPQGVAD FICQILELDLQPA" gene 148457..150412 /locus_tag="Rpic12D_3597" /db_xref="GeneID:8021284" CDS 148457..150412 /locus_tag="Rpic12D_3597" /inference="protein motif:PFAM:PF02518" /note="PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; GAF domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; GAF domain protein; KEGG: rso:RSp0979 putative transmembrane nitrate/nitrite sensor kinase transcription regulator protein" /codon_start=1 /transl_table=11 /product="GAF sensor signal transduction histidine kinase" /protein_id="YP_002983529.1" /db_xref="GI:241665170" /db_xref="InterPro:IPR003018" /db_xref="InterPro:IPR003594" /db_xref="InterPro:IPR003660" /db_xref="InterPro:IPR011712" /db_xref="GeneID:8021284" /translation="MNAPATSHLAMQPPVRQRLSTRIVAVSLTALALVLAMIGGTLWL SWQLEGAGAAINDTGSLRMRASQIGVAVLEARHGHTGMLAPQVDHLDATLASLKKGDA KRPLFLPADTEIRRQFDAVGTAWQTRLKPSIAADIAQPPGAPSIYLTHLPHFIAQADQ LVRMIEQSNAHKTTLLRLSQFALAVMACVGTLAMIYLLFLWIILPVMRLQEGLQRMAA HEFATRLSVDTRDEFGLLARGFNRMAEELQGLYADLASRVAQKTQQLAAQNRELSALY DITAFLNVSSDIDALCRGFLQRVADQFGAAGGSIRVMDPDGERLHLVATVGLPADLEE AEQCMRADTCLCGQATQQDVVVVHDFRRMRREGPTAAPTALPCQREGYTTVAVFRIMT QQAVLGTFSLHLRDNRQLPPNDLRLLETLGQHLGIALENLRLQAKATQLAVVEERNLV AQGLHDSIAQGLNFLNLQVQMLDAAMRDANLDEAREIVPLLRCGVEESYQDVRELLLN FRSKLESGELRPAVEQTLARFAQQSGIVPSLHYHEAGGAPLPADQQLQVLFILQEALS NVRKHAMASRVDVTITNGRDFELRVQDNGRGYDAREVAERTQAHVGLNIMRERAAYLL AQLQLEGRPGQGASVTLRLLEPQRQAA" gene 150440..151096 /locus_tag="Rpic12D_3598" /db_xref="GeneID:8021285" CDS 150440..151096 /locus_tag="Rpic12D_3598" /inference="protein motif:PFAM:PF00072" /note="PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; Bacterio-opsin activator HTH domain protein; SMART: response regulator receiver; regulatory protein LuxR; KEGG: rso:RSp0980 nitrate/nitrite response regulator transcription regulator protein" /codon_start=1 /transl_table=11 /product="two component transcriptional regulator, LuxR family" /protein_id="YP_002983530.1" /db_xref="GI:241665171" /db_xref="InterPro:IPR000792" /db_xref="InterPro:IPR001789" /db_xref="InterPro:IPR007050" /db_xref="InterPro:IPR013249" /db_xref="GeneID:8021285" /translation="MTIRILLIDDHTLFRSGIRLLLQRQSDFEVVDEAADGLEGIKLA KRHQPDVILLDLNMPGLSGLETLQLLVQDLPLAAVVVLTVSEEADELKAALRDGARGY LLKNIEAETLVAGIRRAAAGEPVISDRMTAKLVAHFRAPEKAPPAATTPMPDRLTPRE REIVKGLARGESNKEIARTLDVAESTVKIHVQNVLKKLNLTSRVQVAVYAVEHGLNGG" gene 151306..152448 /locus_tag="Rpic12D_3599" /db_xref="GeneID:8021286" CDS 151306..152448 /locus_tag="Rpic12D_3599" /inference="protein motif:PFAM:PF05175" /note="PFAM: methyltransferase small; ribosomal L11 methyltransferase; KEGG: rso:RSc3159 hypothetical protein" /codon_start=1 /transl_table=11 /product="methyltransferase small" /protein_id="YP_002983531.1" /db_xref="GI:241665172" /db_xref="InterPro:IPR002052" /db_xref="InterPro:IPR007848" /db_xref="InterPro:IPR010456" /db_xref="GeneID:8021286" /translation="MTHLPTLSWTDAGSETDAETHHTALWRSEAGNSPPKRVVIADDR TAADTAYRLACEGTALLWHGDFQNARQLLQAMSRRADRKPRKTAESAIDAFNLHRQAQ SQRARTLGMLLIPLDADYTVPLRRAPDVRAACREAYGPSDAASVVSLRELLGLIGAHE WRKKGVEIPALGGGRIHPHYGVFSPVRGEYIDLVANAPLPSTALAFDIGTGTGVLAAV LAKRGVKHIVATDQDPRALACARDNLAHLGLQSQVEVIEADLFPEGRAPLIVCNPPWL PARPSSPIERAVYDPDNRMLRGFLDGLAAHLEPAGEGWLILSDFAEHLGLRTRDALMA MIEAAGLQVVGREDIKPKHPKASDPNDPLHQARAAEVTSLWRLKAR" gene complement(152435..153703) /locus_tag="Rpic12D_3600" /db_xref="GeneID:8021287" CDS complement(152435..153703) /locus_tag="Rpic12D_3600" /inference="protein motif:PFAM:PF03486" /note="PFAM: HI0933 family protein; KEGG: rso:RSc3158 putative transmembrane protein" /codon_start=1 /transl_table=11 /product="HI0933 family protein" /protein_id="YP_002983532.1" /db_xref="GI:241665173" /db_xref="InterPro:IPR000192" /db_xref="InterPro:IPR000759" /db_xref="InterPro:IPR003042" /db_xref="InterPro:IPR004792" /db_xref="InterPro:IPR013027" /db_xref="GeneID:8021287" /translation="MSEPRNAPVVAVIGAGPAGLMAAEVLSRNGVRVEVFDAMPSAGR KFLLAGIGGMNITHAEPIDAFLGRYRTRRDALAPLIEHFSPDALRAWIHGLGIETFVG SSGRVFPTEMKAAPLLRAWLHRLREAGVKLHMRHRWIGWGDAQNASALRFETPDGERY MQADAVVLAMGGASWPRLGSNGAWVPLLEARGVQVAPLQPANCGFDASWSAHFQERFA GQPVKSVAIALPSAEGGPLQFRQGECVVTQTGIEGSLIYALSAPIRDALAAAGTVTVW LDLAPGWSAQRVATELMRPRGARSMSSHLQSKLNITGVKLGLLRECLSKEAFADLAQL ARAIKALPLTLLRPRPIDEAISTAGGVAFEALDARLMIERLPGVFCAGEMLDWEAPTG GYLLTACFASGAAAGQGVLDYLGQQGISVP" sig_peptide complement(152435..152503) /locus_tag="Rpic12D_3600" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.989) with cleavage site probability 0.989 at residue 23" gene 153923..154759 /locus_tag="Rpic12D_3601" /db_xref="GeneID:8021288" CDS 153923..154759 /locus_tag="Rpic12D_3601" /inference="similar to AA sequence:KEGG:RSc3157" /note="KEGG: rso:RSc3157 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983533.1" /db_xref="GI:241665174" /db_xref="GeneID:8021288" /translation="MSNKTHEIRPNQSIELLKELHILTRDGKMNQDSRRKLKQVYHLF QFIEPLMADVQQTKGHVTLVDHGAGKSYLGFILYDLFCKEQPGDGTSHIYGIETREEL VEKSTELAARLGFRGMSFLNLSVAESITSDRLPPTIDIVTALHACNTATDDAIRFALE KHAQYIVLVPCCQAEVAGVLRKNKSKSLGNALTEIWRHPLHTREFGSQVTNVLRCLQL EAHGYQVSVTELVGWEHSMKNELIIAQYKDLPRRRATERLNEVINALGLEELHERFFA PA" gene complement(154808..156280) /locus_tag="Rpic12D_3602" /db_xref="GeneID:8021289" CDS complement(154808..156280) /locus_tag="Rpic12D_3602" /inference="protein motif:TFAM:TIGR00254" /note="KEGG: bpy:Bphyt_4938 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein" /codon_start=1 /transl_table=11 /product="diguanylate cyclase" /protein_id="YP_002983534.1" /db_xref="GI:241665175" /db_xref="InterPro:IPR000160" /db_xref="GeneID:8021289" /translation="MQSASDSVSSPAALGVDLIDFFDVTPTSLWLEDYSDLHRLFAQW RTAGVTDLQRFLEEDVSRVAACSACIKVLRVNRRTLAMYAAQDAETLTARLADVLRDD MLEAHVGELVQLWSGSPSFESRSVNYTLDGRRLDILLKGVLLPDHHQPWDRVLVAVDD ITELEDARRRAAGSQLYARGVFEHAPVSLWVENFSTIKMLLDEVRMQGISDFRTFTDV HPEFVERCMQEIQVLDVNGFTLEMFKARSRSDLLGRLSEVFRDDMRSHFREQLIDLWD GRLFQQREVVNYALDGNPLNIHLQFSVFPGREQDWDMVLLALTDITARKKAESYLEYL GKHDVLTKLKNRSFYVDEVNRLERKGPFPVTVIMIDLNDLKTVNDQLGHAAGDALLRR AGEVLAKAIDKPAHAARIGGDEFAVLMPGADAQDGEALMESLRKLVELNNQFYSGPSL GFAMGCATCQEGERLEEALREADVAMYEDKRTQQVGVRAA" gene 156843..159059 /locus_tag="Rpic12D_3603" /db_xref="GeneID:8021290" CDS 156843..159059 /locus_tag="Rpic12D_3603" /inference="protein motif:PFAM:PF01433" /note="PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: rso:RS00411 putative aminopeptidase transmembrane protein" /codon_start=1 /transl_table=11 /product="Peptidase M1 membrane alanine aminopeptidase" /protein_id="YP_002983535.1" /db_xref="GI:241665176" /db_xref="InterPro:IPR014782" /db_xref="GeneID:8021290" /translation="MRDSTTHRRTATTRATNLRSRRGFKLALVAQAAAAMILAACGGG GDEALTPAGGKVDANGSQQQGNTNAQAPAVDASVPPVELPDTIKPVNYKLWFRPSADL NSFSGRADVEIKVTKQTGAVTLAVRDLKLDASRLTLTPTSGGGASRVLVPIPQSQGAF YDLRDPTGDIKPGNYVLHMEWTGTINFTKAEGIFKLGLQAATGESSDAIVTQGESNFA REWFPSWDEPAFRNTFEVTAEIPGDWKAVANGRQTGATKLPDGYQQVSFAKTPSMPAY LLFFGGGKFDILEDQFTNPLDGSSMRLRWWVPPGEAHSAVAGMQFTKEALNHYYNYFQ IPLPFDKMDTIVANDSYDNKNAGFGGMENWGAIFEFADQVLVPPDGAPTTVHSMGKAR SFVVVSHELAHQWFGDLVTLDWWDDIWLNESFANWFENVTKIALHPEFQGNTWADYAA VKQRVYTLDLQPTSVPVQHNLSDAGSMDFLDRFAYNKGGHVLQMIENYVGKDAMRKGL QSYLNKYKFGNGTPPRLWAELEAASGKPVGKVGDSFVRQTGVPLVSIDAQCNPATNQN VLTITQKAFPNKNVYSGYQWNIPLTIAYGDGLAQTQTVVLDQQTAQVTLPTCSAVLAN PTGLDYYVTNYSPTLWSALLAQAGTITNKATTTNIAGDATQLYNAQIIDKALYDQIVG IQNMQPAVATLRAQAVTPTGSLRPQAVQLQQMQNMDRPIHKFRYEGLMKHLTDIKR" sig_peptide 156843..156971 /locus_tag="Rpic12D_3603" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.995) with cleavage site probability 0.727 at residue 43" gene complement(159176..159499) /locus_tag="Rpic12D_3604" /db_xref="GeneID:8021291" CDS complement(159176..159499) /locus_tag="Rpic12D_3604" /inference="protein motif:PFAM:PF00543" /note="PFAM: nitrogen regulatory protein P-II; KEGG: rso:RS00410 P-II-like protein transcription regulator" /codon_start=1 /transl_table=11 /product="nitrogen regulatory protein P-II" /protein_id="YP_002983536.1" /db_xref="GI:241665177" /db_xref="InterPro:IPR002187" /db_xref="GeneID:8021291" /translation="MKEIRIVVRPQLLERMHEALRSCPGFPGMTVAEVNAYPPTASQA GAHSIKEDLTEFVPRVRIDIVASDALASVLFESAVKVLEHGQTGDSAIWMTDVIQATF LHRTG" gene complement(159496..162645) /locus_tag="Rpic12D_3605" /db_xref="GeneID:8021292" CDS complement(159496..162645) /locus_tag="Rpic12D_3605" /inference="protein motif:TFAM:TIGR00914" /note="TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: rso:RS00409 putative cation efflux system transmembrane protein" /codon_start=1 /transl_table=11 /product="heavy metal efflux pump, CzcA family" /protein_id="YP_002983537.1" /db_xref="GI:241665178" /db_xref="InterPro:IPR001036" /db_xref="InterPro:IPR004763" /db_xref="GeneID:8021292" /translation="MIDALIRGALKQRLVVAVIAAVLLFFGFDAARKLSLDAFPDVTN VQVQIATEAPGRSPEEVERFVTVPVEMAMTGLPALTEMRSLNKPGLSLITLVFTDETD VYFARQLVMERLMEVQSRMPAGVTPVLGPVSTGLGEVYQYTLDKPDDGDKELSVEELT QRRIAQDWVVRPLLRSIPGVAEINSQGGYEKQYQVLVNPERLRHHNVTVKQVFEALAA NNANSGGGVLPHFAEQYLIRGVGLVRDTNDIGAIVLKEVNGTPLTIRDVAEVKIGTAV RAGAVVKNGVTESVGGVVMMMRGGNAKEVVARIQDRVKAINNDGMLPDGLKIVPYYER SELVDSALQTVIKVLAEGVVLVVIVLLLFLGDIRSSLIVVGTLILTPLLTFMAMNKLG ISANLMSLGGLAIAIGLMVDGSVVVVENAFAHLAKPRDPNESRARVILHAVTEVATPV IFGVGIIILVFLPLMTLEGMEGKMFAPLAFTIAIALFFSLVLSLTLTPVLSSYLLKPK AHKHGEGEHSDDPHAEHDAHDTWLIRKMKKPYLRLLELSLNNGRKTVVVAVAVFLATG ALMPFLGTAFIPEMKEGSVVPGINRAPNISLEESIRMEMEAMRLVMQVPGVKSAVSGV GRGESPADPQGQNESTPIVSLKPRDEWPKGWNQDDIAEAMRKALQVLPGVQIVMAQPI SDRVDEMVTGVRSDVAIKVFGDDLNTLREKAEAIAKVAQGIQGAQDMRVERITGQQYL QIAIDRQAIARHGLNAADVHNVIETAIGGKEATEIFEGERRFSAVVRLPDAYRGSVEA IRNLIVAAPNGAQVPMESIARIDVTDGPAQISRELGKRRVVVGVNVRDRDLGGFVAEL QAAVAQKVKLPEGYYLEWGGQFQNMERAMGHLKVIVPITVAAIFFLLFLLFNSVRYAT LIILVLPFASVGGIIGLFVTGEYLSVPASVGFVALWGIAVLNGVVLVSTIRSLREQGM SVEESVRLGSRMRFRPVMMTATVAMLGLIPFLFATGPGSEVQRPLAIVVIGGLLTCTL LTLVMLPTLYKWFDEESKA" gene complement(162642..163862) /locus_tag="Rpic12D_3606" /db_xref="GeneID:8021293" CDS complement(162642..163862) /locus_tag="Rpic12D_3606" /inference="protein motif:TFAM:TIGR01730" /note="TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rso:RS00408 putative cation efflux protein" /codon_start=1 /transl_table=11 /product="efflux transporter, RND family, MFP subunit" /protein_id="YP_002983538.1" /db_xref="GI:241665179" /db_xref="InterPro:IPR006143" /db_xref="GeneID:8021293" /translation="MTRPSHRVASRTHESSLTMNAPASFSSSIRLAGVALAAMLLLGA CGKDAANDAKAAQQAVDPNLVVAQPTLVQRLKVAPVGKQPIAERLRVPGQIAFDEQRV ARIGATVTGRVTELVATPGQSVKAGDILAQLHSTELGAAQLAYQKAAAQRDLQARALG RAKLLLAADVIGSAELQKRQSELAMADAEVRAAIDQLRVMGVSPGTLAKMRTGGMSSI SPVVASISGTVVDRKVTRGQVVQPADELFTVADLSRVWVVGEVPENAAAGVRAGQAVE IDTGAGDRIVGKLIWVSDIVDPQTRTVTVRTEVDNAERTLKPSMLATLLIQSRPEERV VVPTSAVVREDNRDYVFVRASETNYQLTPVKLGDESNGVRPVISGVQAGQPIVVEGGF HLNNERKRAEMEGA" sig_peptide complement(162642..162794) /locus_tag="Rpic12D_3606" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.950) with cleavage site probability 0.432 at residue 51" gene complement(163859..165205) /locus_tag="Rpic12D_3607" /db_xref="GeneID:8021294" CDS complement(163859..165205) /locus_tag="Rpic12D_3607" /inference="protein motif:PFAM:PF02321" /note="PFAM: outer membrane efflux protein; KEGG: rso:RS00407 putative outer membrane cation efflux system protein" /codon_start=1 /transl_table=11 /product="outer membrane efflux protein" /protein_id="YP_002983539.1" /db_xref="GI:241665180" /db_xref="InterPro:IPR003423" /db_xref="GeneID:8021294" /translation="MLSNQDAATPRPAAGARASRRAVLFAVLAAMAVHTNAAPPVPSP RGAQTATARADEALPQPRYTLPQLLELARANHPALAASQAQVQAAQAGTATARAWPNP EVEAMAGRQRARMPGAAEGRTNSVSITQKLDLPWQRAARTQAADAAYEASQATARSQA RDVEADLKLRFYDVVRREAEQRNAREDVTLVEQIRRGVAVRVETGEAPRYELIRGDAE LLNAQRNEQAAALRVQQALAELRRAVGADLPLTFDVDAGTETPSVAHLPPLADLVSTV VATHPELEADRAAVREAEARLAHERSQRWPSLALRGSVDRQPDLQDSRVGLVMSIPLF DRREGPVGEAVAARERARALLRDRELRVRQAVESAYRQYEIAESQVSALESGVIKQAE SALRVAEAAYRHGERGILDYLDAQRVFRQARNDLIAARADLRTAAVELDRLRPEAQ" sig_peptide complement(163859..163972) /locus_tag="Rpic12D_3607" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.899) with cleavage site probability 0.888 at residue 38" gene complement(165319..165846) /locus_tag="Rpic12D_3608" /db_xref="GeneID:8021295" CDS complement(165319..165846) /locus_tag="Rpic12D_3608" /inference="similar to AA sequence:KEGG:RS00406" /note="KEGG: rso:RS00406 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983540.1" /db_xref="GI:241665181" /db_xref="GeneID:8021295" /translation="MSVTSFLSSPPTLARANTRGVRSRLRSVRWLVSVWCLLFTVSVF SATHFPDGQAADEALEAVDAIMDDAFDAAQPVTVSNPRFERAVNAVLGKAAKASSQCF NIQHWVAQAQDAPDAPPTSAASPDHPSDAPELWLPPPPMALMPGLRVARVRVSLPPFQ AGPTPAPMLRPPARV" sig_peptide complement(165319..165456) /locus_tag="Rpic12D_3608" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.727) with cleavage site probability 0.553 at residue 46" gene complement(165898..167394) /locus_tag="Rpic12D_3609" /db_xref="GeneID:8021296" CDS complement(165898..167394) /locus_tag="Rpic12D_3609" /inference="protein motif:PFAM:PF02518" /note="PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rso:RS00403 transmembrane sensor histidine kinase transcription regulator protein" /codon_start=1 /transl_table=11 /product="histidine kinase" /protein_id="YP_002983541.1" /db_xref="GI:241665182" /db_xref="InterPro:IPR003594" /db_xref="InterPro:IPR003660" /db_xref="InterPro:IPR003661" /db_xref="InterPro:IPR004358" /db_xref="InterPro:IPR005467" /db_xref="GeneID:8021296" /translation="MKLAVPAILRVRSLSFRLYVLILLALVLMLLVQLVIAHLEISRT NSRQVVSDLRMSAQAYADLTTLNMDDVPRREEFLRRLTNIKLGLSLPNILPGEFRYVL CDRAGNVVTAFPGAPTMPCGKVQGAVVEVMLEGKPWRSYTVESIDGKITATVAQPLSA YERAIRDLFQEVAIALAILASALMVMVGWAAHQGLKPLRTLTRQVESRDSADLDPVQS VEHAELKPLVDALNGLFARVRRGIEADRRFFADAAHELRTPLAAIQAQAYVVSHSDSE DDRSTALREFDRGISRATQSLAKLLAIARLDARRVEAQLAQGALSDLAGCARSGVIQQ ASRAERRNITLSYEGASQAWVAVSHEDAATLVENVLDNAVRETPEGGEVRVAVRRIER GGPGGAPMVELRVEDTGPGIPPDERERVFERFYRPRESQSQGSGLGLAIVRRIVELGN GSVAIEDGLAHAHGRGCAIVIRLPALDSTPEPIEPDDAPPGMTDSPAQ" sig_peptide complement(165898..166011) /locus_tag="Rpic12D_3609" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.983) with cleavage site probability 0.952 at residue 38" gene complement(167391..168056) /locus_tag="Rpic12D_3610" /db_xref="GeneID:8021297" CDS complement(167391..168056) /locus_tag="Rpic12D_3610" /inference="protein motif:PFAM:PF00072" /note="PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: rso:RS00402 putative two component response regulator transcription regulator protein" /codon_start=1 /transl_table=11 /product="two component transcriptional regulator, winged helix family" /protein_id="YP_002983542.1" /db_xref="GI:241665183" /db_xref="InterPro:IPR001789" /db_xref="InterPro:IPR001867" /db_xref="GeneID:8021297" /translation="MNAILLIEDDLPLGTALARALRQAGYNATWVRRLVDAQKWITTN TFEAIVLDLGLPDGEGHVFLEELRAAHRDVPVIIASARDALSERLKGLDAGADDFLVK PFPVDELIARLRAVLRRHAGQSTNQWSVGNLVVEPSQKRVTQDGQVIELTPREYQLLL ELVRRAHRWVPRETLMDALYREGDSVSANALEVVIHHLRRKLGNETIQTIRGVGYMIG GNR" gene 168644..169660 /locus_tag="Rpic12D_3611" /db_xref="GeneID:8021298" CDS 168644..169660 /locus_tag="Rpic12D_3611" /inference="protein motif:TFAM:TIGR00254" /note="KEGG: rso:RS00398 hypothetical protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein" /codon_start=1 /transl_table=11 /product="diguanylate cyclase" /protein_id="YP_002983543.1" /db_xref="GI:241665184" /db_xref="InterPro:IPR000160" /db_xref="GeneID:8021298" /translation="MILALSKCGVLGYAFAILLGWATGMLQTLTPLVAALGVMLVIVL TAQRQRHTGLWAPLALAHLLTEEVAIVLFGHQAGLAWVLPAFYLMPLATSPAWLTRRD FVIAMMLCATGPLVAIFTASAPKADIHKAWLGLLLYQPICIAAAAVIHHYLLRAMARH FAAERSLADRANTDHLTGMLARQRFFELGGFAVERARHHAEPLCALYLDVDHFKTIND TWGHAAGDEALVALSEALARVLRPKDLFGRLGGDEFAVLLPGCGLDDTLAVVDRIKAA VAASESPVGPLTISVGAAPLRRGQDLARLLADADVGLMEAKRQGRNRVCVPSDLLHSP ELAQ" gene 169714..170838 /locus_tag="Rpic12D_3612" /db_xref="GeneID:8021299" CDS 169714..170838 /locus_tag="Rpic12D_3612" /inference="protein motif:PFAM:PF00924" /note="PFAM: MscS Mechanosensitive ion channel; KEGG: rso:RS00392 hypothetical protein" /codon_start=1 /transl_table=11 /product="MscS Mechanosensitive ion channel" /protein_id="YP_002983544.1" /db_xref="GI:241665185" /db_xref="InterPro:IPR006685" /db_xref="GeneID:8021299" /translation="MEWLNAHTFLRVPARDWAAAALTVVAAYALLSSILRLICNRLEA HARDTGHRFDALTAAVLRDTHPLFIGLAALLAGSYFIDLPNRIANKLDHVWFVIIGFQ IALWLNRGVKLWARERLSAQSNATRNPVITSMVAWVLRFALWSMLMLGILANVGVNIT AFVASLGVGGVAVALAVQNVLSDLFASLAIGLDKPFEIGDFIVVESIAGTVQHVGLKT TRIRSLSGEEIVTSNTALLKSTIHNYKRMSERRIVFTFGVTYDARAAQLQKIPEIVRR AVEAAGNTRFDRAHFKEFGENALNFEVVYFVTDPDFNLYMDIQQRINLSILEGLENLG TAFALPTRTIQLVRRDGEPVEPEDLGGHAASGGAPRMRTR" gene complement(170835..171719) /locus_tag="Rpic12D_3613" /db_xref="GeneID:8021300" CDS complement(170835..171719) /locus_tag="Rpic12D_3613" /inference="similar to AA sequence:KEGG:RS05802" /note="KEGG: rso:RS05802 putative transmembrane protein" /codon_start=1 /transl_table=11 /product="putative transmembrane protein" /protein_id="YP_002983545.1" /db_xref="GI:241665186" /db_xref="GeneID:8021300" /translation="MHRVRAMTAALLVSGASSCTLGAEPVGTLPAGPVPLYGVTVDAV DDVPAVVDALAHLSRIPTVRVVFDEGMRAADYAAPVAAIRRVAYVMGELADSSTLRQY SVRQIRERADAYVGALGSNVDVWEIGNEINGEWTGRPRDVVDKTVAAYDVVTQHGGRT ALTLYYNEGCAEEPSHAMFRWTESRVPASLRNGVDYVFISFYEDDCRVPSPDWNVVFG RLGRLFPHAVLGFGEVGTRHAARKAALIAHYYGLTISHPRFAGGYFWWYFRQDMVPRS RPLWRNIDAAFEAMPVKR" sig_peptide complement(170835..170903) /locus_tag="Rpic12D_3613" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.734 at residue 23" gene complement(171722..173440) /locus_tag="Rpic12D_3614" /db_xref="GeneID:8021301" CDS complement(171722..173440) /locus_tag="Rpic12D_3614" /inference="similar to AA sequence:KEGG:RS00391" /note="KEGG: rso:RS00391 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983546.1" /db_xref="GI:241665187" /db_xref="GeneID:8021301" /translation="MKTLLGKFLCVLVFAGSLLGVSVGGTAQTSACTIGIGPVCVTVG ATASAQTTPAKMLVLYDAPPNDQYTNLGKAYAIMLYNLLAHFNTTITLLPVQNYTAGM TEQYAATFYMGSYYNNPIPAAFLSDVTTTQKTVVWFKYNLWELAWNTAYPFTSRYGIN FVGLRGLNAAPSASAPNPGFFDTVSYKNLTMTKYYAYNATTGAISADPDIGVTSVADA TKATSLVTITNSVTQETAPYVMRSGNFWYFADMPFSYIGPRDRYLAMCDLLHDILGTN QATLHRAMVRLEDVNATTTVSSMKTLTDYLYSKKIPFSIATIPLYTDPNGVYNGGVAQ TIHLVNATGLKQALNYAQNRGGRVLMHGYTHQYSNIPNLINAVSANDFEFWLATENRP VNEDSTQWAAGRLSAGLLEFQLNGYFPFAWEAPHYQSSPLSIKAVPQYFKTTYQRVVY YTSDNPQTLNSTTAGHDFSVGQFFPYIIQKDYYNQRVLPENLGNVEYNICNIDPSSCL TYTAQDILTNANYALAVRDGFASFFFHPFWLEPDLGTPGFTDFQTIISGITSLGFTWA DASKVQ" sig_peptide complement(171722..171805) /locus_tag="Rpic12D_3614" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.703 at residue 28" gene complement(173455..173904) /locus_tag="Rpic12D_3615" /db_xref="GeneID:8021302" CDS complement(173455..173904) /locus_tag="Rpic12D_3615" /inference="similar to AA sequence:KEGG:RS00390" /note="KEGG: rso:RS00390 putative signal peptide protein" /codon_start=1 /transl_table=11 /product="putative signal peptide protein" /protein_id="YP_002983547.1" /db_xref="GI:241665188" /db_xref="GeneID:8021302" /translation="MKAKRIGGGVLLASALVAGWLIVAPPWAGNAGAPAVVVGASQLR SPGSDADPKPTASASQGTVKVAQPVQPAVLAMATPKAVTGGPRAYGYGVMDENGQVVP PPRPAVITEVRPGMPETEVAGTERGHDRGPNFNLGLYRQADGSVYRP" sig_peptide complement(173455..173541) /locus_tag="Rpic12D_3615" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.998) with cleavage site probability 0.863 at residue 29" gene complement(173914..175176) /locus_tag="Rpic12D_3616" /db_xref="GeneID:8021303" CDS complement(173914..175176) /locus_tag="Rpic12D_3616" /EC_number="5.1.3.14" /inference="protein motif:TFAM:TIGR00236" /note="KEGG: rso:RSp0510 UDP-N-acetylglucosamine 2-epimerase protein; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase" /codon_start=1 /transl_table=11 /product="UDP-N-acetylglucosamine 2-epimerase" /protein_id="YP_002983548.1" /db_xref="GI:241665189" /db_xref="InterPro:IPR003331" /db_xref="GeneID:8021303" /translation="MTGKILTVFGTRPEAIKMAPLVKALQAEAGLTSAVCVSAQHRQM LDQVLELFGIVPEFDLNLMRPGQTLSDITSSVLGGIDGVLDVYQPDAVLVHGDTTTTL SASLAAFYRRIPVGHVEAGLRTGNIWSPWPEELNRRVTDAVTTWHFAPTAESRQNLLD EGVDPDQVTLTGNTVIDALLAVKARLDDDTALSAEMAARYPFLDPRRRMILVTGHRRE NFGEPFENFCVALRVLAARHPDVQIVYPVHLNPNVQQPVNAILSGHDNVYLIAPQDYL PFVYLMARAYLIVTDSGGIQEEAPALGKPVLVTRDTTERPEAVASGTARVVGTSTQRI VDEAELLLGNTAEYERMAHAHNPYGDGQACRRIVAALKTALGAQPQSAVRGPQLVRKP ASEAEIIHLEAARAIAQGPSSVHQRSRR" gene complement(175424..177148) /locus_tag="Rpic12D_3617" /db_xref="GeneID:8021304" CDS complement(175424..177148) /locus_tag="Rpic12D_3617" /inference="similar to AA sequence:KEGG:RS00388" /note="KEGG: rso:RS00388 putative signal peptide protein" /codon_start=1 /transl_table=11 /product="putative signal peptide protein" /protein_id="YP_002983549.1" /db_xref="GI:241665190" /db_xref="InterPro:IPR013026" /db_xref="GeneID:8021304" /translation="MKPKREQRFTLRRLRWPIAAAVWALGHGASVAQPLQPDAYFRAD RAYHAIEANQLDDAEAATRAALAVQPDSLQLNLLLLDVLTRKGQLDAARAQADALVRK YPDEPRVYAQHGFLAQKANDPAVAEQDFARAVQSTDWTPQEQHNLHLAWSDSAYSAKH PQAALDALSGMQDQPDADVQLRLAQSRLQLGDRDGAARAATLAGEHTTDPARQRYAQA LLAQASAPQARGEATSPDDPRVVGQRALNEAYGHLRARDDRAALAAFQRGFATGQGNW SHYADAAYAAKRLGDNPTAIQLFRESLDHADADAKGDSGGNDDDRLPADRRFGYRREV EQMQRTFGMVLSGAYQTSAFGLPNTVSVAQGGAEVYWQPPGIGYRDGSIFQLFARGYD SLYDRNGITGLPTAQGSVGARYKPLKDMNLVFTAERLIRIGSLTSNDTLLRIGFSTDQ GIDLQVTKPRWQTWQVYAEGAYFVNQGRMIVSTEARYGHTWRVSSISDHLTVYPHVVL AGDHDNKAAGEQLALGVGPGINLRYWFRESHYAAPASWLDLTVQYRLPLTHADRAKGI VARAILWF" sig_peptide complement(175424..175522) /locus_tag="Rpic12D_3617" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.969 at residue 33" gene complement(177145..179256) /gene="nfrB" /locus_tag="Rpic12D_3618" /db_xref="GeneID:8021305" CDS complement(177145..179256) /gene="nfrB" /locus_tag="Rpic12D_3618" /inference="protein motif:PFAM:PF05157" /note="PFAM: General secretory system II protein E domain protein; KEGG: rso:RSp0508 bacteriophage N4 adsorption protein B" /codon_start=1 /transl_table=11 /product="General secretory system II protein E domain protein" /protein_id="YP_002983550.1" /db_xref="GI:241665191" /db_xref="InterPro:IPR007831" /db_xref="GeneID:8021305" /translation="MSDLPWDIYVALLNTLTVATTLVILISTADDFFLDAFYWVRELW LWPQRGRTPVTISAQALRDREEQWLAIMVPAWKEYDVIAKMVENTLATMEYTRFIIFA GAYRNDAETTTEVERMVRRYPGRVVRAAVTHDGPTCKADCLNTIIQTIIRYEAGHGIR FAGVIMHDCEDVIHPLELKYFNYFISDQDLVQLPVLSLERKWYEWVAGTYMDDFSETH QKDLVARQALTGTVPGAGVALCYSRRAIEAVMKVRGDAPFNTSTLTEDYDFSFRLREL GMREAFVHFPVCENTAPVADGTGRQPTHWWTNRRREARPQLLATREYFPSTFRTAYRQ RARWVLGIAFQGWLQMGWKGNLITKYMFFRDRKGVLTALFSILAYALSLNYLLVAVLL DKGWVTASEGAFVVGTIWMQDLLAINATLLINRLAQRVYFVGRLNGPLQAVLCLPRLV VNNFINFFSVCRAWKIFLIYCFTGKPIAWDKTQHTYLSNDALGRTRCKLGETLLKWEV ITQEQLDAALAIQQQTGRRLGQVLVQQGLVTPDTLADALAEQADLPRVSLTNVVLGAL ADCLPRDLAVRHHVVPFSIGEDGSLNIAVSELPDGEALQELARAAGRKVACFMACDHE MSAELAQMADPHRRATVVFGPSAHSAILAVESMTSAGPDTVPGTAPAPEVSTIPPMPV PPDLTPGPDARPNPSVAGGVA" gene complement(179980..181806) /locus_tag="Rpic12D_3619" /db_xref="GeneID:8021306" CDS complement(179980..181806) /locus_tag="Rpic12D_3619" /inference="protein motif:PFAM:PF00015" /note="PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: rso:RSp0507 methyl-accepting chemotaxis I" /codon_start=1 /transl_table=11 /product="methyl-accepting chemotaxis sensory transducer" /protein_id="YP_002983551.1" /db_xref="GI:241665192" /db_xref="InterPro:IPR003660" /db_xref="InterPro:IPR004089" /db_xref="InterPro:IPR004090" /db_xref="GeneID:8021306" /translation="MLNRLSIRFRLNAALSLLAVLLLTTGIVGVIGMRASDANINEIY TNQLVSASLLGKAQLNAAIVRTTLDRAVFHPDAADVPAIIDKANGYRAKSDDAWKQYK ALPMSADESRLAAEVEARRNALFRDGIEPLMSALRARDAAAADKVVMNTIPPLSVALT SAADALDRSQAEQAKAAYDGASARSHAFLLLIVSAIAVGIAAALGCAFGLHRAISVPL SRMLGHFGEISRGNLTEHITVTSHDEMGALTRGLIDMQRGLIRTIETMRGGSESIASA TKQIAAGNMDLSQRTEEQASSLEETASSMEELTSIVKQNADNARQASQLAGNASDIAV KGGEVVGRVIETMSGINDSSKKIADIIGVIEGIAFQTNILALNAAVEAARAGEQGRGF AVVAGEVRSLAQRSATAAKEIKELINDSVGRVENGSTLVTEAGAVIDEVVVAVKRVTD IMGEISAASDEQSAGIEQVNQAVTQMDEVTQQNAALVEEAAAAAQSLEEQAGVLRETV ASFRLPPAGTHAAPVASAAAPGAASASAAKPLQRKPAAATTSTGRAVRKRVAAPPALK MPAQPRTEPAVAPAVAVSAVVPRSGKLAPATTSNDADDWEQF" sig_peptide complement(179980..180096) /locus_tag="Rpic12D_3619" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.998) with cleavage site probability 0.862 at residue 39" gene complement(181896..182606) /locus_tag="Rpic12D_3620" /db_xref="GeneID:8021307" CDS complement(181896..182606) /locus_tag="Rpic12D_3620" /inference="protein motif:PFAM:PF05433" /note="PFAM: 17 kDa surface antigen; KEGG: rso:RS00385 putative glycin-rich transmembrane protein" /codon_start=1 /transl_table=11 /product="17 kDa surface antigen" /protein_id="YP_002983552.1" /db_xref="GI:241665193" /db_xref="InterPro:IPR008816" /db_xref="GeneID:8021307" /translation="MQATNRPARAGRAGRWVAVAALAAVTAGLTGCMTAPYPGYGAGY GAGYAAGSSAYGNSDGSTTYSTTPYANGYDSRYNNGYGSYDQNAPQPYPQQPYPSQQP APAYSQPNYSPYPANGAPAYQTPADNRYGVVERIDVVPVRGQPTGVGAVLGGVVGGLL GHQVGGGRGNTVATIGGAVAGAMAGNAVEGNTVAGQTYQVTLRLNDNSRVTLTQNNPN GLRPGDRARIENNTAVPY" sig_peptide complement(181896..182000) /locus_tag="Rpic12D_3620" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.733) with cleavage site probability 0.646 at residue 35" gene 182862..183794 /locus_tag="Rpic12D_3621" /db_xref="GeneID:8021308" CDS 182862..183794 /locus_tag="Rpic12D_3621" /inference="protein motif:PFAM:PF02826" /note="PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: rso:RSp0505 2-hydroxyacid dehydrogenase" /codon_start=1 /transl_table=11 /product="D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding" /protein_id="YP_002983553.1" /db_xref="GI:241665194" /db_xref="InterPro:IPR006139" /db_xref="InterPro:IPR006140" /db_xref="GeneID:8021308" /translation="MQPTLLILIAMTPDNVAQIAQHFHVIHAPTRAERDAAIAHEGHA VRIVLTNGSTGLTAAEIAAMPRLELACALGAGYENIDVAAARARGVAVANGAGTNDAC VADHAIGLLLATVRGIPKLDRATRHGIWRDDLPLQPGVWGKRLGIVGLGTIGLQIARR AAGFDMQIGYHNRKPREGVPYRYFDALKDMAEWADFLIVATPGGAQTRHLVNQTILEA LGPGGYVVNIARGSVVDTAALEAAIRAGKLGGAGLDVYESEPAPPAGLLDLEQVVLTP HIAGWSPESVQATVDRFLENARGHLAGTGVVSPV" gene complement(183836..185092) /locus_tag="Rpic12D_3622" /db_xref="GeneID:8021309" CDS complement(183836..185092) /locus_tag="Rpic12D_3622" /inference="protein motif:PFAM:PF01094" /note="PFAM: Extracellular ligand-binding receptor; KEGG: rso:RSc1750 Leu/Ile/Val-binding precursor signal peptide protein" /codon_start=1 /transl_table=11 /product="Extracellular ligand-binding receptor" /protein_id="YP_002983554.1" /db_xref="GI:241665195" /db_xref="InterPro:IPR001828" /db_xref="GeneID:8021309" /translation="MKAFRVALRAAAVAGAVAGAFCVGNVHAETVKIAWIDPLSGLMG ALGQNQLRSWQYAAELANQQNWSGNGTKFEVVGFDNKVSPQESLTILRQITDQGIRYI AQGDGSSVGMALQDAVAKYNDRNPGKEIVYLNYAAVDPDMTNSKCNYWHFRLDANSDM KMEALTSYLAKDQNIKKVYLLNQNYSFGHQVARAAKEYLKRKRPDIQVVGEDLHPLAQ VKDFSPYVAKIRASGADTVITGNWGSDLALLIRAAKDAGLNTNFYTYYAGTTGVPTAM GASGADRVKVISYFAPNDGNPKTSAVLDGFKKKYNDDFFNADVYTGIAFLAKAVKTTG SADPAKVAKAMEGMTVESLNGPVEMRKTDHQAQQTLYVTTWVKADGKKIKYDQENTGY GWRTDVTLEPHLGAQPTSCQMKRPAS" sig_peptide complement(183836..183922) /locus_tag="Rpic12D_3622" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 1.000 at residue 29" gene 185345..185998 /locus_tag="Rpic12D_3623" /db_xref="GeneID:8021310" CDS 185345..185998 /locus_tag="Rpic12D_3623" /inference="protein motif:PFAM:PF00440" /note="PFAM: regulatory protein TetR; KEGG: dar:Daro_3251 regulatory protein, TetR" /codon_start=1 /transl_table=11 /product="transcriptional regulator, TetR family" /protein_id="YP_002983555.1" /db_xref="GI:241665196" /db_xref="InterPro:IPR001647" /db_xref="GeneID:8021310" /translation="MPSPLVDEHKGPVDAETLSAAAPRAQLTPNDWVRAATDLLVTKS IDAVRVDVLAKQLDVTRGSFYWHFKNRDDLLNQVLQDWSERTRVGPKLEQQNPSVQGL VRDLLALPFRGRSARRTAMIEFAIRAWARRDPMAQEAVEAVDEHRMDYYIQHFQAIGF ARKDAKVRAFMLYAYQLSEASLWHQGSKPDKDARRRFFEDTLLAGAPADGSKRTAQE" gene 186040..187833 /locus_tag="Rpic12D_3624" /db_xref="GeneID:8021311" CDS 186040..187833 /locus_tag="Rpic12D_3624" /inference="protein motif:PFAM:PF07690" /note="PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: bpy:Bphyt_3530 major facilitator superfamily MFS_1" /codon_start=1 /transl_table=11 /product="major facilitator superfamily MFS_1" /protein_id="YP_002983556.1" /db_xref="GI:241665197" /db_xref="InterPro:IPR005828" /db_xref="InterPro:IPR007114" /db_xref="InterPro:IPR011701" /db_xref="GeneID:8021311" /translation="MPESPAFHTSDLPSRLDRLPWSRFHTRVVVALGITWLLDGLEVT LAGAVAGALKQSPALQLTNAQIGMASSAYLVGAVLGALVFGWLTDRLGRRKLFFITLG VYICATLATAFSWNFASLVLFRVLTGAGIGGEYAAINSTIQELTPARVRGWTDLAING TFWIGAALGAGASLWLLDPAHVSADTGWRLCFLIGAALGLIILVMRFWIPESPRWLLT RGRHEEARAIVRDIEEEITACGHRFDTAPLATLRLRHRGHPGLADVARVLFVQHRRRA LVGLALMAAQAFFYNAIFFTYALVLTDFYDVPATRVGTYLLPFALGNFLGPLLLGRLF DRLGRRTMIAATYAISGVLLLASGALFKAGVLDGTTQTLAWTVVFFFASAAASSAYLT VSETFPLEVRALAIALFYAVGTGLGGVAGPALFGWLIDTHSRGALFGGYAFGAVLMLL AAAVQARWGTAAERKPLEHVAAPLRWMTARLDQRQVRATCVAYTARCHFLFCRRHSCL TRRTTTRTSSPRSCAASCPASRCTKTSTPSPSWTSCRRPTAMFSCCPRRARHCCSTCP TKPHRPPSAPRASWPAPCATRSRRRALPSSS" gene 187836..187991 /locus_tag="Rpic12D_3625" /pseudo /db_xref="GeneID:8021312" gene complement(188165..188527) /locus_tag="Rpic12D_3626" /db_xref="GeneID:8021313" CDS complement(188165..188527) /locus_tag="Rpic12D_3626" /inference="similar to AA sequence:KEGG:RALTA_A0217" /note="KEGG: cti:RALTA_A0217 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983557.1" /db_xref="GI:241665198" /db_xref="InterPro:IPR013838" /db_xref="GeneID:8021313" /translation="MREIRIFELDRPGVPVSWRSARAQTIAAQAGLLWVTQEHQLQDV WLRPGQSIDVPAGVRFWLSGEPAAGMPARFAVTEDINAPRRLVRFAGLLLATAVRQLL RDDGQDAARTPSALRIGT" gene complement(188702..190225) /locus_tag="Rpic12D_3627" /db_xref="GeneID:8021314" CDS complement(188702..190225) /locus_tag="Rpic12D_3627" /inference="protein motif:PFAM:PF01546" /note="PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: rso:RS00365 hypothetical protein" /codon_start=1 /transl_table=11 /product="peptidase M20" /protein_id="YP_002983558.1" /db_xref="GI:241665199" /db_xref="InterPro:IPR001261" /db_xref="InterPro:IPR002933" /db_xref="InterPro:IPR011650" /db_xref="GeneID:8021314" /translation="MKASFMRRSGMAGRVVGRLLLAVVVILLALAAAVAVNTWRHRSR QIDVPAVTPVAVDGPAAAAHLAEAVRARTVSSATDAQLNADQFRQLHAMLEARYPKAH AVMQREQVGDFALLYTWKGSDPSLPPIMLMAHQDVVPIAPGTEGDWTEPPFDGVVKDG FVWGRGAWDDKGNLISQMEAIELLAASGFKPRRTIHLAFGADEEVGGERGAKQIAALL KSRGERLDFVIDEGLLITEGVLPGLAKPAALIGVAEKGFLSVQLKVGATPGHSSMPPP PGQSAIAMMSAALKRLDDDQLPAGIRGVAQEMFETLAPEMQGFSRVALSNLWLFGPMV QKQLEASGSSNAMLRTTTALTIVQAGNKDNVLPGRAQATVNFRLLPGDTIASVTAHVQ DAAKAAAPKGKFELSTLPGMSEASPVSPTQSASYQLINKTVRELFPGTVVAPGLMIGA TDSRHMIGIADHVYRFSPVRAKPEDLPRFHGTNERITEANLVELIRFYHRLVQQAAG" sig_peptide complement(188702..188809) /locus_tag="Rpic12D_3627" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.998) with cleavage site probability 0.699 at residue 36" gene 190405..191823 /locus_tag="Rpic12D_3628" /db_xref="GeneID:8021315" CDS 190405..191823 /locus_tag="Rpic12D_3628" /inference="protein motif:PFAM:PF00392" /note="PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: cti:RALTA_A0216 putative transcriptional regulator, GntR family; C-term aminotransferase motif" /codon_start=1 /transl_table=11 /product="transcriptional regulator, GntR family with aminotransferase domain protein" /protein_id="YP_002983559.1" /db_xref="GI:241665200" /db_xref="InterPro:IPR000524" /db_xref="InterPro:IPR004839" /db_xref="GeneID:8021315" /translation="MKLQIDPATRVPISDQIVAGVQAWIGDNDVRPGAKLPSIRQLAA EYGISRFPVIEAYDRLVSLGLLDSRHGSGFYVAESGLTGRDGRGWTDPRRAEAESKHI FEQFSYPDGMLKLGGGFVPADWRDMDGLTQAIRQVSRTDTHAVIDYAPPLGNPALRQQ IMMRARQLGVQAELPNVMITAGTSQAIDLVIRHLLKPGDTVFVEDPGYYTVFGLLRLH GVKLVGIPRKADGPDVDVAEAMLREHRPKLFIINSVLQNPTGSTLSPPVAFRLLELAR RHGFVFLEDDIFADLQADPTARLATLDQMEHVIYVGGFSKTVSASLPVGYLIAKRELV HDLTNVKMLTSVGGSRFAEAVVTTLLERGAYRKYVERLRQRIGDSVIASLDVLSDAGW EVFHHPPGGNFLWARVPHVEDSRDLAAVAEKHGVTLAPGHYFRPNMEVSPWVRINSAY VNEPRALAFLKEAGRRPARKRA" gene 191906..192361 /locus_tag="Rpic12D_3629" /db_xref="GeneID:8021316" CDS 191906..192361 /locus_tag="Rpic12D_3629" /inference="ab initio prediction:Prodigal:1.4" /note="KEGG: rso:RS00364 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983560.1" /db_xref="GI:241665201" /db_xref="GeneID:8021316" /translation="MHNAEHNAAQPQPDEPVTRQPEQAKLTEEPPDTPHGDPVVRAAR RIRSVDAAGTEASDNTIDTDGKGLEAAKDRSHWHDNVIYSNASLVNTHPEPDPEAPIA GVDSRRSQGQPTIATVAGHHVVHRGVVNETVRNGTRAAQRFALEDDESV" gene complement(192466..193245) /locus_tag="Rpic12D_3630" /db_xref="GeneID:8021317" CDS complement(192466..193245) /locus_tag="Rpic12D_3630" /inference="protein motif:PFAM:PF00378" /note="PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bja:bll7955 enoyl-CoA hydratase/isomerase" /codon_start=1 /transl_table=11 /product="Enoyl-CoA hydratase/isomerase" /protein_id="YP_002983561.1" /db_xref="GI:241665202" /db_xref="InterPro:IPR001753" /db_xref="GeneID:8021317" /translation="MSDHIHSRHANGVLTLTLARADKKNAITDAMYGALADALDAAER DNAVRVVLLRAEGDMFSAGNDIGEFASIAMTGGKGGGERNVIRFLHALARATRPLVAA VQGRAVGIGTTMLLHCDFVLLADNAQLSTPFVNLALVPEAASSLLMPARLGHVRAFEM FALGDAVSAQSALMWGLANRVVPLDRLGEEAQAIAQRLARQPLGALTETKRLMRDAEL LKQQMDAESACFARRLQSPEAHEAFRAFVDRRPPDFNAVAH" gene complement(193242..193676) /locus_tag="Rpic12D_3631" /db_xref="GeneID:8021318" CDS complement(193242..193676) /locus_tag="Rpic12D_3631" /inference="protein motif:PFAM:PF01047" /note="PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: reu:Reut_B4527 MarR family transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, MarR family" /protein_id="YP_002983562.1" /db_xref="GI:241665203" /db_xref="InterPro:IPR000835" /db_xref="GeneID:8021318" /translation="MTAPERRLVYLINVGQRRLQRWIQTRTGEGVTAAQSGLLFFLEK NDGALMREAGAALDLGPSAMSGLVDRTADAGLIERRSDARDGRAWQLWLTDAGRAALV QTRAGLTELNTRLTDGFTDAEIDVVARWLSSLQTKFPNGDEP" gene complement(193673..194560) /locus_tag="Rpic12D_3632" /db_xref="GeneID:8021319" CDS complement(193673..194560) /locus_tag="Rpic12D_3632" /inference="similar to AA sequence:KEGG:BamMC406_4327" /note="KEGG: bac:BamMC406_4327 alpha/beta hydrolase-like protein" /codon_start=1 /transl_table=11 /product="alpha/beta hydrolase-like protein" /protein_id="YP_002983563.1" /db_xref="GI:241665204" /db_xref="GeneID:8021319" /translation="MNSVSRTIPATDGYPLGATVRAASGVPRGVVVVHPATGVPQRIY QAFAQFLADCGFHTITYDYRGIGASRPKSLRRFAARMRDWALLDAEGVMRWAKARYPG LPQLAVGHSVGGHAIGLCSADWDVAGVVQVASHTGNSRFIRQRGERWRVELILRGVGP LMARLIGYVPGKRMGLGEDLPGGVAIEWGAWAGMQRYFFDDPTLGAIERFNRVTHPVL VYGFDDDPWATPAAINALTMHFTSTWVERRQIAPAQAGGPVGHMGFFRPQFASTLWPG LAGWLHERTAATRAEAEAA" gene 194677..195033 /locus_tag="Rpic12D_3633" /db_xref="GeneID:8021320" CDS 194677..195033 /locus_tag="Rpic12D_3633" /inference="protein motif:PFAM:PF01022" /note="PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: rso:RSc1960 putative transcriptional regulatory DNA-binding transcription regulator protein" /codon_start=1 /transl_table=11 /product="transcriptional regulator, ArsR family" /protein_id="YP_002983564.1" /db_xref="GI:241665205" /db_xref="InterPro:IPR001845" /db_xref="GeneID:8021320" /translation="MLNHDVSLDLAFQALADANRRAMLVQLVRGPASVSALAQPLGIS LPAVMQHLAVLESSGLVRSEKVGRVRTCRIEPQALSLAEQWINQRRLEWEQHFDRLGA YLDTLKIQGDPHDDDR" gene 195017..195970 /locus_tag="Rpic12D_3634" /db_xref="GeneID:8021321" CDS 195017..195970 /locus_tag="Rpic12D_3634" /inference="protein motif:PFAM:PF08327" /note="PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: rso:RSc1959 hypothetical protein" /codon_start=1 /transl_table=11 /product="Activator of Hsp90 ATPase 1 family protein" /protein_id="YP_002983565.1" /db_xref="GI:241665206" /db_xref="InterPro:IPR013538" /db_xref="GeneID:8021321" /translation="MTTTVDRPAGTTLHPLVMSRTFPVSRDWVFQAWSTAEHIKRWFC PMHFTVPDATVEFRVGGRFDVCMRSPEGQDHWTRGHFVEIVPNARLVIDMNVVDGDNR PLMNAHTVVTFAEEPGGCTRMEVSQTHTPLAPLAEQMIKGAAEGWKQTLDRLEREAAR MPVPDGVARSVVHATFTVERTYDAPRSRVFRALTDPAAKAKWFAGGSGYTLIVREMDA RPGGREIVKGRWDSGVVSSFEATYHDVIPDERVVYSYVMHLDDRKISASLATLELHAA GNGTHLVMTEQGAFLDGYDDAGSRERGTQFLLDALGNALKD" gene complement(196107..197228) /locus_tag="Rpic12D_3635" /db_xref="GeneID:8021322" CDS complement(196107..197228) /locus_tag="Rpic12D_3635" /EC_number="2.3.1.41" /inference="protein motif:PRIAM:2.3.1.41" /note="PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: rso:RS04707 3-oxoacyl-(acyl carrier protein) synthase III" /codon_start=1 /transl_table=11 /product="Beta-ketoacyl-acyl-carrier-protein synthase I" /protein_id="YP_002983566.1" /db_xref="GI:241665207" /db_xref="InterPro:IPR013747" /db_xref="InterPro:IPR013751" /db_xref="InterPro:IPR014030" /db_xref="GeneID:8021322" /translation="MHDVVISGTGLWVAPEVITNEELVASFNAYAQRYNVQHADAIAA GELVPLQESSAEFIEKASGIRQRYVVEKSGVLDPTRMRPKLAPRPDDALSLQAEIGVA AARDALAAAGRDASDVDMLICATSNFQRPYPALAVEIQNGIGASGYAFDMNVACSSAT FGLEQAINAVRSGTARAALVVSPEVTSGHLDWKDRDCHFIFGDVCTAVLVERAEDTRS PDAWRVLGTKCATSFSNNIRNNAGYLSRSEDRNPDDRDQLFRQEGRKVFKEVCPMAAE HIAAHLQSLGHTPADVRRFWLHQANLAMNQLIGKRLLGHDASADEAPVILDEFANTAS AGSIIAFHRHRADLESGDVGIICSFGAGYSIGSVAVQKQ" gene 197589..198263 /locus_tag="Rpic12D_3636" /db_xref="GeneID:8021323" CDS 197589..198263 /locus_tag="Rpic12D_3636" /inference="protein motif:PFAM:PF00300" /note="PFAM: Phosphoglycerate mutase; KEGG: bur:Bcep18194_B3039 phosphoglycerate/bisphosphoglycerate mutase" /codon_start=1 /transl_table=11 /product="Phosphoglycerate mutase" /protein_id="YP_002983567.1" /db_xref="GI:241665208" /db_xref="InterPro:IPR013078" /db_xref="GeneID:8021323" /translation="MAELYLVRHGQASFGAANYDQLSARGEQQSEWLGEYFARHDVVF DRVVCGTLRRHEQTVEGILRGMGIVGATYEQHAGLNEYDFHGLFAALGDDFPELTRLA TGSMRDHYRALKQVLHLWSEDKLRGPLPETWAAFQQRVADARAAIQGGGGQRVLAISS GGPIAVTAQQVLAAPAASAIALNLQIRNSSVSQYFFNADAFHLATFNSIPHLDTPERR DHQTYG" gene 198327..199091 /locus_tag="Rpic12D_3637" /db_xref="GeneID:8021324" CDS 198327..199091 /locus_tag="Rpic12D_3637" /inference="protein motif:PFAM:PF00106" /note="PFAM: short-chain dehydrogenase/reductase SDR; KEGG: reu:Reut_C6406 short chain dehydrogenase" /codon_start=1 /transl_table=11 /product="short-chain dehydrogenase/reductase SDR" /protein_id="YP_002983568.1" /db_xref="GI:241665209" /db_xref="InterPro:IPR002198" /db_xref="InterPro:IPR002347" /db_xref="InterPro:IPR002424" /db_xref="GeneID:8021324" /translation="MSTNLFDLTGKIALVTGASRGIGEEIAKLLAEQGAHVIVSSRKL ADCQAVADSIREAGGKAEALACHVGRMEDIEATFAHIRNTHGRLNILVNNAAANPYYG HILDTDLAAFEKTVDVNIRGYFFMSVEAGKMMRAQGGGAIVNTASVNALQPGDKQGIY SITKAAVVNMTRAFAKECGPLGIRVNALLPGLTKTKFAGALFEDKATYDRWISEIPLR RHAEPREMAGTVLYLVSDAASYTNGECIVVDGGITI" gene 199107..200081 /locus_tag="Rpic12D_3638" /db_xref="GeneID:8021325" CDS 199107..200081 /locus_tag="Rpic12D_3638" /inference="protein motif:PFAM:PF00753" /note="PFAM: beta-lactamase domain protein; KEGG: reh:H16_A0853 lactamase B" /codon_start=1 /transl_table=11 /product="beta-lactamase domain protein" /protein_id="YP_002983569.1" /db_xref="GI:241665210" /db_xref="InterPro:IPR001279" /db_xref="GeneID:8021325" /translation="MHAGRIDEMRGRTRRTRHAMTATHARTKIERADFGRVSVFFGEK NGKYPDGNQVLIRGADTRAAFDTPVVSNHIGAEFDATELVVMGHVHEDHMAGLHRLPR ARVYAHEADVPALRSWEGMVDTYGLDDALAPRMLEKLQREFFYTPRPDAHGYVDGASW DLGQTQVRALHFPGHTAGHSVLLIEPEAVAFIGDIDLTGFGPYYGDACSSLHDFRRSL ARLHEIPAKVWVTSHHRGIYTDRESFLRDLAAYTAKLSEHEARLLAMLEESPKTLAQL VEQRLLYPPGYQNVWVEGAERRTILQHLAELLAQGRVLQDDQGAYRVA" gene 200194..200466 /locus_tag="Rpic12D_3639" /db_xref="GeneID:8021326" CDS 200194..200466 /locus_tag="Rpic12D_3639" /inference="similar to AA sequence:KEGG:RS00884" /note="KEGG: rso:RS00884 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983570.1" /db_xref="GI:241665211" /db_xref="GeneID:8021326" /translation="MDDLIRIENEYDRQTVAWLRERLGEQALCEVVMRMEGRGRPYAS AVCRTLGLTPPPRQRVSRARPLNRAVGEAYLAAIRGILGTGRHAAA" gene complement(200687..201919) /locus_tag="Rpic12D_3640" /db_xref="GeneID:8021327" CDS complement(200687..201919) /locus_tag="Rpic12D_3640" /inference="protein motif:PFAM:PF07690" /note="PFAM: major facilitator superfamily MFS_1; KEGG: rso:RSp0412 putative fosmidomycin resistance antibiotic resistance transmembrane protein" /codon_start=1 /transl_table=11 /product="major facilitator superfamily MFS_1" /protein_id="YP_002983571.1" /db_xref="GI:241665212" /db_xref="InterPro:IPR007114" /db_xref="InterPro:IPR011701" /db_xref="GeneID:8021327" /translation="MQTTANGPAAAPTQADKTGFGVIGAISFAHFLNDMMQSLILAIY PLLKGNFHLDFSQIGLITLTYQITASLLQPMVGLYTDKHPKPYSLSVGMGFTLVGLVL LSMAPNYGTLLLAAALVGTGSSIFHPESSRVARMASGGRHGLAQSLFQVGGNVGSAMG PLLAAAIIMPYGQHSLAWFSLAALVAIFVLYHVGGWYQRERAAGHARKAGAHAHATAR LPGRQVAFAMTLLVVLLFSKYFYLASLNSYYTFYLITKFHLSAQASQMFLFLFLFSVA VGTIVGGPIGDRVGRKIVIWVSILGVAPFTLMLPYANLFWTAVLTVIIGLVLASAFSA ILVYAQELIPGKVGMVSGLFFGFAFGLGGIGAAVLGKLADATDIYNVYHLCSLLPLIG LLTVFLPDIERKGRLHTA" gene 202356..202574 /locus_tag="Rpic12D_3641" /db_xref="GeneID:8021328" CDS 202356..202574 /locus_tag="Rpic12D_3641" /inference="ab initio prediction:Prodigal:1.4" /note="KEGG: rso:RS05307 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983572.1" /db_xref="GI:241665213" /db_xref="GeneID:8021328" /translation="MKILLTGTHCRAMGDLFYQALLDDRVVCCFVTSEAVDLTGTAMR PSPASFPRTDPRLADVSRSASYCAPLVP" gene complement(202640..203665) /locus_tag="Rpic12D_3642" /db_xref="GeneID:8021329" CDS complement(202640..203665) /locus_tag="Rpic12D_3642" /inference="similar to AA sequence:KEGG:RS00868" /note="KEGG: rso:RS00868 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983573.1" /db_xref="GI:241665214" /db_xref="GeneID:8021329" /translation="MTMHPLDPHARAIKTVSYVLVVAMILAVLWLRLLPAAIAGLLVY TLSRRLEASLRRRPVLVTHAKAIAVIGVSVVAALILAGIGLGIGRLVEHGHGLEGMLT RIADVLDNLRASLPGSVADYIPPSVTELRIRLVEMLKEHGRQVSTVGIDGLRHSVLAL IGLIVGAMVAWSDAPDPTRHKPLAAALLNRLGRLTAAFETVVFAQVKISALNTTLAAI YLLGALPVVGQHVPYSKSLILLTFVAGLIPVVGNLISNAAIVVMSVTASLELAVASLV FLVIVHKLEYFVNARIIGSRIDARAWELILALILMEALFGVGGVIAAPVLYAYMKREL TDAGLIG" gene complement(203662..204234) /locus_tag="Rpic12D_3643" /db_xref="GeneID:8021330" CDS complement(203662..204234) /locus_tag="Rpic12D_3643" /inference="protein motif:PFAM:PF07077" /note="PFAM: protein of unknown function DUF1345; KEGG: rso:RS00867 hypothetical protein" /codon_start=1 /transl_table=11 /product="protein of unknown function DUF1345" /protein_id="YP_002983574.1" /db_xref="GI:241665215" /db_xref="InterPro:IPR009781" /db_xref="GeneID:8021330" /translation="MLVPAERGWLTRTLLGWDAAVWTYLVLISGMMLRADPRRIRAVA RREDERASAVLAVVCLGVVASMVAIAFELATARSAGHAQAWHTAFAGVTVLGAWLMVP MMFTVHYAHLYYRARDELPLQFPDREIEPDYWDFLYFSFTIAVASQTADISIRSRAMR RAVLGQSLLSFFFNTSILALSINIAASLFS" gene complement(204405..204710) /locus_tag="Rpic12D_3644" /db_xref="GeneID:8021331" CDS complement(204405..204710) /locus_tag="Rpic12D_3644" /inference="similar to AA sequence:KEGG:RS00866" /note="KEGG: rso:RS00866 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983575.1" /db_xref="GI:241665216" /db_xref="GeneID:8021331" /translation="MIRSRCLTCTLWRLLLAAATATLAACATVTPGPFQITVRDTDDT VLEQFQFQAGSQDSLEIAIIGMCRVYPEATVIAEQLQTHERVQERCKRSFASMLTAP" sig_peptide complement(204405..204488) /locus_tag="Rpic12D_3644" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.745 at residue 28" gene complement(204836..205258) /locus_tag="Rpic12D_3645" /db_xref="GeneID:8021332" CDS complement(204836..205258) /locus_tag="Rpic12D_3645" /inference="similar to AA sequence:KEGG:RS00831" /note="KEGG: rso:RS00831 putative signal peptide protein" /codon_start=1 /transl_table=11 /product="putative signal peptide protein" /protein_id="YP_002983576.1" /db_xref="GI:241665217" /db_xref="GeneID:8021332" /translation="MKAQRTLIAALIALASVPALAAAKFDVYTQGAAAGQRFDVYTQG AKAGSKFDPHTEGAKAGSKFDPYTEGAKAGDKFDPYTQGALARTGKFDTYTEGAKAGS KFDPYTEGALARAGKFDPYTEGAKVGDKFNPYTDGAAV" sig_peptide complement(204836..204901) /locus_tag="Rpic12D_3645" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.989 at residue 22" gene 205671..205838 /locus_tag="Rpic12D_3646" /db_xref="GeneID:8021333" CDS 205671..205838 /locus_tag="Rpic12D_3646" /inference="similar to AA sequence:KEGG:RS00829" /note="KEGG: rso:RS00829 lipoprotein" /codon_start=1 /transl_table=11 /product="lipoprotein" /protein_id="YP_002983577.1" /db_xref="GI:241665218" /db_xref="InterPro:IPR000600" /db_xref="GeneID:8021333" /translation="MKPVLIAVSLLCAALLSGCGVAAAPCRVASAGLKMVPLVGHVAA APTDACADIID" sig_peptide 205671..205739 /locus_tag="Rpic12D_3646" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.426 at residue 23" gene complement(205849..206397) /locus_tag="Rpic12D_3647" /db_xref="GeneID:8021334" CDS complement(205849..206397) /locus_tag="Rpic12D_3647" /inference="protein motif:PFAM:PF00583" /note="PFAM: GCN5-related N-acetyltransferase; KEGG: rso:RSp0397 phosphinothricin acetyltransferase protein" /codon_start=1 /transl_table=11 /product="GCN5-related N-acetyltransferase" /protein_id="YP_002983578.1" /db_xref="GI:241665219" /db_xref="InterPro:IPR000182" /db_xref="GeneID:8021334" /translation="MSSAPISVDSHSAPGTQTIDVRPATLADLPAIVAIYAHHVRTGT ASFETDPPDLAEMTRRFQALQDAGMPYVVAEADGTLLGYAYAGPHRARPAYRNTVEDS IYLDTAAQGRGVGTLLLQALIRDCEARGFKQMVAVVGGGHQNPGSARLHARCGFREVG VLEHVGYKFDRWLDCLLMQRSL" gene 206570..207547 /locus_tag="Rpic12D_3648" /db_xref="GeneID:8021335" CDS 206570..207547 /locus_tag="Rpic12D_3648" /inference="protein motif:SMART:SM00450" /note="SMART: Rhodanese domain protein; KEGG: rso:RS00824 hypothetical protein" /codon_start=1 /transl_table=11 /product="Rhodanese domain protein" /protein_id="YP_002983579.1" /db_xref="GI:241665220" /db_xref="InterPro:IPR001763" /db_xref="GeneID:8021335" /translation="MHDLFPLLAEYGAFAVFLNVLLTQAGAPLPAVPTLLVGGALTLN GPLFFMELLPAAITGALLGDGLWYLAGKRYGRHVMALLCRVSLSPDSCVRRTRTQFER WGAPLLLVSKFVPGLSTVSSALLGTMRTPFSTFVLYNLAGSALWAIIWLMLGRVAHDS IDQALRQLDLLGARAIVLILLLAVAYVTVRWLQRWRFRKMLEMVRISPDELHALIESG AAPVIVDVRADSSRQLQPQRIPGAVLYAMSSQHNAIEIDGPDREIVIYCACPNEASAV AVARTLMSRGFKRVRPLHGGIDAWIARGYGVEHVVPVTPATLQAAEARA" gene complement(207890..209467) /locus_tag="Rpic12D_3649" /db_xref="GeneID:8021336" CDS complement(207890..209467) /locus_tag="Rpic12D_3649" /inference="protein motif:PFAM:PF02120" /note="PFAM: flagellar hook-length control protein; KEGG: rso:RSp0395 flagellar hook-length control protein" /codon_start=1 /transl_table=11 /product="flagellar hook-length control protein" /protein_id="YP_002983580.1" /db_xref="GI:241665221" /db_xref="InterPro:IPR001635" /db_xref="GeneID:8021336" /translation="MGLSATQNAATKDLGAMFSAGHAAADKGQGASSGTDTFGNLLSD RLQLDRAAQQAADRRADAQPTTDDAGRKDAAYANAPRNDPDASPADASAPAQAAATPA TSAQDAVNAKPAKTTDTKDLDAAAQAVADPAAQLAAQIEAARQAAQQAAQQVIAPTAS QSGAQPNDNVTGATQPGGKSAAADAAALAALNAAATAAQGSTDPAAAPVQAGQAALQA ASHGKDAKGTAAGAMTAPNTPTPPATPLPDGAALAQTLARTRAVADNTPSAVRQLGTA SQAPGAGGEHGLPRRADASAHGNVTQTAAAAVSDAASQSRDGGNAGTQADSQGTGTQF QGMLARANGDASMAAPTFAVGNAGAAGPAAGASISPAQIHTLPTFGDAAWPQSMASQL AFMQVHRQSSAELQLNPAELGGLHVKLEVDNGAVNASFVCQHQAVAELVQDAMPRLRD ALQQGGMQLAQTSVSTGDFSQQQNAWQGSSAQGNGSGNGGGGRFGGAGQNRAEGDAVA ATPSRVSSHDGAVDTFA" gene complement(209503..209967) /locus_tag="Rpic12D_3650" /db_xref="GeneID:8021337" CDS complement(209503..209967) /locus_tag="Rpic12D_3650" /inference="protein motif:TFAM:TIGR02473" /note="TIGRFAM: flagellar export protein FliJ; PFAM: flagellar FliJ protein; KEGG: rso:RSp0394 flagellar protein" /codon_start=1 /transl_table=11 /product="flagellar export protein FliJ" /protein_id="YP_002983581.1" /db_xref="GI:241665222" /db_xref="InterPro:IPR000809" /db_xref="InterPro:IPR012823" /db_xref="GeneID:8021337" /translation="MTTMNKPFRLETLLELAQKDTEKATQEVGRLMNTREAATQKLAL LSDYRNNYHQQMLSSAEGGMDVTRLRNYAAFIDRLGNAVHQQKGTINALEQQLAMSRA NWLEKQRREQSFDILRQRHIEEQRLDQERRAQRENDEHAAKLIRMRAAQGGN" gene complement(210076..211515) /locus_tag="Rpic12D_3651" /db_xref="GeneID:8021338" CDS complement(210076..211515) /locus_tag="Rpic12D_3651" /EC_number="3.6.3.14" /inference="protein motif:TFAM:TIGR01026" /note="KEGG: rso:RSp0393 flagellum-specific ATP synthase; TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SMART: AAA ATPase" /codon_start=1 /transl_table=11 /product="ATPase, FliI/YscN family" /protein_id="YP_002983582.1" /db_xref="GI:241665223" /db_xref="InterPro:IPR000194" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR004100" /db_xref="InterPro:IPR005714" /db_xref="GeneID:8021338" /translation="MSLETVQSPAQSASSNPNVRVWQSHLRQTAQRARLARPVVTCGK LTRVAGLVMEAVGLKLPVGSACRVELPHGRHVLAEVVGFAEERAFLMPQTDLVGVVPG ARVFPLEAQHLPADAADPTISHSKFLPVGPRLLGRVVDANGEPLDGKGPLGNPDELAW GTLAPAPLNPLKRKPIENVMDVGVRAINGLLTVGQGQRLGLFAGSGVGKSVLLGMMAR YTQADVVVVGLIGERGREVKEFIDEILGDEGLARSAVVAAPADTSPLMRLQGAAYAHT IAEYFRDRGCNVLLIVDSLTRYAMAQREIALAIGEPPATKGYPPSAFAKLPALVERAG NGMVDADGRGGSITAFYTVLAEGDDQQDPIADAARAILDGHFVLSRKLAEQGHYPAID IEQSISRVMSAIVPREQLDTARRFKQLYARYQRNRDLIAVGAYARGSDPVTDQAIARY PDMEAFLQQGMFENESREHTLQKMQGVLA" gene complement(211505..212242) /gene="fliH" /locus_tag="Rpic12D_3652" /db_xref="GeneID:8021339" CDS complement(211505..212242) /gene="fliH" /locus_tag="Rpic12D_3652" /inference="protein motif:PFAM:PF02108" /note="PFAM: flagellar assembly protein FliH; KEGG: rso:RSp0392 flagellar assembly protein H" /codon_start=1 /transl_table=11 /product="flagellar assembly protein FliH" /protein_id="YP_002983583.1" /db_xref="GI:241665224" /db_xref="InterPro:IPR000563" /db_xref="GeneID:8021339" /translation="MPRPPIIPRDTLVEYQPWEPTDFVREARLAAADAAPPPPPPEPE EPPISEEEWQAALEAELANARDEGRRDGFAQGFQDGFEQGRRQGEDDSRQIAALMQSV RDAVDQLNGSVADELVDLALQLAQQFLHGALHAQPERIVPLVREVLGDAPTAPAPAML RVHADDAELIRQMLGTELAAAGWTLIVDAAIERGGCRVQTRFGETDATLQTRWAELTR ALGRDTAWIASERSEAERVAGGALHVA" gene complement(212275..213267) /gene="fliG" /locus_tag="Rpic12D_3653" /db_xref="GeneID:8021340" CDS complement(212275..213267) /gene="fliG" /locus_tag="Rpic12D_3653" /inference="protein motif:TFAM:TIGR00207" /note="TIGRFAM: flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG; KEGG: rso:RSp0391 flagellar motor switch protein G" /codon_start=1 /transl_table=11 /product="flagellar motor switch protein FliG" /protein_id="YP_002983584.1" /db_xref="GI:241665225" /db_xref="InterPro:IPR000090" /db_xref="GeneID:8021340" /translation="MSAEGLQRSAILMMSLGESEAAEVLKHLGPREVQKLGATMAALK NVSRERVLDAFDAFFVEAEDLPLDIDSNEYIRTVFRKALGDDRAANIIDRILSGGDTS GIEGLKWMDASSVAELIRNEHPQIIATILVHLDRDQASEILTYFTERLRNDTILRIAT LDGIQPSALRELNDVLTKLLQGNDHRKKNAMGGVLTAAEILNLVPSAVESAVIEGVRS RDPELADAIVEKMFVFDNLIDLDNRSLQTLLREVGQEVLVVALKGAKQEFRDKVFANM SQRAGMMLKEELEVLGPVKVSEVEAQQKEILVIARRLADEGEITIGRKAEDAYV" gene complement(213264..215099) /locus_tag="Rpic12D_3654" /db_xref="GeneID:8021341" CDS complement(213264..215099) /locus_tag="Rpic12D_3654" /inference="protein motif:TFAM:TIGR00206" /note="TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring domain protein; KEGG: rso:RSp0390 flagellar M-ring transmembrane protein" /codon_start=1 /transl_table=11 /product="flagellar M-ring protein FliF" /protein_id="YP_002983585.1" /db_xref="GI:241665226" /db_xref="InterPro:IPR000067" /db_xref="InterPro:IPR006182" /db_xref="InterPro:IPR013556" /db_xref="GeneID:8021341" /translation="MPTTADSVAVADTLGTVDMPAVGQGAMTRQHAGALGALGPLGRL SPRLLMMIGGAALVAVLAAVMLWSRAPDYRVLFSNVSDADGGAIIAALQQMNVPYRFA DGGTAIMVPEANVHETRLKLASQGLPKGGLAGFELMENQKFGTSQFAEQVNYQRALEG ELARTIQAMQEVQSARVHLALSKPSVFVREQAKPSASVLLTLYPGRMLDRSQVQAIGH LVSSSVPNLPLANVTVVDQAGRLLSSSFQDNASGLDPTQLNYVREIEQGYIKRIEAIL GPVVGDDNVRAQVTADVDLDNTEQMAETYRPNQDPSTAAVRSTHTAESTQNKADAQGG VPGALSNQPPTAPRMLPTAPAPASQPAAAGPNGANGQAQQPAAANTNATTTNGATSST RDTTTNYEVDKTVRRTRAAVGTVRRLSVAVVVNYRADGKTWKPLSDAEMAKLNALVKD AVGFDAKRGDSVNVVNSQFSGTLPVPKDDLPLWKQPEMIQYAIQAAKYLALAIGFLIL VFAVIRPLIRSLNKKDAPATPTFVGREGEDPNAPIITGAAASAGPELEGPSSSAIGAG GEDVPDSLPQLKNADFEHKLETMRRVAQQNPRAVAAVIKQWVSNE" gene 215343..215678 /gene="fliE" /locus_tag="Rpic12D_3655" /db_xref="GeneID:8021342" CDS 215343..215678 /gene="fliE" /locus_tag="Rpic12D_3655" /inference="protein motif:TFAM:TIGR00205" /note="TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: rso:RSp0389 flagellar hook-basal body protein FliE" /codon_start=1 /transl_table=11 /product="flagellar hook-basal body complex subunit FliE" /protein_id="YP_002983586.1" /db_xref="GI:241665227" /db_xref="InterPro:IPR001624" /db_xref="GeneID:8021342" /translation="MDITNANSVVSLMNSVLAPSSQVGGIGGSTGGADSKVSVDFGSV LKSSLDRVDASQQKAEAVSRSFEMGNNDVDLHDVMLSLQKANIDLQTAVQVRNKLVSA YQNIMSMSI" gene 215742..216842 /locus_tag="Rpic12D_3656" /db_xref="GeneID:8021343" CDS 215742..216842 /locus_tag="Rpic12D_3656" /inference="protein motif:PFAM:PF00535" /note="PFAM: glycosyl transferase family 2; KEGG: rso:RS00815 hypothetical protein" /codon_start=1 /transl_table=11 /product="glycosyl transferase family 2" /protein_id="YP_002983587.1" /db_xref="GI:241665228" /db_xref="InterPro:IPR001173" /db_xref="GeneID:8021343" /translation="MSKHAKHRAKPDIALVVIARDEAACIERCLLSAKPHVDRMIVLD TGSTDDTVAIAKACGAQVHHFKWVDDFSAARNAALAAANADWNLVLDADEWIESGAEE LRSACTFGPLLGVVCIRSEFDVSGPVEHSNSWIARLLPRGVRYKGRIHEQPAANLQRV RLPLVLGHDGYMTAKLDKKRGRNHTLLQLELAAHRDDPYVLYQLGKDFEINQKDPTQA AAHYEQALAKAPKQVPYRHDLCICLLACLSKSGQLDRAITLAGEWMEEWSGSPDYFYM LGHLMFEAAAKDPAQAEKQWLPMAENAFLKCLEIGEQPKLDAAVFGRGSFAAAKYLAL TYRALADTLAIKSNQYSDLARQMQERSAVAAA" gene 216853..217626 /locus_tag="Rpic12D_3657" /db_xref="GeneID:8021344" CDS 216853..217626 /locus_tag="Rpic12D_3657" /inference="protein motif:TFAM:TIGR02623" /note="TIGRFAM: glucose-1-phosphate cytidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: cti:RALTA_B2136 glucose-1-phosphate cytidylyltransferase (CDP-glucose pyrophosphorylase)" /codon_start=1 /transl_table=11 /product="glucose-1-phosphate cytidylyltransferase" /protein_id="YP_002983588.1" /db_xref="GI:241665229" /db_xref="InterPro:IPR005835" /db_xref="InterPro:IPR013446" /db_xref="GeneID:8021344" /translation="MKTVILAGGLGTRISEESHLRPKPMIEIGGRPILWHIMKIYAAH GINDFIICLGYKGYVIKEYFANYFLHMSDVTFDMSKNEVTVHERHAEPWRVTLVDTGE QSQTGGRLKRVAAYLDPNEPFCFTYGDGVSDIDITSKIAFHREHGKMATVTAVQPPGR YGMLQRDGARVTGFTEKPPGDGGSWINGGFFVLNPAVIEYIASEDTPWEGAPMARLAE MGELNTFEHHGFWQPMDTLRDKNSLEALWQAGSAPWKKW" gene 217626..218717 /locus_tag="Rpic12D_3658" /db_xref="GeneID:8021345" CDS 217626..218717 /locus_tag="Rpic12D_3658" /inference="protein motif:TFAM:TIGR02622" /note="TIGRFAM: CDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; KEGG: cti:RALTA_B2137 CDP-glucose 4,6-dehydratase" /codon_start=1 /transl_table=11 /product="CDP-glucose 4,6-dehydratase" /protein_id="YP_002983589.1" /db_xref="GI:241665230" /db_xref="InterPro:IPR001509" /db_xref="InterPro:IPR002225" /db_xref="InterPro:IPR003869" /db_xref="InterPro:IPR013120" /db_xref="InterPro:IPR013445" /db_xref="GeneID:8021345" /translation="MLDPRAWAGKRVFLTGHTGFKGSWLALWLRQLGAEVYGYSLAPE TTPNLFTAADVEPALAGHTLADIRDAEALRIAMTAARPDVVFHLAAQPLVRASYNDPV GTYATNVMGTVNVLEAARGCTNLAAIVVATTDKCYDNREWAWGYRETDALGGHDPYSA SKACAELVVASYRRAFFANGPLLATGRAGNVIGGGDWSEDRLIPDAERAMRAGAPLVI RSPHATRPWQHVLDCLHGYLLLAQRLLAGDAACATAWNFGPDSAATRTVEQVLQGLQH HWPTLIWQLDANSATGKHEAGMLHLDASRARQQLGWQTAWPFETALEQTAAWYRHLHE KTAGARALCDQQIDRFTAVASAATSWSAA" gene 218714..219307 /locus_tag="Rpic12D_3659" /db_xref="GeneID:8021346" CDS 218714..219307 /locus_tag="Rpic12D_3659" /EC_number="5.1.3.13" /inference="protein motif:TFAM:TIGR01221" /note="KEGG: dol:Dole_1961 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related" /codon_start=1 /transl_table=11 /product="dTDP-4-dehydrorhamnose 3,5-epimerase" /protein_id="YP_002983590.1" /db_xref="GI:241665231" /db_xref="InterPro:IPR000888" /db_xref="GeneID:8021346" /translation="MSRFTIQPTPLAGVVEISRKVIGDHRGYFTRFFCADELAAAGFD SPIAQINHSYSAKRGTVRGLHFQYPPHAEIKLVSCVRGRVFDVAVDLRAGSPTFLQWH AVELSAERHNSLLVPRGFAHGFQALEDDCELLYLTSTPYAQAAEDGINPTDSRLGIAW PLDITECSDRDRNHPPLTNAFAGIALRALNPELQEQP" gene 219304..220455 /locus_tag="Rpic12D_3660" /db_xref="GeneID:8021347" CDS 219304..220455 /locus_tag="Rpic12D_3660" /EC_number="2.6.1.50" /inference="protein motif:PRIAM:2.6.1.50" /note="PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: rlt:Rleg2_4213 glutamine--scyllo-inositol transaminase" /codon_start=1 /transl_table=11 /product="Glutamine--scyllo-inositol transaminase" /protein_id="YP_002983591.1" /db_xref="GI:241665232" /db_xref="InterPro:IPR000192" /db_xref="InterPro:IPR000277" /db_xref="InterPro:IPR000585" /db_xref="InterPro:IPR000653" /db_xref="InterPro:IPR001597" /db_xref="GeneID:8021347" /translation="MTQKILYSKPSITELEVEYATDAARNGWGDQCYAYINRFEKQFA EFVGTQYAIATSSCTGAMHMGLAALGIGAGDEVILADTNWIATASPITYVGATPVFVD ILPDTWCLDPALVEAAITPRTKAIIATHLYGNLCEMDRLLDIGKRHGIPVIEDAAEAV GSRWHGHATGSQGIFGTFSFHGTKTMTTGEGGMFVTNDRALYDRVMTLNNHGRVPGGK QFWSDFIGFKYRISNVQAAIGCAQLERIDALVARKREIFAEYQAHLGGVAGLALNPEA PGTLNSYWMPTVVFDEALGITRDGLLAAFSRRGIDARVFFYPLSQTELFGTSEATARH NAPNSYAIAERAINLPSYHDMSSENIATVCNVVLDLVKAHQETLTCLAS" gene 220440..221282 /locus_tag="Rpic12D_3661" /db_xref="GeneID:8021348" CDS 220440..221282 /locus_tag="Rpic12D_3661" /inference="protein motif:PFAM:PF05721" /note="PFAM: Phytanoyl-CoA dioxygenase; KEGG: azc:AZC_3474 putative phytanoil-CoA alpha hydroxylase" /codon_start=1 /transl_table=11 /product="Phytanoyl-CoA dioxygenase" /protein_id="YP_002983592.1" /db_xref="GI:241665233" /db_xref="InterPro:IPR008775" /db_xref="GeneID:8021348" /translation="MPGILSPDQVETFQRDGLLILRDFYAPSQVEPIQRAIYDIIGLV IDKYRLDIERAPFAPERFDDGYQAVIKANRKYGAEVYDAVKQIPAFVRLLGDERHEQL VRCVRPGALPGIAHAGSGIRIDNPREEKFRANWHQEYPAQLRSLDGVVFWSPLVEITP EIGPVEFCPGSHVEGPLPVFSADPDNAGKQGAYALLIKDEASYLARYPHVQPLTKPGD LVMVDFLVLHASGHNTSQRSRWSMQFRYFNFCEPTGRSHGWKGSYANGVDFRTVHPEL SVEA" gene 221285..222460 /locus_tag="Rpic12D_3662" /db_xref="GeneID:8021349" CDS 221285..222460 /locus_tag="Rpic12D_3662" /inference="protein motif:PFAM:PF08242" /note="PFAM: Methyltransferase type 12; Methyltransferase type 11; KEGG: azc:AZC_3475 hypothetical protein" /codon_start=1 /transl_table=11 /product="Methyltransferase type 12" /protein_id="YP_002983593.1" /db_xref="GI:241665234" /db_xref="InterPro:IPR013216" /db_xref="InterPro:IPR013217" /db_xref="GeneID:8021349" /translation="MTQGALPCNVCQQPLAEPIYRAAPQSSLSSLRRAMDGTLEVFCC AACGHIQTAELCDNGSFYDTEYDILVGSEEEDQIYAVENGQKIFRADHQVATFQRKLA LPEGARVVDFGCAKSATMRLLKQQRPDVNVHLFDISDRYVGFWEKFLSPEQWATYTIP PAWQRSFDVVSSFFSLEHIPDLTTALRNIHSLLRDGGRLYAIVPNTFTNSVDFLVADH VNHFTHTSLQTLLANHGFDLLEADAHSHRGAFVVTAARRPGDSKVAPVIDAQELADTQ RAANKLANFWQQASSHLTDFETQHGSAPAVIYGAGFYGAYTASNLQQPHALRAFVDQN PYLQGSSLAGKPVVALDSIPDEVEVVYLAVNPVIADEVRHTVEAAYPNRFRYFRFQP" gene 222457..222972 /locus_tag="Rpic12D_3663" /db_xref="GeneID:8021350" CDS 222457..222972 /locus_tag="Rpic12D_3663" /inference="protein motif:PFAM:PF00583" /note="PFAM: GCN5-related N-acetyltransferase; KEGG: azc:AZC_3472 putative acetyltransferase" /codon_start=1 /transl_table=11 /product="GCN5-related N-acetyltransferase" /protein_id="YP_002983594.1" /db_xref="GI:241665235" /db_xref="InterPro:IPR000182" /db_xref="GeneID:8021350" /translation="MIARGSLVLREWRESDIPQLLPLRNDVPTQLQLMTRPRPNSAAS VRDWLIAKSKQSDLVLFVIASQADDSVLGYLQLNHIDAVNRHASLGICLASSAQGKGH GRAACEAAFAYASETLCLRKITLEVLAENTRAIALYEKLDFRTIGTLAGHYLQDNRWH DVVLMERMLSS" gene 222969..223682 /locus_tag="Rpic12D_3664" /db_xref="GeneID:8021351" CDS 222969..223682 /locus_tag="Rpic12D_3664" /inference="protein motif:PFAM:PF08889" /note="PFAM: WbqC-like family protein; KEGG: azc:AZC_3473 hypothetical protein" /codon_start=1 /transl_table=11 /product="WbqC-like family protein" /protein_id="YP_002983595.1" /db_xref="GI:241665236" /db_xref="InterPro:IPR014985" /db_xref="GeneID:8021351" /translation="MKVVITQPMLFPWVGLLEQILLADVLVNYADVQFSKGSFTNRVQ IKEPAGTRWMTVPLEKFHLGARIDEVKPATNVDWRAQHLRMLEQAYEAAPHASDMLAL VRSVYDADYANMGALALASMRAVCRYLGIDLDSKFVDSPELDIPGRNSDRVLAIVKKL QGDTYITGHGAKNYLAHAEFEQQGVAVEYMNYAMRPYPQLHGAFTPFVSSLDLIANHG PAGKQYMCPQTLNWREFIQ" gene 223679..224953 /locus_tag="Rpic12D_3665" /db_xref="GeneID:8021352" CDS 223679..224953 /locus_tag="Rpic12D_3665" /inference="protein motif:PFAM:PF00535" /note="PFAM: glycosyl transferase family 2; KEGG: azc:AZC_3476 glycosyltransferase" /codon_start=1 /transl_table=11 /product="glycosyl transferase family 2" /protein_id="YP_002983596.1" /db_xref="GI:241665237" /db_xref="InterPro:IPR001173" /db_xref="GeneID:8021352" /translation="MSEIEAIQTEALQDIAPVKHDAVIQQVALSVCIPTYNRARYLEN LLAELVSQIGELKFSYELLIGDNCSTDATEEVVGRYQDKLNIRYFRRPSNLGSAENLN QLYRSAQGKYVLYHADDDLPILAEINNNIDIFERNPGVDVIFAPWFIHDLPTRQDVTA FYRQDDNYLIEQHDYAKLLALVLSHHLFPEIYLARREVMDRIYFSAPEPAFYAFVHAA EMLGSSAVYFSKTPFYRSVSRYFADETRAQAGNEEVKHAWDRYRGGLEYLFGKFSHTL PAAERPEWLNAINQFVLARMKVALRLRTHEGGNWIDNYYIANRVRALGEVSDLPAPYD LYRVNAAFEYVTKLDPFKPEPPKYATLRRAPLQVFHHAHGFADTEFLVLDDDDAIPHH TIVVTPIPMDIAVPAGREVRFVSELETLAKFP" gene 224972..225298 /gene="fliE" /locus_tag="Rpic12D_3666" /db_xref="GeneID:8021353" CDS 224972..225298 /gene="fliE" /locus_tag="Rpic12D_3666" /inference="protein motif:TFAM:TIGR00205" /note="TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: rso:RSp0389 flagellar hook-basal body protein FliE" /codon_start=1 /transl_table=11 /product="flagellar hook-basal body complex subunit FliE" /protein_id="YP_002983597.1" /db_xref="GI:241665238" /db_xref="InterPro:IPR001624" /db_xref="GeneID:8021353" /translation="MDLSNAHSVVSLMNSVLAPSTVGGSTASGETGKPSVDFGSVLKS SLDRVDASQQKAEAISRSFEMSNNDVDLHDVMLSLQKANIDFQTAVQVRNKLVSAYQS IMSMSV" gene 225441..225863 /locus_tag="Rpic12D_3667" /db_xref="GeneID:8021354" CDS 225441..225863 /locus_tag="Rpic12D_3667" /inference="protein motif:PFAM:PF02566" /note="PFAM: OsmC family protein; KEGG: rru:Rru_A0476 OsmC-like protein" /codon_start=1 /transl_table=11 /product="OsmC family protein" /protein_id="YP_002983598.1" /db_xref="GI:241665239" /db_xref="InterPro:IPR003718" /db_xref="GeneID:8021354" /translation="MKTLYQTQVTAEGGRAGHVRSADGVLDLPLSLPRELGGAGGAAT NPEQLFAAGYAACFENAVLHVARLKQIKLASTAVTATVGIGPREDGGFALTVSLAATL GGVDQATAEALVMAAHGVCPYSHAVRGNIDVQLTTVTR" gene 225929..226372 /locus_tag="Rpic12D_3668" /db_xref="GeneID:8021355" CDS 225929..226372 /locus_tag="Rpic12D_3668" /inference="protein motif:PFAM:PF01047" /note="PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: rso:RS00814 putative transcription regulator protein" /codon_start=1 /transl_table=11 /product="transcriptional regulator, MarR family" /protein_id="YP_002983599.1" /db_xref="GI:241665240" /db_xref="InterPro:IPR000835" /db_xref="GeneID:8021355" /translation="MNDVLALDQQLCFPLYAAGHLLTRLYRPLLDELGLTYPQYLVMM ACWQQAPCAVGDLGRALYLDTGTLTPLLKRLEEQGLLTRTRDREDQRRVVIELTDAGR ALRERATRVPEALACKIPLKLSEIGATRDVLRKLLDALATADERG" gene 226359..227453 /locus_tag="Rpic12D_3669" /db_xref="GeneID:8021356" CDS 226359..227453 /locus_tag="Rpic12D_3669" /inference="protein motif:PFAM:PF00535" /note="PFAM: glycosyl transferase family 2; KEGG: rso:RS00815 hypothetical protein" /codon_start=1 /transl_table=11 /product="glycosyl transferase family 2" /protein_id="YP_002983600.1" /db_xref="GI:241665241" /db_xref="InterPro:IPR001173" /db_xref="GeneID:8021356" /translation="MSEASVQLTSPDLALVVIARNEAASIERCLLSAKPFVSRMVVLD TGSTDDTVAIAEACGARVSHFAWTDDFSAARNAALAAANADWNLVLDADEWLESGGEH LRMLGSTPPSLGVVCVKNDTDAGESSHLIAWIPRLLPRGVRYVGRIHEQPVSSLPAAR VPVVIRHDGYTPAKMQHKGERNTRLLLAELEHRPDDPYVLYQLGKETELHREDHATAA QYYARAYDLAPPDAPYRCNLALRYLYCLGKADRMEDAMAHADVSIRAWPDFPDLCFAL GLVLVDAAVRHPEDADTRWLPLAEQVFNRCLEIGDRADMDGSVTGRGSFLAAQQLAIV YQMQSRALARKSEQYLAMSKRLQDAPQPLA" gene complement(227464..227820) /locus_tag="Rpic12D_3670" /db_xref="GeneID:8021357" CDS complement(227464..227820) /locus_tag="Rpic12D_3670" /inference="similar to AA sequence:KEGG:RSp0385" /note="KEGG: rso:RSp0385 flagellar protein FliT" /codon_start=1 /transl_table=11 /product="flagellar protein FliT" /protein_id="YP_002983601.1" /db_xref="GI:241665242" /db_xref="GeneID:8021357" /translation="MHRNIPIKDSESLFACYEAIARLTAEMVGAAEVGNWEVVSTLER ESAIYVDALRRSEPHPPLSHADIERKRTLLVRILEDDARVRAMVYPRLERLQKRIDTA RRASTASNAYGSMARF" gene complement(227876..228298) /locus_tag="Rpic12D_3671" /db_xref="GeneID:8021358" CDS complement(227876..228298) /locus_tag="Rpic12D_3671" /inference="protein motif:TFAM:TIGR00208" /note="TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS; KEGG: rso:RSp0384 flagellar protein FliS" /codon_start=1 /transl_table=11 /product="flagellar protein FliS" /protein_id="YP_002983602.1" /db_xref="GI:241665243" /db_xref="InterPro:IPR003713" /db_xref="GeneID:8021358" /translation="MYAARRAIGAYAQVGIETSVVDANPHRLIAMLFEGARAAISMAS AAIQRGDVPAKLRAVDKAISIIGQGLQASLDHQRGGEIAAQLNGLYDYMLRRLLLANA TNDVGVLAEVDGLLVPLQEAWAAIGQPGAVNSHLSVVS" gene complement(228349..230391) /locus_tag="Rpic12D_3672" /db_xref="GeneID:8021359" CDS complement(228349..230391) /locus_tag="Rpic12D_3672" /inference="protein motif:PFAM:PF07195" /note="PFAM: flagellar hook-associated 2 domain protein; flagellin hook IN repeat protein; flagellar hook-associated protein 2 domain protein; KEGG: rso:RSp0383 flagellar hook-associated protein 2" /codon_start=1 /transl_table=11 /product="flagellar hook-associated 2 domain protein" /protein_id="YP_002983603.1" /db_xref="GI:241665244" /db_xref="InterPro:IPR003481" /db_xref="InterPro:IPR010809" /db_xref="InterPro:IPR010810" /db_xref="GeneID:8021359" /translation="MATTTTSTTSNYVPPISIPGIGTSIDVNTLVSSLMKVESQPLTL LQNQQSSYQTQLSAVGTLKSALSTFQTALSNLTTASNYSAMKASGYDTSVLSASVTSA AAAGSYAVNVSQLAQSQVLAAQGQTSTTTAIGSGTSTTVSFSFGTVSGGTFSNGKYSG ATFTQNGSLAGGSITINSSNNTLAGIRDAINSANLGVSASIVNDGSGNPYRLVLTSTA GGSNSEMKISVSGDSTLQSLLAQDPAGTQNMTEVTTGQNALATINGIAVQSPTNTLSN VVTGTSFTLAKTGSTTVTVANDPTATTNAVNSFVNGYNALRTQLNTLTNIDTSNSANN GPLAGDVSTKTLINQITDVLGQAIGTGTYQSLGSVGVTMNADGTLSVDNTKLSAAIAA SPSQVTGLFAGTGTATDSLVSVPSFTDTTQAGTYAVSVTQLATQGSLSGSAAANTTIT AGVNDTLAFNISGMAVNVTVPAGSYSASSLAAQIQSQINASTTLQTAKVTASVSANAS GVMTITDSQFGSVSAVSVSGNGAASLMGSSPTAVAGLDVQGTINGVAATSSGQNLYGA TGTAVDGLTVQVAGGAVGSRGTVTVQRGYAAQLNTVTTNLLSSSGMVQNETDAINNSL SSLASQISVMQTRLDNKQALYYAQFNALSALVASMTNTSTYLTTQLAAIQNQTKSG" gene complement(230578..231399) /locus_tag="Rpic12D_3673" /db_xref="GeneID:8021360" CDS complement(230578..231399) /locus_tag="Rpic12D_3673" /inference="protein motif:PFAM:PF00700" /note="PFAM: flagellin domain protein; KEGG: rso:RSp0382 flagellin protein" /codon_start=1 /transl_table=11 /product="flagellin domain protein" /protein_id="YP_002983604.1" /db_xref="GI:241665245" /db_xref="InterPro:IPR001029" /db_xref="InterPro:IPR001492" /db_xref="GeneID:8021360" /translation="MSLSLNTNISSLQTQQALSQSQSALQTSLERLSTGLRVNSAKDD AAAYAVASSLTTKLNSQTQGIQNSNQALAYLQTSDSYLGQVENNLQRMRQLAVEANNG GLSTTDQANLDKEYQQLAAANKSIETNANYNGNKLFDGSVTSTTFQYGQNAATDTTTV TNANLASFGTLSGTSVSTTANATAAQAAIDTDLTNLKAARASLGAQQSGLNSTINTLT SSNTALSAAKSSMIDTDYAAETSNMTRQNILQQAGTAMLAQANSAPNSILSLLKG" gene 231798..232433 /locus_tag="Rpic12D_3674" /db_xref="GeneID:8021361" CDS 231798..232433 /locus_tag="Rpic12D_3674" /inference="protein motif:PFAM:PF00196" /note="PFAM: regulatory protein LuxR; response regulator receiver; SMART: regulatory protein LuxR; response regulator receiver; KEGG: rso:RS00809 transcription regulator protein" /codon_start=1 /transl_table=11 /product="two component transcriptional regulator, LuxR family" /protein_id="YP_002983605.1" /db_xref="GI:241665246" /db_xref="InterPro:IPR000792" /db_xref="InterPro:IPR001789" /db_xref="GeneID:8021361" /translation="MLNVLIVEPHDIARVGLRQILKDSRLARQIEAVPDLRNANHDLL AQREWDVMLFSVESATGDEFQTIKTVRQQHARLAVLALGRHPEALLAVRALKAGASGY LPMDASQPQLLAAVNAISKGKKYLPSDLVEVLADNLNVDWDKPRHDILSDREFQTLRM LGSGRTLSEIAEALQISAKTVSVYRGRVLSKMKLRNNAELTMYVVSNGLQF" gene complement(232434..234392) /locus_tag="Rpic12D_3675" /db_xref="GeneID:8021362" CDS complement(232434..234392) /locus_tag="Rpic12D_3675" /inference="protein motif:TFAM:TIGR00254" /note="KEGG: rso:RS00808 hypothetical protein; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein" /codon_start=1 /transl_table=11 /product="diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)" /protein_id="YP_002983606.1" /db_xref="GI:241665247" /db_xref="InterPro:IPR000014" /db_xref="InterPro:IPR000160" /db_xref="InterPro:IPR001633" /db_xref="InterPro:IPR013656" /db_xref="InterPro:IPR013767" /db_xref="GeneID:8021362" /translation="MALPRKICAPLPLYLTRRRRLGPARRHALLEAALNSLTFPTRGA GLSIVADGLPADCPARGEPPGFSPKLDLLSMVNALTEGILVCGADRCVSYANPSAARL LGLPLDELVGRPLPTVVHAAVDEFETSIHETDWPDLDVLAEGQPQLNQIFGLHCLDGR TVWVSSNWTPLYTEGGHSTTAAPGAARQGARPYSVLVSLVDITQIREAQQRIRHLATH DTLTGLLNRSALEDRLEHALALGRRNRSRVSVMFLDLDRFKNVNDTLGHQFGDMLLRE VAARLQACAREADTVARLGGDEFVVMLESLDAMGTRRVAERILSAIGAPFHIEGQELY LGVSIGIAVAPRDGDDPHTLLRKADAAMYLAKERGRNNFQTFTSDLDDRVSRRFRIES GLRRASDRNEFYADYQPRVDVRSGRIVGVEALIRWNSADFGRMMPGQFIQDAEETGLI VEIDRWILRAACDQLARWRRIGLPHLRMSINLSGQAFSSGKLSDMVRRALSASGLPGD AVELEMTEGILIRDDPSLHALLTELRAMGVSLALDDFGTGYSSLSYLHRFPIDTLKID RSFVQDLPHVAERAAITRAIIMMAQAMGMRTVAEGVESTGQLDFLREVGCDEFQGYLL TRPLEPGAVQNLVRENARRYGERIPRFL" gene 234668..235162 /gene="fliL" /locus_tag="Rpic12D_3676" /db_xref="GeneID:8021363" CDS 234668..235162 /gene="fliL" /locus_tag="Rpic12D_3676" /inference="protein motif:PFAM:PF03748" /note="PFAM: flagellar basal body-associated protein FliL; KEGG: rso:RSp0379 flagellar basal body-associated protein FliL" /codon_start=1 /transl_table=11 /product="flagellar basal body-associated protein FliL" /protein_id="YP_002983607.1" /db_xref="GI:241665248" /db_xref="InterPro:IPR005503" /db_xref="GeneID:8021363" /translation="MAEAAAATTAPAPAKGGSTKLLLIILIVLVLVGMGGAAAWFFLG GANHTASASAPAKPKEPIFVAMETLTVNLQPEEGNDRYLQVGITFKSFNKHAEDEIKT YTPELRSRILTLLASKTPTELYPAVGKAKLAKEIVEQCEQVYKAVGKESPVADVLFTN FVIQ" gene 235164..236171 /gene="fliM" /locus_tag="Rpic12D_3677" /db_xref="GeneID:8021364" CDS 235164..236171 /gene="fliM" /locus_tag="Rpic12D_3677" /inference="protein motif:TFAM:TIGR01397" /note="TIGRFAM: flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein; KEGG: rso:RSp0378 flagellar motor switch protein FliM" /codon_start=1 /transl_table=11 /product="flagellar motor switch protein FliM" /protein_id="YP_002983608.1" /db_xref="GI:241665249" /db_xref="InterPro:IPR001543" /db_xref="InterPro:IPR001689" /db_xref="GeneID:8021364" /translation="MLKEEFLSQEEIDALLKGVSDEADEEPVEADPSGIRTYNLGSQE RIVRGRMPTLEIINERFARNWRIGLFNFMRRNAEISVGPVKVQKYSEFIRNLVVPTSL NLVHVKPLRGTALFVFDPNLIFLVVDNLFGGDGRFHMRVEGRDFTDVEQRIIQRMLQL VFEHYARAWQPVYPIDFEFLRMEMHTEFANVATPNEVVVTTTFSLELGNNGGDVHICM PYTMIEPIRDRLTSAIQGEALEVDKRWLRLLSQQVQTAEVELIADLATANVQVSDILN MKVGDVIPLELDDVVTAKVDGVPVMECNYGTFNGQYALRVNRMLNMSGSEPATESDDD N" gene 236161..236613 /locus_tag="Rpic12D_3678" /db_xref="GeneID:8021365" CDS 236161..236613 /locus_tag="Rpic12D_3678" /inference="protein motif:TFAM:TIGR02480" /note="TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: rso:RSp0377 flagellar motor switch protein FliN" /codon_start=1 /transl_table=11 /product="flagellar motor switch protein FliN" /protein_id="YP_002983609.1" /db_xref="GI:241665250" /db_xref="InterPro:IPR001172" /db_xref="InterPro:IPR001543" /db_xref="InterPro:IPR012826" /db_xref="GeneID:8021365" /translation="MTTEPTMNPGASADDIDVEMTMEEAMALEAAQRAAANPPAATPA AESSPVFKPLTADGLGGAQRNDIDMILDIPVQLTVELGRTKVPIKNLLQLAQGSVVEL DALAGEPMDVLVNGYLIAQGEVVVVNEKFGIRLTDIITPSERIRKLNR" gene 236673..237056 /locus_tag="Rpic12D_3679" /db_xref="GeneID:8021366" CDS 236673..237056 /locus_tag="Rpic12D_3679" /inference="protein motif:PFAM:PF04347" /note="PFAM: flagellar biosynthesis protein FliO; KEGG: rso:RSp0376 flagellar FliO transmembrane protein" /codon_start=1 /transl_table=11 /product="flagellar biosynthesis protein FliO" /protein_id="YP_002983610.1" /db_xref="GI:241665251" /db_xref="InterPro:IPR007442" /db_xref="GeneID:8021366" /translation="MNHAVDWARTFGGLFVVLAMIVAAGWLLRRLQQRAGMGPGGRRS QVITVVAQQMLGAREKVVVVDVEGTWLVLGVTQQHVQTLHTLPRPADAAPTAGSDGTL ATGKPPRFADALSVQLKRHLTGKSE" gene 237053..237802 /gene="fliP" /locus_tag="Rpic12D_3680" /db_xref="GeneID:8021367" CDS 237053..237802 /gene="fliP" /locus_tag="Rpic12D_3680" /EC_number="3.1.1.3" /inference="protein motif:TFAM:TIGR01103" /note="KEGG: rso:RSp0375 flagellar biosynthesis protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein" /codon_start=1 /transl_table=11 /product="flagellar biosynthetic protein FliP" /protein_id="YP_002983611.1" /db_xref="GI:241665252" /db_xref="InterPro:IPR005837" /db_xref="InterPro:IPR005838" /db_xref="GeneID:8021367" /translation="MSTRAVFRCLVTLALLGAAPAVFAQAQPGLPLLTGTAGGQSYTL PVQTLIFLTSLGFLPAIILMMSSFTRIIIVLSLLRHALGTQTTPPNQVLIGLALFLTF FVMSPVLDKVYTDAYVPLRDNKITVEQAMDTAATPLRQFMLKQTREPDLALFVKMGNM PAIASPEQTPMRALIPAFVTSELKSAFQIGFAIFIPFLVIDIVVAAVLMSMGMMMVTP SIFSLPFKIMLFVLVDGWHLLLGSLAQSFVQ" sig_peptide 237053..237127 /gene="fliP" /locus_tag="Rpic12D_3680" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.705 at residue 25" gene 237812..238081 /gene="fliQ" /locus_tag="Rpic12D_3681" /db_xref="GeneID:8021368" CDS 237812..238081 /gene="fliQ" /locus_tag="Rpic12D_3681" /inference="protein motif:TFAM:TIGR01402" /note="TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3; KEGG: rso:RSp0374 flagellar biosynthesis protein FliQ" /codon_start=1 /transl_table=11 /product="flagellar biosynthetic protein FliQ" /protein_id="YP_002983612.1" /db_xref="GI:241665253" /db_xref="InterPro:IPR002191" /db_xref="InterPro:IPR006305" /db_xref="GeneID:8021368" /translation="MTPEYVLDMARQAMQVAMMVGAPMLLVSLIVGLLVAVFQAATQL NEQSLSFIPKLLAVAATMVLAGPWILSVIVDYTRNLLTNIPSYVN" gene 238115..238903 /locus_tag="Rpic12D_3682" /db_xref="GeneID:8021369" CDS 238115..238903 /locus_tag="Rpic12D_3682" /inference="protein motif:TFAM:TIGR01400" /note="TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; KEGG: rso:RSp0373 flagellar biosynthetic FliR transmembrane protein" /codon_start=1 /transl_table=11 /product="flagellar biosynthetic protein FliR" /protein_id="YP_002983613.1" /db_xref="GI:241665254" /db_xref="InterPro:IPR002010" /db_xref="InterPro:IPR006303" /db_xref="GeneID:8021369" /translation="MIQFTAAQLNGWIAMYWWPLVRVLAFIAMAPPFANTEVPTSIKI ALGVIITVALAPMLPVPVGVSVGSYEGLWITLLQAVIGLSLGFCVQLVFSAISGAGEV MSVQMGLGFASLLDPQQTESSMLLGRFISLTAITAFIAGDGHLVLLHALFDSFTALPV SAAPLANPGWQTLAGGGTMVFALAVRIALPIIAIMLVVNLGFAVLSRTAQALNPFAVG IAATLVVGLMLVMVMMTSLAPVVERSVMDALELGGRAFGQFGAQ" gene 239420..240022 /locus_tag="Rpic12D_3683" /db_xref="GeneID:8021370" CDS 239420..240022 /locus_tag="Rpic12D_3683" /inference="similar to AA sequence:KEGG:RS00799" /note="KEGG: rso:RS00799 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983614.1" /db_xref="GI:241665255" /db_xref="GeneID:8021370" /translation="MVRRRLSTLSKRALKVAHDCVADLPRARVVFASRHGELRRTAGI LADIEHAQPVSPTAFSLSVLNAMSGVFGIARGDTSPAIAVSAGPATLGLALLEAHAQY TLDPASPVLLVYADEPVESRFGAVTDEVDERALAILLDASAQGGLTCSHRPAAASGTA GMTTQSQAVLHCLASRTSGAWQHAGGTWTWQWREGSWQAH" gene 240007..240813 /locus_tag="Rpic12D_3684" /db_xref="GeneID:8021371" CDS 240007..240813 /locus_tag="Rpic12D_3684" /inference="protein motif:PFAM:PF01553" /note="PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: rso:RS00796 putative 1-acyl-sn-glycerol-3-phosphate acyltransferase alpha transmembrane protein" /codon_start=1 /transl_table=11 /product="phospholipid/glycerol acyltransferase" /protein_id="YP_002983615.1" /db_xref="GI:241665256" /db_xref="InterPro:IPR002123" /db_xref="GeneID:8021371" /translation="MASTLSARINQAWRLAATGLAFTVFGICGLLFSIIVFPLAWLWP HRATRQRTVTFVIHWFFRALVRALQWLGVMRVDVQGAELLRQGGPAIVVANHPTYLDV MVLLALTPSACCVVKNAHWSNPCFWGIVRAAEYISNADPTQLVEAGARQLASGYTMII FPEGTRSPARHRLHPFSRGFAHMALNVGAPILPVLMDCNPPAFTKTMRWYDVPPQAFC MKVAVLAPVSVAQYVPEGSPATLAARALTTGIETHITDHLLQYGFLEARN" gene 240788..241045 /locus_tag="Rpic12D_3685" /db_xref="GeneID:8021372" CDS 240788..241045 /locus_tag="Rpic12D_3685" /inference="similar to AA sequence:KEGG:Bphy_0691" /note="KEGG: bph:Bphy_0691 putative acyl-carrier protein" /codon_start=1 /transl_table=11 /product="putative acyl-carrier protein" /protein_id="YP_002983616.1" /db_xref="GI:241665257" /db_xref="InterPro:IPR006163" /db_xref="GeneID:8021372" /translation="MDSLKLEIKQLLIEALDLEDMTPADIDDDAPLFDTNGIGLDSID ALEIGIMLRKRYQLTIAANDEHTREHFRTVNTLAALVKSQQ" gene 241091..241336 /locus_tag="Rpic12D_3686" /db_xref="GeneID:8021373" CDS 241091..241336 /locus_tag="Rpic12D_3686" /inference="protein motif:PFAM:PF00550" /note="PFAM: phosphopantetheine-binding; KEGG: bxe:Bxe_A0929 acyl carrier protein" /codon_start=1 /transl_table=11 /product="phosphopantetheine-binding" /protein_id="YP_002983617.1" /db_xref="GI:241665258" /db_xref="InterPro:IPR006163" /db_xref="GeneID:8021373" /translation="MTDTEILERIRAIFKENFAIEPERVTLGAHLFEDLDLDSIDAVD LAIKLQEMTGRRIKPEEFKTVRTVNDVVGAVESLLAA" gene 241341..241979 /locus_tag="Rpic12D_3687" /db_xref="GeneID:8021374" CDS 241341..241979 /locus_tag="Rpic12D_3687" /inference="similar to AA sequence:KEGG:RS00790" /note="KEGG: rso:RS00790 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983618.1" /db_xref="GI:241665259" /db_xref="GeneID:8021374" /translation="MQAQSVDPTRPSTSQPRWLRGAAQTMLKIAYPLVLIGAWHVGAP RYAGMALLALLWIQRWIGAGSVSSLLRQLTPLDWLIAGVLTCTSAAVVITNSELVLRL YPALVNAGLLLSFAATLRSGPTMIEKFARMRMPDLQPRAVRYTRQVTQVWCVFFALNG ATAVIAALYWSRGAWALYNGVIAYVLVGALIVAEAAYRHWVIRPHARQPESA" gene 241976..243649 /locus_tag="Rpic12D_3688" /db_xref="GeneID:8021375" CDS 241976..243649 /locus_tag="Rpic12D_3688" /inference="protein motif:PFAM:PF00501" /note="PFAM: AMP-dependent synthetase and ligase; Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: rso:RS00787 hypothetical protein" /codon_start=1 /transl_table=11 /product="AMP-dependent synthetase and ligase" /protein_id="YP_002983619.1" /db_xref="GI:241665260" /db_xref="InterPro:IPR000873" /db_xref="InterPro:IPR013114" /db_xref="GeneID:8021375" /translation="MIALRAQLHEARPDDAVVCLDGAATMTYGMFHARVAAYAGAFTT QATTHYALCIEDPFDFACALFALFASGKHVVIPASAAPAYLESLGTAFDALVTDASLR SIDQHAEAVVGPIQPLAPITLYTSGSTGTPKPIHKTLAQFDAEVVTLEQQWGRQIGAG AMLASVPHHHIYGLLFRVFWPLAAGRPFCRQTHAEPAALQQALAQHPVAALVSSPAQL ARWPVLPRFDVLPALPAVFSSGGPLDATAAAAFAATHGSAPIEVFGSTETGGIAWRRQ DRTPAWQPFARVQIRQEDDGALAVRSPHLPHDNWHRTDDAIAFDDSGRFLLRGRLDRV VKVDGKRIALPEVEDWLASHPFVARAAVTLLAGASRERLGALVALTPAGVEGLRTLGR VSVAKTLRRHLSTYTDPTLIPRRWRFCMTMPVDARGKLPASVIAAAFRSGVEGFETLS HASDAEGDHYELRVSPDLIHFKGHFPGLPILPGVVLIDWIVRLAATRDRAVRAMTSID QLKFMAPVPPGAVVSLRIVHESERRRVRFTARTGARDCASGTLVYQEAA" gene 243646..245367 /locus_tag="Rpic12D_3689" /db_xref="GeneID:8021376" CDS 243646..245367 /locus_tag="Rpic12D_3689" /inference="protein motif:PFAM:PF00535" /note="PFAM: glycosyl transferase family 2; KEGG: rso:RS00785 hypothetical protein" /codon_start=1 /transl_table=11 /product="glycosyl transferase family 2" /protein_id="YP_002983620.1" /db_xref="GI:241665261" /db_xref="InterPro:IPR001173" /db_xref="GeneID:8021376" /translation="MKLRTAIVIPIYNHKDAIGDTVARLAVHGLPILIVDDGSDAPTQ AVLATLAQQYAGQISLLRLPVNGGKGAAVMAGLRAASAAGYTHALQIDADGQHDATDV PRFLAAATASPDAIILGRPVYDESVPKARLYGRYVTHVWVWIETLSFDIRDAMCGFRV YPLALACKLIDDVTLPTRMDFDIEILVRLHWRRARFVTLPTRVTYAPDGLSHFDVLWD NIRISKSHTRLVAGMLMRLPLLLAGRCMPRWRHPSAPGAAGGWWRMAERGSLFGMQCL ALSCRLFGTRFTSLWLYPIVAYFLLTGRAAREASQQYFARLHAVSPGTGTPRPGWLSA YRHMIAFAQSGLDKLAAWSGQVKSERVRFDDPSAFEALIASGRGALVIGAHLGNLEMT RALAARNGHAKVTAVVYTEHAQRFNHVLAQAHPDVVSHLMQVQDFGPATAMLMQERID AGELLVIVGDRVPAHESGRTVQARFLGSPAQFAQGPYVLAHALGCPVYLFFCLKTGQH HTLYFEPFAERIELPRAERTRHLGALAQRYAERLEHYCRKAPFQWFNFFDFWARPKAG NNMDAHG" gene 245360..246958 /locus_tag="Rpic12D_3690" /db_xref="GeneID:8021377" CDS 245360..246958 /locus_tag="Rpic12D_3690" /EC_number="4.3.1.3" /inference="protein motif:PRIAM:4.3.1.3" /note="PFAM: phenylalanine/histidine ammonia-lyase; KEGG: rso:RSp0365 histidine ammonia-lyase protein" /codon_start=1 /transl_table=11 /product="Histidine ammonia-lyase" /protein_id="YP_002983621.1" /db_xref="GI:241665262" /db_xref="InterPro:IPR001106" /db_xref="GeneID:8021377" /translation="MAEHDLNMPAQEGARSRLPAVVIGNRHLTIEDVVAIARDAHPVS LCADTAWRDRIERGAQFLRERLAAGATVYGVNTGYGDACQVSVPAALVEALPLQLTRY HGCGMGRHLEPAETLAVVAARLNSLAHGYSGVRHLLLQRLADLINHRILPRIPAEGSV GASGDLTPLSYVAAALVGERDVLFAGRQQPAADAWQQIGHAPITLAPKEGLALMNGTA VMTGLACLAYARAEHLIRLSARLTALATVALDGRAAHFHPTIFHAKPHAGQAEVAGWI RDDLAQWDDASAHRVQDRYSIRCAPHVIGVARDAQSWIRRDIENELNSANDNPLVDPD TKEILHGGNFYGGHIAFAMDALKTAVANLADLMDRQLALLVDDKFSNGLPRNLSGATA ERAPINHGFKAVQISSSAWTAEALKLTMPASVFSRSTEAHNQDKVSMGTIAARDCLRV LELTEQVAAAHTLAAVQAVRLRCRLDPSIQVPAPVQAFIARVGALSSFVTEDRPLESD LRTVALAIEQGRLGDEQGSHHDRT" gene 246945..247379 /locus_tag="Rpic12D_3691" /db_xref="GeneID:8021378" CDS 246945..247379 /locus_tag="Rpic12D_3691" /inference="protein motif:PFAM:PF03061" /note="PFAM: thioesterase superfamily protein; KEGG: rso:RS00778 hypothetical protein" /codon_start=1 /transl_table=11 /product="thioesterase superfamily protein" /protein_id="YP_002983622.1" /db_xref="GI:241665263" /db_xref="InterPro:IPR006683" /db_xref="GeneID:8021378" /translation="MTARDLPPLVASARVEVPFHDVDAMDVCWHGHYLKYFEIGRAAL LRCFHYDYREMRDSGFLWPVVEAHLKYIKPATYGQQIEVRATLMEYQNRLKIGYEIVD CASGMRLTKGHTTQVAVCARTGELQFVSPPVMVERVERAWPR" gene 247367..248023 /locus_tag="Rpic12D_3692" /db_xref="GeneID:8021379" CDS 247367..248023 /locus_tag="Rpic12D_3692" /inference="similar to AA sequence:KEGG:RS00776" /note="KEGG: rso:RS00776 putative signal peptide protein" /codon_start=1 /transl_table=11 /product="putative signal peptide protein" /protein_id="YP_002983623.1" /db_xref="GI:241665264" /db_xref="GeneID:8021379" /translation="MATLMGTVRAGCISLLLTTASTFAHSAPSATQQSSALVSQVAAQ LAQANGVRAQFVQTQSLQAMQRPLVSSGTLLFLREHGAIWRVEQPHRMTYVMTDAGVT TLDADDKPVARGARNAAGVAQVSRMMRAMLTGDLSALYSQFDVNAQGSVSRWHLRLIP AQPQLAQALRGLDLAGDTYVRSIRVQSANGDETRIEFTGSTRVEAPNAAERALLGAPR" sig_peptide 247367..247447 /locus_tag="Rpic12D_3692" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.764 at residue 27" gene 248020..250428 /locus_tag="Rpic12D_3693" /db_xref="GeneID:8021380" CDS 248020..250428 /locus_tag="Rpic12D_3693" /inference="similar to AA sequence:KEGG:RS00775" /note="KEGG: rso:RS00775 lipoprotein transmembrane" /codon_start=1 /transl_table=11 /product="lipoprotein transmembrane" /protein_id="YP_002983624.1" /db_xref="GI:241665265" /db_xref="GeneID:8021380" /translation="MTQQLAIRPSVQSAWAIRLGWLALVLAAVLYCAVRLHDGTALQT NLLALLPATEADPVAEQAVDTLAASLGDRTVFLLSSRDAEHAKAAAIHLGAQLKRSGA FRSVIAELPPFDAGQITRSYLPYRFGLLSAADRAALDRTSTALPRLLAQRLYAPVEAG LSAPLADDPFGWLGHWLADLPLATTRLELEDNFLVARRGDTISVLVAGTLAASAYDAQ TQATVRSAVAQAQHALAQTFPDVTLLRTGAVFYAAAARSASEHELHRIGILSMCGIAL LMLWVFRSPRFLLLGFLSTGIGTVCALATTLLLFGKLHLLTLVFGASLIGEAVDYSIQ YFVTHLGAEASHDARRSARDVRPALLVALATSLLGYAILAGVPFPALRQIACFAMAGI GAAYLSVATLLPALLLHAPRQPRRTYRRAARWLGAWQAALTSRSAWLCLALIAAAAVP GWLRLTSDDDIHLLIQRDPELAQQEAIVRETIGLEGSTQFFVVQGNSAEQVLQRAEAL QRKLEGPIAGAPIKGVQSVTQFVPSARQQAEDRARLGQRVFADRQALATALLDAGFRP EVAANYVDAFGGAQSGPLTVDAWLAMPWSQPYRHLWLGRVAQAQAPTYAAIVIPAGAT VAQLPALAALADGEAGIRFVDKPASVARLFAAYRVDSGWWLAGALVMVLVLFCVRYGP ANGARVTLPVVLAVGITFAAYGYAGMPLNLFHWLALMLVLGVGANYAVFLREGCARRH ADIGGVWVGVLLSAGTTLLSFGLLGASAMPVLRSFGMTLALGIVIAVALAPLGMPLIK NRHA" gene 250425..251606 /locus_tag="Rpic12D_3694" /db_xref="GeneID:8021381" CDS 250425..251606 /locus_tag="Rpic12D_3694" /inference="protein motif:PFAM:PF02801" /note="PFAM: Beta-ketoacyl synthase; KEGG: rso:RS00773 3-oxoacyl-(acyl carrier protein) synthase I" /codon_start=1 /transl_table=11 /product="Beta-ketoacyl synthase" /protein_id="YP_002983625.1" /db_xref="GI:241665266" /db_xref="InterPro:IPR014030" /db_xref="InterPro:IPR014031" /db_xref="GeneID:8021381" /translation="MMASPVYLHALGMVNALGDDVGAICLRLATGHAPGMLATHRPDG STAVVGRVLAPLEVRPPRQLSAYDCRNNRLLLAALAQIQAELDAAHARYGPHRIGIVL GTSTSGIDAAEVALRHAKTHGTLPEAFDYRQMEIGTLAPFAAAALGVTGPAYTVSTAC TSSAKAFASARRLLQLNLCDAVVVGGADSLCELTLQGFASLESTSATHTNPMSRNRAG INIGEGAAVFLMTREPGPVRLAGVGESSDAHHISAPDPTGAGAERALCAALADAGIEA DALGYVNLHATATRKNDEMEAHLMARVFPNGVPTSGTKPLTGHMLGAAGATELGFAWL ALARDGTPLPRHVWDGEADPTLPVLDLIENTRRLASGRYVMSNSFAFGGSNASLILGQ G" gene 251609..252082 /locus_tag="Rpic12D_3695" /db_xref="GeneID:8021382" CDS 251609..252082 /locus_tag="Rpic12D_3695" /inference="protein motif:PFAM:PF07977" /note="PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: rso:RS00772 hypothetical protein" /codon_start=1 /transl_table=11 /product="Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ" /protein_id="YP_002983626.1" /db_xref="GI:241665267" /db_xref="InterPro:IPR013114" /db_xref="GeneID:8021382" /translation="MTDAELCALPIESILPHRGSMLLLSRVDTWDEESIAAAADLDPA AWYADANGNMPAWIGIELMAQAIAAHVGLLSMREGKPARPGVLLGSRKYETSVPTFPP VQPLRVEARELLRSAEGHGAYACTISTAGQNLATAVIKVYQPTDFEAFIEGSLTT" gene 252079..252807 /gene="fabG" /locus_tag="Rpic12D_3696" /db_xref="GeneID:8021383" CDS 252079..252807 /gene="fabG" /locus_tag="Rpic12D_3696" /inference="protein motif:TFAM:TIGR01831" /note="TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rso:RSp0359 3-ketoacyl-(acyl-carrier-protein) reductase" /codon_start=1 /transl_table=11 /product="3-oxoacyl-(acyl-carrier-protein) reductase" /protein_id="YP_002983627.1" /db_xref="GI:241665268" /db_xref="InterPro:IPR002198" /db_xref="InterPro:IPR002347" /db_xref="InterPro:IPR011285" /db_xref="InterPro:IPR013968" /db_xref="GeneID:8021383" /translation="MSRRVLVTGASRGIGRAIAYQLASDGLDVSVHCRSGRNEADAVV ADIQAQGGSARVLQFDVRDRHACRTQLEADVEAHGAYYGIVLCAGVTRDAAFPALTEE DWDVVLETGLDGFYNVVHPLTMPMVRARKGGRIVTIASVSGVMGNRGQVNYSAAKAGL IGATKALAVELASRRITVNCVAPGLIETEMLSHVEHLDHALQTVPMNRVGQPAEVAAV VGFLMSDAASYVTRQVIGVNGGMI" gene 252807..254033 /locus_tag="Rpic12D_3697" /db_xref="GeneID:8021384" CDS 252807..254033 /locus_tag="Rpic12D_3697" /inference="protein motif:PFAM:PF02801" /note="PFAM: Beta-ketoacyl synthase; KEGG: rso:RSp0358 3-oxoacyl-(acyl carrier protein) synthase II" /codon_start=1 /transl_table=11 /product="Beta-ketoacyl synthase" /protein_id="YP_002983628.1" /db_xref="GI:241665269" /db_xref="InterPro:IPR014030" /db_xref="InterPro:IPR014031" /db_xref="GeneID:8021384" /translation="MRRVVITGMGGVTALGSAWSEIQSAIEQGRNAVRRMPEWDYFDT LHARLACPLPAFATPAEYPRKKTRSMGPVSVYAVRASELALADAGLAGDSSIADGRMG VAYGSSSGSVQPIRAFGSMLDTGSMQGVTSNSYVQMMPHTTAVNVALFWDLKGRIIPT SCACASGSQAIGYAYEAIATGKQTMMLAGGAEELSAPAVAVFDTLYATSTRNDAPHLT PRPFDKARDGLVVGEGAATLVLEDYDHARARGAHIHAEVVGFGCNSDGAHMTQPTAAT MGQAMRLALQDAALPQEAVGYVNAHGTSTELGDIAESQATADVFRPTMPISSLKSYIG HTLGACGAIEAWWTIEMMKRNWYAPTLNLENVDPACAPLDYIVGSARTLESDYVMSNN FAFGGINTSLIFKRAA" sig_peptide 252807..252869 /locus_tag="Rpic12D_3697" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.915) with cleavage site probability 0.869 at residue 21" gene 254033..255331 /locus_tag="Rpic12D_3698" /db_xref="GeneID:8021385" CDS 254033..255331 /locus_tag="Rpic12D_3698" /inference="protein motif:PFAM:PF02801" /note="PFAM: Beta-ketoacyl synthase; KEGG: rso:RSp0357 3-oxoacyl-[acyl-carrier-protein] synthase I" /codon_start=1 /transl_table=11 /product="Beta-ketoacyl synthase" /protein_id="YP_002983629.1" /db_xref="GI:241665270" /db_xref="InterPro:IPR014030" /db_xref="InterPro:IPR014031" /db_xref="GeneID:8021385" /translation="MLPSTSRTSTPRGLQERVVVTGLGIVSCLGNTLDGVAAALRDGR SGLSHMPAWRAMGLGSQVAGIASAQDEPPFARKVDRFMGETARLASHAARKALVDAGL DAASMHSPRAGIVAGSGTGALAAYDAALEMVRGRGVERASPYIVPQVMSSTVSANLAQ VFGVGGICYSPSSACTTSALAIGQAAQWIRSGLQDIMLAGGAEELHDSYALFFDAMGA LTHASADAPERASRPYDVARDGFVLASGAGILVLESLAHARARGARIYAELTGFGQST DAGSMVSPRAQGIARAIRDTLGEAHMPLDYINTHAPSTPAGDVEELLALRAVFGAKVP PFSSTKGLTGHPPGAAGVHEAIYTLLMMRDGFIAGSTGIEAADPAVGDMPLVRQTRSA RIERALSISFGFGGSCAGLMFDAANGESFTQQQQVQECSR" gene 255328..255762 /locus_tag="Rpic12D_3699" /db_xref="GeneID:8021386" CDS 255328..255762 /locus_tag="Rpic12D_3699" /inference="similar to AA sequence:KEGG:RS00762" /note="KEGG: rso:RS00762 putative signal peptide protein" /codon_start=1 /transl_table=11 /product="putative signal peptide protein" /protein_id="YP_002983630.1" /db_xref="GI:241665271" /db_xref="GeneID:8021386" /translation="MKNRLLLAASTLAMLTPAAHARTEVVTYPIQPVLQSQPFASGVA LYFGNQAHPAVLSTLGEVTKSAHPPRKTATQVEICNATLADALRQLANTAHDRGANAV INIKTSFHSNESNDETNYTCGVSSVSAALRVRGELVTVDPTK" sig_peptide 255328..255393 /locus_tag="Rpic12D_3699" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.993 at residue 22" gene 255820..256254 /locus_tag="Rpic12D_3700" /db_xref="GeneID:8021387" CDS 255820..256254 /locus_tag="Rpic12D_3700" /inference="similar to AA sequence:KEGG:Bphy_0706" /note="KEGG: bph:Bphy_0706 putative excinuclease, ATPase subunit" /codon_start=1 /transl_table=11 /product="putative excinuclease, ATPase subunit" /protein_id="YP_002983631.1" /db_xref="GI:241665272" /db_xref="GeneID:8021387" /translation="MKRHLMLAVLCAATMSTAFARNDVRTYPIDAALKSEGADKVGSD IALVFDGQQHAAVVKSMGEIATNKKTNGVGRSDEAACQHVFLSAVLTLQERAREMGGN AVINIKSNYKNNLTSSATDFTCGSGAIMSGVALKGEVVTLKK" sig_peptide 255820..255882 /locus_tag="Rpic12D_3700" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.996 at residue 21" gene complement(256299..257027) /locus_tag="Rpic12D_3701" /db_xref="GeneID:8021388" CDS complement(256299..257027) /locus_tag="Rpic12D_3701" /inference="protein motif:PFAM:PF08241" /note="PFAM: Methyltransferase type 11; UbiE/COQ5 methyltransferase; Methyltransferase type 12; putative methyltransferase; KEGG: rso:RS00761 hypothetical protein" /codon_start=1 /transl_table=11 /product="Methyltransferase type 11" /protein_id="YP_002983632.1" /db_xref="GI:241665273" /db_xref="InterPro:IPR003358" /db_xref="InterPro:IPR004033" /db_xref="InterPro:IPR013216" /db_xref="InterPro:IPR013217" /db_xref="GeneID:8021388" /translation="METTSTPAHVGSFIPETAFGVWFLRTHTWEHHVLRVAINDLRRL ITTPLPAAPVMVDVGCGQGISFRLLEQAFAPQRIVGVDCHAPSLDAAREAARAIGTPV DILQGDCAALPLPDACADIVFCHQTFHHLVEQERALAEFHRVLKPGGLLLFAESTDAY IKSWVIRLLFRHPMHVQKSADGYLQMLRAGGFHFEPRHVSLPYLWWSRAADFGLFERL GLHRPKPGKRRETLVNVAAVKPLA" gene 257179..258438 /locus_tag="Rpic12D_3702" /db_xref="GeneID:8021389" CDS 257179..258438 /locus_tag="Rpic12D_3702" /inference="protein motif:PFAM:PF01494" /note="PFAM: monooxygenase FAD-binding; tryptophan halogenase; FAD dependent oxidoreductase; KEGG: rso:RS00759 putative oxidoreductase protein" /codon_start=1 /transl_table=11 /product="monooxygenase FAD-binding" /protein_id="YP_002983633.1" /db_xref="GI:241665274" /db_xref="InterPro:IPR002938" /db_xref="InterPro:IPR006076" /db_xref="InterPro:IPR006905" /db_xref="GeneID:8021389" /translation="MRPDISNIEKHEHIDVAIIGAGPSGAVAAALLRKAGRNVLVLER QHFPRFSIGESLLPQSMAYLEQAGMLQAVVEAGFQYKNGAYFVHHDKSAAFDFRDKHS AGWGTTYQVERTTFDQVLIDCAVQQGAEVRFGHTVRAMHTGDAPVLEVEDEASQAYAV HARFVLDASGFGRVLPRLLNLQAPTGMPTRAALFSHVRDALPAGSTDRDKICIAVHPD RRDVWYWMIPLANGRSSVGCVAEASFLDVPEAEREATLRRLIQAEPNIGALIGDAPFL MPVRQIGGYSANVERLYGPGYALLGNAGEFLDPVFSSGVTIALRSAELAARTLVRQLD GKAVDWLADYDRPLRKGVDTFRAFVERWYTGELQDIIFHPRHSPGIRRMISAILAGYA WDETNPFVADPVRRLNTLHEVCRMEMA" gene complement(258486..259229) /locus_tag="Rpic12D_3703" /db_xref="GeneID:8021390" CDS complement(258486..259229) /locus_tag="Rpic12D_3703" /inference="protein motif:PFAM:PF06912" /note="PFAM: protein of unknown function DUF1275; KEGG: rso:RS00757 hypothetical protein" /codon_start=1 /transl_table=11 /product="protein of unknown function DUF1275" /protein_id="YP_002983634.1" /db_xref="GI:241665275" /db_xref="InterPro:IPR010699" /db_xref="GeneID:8021390" /translation="MPIQYLRRLTGTERTDDANRRLGQSLAFVAGAANAGGFLAVKQY TSHMSGIVSAMADDLVLGNAVLVLAGFASLLAFVCGAACTAVMVNWGRRRSTHSEFAL PLMLEAGLLLLFGLMGTSLGQYRVVFVPATVALLCFMMGLQNAIITKISKAEIRTTHV TGLATDIGIEIGKALYWNQGHRNLPAVVANRPKLRLLASLLAMFFVGGVTGALGFKHL GYAATIPLASILMLLAVVPVVDDLLARRR" gene complement(259292..260251) /locus_tag="Rpic12D_3704" /db_xref="GeneID:8021391" CDS complement(259292..260251) /locus_tag="Rpic12D_3704" /inference="protein motif:TFAM:TIGR02550" /note="TIGRFAM: flagellar hook-associated protein 3; KEGG: rso:RSp0352 flagellar hook-associated protein 3" /codon_start=1 /transl_table=11 /product="flagellar hook-associated protein 3" /protein_id="YP_002983635.1" /db_xref="GI:241665276" /db_xref="InterPro:IPR013384" /db_xref="GeneID:8021391" /translation="MRVSTAQFFALSSASMQNTQSNLLTLQQQLASGIALNSAGDNPS AFGQMAQLQQTQDANDQYQVNRDATDARLTNVSSALTNLVTTLQQGKQSMVGANTSLM TDSQRIGVLAQVKQQYQQLLSIANQRDPSGVALFGGANGTTDPFVSSGGSVQYVGTGQ PPTVQVSQNISMPNSVAGDSVFVRIPNTDPANPSANQSIFKTYENLITALSTPINAAT QATDVASLQKAVQTAQGNLDNAYQVALQAQVTVGTQQAQITTLNSSGSNYGEQLKEQI SKLQSVDYTSAISQFSQQQVSLQAAQKTFTAMQGMSLFQYINP" gene complement(260319..262256) /gene="flgK" /locus_tag="Rpic12D_3705" /db_xref="GeneID:8021392" CDS complement(260319..262256) /gene="flgK" /locus_tag="Rpic12D_3705" /inference="protein motif:TFAM:TIGR02492" /note="TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: rso:RSp0351 flagellar hook-associated protein FlgK" /codon_start=1 /transl_table=11 /product="flagellar hook-associated protein FlgK" /protein_id="YP_002983636.1" /db_xref="GI:241665277" /db_xref="InterPro:IPR001444" /db_xref="InterPro:IPR002371" /db_xref="InterPro:IPR010930" /db_xref="GeneID:8021392" /translation="MSSSLLNIGATGLRVADINLQVTGNNIANANTPGYSRQEAVQTE NIPLYAGVGYLGQGANVTTVKRIYDQFLTAQVQNGQAATSAADQLNSLLSGLSKYVSD SNSGLSSALTSFFNGADGLASNPSSTTARQVFLNGASGLQSRFNSIAGQLNALSGQVN TQVQTQISSVNGTAQQIAALNDQIAKAEASTGQPANDLRDQRDQLVQTLNQSIKASVV QTGDGQYNIYVGNGQALVQGNQSYQLTAVPSEYDPTQLSVGYKSPAGTVTIDDSQLGG GALGGLMDFRRNTLIPAQNSLGRLAAAVSADVNTQNKLGMDANGNLGTDLFSVAGPSV AASSNNTGSATLTASITNANAGQGYDYQVKYQGGAYTISHYPDGSASQTVTSWPTIID GVTLNLSGTMNSGDSFLVRPTADAAATMQTLTTDYHDVAAATPVVLTQGSNNTGSAAV SSLSVNSTYASSPLTSPISLTYSSAVGGSLSGFPSTVTVTANGTSTTYTGGTAPYTQG ATYVFNGVQMTLSGTPGNGDTFTISANTANSTDNGNASALASLRNATLLDGGTASIGT AWNSLVTQVGVQANTAGTNLTSQKALLASSTSQQQSVSGVNLDDEAMNLMKYQQAYQA AAKVMQTANSLFDSLLSIANG" gene complement(262372..263457) /locus_tag="Rpic12D_3706" /db_xref="GeneID:8021393" CDS complement(262372..263457) /locus_tag="Rpic12D_3706" /inference="protein motif:TFAM:TIGR02541" /note="KEGG: rso:RSp0350 flagellar protein FlgJ; TIGRFAM: flagellar rod assembly protein/muramidase FlgJ; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; SMART: Lysozyme subfamily 2" /codon_start=1 /transl_table=11 /product="flagellar rod assembly protein/muramidase FlgJ" /protein_id="YP_002983637.1" /db_xref="GI:241665278" /db_xref="InterPro:IPR000423" /db_xref="InterPro:IPR002901" /db_xref="InterPro:IPR013338" /db_xref="InterPro:IPR013377" /db_xref="GeneID:8021393" /translation="MNPTDLTGRLALDSKGFESLKQAARTDPTGAAKTVAKQFDAIFV NMMLKQMRDASPQTGLLDSSSSKMYTSMLDQQLSQTMAARGVGVADQLLKQMLRQANR VNPDAGGPVNTALSGTTATNTALPGAGGSATDAAKAIARSSLNSMAASAASGVEDDGS GISTVPRPGLEARVQRALAALRKQAEAESNTASAPPDVDLSTVASEPRGERMTSFYNK LIGHATQAAQETGIPANFMIGHAALESGWGRREIHAKDGSNTHNLFGIKAGGSWTGKT AEVTTTEYIGGVAHKVKEKFRAYGSYAEAFKDYANLLANNPRYSHVVAAGNGNDAASF AKGLQRAGYATDPNYANKIMAVLRQIV" gene complement(263474..264592) /gene="flgI" /locus_tag="Rpic12D_3707" /db_xref="GeneID:8021394" CDS complement(263474..264592) /gene="flgI" /locus_tag="Rpic12D_3707" /inference="protein motif:PFAM:PF02119" /note="PFAM: flagellar P-ring protein; KEGG: rso:RSp0349 flagellar basal body P-ring protein" /codon_start=1 /transl_table=11 /product="flagellar P-ring protein" /protein_id="YP_002983638.1" /db_xref="GI:241665279" /db_xref="InterPro:IPR001782" /db_xref="GeneID:8021394" /translation="MNLHRIIGAALVALSAISAVVPTTAHADRIKDLTTVAGVRDNAL IGYGLVVGLDGSGDQTTQTPFTIQSFNNMLTQFGINVPAGASIQLKNTAAVVVTATLP AFVRPGQTIDVTVSSIGNAKSLRGGTLLLTPLKGVDGQLYALAQGNVVIGGAGAAANG SKVQINQLGAGRIANGATVERAVQASVGEAGSIQLDTGTTDFGTVQNIVNAINKQFGM DTAQAADGRTINVRAPALASDRVGFVAKLQNIEVTPALAAARVVVNARTGSVVMNQLV KLEPCAVAHGNLSVTISTEPVVSQPAPFSQGQTVAAARSNIEVKQQGGSLINVKGGTN LADVVKAINAIGANPQDLISILQAMKAANALRADLEII" sig_peptide complement(263474..263557) /gene="flgI" /locus_tag="Rpic12D_3707" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.940 at residue 28" gene complement(264603..265346) /locus_tag="Rpic12D_3708" /db_xref="GeneID:8021395" CDS complement(264603..265346) /locus_tag="Rpic12D_3708" /inference="protein motif:PFAM:PF02107" /note="PFAM: flagellar L-ring protein; KEGG: rso:RSp0348 flagellar L-ring protein precursor" /codon_start=1 /transl_table=11 /product="flagellar L-ring protein" /protein_id="YP_002983639.1" /db_xref="GI:241665280" /db_xref="InterPro:IPR000527" /db_xref="GeneID:8021395" /translation="MHTPPVYSPTHSGRAVSPLRMVRLAVLGTAALLATACGMLPPPA PIVQGPTTARPPMPVMAPRQNGAIYQEVASGSGGFRGMFEDRRAHMVGDTITIVITEN TAASKQTSGSVNRTGSMSASVPTFAGMNAGVLSLLGVSASDANKFDSKGANGAQNNFT ATITVTVVEVLSNGNLVVSGEKQMAVGQGTESIKFSGVVNPTTVNNQNTVLSTQVADA RMEYRGTGYVAESQQMGWLSRFFLTVSPF" gene complement(265380..266162) /locus_tag="Rpic12D_3709" /db_xref="GeneID:8021396" CDS complement(265380..266162) /locus_tag="Rpic12D_3709" /inference="protein motif:TFAM:TIGR02488" /note="TIGRFAM: flagellar basal-body rod protein FlgG; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: rso:RSp0347 flagellar basal-body rod protein FlgG" /codon_start=1 /transl_table=11 /product="flagellar basal-body rod protein FlgG" /protein_id="YP_002983640.1" /db_xref="GI:241665281" /db_xref="InterPro:IPR001444" /db_xref="InterPro:IPR010930" /db_xref="InterPro:IPR012834" /db_xref="GeneID:8021396" /translation="MIRSLWISKTGMDAQQSQLDVISNNLANVNTTGFKRSRAVFEDL LYQNVREPGAQSSQQTTLPSGMQIGTGVRIVATERLHTQGNLQQTGNATDVAINGNGF FQVQMPDGTLAYTRDGSFQVNAQGQLVTSSGYPIQPAITVPQNATSFSVGKDGVVTVT TPGSVNNTQVGTFQLANFINPAGLRSMGENLYAETEASGTANLANPGSNGVGVLNQNY VETSNVNVVEEMVNMIQTQRAYEINSKSVQTSDQMLEKLSQL" gene complement(266199..266936) /locus_tag="Rpic12D_3710" /db_xref="GeneID:8021397" CDS complement(266199..266936) /locus_tag="Rpic12D_3710" /inference="protein motif:TFAM:TIGR02490" /note="TIGRFAM: flagellar basal-body rod protein FlgF; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: rso:RSp0346 flagellar basal-body rod protein FlgF" /codon_start=1 /transl_table=11 /product="flagellar basal-body rod protein FlgF" /protein_id="YP_002983641.1" /db_xref="GI:241665282" /db_xref="InterPro:IPR001444" /db_xref="InterPro:IPR010930" /db_xref="InterPro:IPR012836" /db_xref="GeneID:8021397" /translation="MDRSIYVSMTGVKHLFDQQAASANNLANASTTGFKAQIDAFHTV GVQGDGSPTRSFVMASAIGTDVTPGPIETTGRALDVAIDGQGYFAVQAPDGTEAYTRA GTFQLNPDGTIVTLSGQPVMGDGGPITLPPNTTVQFAKDGTVNAISADNVTPPVSLGR LKLVSIDPSNLDRGTDGLFRQRDGQDADVNENVRITPGALEGSNVNLTDSLVNMIEIS RQLEMQMKSLQTSDTNAQSANELLRHA" gene complement(266966..268174) /gene="flgE" /locus_tag="Rpic12D_3711" /db_xref="GeneID:8021398" CDS complement(266966..268174) /gene="flgE" /locus_tag="Rpic12D_3711" /inference="protein motif:PFAM:PF06429" /note="PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; flagellar basal body rod protein; KEGG: rso:RSp0345 flagellar hook protein FlgE" /codon_start=1 /transl_table=11 /product="protein of unknown function DUF1078 domain protein" /protein_id="YP_002983642.1" /db_xref="GI:241665283" /db_xref="InterPro:IPR001444" /db_xref="InterPro:IPR010930" /db_xref="InterPro:IPR011491" /db_xref="GeneID:8021398" /translation="MGFQQGLSGLDAASKNLDVIGSNVANANTVGYKKSTAEFGDVYA RSLVGASDNQVGQGVEVTRVSQSFTQGNVTITGNPLDIAINGTGFYRMVDTASGQVSY SRNGQFQTDKNGYIISATGQNLTGYGVDSTGKVNTAVLTNLQIPVNDLAPLATTNTAF GINLDAAATAPTTTPFSPTNSATFNHSVSEQVYDGTGTAHMLTNYYVRTATGWDVYSQ VDGNNPTGGNPVTTLTFNSNGQLTSTPSKIAVSFAGMSIASMDFTGTTQYGGGYNDTA PGVTQDGYATGRLASYSVGTDGTITARYSNGRTATLGQIAMANFKAPEGLQNIGGNQW VETSNSGAPNLGTPGMGSFGLLQSSAVEQSNVDLSQELVNMIIAQRSYQANAQTIKTQ DTILQTLVTM" gene complement(268214..268861) /locus_tag="Rpic12D_3712" /db_xref="GeneID:8021399" CDS complement(268214..268861) /locus_tag="Rpic12D_3712" /inference="protein motif:PFAM:PF03963" /note="PFAM: flagellar hook capping protein; KEGG: rso:RSp0344 basal-body rod modification protein FlgD" /codon_start=1 /transl_table=11 /product="flagellar hook capping protein" /protein_id="YP_002983643.1" /db_xref="GI:241665284" /db_xref="InterPro:IPR005648" /db_xref="GeneID:8021399" /translation="MTVTSATSTPSTNTSNNLSITSGTDLQNTFMQLLVAQLQNQDPL NPMDNSQMTSQLAQINTVNGIQQLNTTMSSMATQNAATQASSLIGRTVQVPSSTLTLA SGSANFGISVPNGADDVVVTIKDASGNTVRKVDLGGMSAGSGNYTWNGKNDSGTSVAD GTYSISVSATLGGKAATANALGADKVTGVTITNGTTQLQLASGNTAKLSDITTIQ" gene complement(268899..269306) /locus_tag="Rpic12D_3713" /db_xref="GeneID:8021400" CDS complement(268899..269306) /locus_tag="Rpic12D_3713" /inference="protein motif:TFAM:TIGR01395" /note="TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: rso:RSp0343 flagellar basal-body rod protein FlgC" /codon_start=1 /transl_table=11 /product="flagellar basal-body rod protein FlgC" /protein_id="YP_002983644.1" /db_xref="GI:241665285" /db_xref="InterPro:IPR001444" /db_xref="InterPro:IPR006299" /db_xref="InterPro:IPR010930" /db_xref="GeneID:8021400" /translation="MSLFKVMDVAGSALTAQSKRMNVVASNLANAESVTGPNGTAYRA KQVVFTPVQESDDYATGVSVDRVVEDTVTPMKRMHQPGNPLADADGYVTMPNVDVVDE MVNMISASRSYQANVEVANTTKTMAAKALTLGQ" gene complement(269464..269919) /locus_tag="Rpic12D_3714" /db_xref="GeneID:8021401" CDS complement(269464..269919) /locus_tag="Rpic12D_3714" /inference="protein motif:TFAM:TIGR01396" /note="TIGRFAM: flagellar basal-body rod protein FlgB; PFAM: flagellar basal body rod protein; KEGG: rso:RSp0342 flagellar basal-body rod protein FlgB" /codon_start=1 /transl_table=11 /product="flagellar basal-body rod protein FlgB" /protein_id="YP_002983645.1" /db_xref="GI:241665286" /db_xref="InterPro:IPR001444" /db_xref="InterPro:IPR006300" /db_xref="GeneID:8021401" /translation="MVDKLDQLFGFQEQALRLRSQRHQILASNIANADTPNYKARDFD FQSALQKAVGQQSGNSLPMTATAAGHLTVDGAPAGEVALMQASLSQQTKALQGEVQYR TSQQPSIDGNTVDMDGERMRFADNTVRYEADLNIVTQKIKSMLAAIQSS" gene 270315..271190 /gene="flgA" /locus_tag="Rpic12D_3715" /db_xref="GeneID:8021402" CDS 270315..271190 /gene="flgA" /locus_tag="Rpic12D_3715" /inference="protein motif:TFAM:TIGR03170" /note="TIGRFAM: flagella basal body P-ring formation protein FlgA; PFAM: SAF domain protein; KEGG: rso:RSp0341 flagellar basal body P-ring biosynthesis protein FlgA" /codon_start=1 /transl_table=11 /product="flagella basal body P-ring formation protein FlgA" /protein_id="YP_002983646.1" /db_xref="GI:241665287" /db_xref="InterPro:IPR013974" /db_xref="InterPro:IPR017585" /db_xref="GeneID:8021402" /translation="MSTRFARSAHPPTRSGAMAVRPAARGRGMLAVLALALLASLAHP ILARAQGMVRVGYPPAAANLHTPAQGIQPATTTIQGPNAIQMQIQQQLQSQLDILGGT NDAGAPRASVEVGPVDPRIANQPCDQIDLMLPAANRLRGRIQVGVRCRSPHAWAAWVP ATIQITGTYYVASHQLSPGKTLDMGDLEARTGDLSMLPPSVVQQPADVVGRVLVTSVA ANQPLRAESLRLPIAVQAGQTVKLVAEGGGFQVTSDGRALNQAAVGQVAQVRTANGNV VSGIAQSVGVVAIQF" sig_peptide 270315..270464 /gene="flgA" /locus_tag="Rpic12D_3715" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.959) with cleavage site probability 0.520 at residue 50" gene 271302..271622 /locus_tag="Rpic12D_3716" /db_xref="GeneID:8021403" CDS 271302..271622 /locus_tag="Rpic12D_3716" /inference="protein motif:PFAM:PF04316" /note="PFAM: Anti-sigma-28 factor FlgM family protein; KEGG: rso:RSp0340 negative regulator of flagellin synthesis (anti-sigma-28 factor) protein" /codon_start=1 /transl_table=11 /product="anti-sigma-28 factor, FlgM" /protein_id="YP_002983647.1" /db_xref="GI:241665288" /db_xref="InterPro:IPR007412" /db_xref="GeneID:8021403" /translation="MKINHIVNNAPAAVPTKDATSGSTRAASTTPASTAASGSARHSG DTPSLSVQRVSRQVGSGDFDAARVEQIRSAIQSGTLKMDAGKIADAALSAAQSLLSTR SKKV" gene 271744..272205 /locus_tag="Rpic12D_3717" /db_xref="GeneID:8021404" CDS 271744..272205 /locus_tag="Rpic12D_3717" /inference="protein motif:PFAM:PF05130" /note="PFAM: FlgN family protein; KEGG: rso:RSp0339 flagella synthesis protein FlgN" /codon_start=1 /transl_table=11 /product="FlgN family protein" /protein_id="YP_002983648.1" /db_xref="GI:241665289" /db_xref="InterPro:IPR007809" /db_xref="GeneID:8021404" /translation="MDNTLLIRTLADEQELLRAATQTLEAEAQALRDGDMAELERITQ TKQKQLTALGEADRERRLWWAQHGGADPYGLVKYLRSDDTASRLFDENLALARTLRQR NIENGTLIDLRLRATQNALSVLHAANNGGGTPYGRDGKQPLSMPRFSVVAQ" gene 272659..273354 /locus_tag="Rpic12D_3718" /db_xref="GeneID:8021405" CDS 272659..273354 /locus_tag="Rpic12D_3718" /inference="protein motif:PFAM:PF00196" /note="PFAM: regulatory protein LuxR; LexA DNA-binding domain protein; SMART: regulatory protein LuxR; KEGG: rso:RSp0338 negative regulator of exopolysaccharide production transcription regulator protein" /codon_start=1 /transl_table=11 /product="two component transcriptional regulator, LuxR family" /protein_id="YP_002983649.1" /db_xref="GI:241665290" /db_xref="InterPro:IPR000792" /db_xref="InterPro:IPR001789" /db_xref="InterPro:IPR006199" /db_xref="GeneID:8021405" /translation="MKSIVVEAHPLVRAGATHVLQSLPAISEVVSVEPDETLFENLAA HGDAELALVGLPIPGIDDVPALSRLLQQPHPRHIAVLGETDSAAHVRALMQLNVSAYL LKSYSGKLIAAALELVLAGGRYVPASVVLARPEAIAAASPGGNNDCAMLGLTQRQYEI LVLLSRGHPVKTISRMLGISEATAKAHINALYRRLEVRSRTEAVFVATQRGAMLLNHP QLAEPPLRLARTG" gene complement(273467..274525) /locus_tag="Rpic12D_3719" /db_xref="GeneID:8021406" CDS complement(273467..274525) /locus_tag="Rpic12D_3719" /inference="protein motif:PFAM:PF00267" /note="PFAM: porin Gram-negative type; KEGG: rso:RS00714 porin precursor transmembrane protein" /codon_start=1 /transl_table=11 /product="porin Gram-negative type" /protein_id="YP_002983650.1" /db_xref="GI:241665291" /db_xref="InterPro:IPR001702" /db_xref="GeneID:8021406" /translation="MQFKRRFKLAVLAAAALTAGAAQAQSSVTLYGQVDAWAGATKNF GQDRAWGVNSGGMSTSYWGMRGSEDLGNGLKAIFTLEAFFRPDTGKAGRFDGDHFFAR NSFVGLESNTWGSVKLGRNTPPYFVSTILFNPFIDSYTFSPMVFHTYLGNGRTGAAGI SGLVGDSGWDNSIMYSTPDMGGLTANLIYGAGEQAGHNGQNKWGGSLLYFRGNFAATA AFQQVRFDGAPGDLNSLVAGFARQTAGQLGATYDFGVVKLYGQYQYIKNTISTGDAKS NGGQLGVSIPVGPGSVLASYAYTKTTGAADVKRNTWAVGYDYSLSKRTDVYAAYFRDK VSDLSSADTFGVGVRAKF" sig_peptide complement(273467..273541) /locus_tag="Rpic12D_3719" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.991 at residue 25" gene complement(274786..275514) /locus_tag="Rpic12D_3720" /db_xref="GeneID:8021407" CDS complement(274786..275514) /locus_tag="Rpic12D_3720" /inference="protein motif:PFAM:PF07702" /note="PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: rso:RS00713 transcription regulator protein" /codon_start=1 /transl_table=11 /product="transcriptional regulator, GntR family" /protein_id="YP_002983651.1" /db_xref="GI:241665292" /db_xref="InterPro:IPR000524" /db_xref="InterPro:IPR011663" /db_xref="GeneID:8021407" /translation="MTPRLPKYLELADRIRLDILHGALPAGSVAPSENEVALRYGVSR LTARRTLNELAARGLLKRSRGQRSVVLDRVGPHRPVLYAPGQSDAALEYTPGAVYTVS AFRLEPADHTVAAALGLEPGAQVAFVERRAQVGGQPVMLLRTWLTSRLAAMLEARDFE DRLFVQVFQRANLTIARSREAPLACVADAHQAAQLDVKAGVPLVRVRRIGYSVADMPI SLTYCDFSPDRYTREVDIRVLQND" gene complement(275636..275926) /locus_tag="Rpic12D_3721" /db_xref="GeneID:8021408" CDS complement(275636..275926) /locus_tag="Rpic12D_3721" /inference="protein motif:PFAM:PF00816" /note="PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS; KEGG: rso:RS00711 putative HNS-like transcription regulator protein" /codon_start=1 /transl_table=11 /product="histone family protein nucleoid-structuring protein H-NS" /protein_id="YP_002983652.1" /db_xref="GI:241665293" /db_xref="InterPro:IPR001801" /db_xref="GeneID:8021408" /translation="MATYKELIAQKAKLEEQIETARAKELETVIQQVRQTVAEYGLTV EDLGLAPRRGRRAGAKAPVPPKYRDPKTGATWSGRGRAPAWIGKNRDKFLIA" gene 276861..279515 /locus_tag="Rpic12D_3722" /db_xref="GeneID:8021409" CDS 276861..279515 /locus_tag="Rpic12D_3722" /inference="protein motif:TFAM:TIGR00254" /note="KEGG: rso:RS00710 hypothetical protein; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein" /codon_start=1 /transl_table=11 /product="diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)" /protein_id="YP_002983653.1" /db_xref="GI:241665294" /db_xref="InterPro:IPR000014" /db_xref="InterPro:IPR000160" /db_xref="InterPro:IPR001633" /db_xref="InterPro:IPR013656" /db_xref="InterPro:IPR013767" /db_xref="GeneID:8021409" /translation="MQDELSYPLSAQSLPVPLYVVLEGRIVYANAAGVCIVRARSADE LLGEPFSRFFLDAPTSPAAPGTVEAHAIAPEVAATPAARLASVRSPEASTEPVTVRLT VTPTRFDGLPAQQVVVHGLPMPLDAQLPGKPAERVLSAEAIGAALPHEHLDHLLSTLP SAASLGERLHAVLRALEAALPDVLCVVVRVVSGRARLYGTQGARVQLARRGEATAPEV DIELARVAPLLGALAPIELIRLSNAPTALRETLTCALGIALPAWLCRIPAQPRDMSMG DDLLCLFYAAPARLTPDDAILRSACAHYTSALVKLLRLESEYRQARDLRDQYRLVVNH LSEGVLTLSTDGRVLSYNRSAAQILHLTGTSWKGRPRMSLSDMVFGEDGAILPRAAWP TTLAARTGRAISNVVVGVPAGNGQIVWLRESVLPMFSPDSASPHAVLVIFTDITAERS TYEQLRLLETKDSLTGLPNRAAFIERLDARLALPSTGQSALLYVGLDHFKTVNEAMGH HIGNQVLNVAAQRIRAEAGQRALVARLGGDQFSVAIDDPDAADALALQVLGALAKPFA GGEREVHLSASIGIAVFPEDGGDASTLVSRAEAAMYRAKENGRNRVTRYSRALETQIL RRFTLNERMRRALARGQVRLVYQPKYALASGELVAVEALMRWSDPELGAVSPTEFIAV AEESGYILELGRWALMQACARGQAWERNFGFTGRISVNVSARQCDAGVIERDVDEALK ASGLTPSRLELELTESVLLADRLSTQRLLTSLAARGVRISLDDFGIGFSSLSYLRSLP IHNIKIDRSFISGVPAVADCVVLTKTIIAMARALNMTVTAEGVETPEQSAFLAAHACD EVQGFLFGRPLEVPALESLLRTHSRAQA" gene complement(279561..279764) /locus_tag="Rpic12D_3723" /db_xref="GeneID:8021410" CDS complement(279561..279764) /locus_tag="Rpic12D_3723" /inference="similar to AA sequence:KEGG:RSp0333" /note="KEGG: rso:RSp0333 putative osmotically inducible lipoprotein B2 transmembrane" /codon_start=1 /transl_table=11 /product="putative osmotically inducible lipoprotein B2 transmembrane" /protein_id="YP_002983654.1" /db_xref="GI:241665295" /db_xref="GeneID:8021410" /translation="MVRVLTILLAGATLLTATGCADMTARQRNTALGAGIGGLAGAAL IGGPGATLGGAALGGLVGNVSTR" sig_peptide complement(279561..279626) /locus_tag="Rpic12D_3723" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.982) with cleavage site probability 0.900 at residue 22" gene complement(280242..281828) /locus_tag="Rpic12D_3724" /db_xref="GeneID:8021411" CDS complement(280242..281828) /locus_tag="Rpic12D_3724" /inference="protein motif:PFAM:PF00463" /note="PFAM: isocitrate lyase and phosphorylmutase; KEGG: bcj:BCAM1588 putative lyase" /codon_start=1 /transl_table=11 /product="isocitrate lyase and phosphorylmutase" /protein_id="YP_002983655.1" /db_xref="GI:241665296" /db_xref="InterPro:IPR000918" /db_xref="GeneID:8021411" /translation="MAQYQDDIKAVADVKETYGSAWNAINPEYAARMRAQNKFKTGLD IAKYTAKIMRADMAAYDADPAKYTQSLGCWHGFIGQQKMISIKKHFKSTERRYLYLSG WMVAALRSEFGPLPDQSMHEKTSVSALIRELYTFLRQADARELGGLFRELDAAKDAAA KAAIQEKIDNHVTHVVPIIADIDAGFGNAEATYLLAKQFIEAGACCIQIENQVSDEKQ CGHQDGKVTVPHEDFLAKIRAIRYAFLELGVDDGIIVARTDSLGAGLTKQIAVTNTPG DLGDQYNSFLDCEELSADQLGNGDVVIKRDGKLLRPKRLPSNLFQFRAGTGEARCVLD CITSLQNGADLLWIETEKPHIGQIGGMVKEIRKVIPNAKLVYNNSPSFNWTLNFRQQV YDAMKEAGKDVSAYERGQLMSAEYDDSELAKLADEKIRTFQADASREAGIFHHLITLP TYHTAALSTDNLAKEYFGDQGMLGYVAGVQRKEIRQGIACVKHQNMSGSDIGDDHKEY FSGEAALKAAGKDNTMNQFH" gene complement(282337..282933) /locus_tag="Rpic12D_3725" /db_xref="GeneID:8021412" CDS complement(282337..282933) /locus_tag="Rpic12D_3725" /inference="similar to AA sequence:KEGG:RS05439" /note="KEGG: rso:RS05439 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983656.1" /db_xref="GI:241665297" /db_xref="GeneID:8021412" /translation="MALRPVVGVLLAAGRGSRFDPTGVANKLMAPLPDGTPVAVQAAR HLKQALGDVVAVVPAAATHGAQVELLAGLLAEAGCEVVFCADAARGMGASLAAGVAAR PEAGGWVIALADMPWIAPGTIAEIARAVDASHCVAPFHAGQRGHPIGFGAAFFAGLTS LDGDEGARRLIHPGTLIRINTNDAGTLRDIDTPADLAR" gene complement(282933..283367) /locus_tag="Rpic12D_3726" /db_xref="GeneID:8021413" CDS complement(282933..283367) /locus_tag="Rpic12D_3726" /inference="protein motif:PFAM:PF02566" /note="PFAM: OsmC family protein; KEGG: rso:RS05440 organic hydroperoxide resistance protein" /codon_start=1 /transl_table=11 /product="OsmC family protein" /protein_id="YP_002983657.1" /db_xref="GI:241665298" /db_xref="InterPro:IPR003718" /db_xref="GeneID:8021413" /translation="MALNILYTAHATATGGRNGHTQTEDGQVSHNLSVPKSMGGPGKP DTTTPEDLFAAGYAACFGSACDFVAKSMLKLNPSNIEIHCDVGIGTRPEGGFGLKVGL TARISGLSHGDAEALVAKAHEVCPYSNATRNNVEVTLKTEVV" gene complement(283487..285730) /locus_tag="Rpic12D_3727" /db_xref="GeneID:8021414" CDS complement(283487..285730) /locus_tag="Rpic12D_3727" /inference="protein motif:PFAM:PF02738" /note="PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: rso:RS05441 dehydrogenase, large chain oxidoreductase protein" /codon_start=1 /transl_table=11 /product="aldehyde oxidase and xanthine dehydrogenase molybdopterin binding" /protein_id="YP_002983658.1" /db_xref="GI:241665299" /db_xref="InterPro:IPR006311" /db_xref="InterPro:IPR008274" /db_xref="GeneID:8021414" /translation="MRIRNLEALAGGGAQQQPALADARAATLDRRSFLKLTTLAGGGL ALGIAPVLVGAQDAKAKPPSPPQAFIIIAPDNTVTVAVNRLEFGQGVHTALPMALAEE LDVDWRNVRGVLAPAADAYKDPGFGIQMTGGSTALNHSFQQYRELGARARAMLISAAA ERWKVDPSTCRTANGVVTSGSHRATYGELAQAAMALPVPAQVTLKNPSQFRIVGKPTP RLDARAKLDSSLKFGLDTRLPNMKVAVLARPPRFGGKVAKYDAAAAKAVKGVVDVLQI PTDRGGTGVAVIADGYWPAKQGRDALQVTWEDAGSKVSTPALMEEYKKLAGQPGTVAR AADVSAIPSAATRIQAEYEFPYLAHAPMEPLNCTIDVQQDGGKISGAKVWVGSQFQTI DQGAIAKVLGVSPEKVELNTMMAGGGFGRRAIPTSDYVVEAANVAKACAAAGHNGPVK VIWSREDDIRGGYYRPMHLHRVNVGVDNSGKVVGWDHVIVGQSILKGTPFEAFMVKNG VDETMVEGVIENDYGFPMQLTVHHPNVDVPVLWWRSVGHTHTAYVMETMVDEVAHAAK QDPVAFRLARFTGKEHERHRAALQLAVDKSGYGKRKLPKGQAWGVAVHASFESVIAYV VEVSVDQGKPRVHRVTAGVHANRVVNPMGAEAQIQGACVFGLAMIQPGFAIDIENGAT KNSNFTDYPPVRMPDAPPVNVFFVPSEDNPTGLGEPGTPPIAPAVANAVFALTGKRLR KLPFDTV" gene complement(285750..286208) /locus_tag="Rpic12D_3728" /db_xref="GeneID:8021415" CDS complement(285750..286208) /locus_tag="Rpic12D_3728" /inference="protein motif:PFAM:PF01799" /note="PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: rso:RS05442 dehydrogenase, small chain oxidoreductase protein" /codon_start=1 /transl_table=11 /product="(2Fe-2S)-binding domain protein" /protein_id="YP_002983659.1" /db_xref="GI:241665300" /db_xref="InterPro:IPR001041" /db_xref="InterPro:IPR002888" /db_xref="InterPro:IPR006058" /db_xref="GeneID:8021415" /translation="MVTLNVNGKPVEVDADPSTPLLWALRDNLGLTGTKFGCGVASCG ACTVHLNGQPTRSCVLPISAVVGQQITTSEHIADDKIGKAVLDAWVKHDVAQCGYCQS GQMMSAVGLLRTKKKPTDADIDSAMAGNLCRCATYQRIRAAIHDAAKSLA" gene 286854..288566 /locus_tag="Rpic12D_3729" /db_xref="GeneID:8021416" CDS 286854..288566 /locus_tag="Rpic12D_3729" /inference="protein motif:TFAM:TIGR00970" /note="TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: rso:RSp0322 2-isopropylmalate synthase" /codon_start=1 /transl_table=11 /product="2-isopropylmalate synthase" /protein_id="YP_002983660.1" /db_xref="GI:241665301" /db_xref="InterPro:IPR000891" /db_xref="InterPro:IPR002034" /db_xref="InterPro:IPR005668" /db_xref="InterPro:IPR013709" /db_xref="GeneID:8021416" /translation="MLKNPATKYRPFPAIALADRTWPNKTITRAPIWMSTDLRDGNQA LFEPMNAERKMRMFKMLVQIGFKEIEAAFPAASQTDFDFVRELIEGGHIPDGVAIEVL TQAREDLIRRTMESLRGAKRAIIHVYNATAPVFRRTVFNTDREGVKRIAVQSAKLIRE IAQTMPETQWTYQYSPEVFSGTELDFALEVCNAVTEVWEPTPEHKIIFNLPATVEMAT PNIYADQIEWMHRNLARRDSIILSVHPHNDRGTAVAAAELAVMAGADRVEGCLFGNGE RTGNVDIVTLALNLYSQGVDPELDFSHINDVARTCEDCTQLPVHPRHPYVGDLVFTAF SGSHQDAIKKGFAVQKPDAPWEMPYLPIDPADVGRTYDSIIRVNSQSGKGGIAYLLES GYGVAMPRRLQVEFSSTVQKLTDASGREATGADIWALFQQTYLRSDGAIGYVSHRLTE RDDGSQHIRLVVNIDDHEHICEGSGNGPLDALVHALSHVLTAPVSIHHYEERALGQGA NADAIAFAELAATGVAGSVFGVGVDANLTTASIRAVVGGVNRLIARTGQGMLRRSSAQ ATVA" gene 288694..289080 /locus_tag="Rpic12D_3730" /db_xref="GeneID:8021417" CDS 288694..289080 /locus_tag="Rpic12D_3730" /inference="protein motif:PFAM:PF03860" /note="PFAM: protein of unknown function DUF326; KEGG: rso:RS05446 hypothetical protein" /codon_start=1 /transl_table=11 /product="protein of unknown function DUF326" /protein_id="YP_002983661.1" /db_xref="GI:241665302" /db_xref="InterPro:IPR005560" /db_xref="GeneID:8021417" /translation="MTNRPTAKENAKRFASVVQALQACENACNHCATECNKNGHAEAM ARCISVCTDCAQYCAVTRAFLERNSEFAELLLEDCAEICSQCAEACDHHDQGHCTACA AACRACLDACLKVAGVEAVTTEPTVF" gene 289098..289580 /locus_tag="Rpic12D_3731" /db_xref="GeneID:8021418" CDS 289098..289580 /locus_tag="Rpic12D_3731" /inference="protein motif:TFAM:TIGR02047" /note="KEGG: rso:RS05447 transcription regulator protein; TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator; PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR" /codon_start=1 /transl_table=11 /product="transcriptional regulator, MerR family" /protein_id="YP_002983662.1" /db_xref="GI:241665303" /db_xref="InterPro:IPR000551" /db_xref="InterPro:IPR011791" /db_xref="InterPro:IPR015358" /db_xref="GeneID:8021418" /translation="MKIGELAQRTGISIETIRFYEAQGLLPPPARAANNYRVYSAEHA EQLAFIAKCRSLDMAHTEIHRLLELQANPQASCEEINNLLDEHLRHVETRIAELTELR RQIEAIGRRCTTAASVAECGVLQSLHEEAVAASPHGHGHGHDHGDAEHSHRHIRGVHR" gene complement(289632..291983) /locus_tag="Rpic12D_3732" /db_xref="GeneID:8021419" CDS complement(289632..291983) /locus_tag="Rpic12D_3732" /inference="protein motif:TFAM:TIGR01525" /note="TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: rso:RS05448 metal-transporting P-type ATPase transmembrane protein" /codon_start=1 /transl_table=11 /product="heavy metal translocating P-type ATPase" /protein_id="YP_002983663.1" /db_xref="GI:241665304" /db_xref="InterPro:IPR000150" /db_xref="InterPro:IPR001757" /db_xref="InterPro:IPR005834" /db_xref="InterPro:IPR006121" /db_xref="InterPro:IPR006404" /db_xref="InterPro:IPR006416" /db_xref="InterPro:IPR008250" /db_xref="GeneID:8021419" /translation="MKPDHAPSLPSRDHAAKPETSGCGGCCVHYQLVATDTSRHAHDH DHNHAHEADAPVDAAARARASGRTTVRIEQMDCPTEERMIRTKLGSAEGVVALEFNLL ERHLTIHHTVDDVTPFLEALRAIGMGGEVLEAHDRAAAAPAEPAGISRRTWLLGAGGV AAFGAEVIAWSLGDHAWPVLALALASIALAGGPTLRKGWIALRALTFNINFLMAVAVI GALLIGKWAEAAMVIFLFAVAEAIEARALVRARDAVRALTAIAPDTAELADGNGGWRD VAVEAVGIGARLRVRTGSRVPVDARIVSGRAALDESPVTGESLPVEKTIGDIVLAGTI VTDGVIEAQATAVAADSTLARIAGAIQQAQAQRAPTQRFVDRFSSIYTPAMMVLALAV AVIGPLVTTEGWLAWTYRALVLLVIACPCALVISTPVTVVSGLAAAARRGIVVKGGVY LESGRRLRALALDKTGTLTTGRPVLDAVMLPDGSRRAVAELHATTDAAHLRALAVAAA LDANTTHPIAVAIVQAAAAHGAVAAGAIQDLSVLPGHGVAGTLGGVRWHLGNAALVAD RGFDTSAWRAAADRLQAEGMSAVTLCDAGGAVALFGVRDRERPESAQAIADLRALGVL PVMITGDDRRAAQAIARTVGIDQVRAEQLPEDKQRVVGELAAQHGSVGMVGDGINDAP ALARADIGFAMGAAGTATALEAADVAIMDDDPRKLASFIRISRRTVAVLRQNIALALG IKAVFLALAVMGEATLWMAIFADVGASLLVVFNGLRVMRTRAA" gene complement(292035..292583) /locus_tag="Rpic12D_3733" /db_xref="GeneID:8021420" CDS complement(292035..292583) /locus_tag="Rpic12D_3733" /inference="protein motif:PFAM:PF06821" /note="PFAM: protein of unknown function DUF1234; KEGG: aav:Aave_0055 protein of unknown function DUF1234" /codon_start=1 /transl_table=11 /product="protein of unknown function DUF1234" /protein_id="YP_002983664.1" /db_xref="GI:241665305" /db_xref="InterPro:IPR010662" /db_xref="GeneID:8021420" /translation="MSAPATVLILPGWQNSGPEHWQSRWERRHGDRRVQQREWFTPKR ADWVAALDAAVAAAPGDVVLVAHSLGCMLTAHWAAVSAHTGRVRGALLVAPPQLDRAD APPELADFRPVPQRRLPFPATLIFSGNDPFSDAAWSRHQADVWGAQPIDLGARGHINA ESGLGDWPEARAIVAKWTKSPT" gene 292773..294071 /locus_tag="Rpic12D_3734" /db_xref="GeneID:8021421" CDS 292773..294071 /locus_tag="Rpic12D_3734" /inference="protein motif:TFAM:TIGR00784" /note="TIGRFAM: citrate/H+ symporter, CitMHS family; PFAM: Citrate transporter; C4-dicarboxylate anaerobic carrier; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: bpy:Bphyt_4090 citrate/H+ symporter, CitMHS family" /codon_start=1 /transl_table=11 /product="citrate/H+ symporter, CitMHS family" /protein_id="YP_002983665.1" /db_xref="GI:241665306" /db_xref="InterPro:IPR004669" /db_xref="InterPro:IPR004680" /db_xref="InterPro:IPR010656" /db_xref="InterPro:IPR014738" /db_xref="GeneID:8021421" /translation="MLALLGLLTIVALFVVILTKRMSPLVALIAIPVIAALVGGFGLN TSKFIIGGIKDVAPVAGMFIFAILYFGIVTDAGMLDPIIDRILRTVGSRPPRIVVGSA LLALLIHLDGSGAVAFLITIPAMLPLYDRLGMDRRILACVTSMACGVNFLPWTGPMIR ASASLHMPVTDIFNPLIPVQIAGLVFVFACAWLLGKREEKRLGLTNHAGGAQVVARPL SDAEQALRRPRNFWINIILTVVVMGVMVSGKVDPVVMFMLGVVAALLINYPNVDQQRQ RVDAHAKAALMMASILLAAGVFTGIMSKSGMLTAMAKTAVDFIPSGMAHHIPVVLGVL SMPLSLLFDPDSFYFGVLPVVAEASKMLGVAPVHVAQAAVLGQMTTGFPVSPLTPATF LVVGLCGIELADHQKFSIPFLFGASLLMTAVAVVLGVLPW" gene 294076..295431 /locus_tag="Rpic12D_3735" /db_xref="GeneID:8021422" CDS 294076..295431 /locus_tag="Rpic12D_3735" /inference="protein motif:PFAM:PF07287" /note="PFAM: protein of unknown function DUF1446; KEGG: mrd:Mrad2831_4048 hypothetical protein" /codon_start=1 /transl_table=11 /product="protein of unknown function DUF1446" /protein_id="YP_002983666.1" /db_xref="GI:241665307" /db_xref="InterPro:IPR010839" /db_xref="GeneID:8021422" /translation="MKTVLKTLRIGGGAGYSGDRIEPALELAEHGDIDVLMFECLAER TIALAQQVRRKDPSHGYDPLLEARMRAVLPACAARGIRIVTNMGAANPQAAAERTRDI ARELGLKLRVAAVTGDDVFDLLQARGQDFTLMDGGAPVASLHARMVSANAYLGAQGIV DALAQGADVVITGRVADPALALGPLVHAFGWRMDDWHRLGCGTLAGHLLECAGQITGG YFADPGIKDVPDLARLGFPIGEVGEDGSVLITKVATAGGLVTEATCKEQLLYEIHDPA RYLTPDVVADFSNVRMHSGGKDRVVIEGATGTPRTGQLKVSIGYLDSYIGEGQISYAG PNAVARGKLALDIVRERLALTGVQTTEARFELIGVDALHGAALSRTDAEPYEVRVRVA ARTESMAEAVRIGNEVETLLTCGPSGGGGATKSAREIIAVASTLIPAELAPHAVHILE S" gene 295433..295753 /locus_tag="Rpic12D_3736" /db_xref="GeneID:8021423" CDS 295433..295753 /locus_tag="Rpic12D_3736" /inference="similar to AA sequence:KEGG:M446_5609" /note="KEGG: met:M446_5609 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983667.1" /db_xref="GI:241665308" /db_xref="GeneID:8021423" /translation="MPRTLRDLAHTRAGDKGDISCISVIALRPECAEDFAVLEQHVTV ERVRAHFADLVRGDVERYVLPQLGALNFVLHGALAGGVTRSLALDAHGKSLSSALLTL EIPG" gene 295780..296679 /locus_tag="Rpic12D_3737" /db_xref="GeneID:8021424" CDS 295780..296679 /locus_tag="Rpic12D_3737" /inference="protein motif:PFAM:PF03466" /note="PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rme:Rmet_5879 transcriptional regulator, LysR family" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LysR family" /protein_id="YP_002983668.1" /db_xref="GI:241665309" /db_xref="InterPro:IPR000847" /db_xref="InterPro:IPR005119" /db_xref="GeneID:8021424" /translation="MNLSVKQLRAFAALREHKNFTQAAQTCHLSQSAFSALIQNLEAD AGVRLFDRNTRHVELTPEGEAFAESALRLLADFEATFSELRDRAAARTGRVTVTALPS IAAGILPGVLAAFSAQHPGIQLALHDQLSDPCIDMVRRGSADFAIAAMGADMAGLTAQ PFCTDDFHLVCHQDHPLARKPALAVGDLVDTPFIHLARNTSIRQYLDAALHPTKLRSG MEVEHLATAAALVAANLGITVIPALALFQFRLPALAVRPLPLPGLVRTLYVIRRDGRS LSVAAQGLLDLLLAHPAHTTASV" gene 296770..297237 /locus_tag="Rpic12D_3738" /db_xref="GeneID:8021425" CDS 296770..297237 /locus_tag="Rpic12D_3738" /inference="protein motif:PFAM:PF00582" /note="PFAM: UspA domain protein; KEGG: rso:RS05449 hypothetical protein" /codon_start=1 /transl_table=11 /product="UspA domain protein" /protein_id="YP_002983669.1" /db_xref="GI:241665310" /db_xref="InterPro:IPR006015" /db_xref="InterPro:IPR006016" /db_xref="GeneID:8021425" /translation="MHQRILAAFDGTHESHLAVEEAAALARAFNGRVRVVWAIGSPAM PESREIYSVDKLRDEAHRTASASLVELQRLFDADGTAAETGVLMLDSTDDDIGLALEH EAERWQADTIVVGSHGKHGLARLLLGSVAERTARLSHRTVIVVRAPHPQNAAG" gene 297353..297796 /locus_tag="Rpic12D_3739" /db_xref="GeneID:8021426" CDS 297353..297796 /locus_tag="Rpic12D_3739" /inference="protein motif:PFAM:PF07366" /note="PFAM: protein of unknown function DUF1486; KEGG: rso:RS05451 hypothetical protein" /codon_start=1 /transl_table=11 /product="protein of unknown function DUF1486" /protein_id="YP_002983670.1" /db_xref="GI:241665311" /db_xref="InterPro:IPR009959" /db_xref="GeneID:8021426" /translation="MPQPIPQTLNAPAQATLEAWHAMLDSGNMDDLDRLFADEVVFRS PVAHTPYPGRTATTLVLRTVNTVFEDFKYHRSFATDDGASVVLEFSANVSGKALKGID MIRFNAAGKIVEFEVMVRPATGLQALGAAMGAKLGDKLGLLKAGA" gene 297851..298855 /locus_tag="Rpic12D_3740" /db_xref="GeneID:8021427" CDS 297851..298855 /locus_tag="Rpic12D_3740" /inference="protein motif:PFAM:PF03060" /note="PFAM: 2-nitropropane dioxygenase NPD; KEGG: rso:RS05452 putative transmembrane protein" /codon_start=1 /transl_table=11 /product="2-nitropropane dioxygenase NPD" /protein_id="YP_002983671.1" /db_xref="GI:241665312" /db_xref="InterPro:IPR004136" /db_xref="GeneID:8021427" /translation="MSLPPILKNRLSVPVVGSPLFIISNPDLVIAQCKAGVVGSFPAL NARPAELLETWLQRITTELAEYDAQHPDKPSAPFAVNQIVHKSNDRLEHDLELCVKYK VPIVITSLGAREDVNQAVHSYGGIVLHDVINNKFAKKAIEKGADGLIAVAAGAGGHAG TTSPFALIHEIREWFDGPLLLSGAIANGNAILAALAAGADLAYVGSAFIATEEANAIE GYKQAIVESTASDIVYTNLFTGVHGNYLRKSIEGAGLDPDALPESDPSKMNFGSGGGA KAKAWKDIWGAGQGVGAVKRVVPAAELVKRFAEEFEVARRRLGNIEALRAPAGDKATA" gene complement(298860..299399) /locus_tag="Rpic12D_3741" /db_xref="GeneID:8021428" CDS complement(298860..299399) /locus_tag="Rpic12D_3741" /inference="protein motif:PFAM:PF03551" /note="PFAM: transcriptional regulator PadR family protein; KEGG: rso:RS05461 hypothetical protein" /codon_start=1 /transl_table=11 /product="transcriptional regulator, PadR-like family" /protein_id="YP_002983672.1" /db_xref="GI:241665313" /db_xref="InterPro:IPR005149" /db_xref="GeneID:8021428" /translation="MSIQHALLTSLLEKPSSGYELARRFDKSMGYFWSATHQQIYREL GRMAEAGWVSAEEEEDSRKKTYTVLPPGRDELARWVLEPTVSSDNREEVLVKLRAEAV IGPLGFADEMQRLITQHRTRLNTFREIEQRDFSGADLTRAQRLRHAVLQRGIVYEEGW LAWAGEVLPLLEPASVTTA" gene complement(299823..300245) /locus_tag="Rpic12D_3742" /db_xref="GeneID:8021429" CDS complement(299823..300245) /locus_tag="Rpic12D_3742" /inference="similar to AA sequence:KEGG:azo2559" /note="KEGG: azo:azo2559 conserved hypothetical secreted protein" /codon_start=1 /transl_table=11 /product="conserved hypothetical secreted protein" /protein_id="YP_002983673.1" /db_xref="GI:241665314" /db_xref="GeneID:8021429" /translation="MLKKTVVLVLLSVGAATAIAAPAFTGPDLSGVYTCKGMDAHEGA YTGTVTLELVREQSTASYGAYRFKLEVPGYGAYPGEAASNGTQMAIHFALTDQATKDY GTGIASFRKKQGKWSFKKFYFEPEFKGGNYGTEACVQR" sig_peptide complement(299823..299885) /locus_tag="Rpic12D_3742" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.680 at residue 21" gene complement(300444..301706) /locus_tag="Rpic12D_3743" /db_xref="GeneID:8021430" CDS complement(300444..301706) /locus_tag="Rpic12D_3743" /inference="protein motif:PFAM:PF00144" /note="PFAM: beta-lactamase; KEGG: rme:Rmet_5786 beta-lactamase" /codon_start=1 /transl_table=11 /product="beta-lactamase" /protein_id="YP_002983674.1" /db_xref="GI:241665315" /db_xref="InterPro:IPR001466" /db_xref="GeneID:8021430" /translation="MDMKRGQAQGMSRDRLDRVGRFIDDAYIAPGKLPGALVQVWRRG ERVLNAVLGQADRERQVPLTEDAIFRIYSMTKPITSVAFMMLVEECKVALDDPVSKFI PAWQNLGVYAGGFMESFQTSPAARPMRMVDLLRHTSGLTYGFHQNTNIDAAYRRLKLG DIATAGTLDDMIDKLAGLPLEFSPGEAWNYSVSTDVLGYLVGKISGMPFETFLKERIF DPLGMVDTAFYVPEDKASRLCACYAVGSLGSKVVAERPALQDDPRTSVYLKPPSFVSG GGGLVSTAADYLRFARMLLQGGELDGVRLLGPKTLELMTANHLPGGADISSMSRHSMF SEAAYDGVGFGLGFATTVAQPATLIPGSTGDFFWGGAAGTFFWVDPREDLIGLFLTQV LPSSAYPVRRQLRTLVYSAITESEGGAR" gene 302045..302962 /locus_tag="Rpic12D_3744" /db_xref="GeneID:8021431" CDS 302045..302962 /locus_tag="Rpic12D_3744" /inference="protein motif:PFAM:PF03466" /note="PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rso:RS05463 transcription regulator protein" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LysR family" /protein_id="YP_002983675.1" /db_xref="GI:241665316" /db_xref="InterPro:IPR000847" /db_xref="InterPro:IPR005119" /db_xref="GeneID:8021431" /translation="MKRFDDLYLFTRVVEAGGFSAAERATGIPKSRLSRRVAELETQL GTRLLHRSSHRVSVTPVGEAVYRHAREMADASAAIEALAGAARSEPAGVLRVGTSPLL AETLLARWLAEFADSHPKLRIELDLSNTYVDLIEQRIDVAIRAATGPLPSREVVARHL AVSPRVLVASPALVARVGEPATPADLENTPCLGQGALTRCRDWVLLDARGHRMVLPIR PRFAADNLLALREAAIAGLGLAILPQHCCHAALGEGRLRTVLPGWTPEPADLHALYPS RTGVPPSVKALVAFLRERFAAEATMRPIA" gene complement(303196..304266) /locus_tag="Rpic12D_3745" /db_xref="GeneID:8021432" CDS complement(303196..304266) /locus_tag="Rpic12D_3745" /inference="protein motif:PFAM:PF03060" /note="PFAM: 2-nitropropane dioxygenase NPD; KEGG: rso:RS05464 oxidoreductase protein" /codon_start=1 /transl_table=11 /product="2-nitropropane dioxygenase NPD" /protein_id="YP_002983676.1" /db_xref="GI:241665317" /db_xref="InterPro:IPR004136" /db_xref="GeneID:8021432" /translation="MSAWPDARVLKLFNIEVPIVLGPMAGAAGVELAIAVARAGGLGS LPCAMLNAEQIRQQVEQFRAAVRAPVNLNFFCHTPPQPDAEREAKWRAHLAPYYAEFG IDPATQAPTANRAPFDETTCALVEELKPEVVSFHFGLPTPELQARVKATGAKILSAAT TVEEARWLEARGVDAIIAMGNEAGGHRGMFLAKTIESQVGTFALVPQVADAVKVPIIA AGGIGDARGVVAAFALGASAAQIGTAYLLSPEAKTSSIHRAALKRATDADTALTNLFS GRPARGIVNRLMREIGPMSPLAPAFPTAGGALAPLRAKTEPAGSGDFINLWSGQAGRF ATEDSAEAITRRIATQALERLT" gene 304416..304994 /locus_tag="Rpic12D_3746" /db_xref="GeneID:8021433" CDS 304416..304994 /locus_tag="Rpic12D_3746" /inference="protein motif:PFAM:PF07336" /note="PFAM: protein of unknown function DUF1470; KEGG: rso:RS05465 hypothetical protein" /codon_start=1 /transl_table=11 /product="protein of unknown function DUF1470" /protein_id="YP_002983677.1" /db_xref="GI:241665318" /db_xref="InterPro:IPR010852" /db_xref="GeneID:8021433" /translation="MPATASREIPPLIADHPVLDMLNTVANANGQPHDCWQTDADVSD WLIRAGWLAEPLAGRYPPGVLLAVARHLREVTRMLVEARKAGRAANADAINVLLRQAP SHPVLVWNDKTPRVELLRPADSVEQCLAPLAEAAAHLLAEGDFGLVRMCEYPECTRWF YDRTKSHKRRWCSMGVCGNRHKVAEYRRRQQG" gene 305103..305867 /locus_tag="Rpic12D_3747" /db_xref="GeneID:8021434" CDS 305103..305867 /locus_tag="Rpic12D_3747" /inference="protein motif:PFAM:PF00106" /note="PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: rso:RS05466 dehydrogenase oxidoreductase protein" /codon_start=1 /transl_table=11 /product="short-chain dehydrogenase/reductase SDR" /protein_id="YP_002983678.1" /db_xref="GI:241665319" /db_xref="InterPro:IPR001509" /db_xref="InterPro:IPR002198" /db_xref="InterPro:IPR002347" /db_xref="InterPro:IPR002424" /db_xref="InterPro:IPR013968" /db_xref="GeneID:8021434" /translation="MSPTPSAIALRLSGRTAIVTGGSRGIGAAVARRLAADGARVAVV YRSKQEEADAVVQSIRATGAHAIAVQADVSDAASVDAMTGTVREAFGAIDILVNNAGI LENQPVGSIDLASFDVQFRTNAFSTILVTQAVLPHVPAPGGRIVNVSSSLVYRPRAGL AVYAASKAAVGALTHAFAVELGPRNITVNAVAPALTRTDMTAPIPDEVKARMRDSTPL GRLAEPGDIADAVAFLASDDARWITGRTLMTDGGFI" gene complement(306092..307351) /locus_tag="Rpic12D_3748" /db_xref="GeneID:8021435" CDS complement(306092..307351) /locus_tag="Rpic12D_3748" /inference="protein motif:PFAM:PF07690" /note="PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_0628 major facilitator superfamily MFS_1" /codon_start=1 /transl_table=11 /product="major facilitator superfamily MFS_1" /protein_id="YP_002983679.1" /db_xref="GI:241665320" /db_xref="InterPro:IPR007114" /db_xref="InterPro:IPR011701" /db_xref="GeneID:8021435" /translation="MTTAVLSSSAAGQFSRHHRWKVLGVGVAANASFSAAFSGIPTTA VFIRSAYHLGNAELGIALGLLGLGIAISELPWGLLTDRWGDRTVLLAGLGLTALALLL MAGFAAPAHGNVPPLTWLAAGMLSVGLLGGSVNGSSGRAVMGWFREGERGLAMSIRQT AVPLGGGIGALVLPSLAAHAGFAAVYGVLAAACALTAVLTWLWVHEAAPAADAGVARV VSEGPGPLRDVMLWRMALAIGLLCVPQGAVVAFATVFLRDFAHADVLTLSLTMAAVQG GAAVMRVWSGRWTDRHGNRRAYLLACARLSAALFVVLAGVAWLTGTLHADLAVMRGVL VAAIVAGGICVSAWHGVGYTEMATLAGAQRAGTALGLGNTGAFAALGLTSLFLPHVLA WSSWPVVWLLAAGCALIAWRVLPAADR" gene 307441..308403 /locus_tag="Rpic12D_3749" /db_xref="GeneID:8021436" CDS 307441..308403 /locus_tag="Rpic12D_3749" /inference="protein motif:PFAM:PF01965" /note="PFAM: ThiJ/PfpI domain protein; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_A4475 transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, AraC family" /protein_id="YP_002983680.1" /db_xref="GI:241665321" /db_xref="InterPro:IPR000005" /db_xref="InterPro:IPR002818" /db_xref="GeneID:8021436" /translation="MRRIGFLVFPGCSLLDFTGPLTAFDVANRLAAHPAYRIEVLSEA GAQVQSAPGLVMQTQALDDPAFDTLVISGGNGPRDDAFSPGLIAFVREAAQHSRRMTS VCSGAFALAAAGLLDGRRATTHWRMAAQLQRRYPRVHVQADRIFIQDGPVWTSAGISS GIDLALALIEADLGIDVSRAVARELVVYHRRPGGQSQFSALLELDPASTRIARALSYA RDHLHEALDVDRLAEVAHLSRRQFDRAFVAETGQTPAKAIEKLRAEAARPRVEAGNES LEHIARAVGFADPERMRRAFIRVFGHPPQSVRRSGRLVRAQLAA" sig_peptide 307441..307512 /locus_tag="Rpic12D_3749" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.729) with cleavage site probability 0.695 at residue 24" gene 308497..309162 /locus_tag="Rpic12D_3750" /db_xref="GeneID:8021437" CDS 308497..309162 /locus_tag="Rpic12D_3750" /inference="protein motif:PFAM:PF02798" /note="PFAM: Glutathione S-transferase domain; KEGG: rso:RS04766 hypothetical protein" /codon_start=1 /transl_table=11 /product="Glutathione S-transferase domain protein" /protein_id="YP_002983681.1" /db_xref="GI:241665322" /db_xref="InterPro:IPR004045" /db_xref="GeneID:8021437" /translation="MSIDTALPLLYSYRRCPYAMRARLAMLQARRPFQTFEIVMRDKP AELLALSPKGTVPVLRLTDGSVLEESWDIMRWALESPDADGWWSRAQSEDNLLLLNTN DGAFKRHLDRYKYPDRYPHEETTRETARANAVATLLTPLEARLQRQRYLGGRAPCATD LAIFPFVRQFAAVEPDWFDDQPLPALHAWLAQWLGSDLFAVCMTKRPVQIAAVFPTFQ PIH" gene 309183..310043 /locus_tag="Rpic12D_3751" /db_xref="GeneID:8021438" CDS 309183..310043 /locus_tag="Rpic12D_3751" /inference="protein motif:TFAM:TIGR00027" /note="TIGRFAM: methyltransferase; KEGG: bcm:Bcenmc03_5616 methyltransferase" /codon_start=1 /transl_table=11 /product="methyltransferase" /protein_id="YP_002983682.1" /db_xref="GI:241665323" /db_xref="InterPro:IPR005829" /db_xref="InterPro:IPR011610" /db_xref="GeneID:8021438" /translation="MSDAQLLVPDSTAARVALWRALHLEIDALPHVLEDRIGLTLLAP DPGWQQRGDMDPQFTRPFRASIVARARFIEDLVIEQAGLGLRQYVILGAGLDSFAQRR PDVASRMTVFEVDQPTPQAWKRQRLTALGFGLPDWLRFVPVDFEARESWRDALVAAGF DTSQPAIVVSTGVSMYLTKEANAATLRQVAGLAPGSMLAMTFLLPLEMAAAEVRPGLE MAEKGARASGTPFLSFFTPPEMLALARENGFGDARHISATELTQRYFSDRADGLRPPS NAEELLVATV" gene complement(310057..310389) /locus_tag="Rpic12D_3752" /db_xref="GeneID:8021439" CDS complement(310057..310389) /locus_tag="Rpic12D_3752" /inference="similar to AA sequence:KEGG:Reut_A1768" /note="KEGG: reu:Reut_A1768 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983683.1" /db_xref="GI:241665324" /db_xref="GeneID:8021439" /translation="MQELAFRTLVYRYFFFGWLFKDASRGNLFERSAAWRFNQAHAHW LLAYMRRWLWCGVVCYVLGGIVELALKTPCLSVLFYVPSALSVPINVVTGVLWIGLKA LPGPVRER" gene complement(310545..310934) /locus_tag="Rpic12D_3753" /db_xref="GeneID:8021440" CDS complement(310545..310934) /locus_tag="Rpic12D_3753" /inference="similar to AA sequence:KEGG:Bphy_7087" /note="KEGG: bph:Bphy_7087 putative transmembrane protein" /codon_start=1 /transl_table=11 /product="putative transmembrane protein" /protein_id="YP_002983684.1" /db_xref="GI:241665325" /db_xref="GeneID:8021440" /translation="MTIGLADAVLVLHALLVAFIVGGLLFVWAGAALKCACVRNRGFR LLHLAAISVVAGLAIANVPCPLTALEDWLRTGAAGSSGFVQRWVSVWLFYDLPPWVFA ASYAVFLLIVAQTWRCIPPRARRGVLF" gene complement(311024..311389) /locus_tag="Rpic12D_3754" /db_xref="GeneID:8021441" CDS complement(311024..311389) /locus_tag="Rpic12D_3754" /inference="protein motif:PFAM:PF00072" /note="PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: bxe:Bxe_B3007 response regulator receiver protein" /codon_start=1 /transl_table=11 /product="response regulator receiver protein" /protein_id="YP_002983685.1" /db_xref="GI:241665326" /db_xref="InterPro:IPR001789" /db_xref="GeneID:8021441" /translation="MSKILVVDDSSTVRDEVAGFLKKNGLAVDTAVDGKDGLAKIKAN PGLRLVISDVNMPNMDGLTMVEKVRGELGNKTVNVIMLTTESSPAMKDRGKAAGVKGW IVKPFKGDAVLETFRKLAG" gene complement(311410..311943) /locus_tag="Rpic12D_3755" /db_xref="GeneID:8021442" CDS complement(311410..311943) /locus_tag="Rpic12D_3755" /inference="similar to AA sequence:KEGG:Bxe_B3009" /note="KEGG: bxe:Bxe_B3009 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983686.1" /db_xref="GI:241665327" /db_xref="GeneID:8021442" /translation="MISSHAQDSFDRIFRKAASMRLALHADDTLHIAAADPGDAIHGE EALILTISSVAFRLLLVLRFDDDASTRAYYTGEATGRSFEEARLEIGNLCCGAVNQEL LQVFPDLGMSTPYAVSARCLAYLDALKPGYVASYSITINDAVRVAATVCVCAHARLDF VANVSDEVASGGELELF" gene complement(311940..312674) /locus_tag="Rpic12D_3756" /db_xref="GeneID:8021443" CDS complement(311940..312674) /locus_tag="Rpic12D_3756" /inference="protein motif:PFAM:PF00015" /note="PFAM: chemotaxis sensory transducer; KEGG: bpy:Bphyt_6985 methyl-accepting chemotaxis sensory transducer" /codon_start=1 /transl_table=11 /product="methyl-accepting chemotaxis sensory transducer" /protein_id="YP_002983687.1" /db_xref="GI:241665328" /db_xref="InterPro:IPR004089" /db_xref="GeneID:8021443" /translation="MESTVLATLAAGLVCGVLAWSVQQRRMNTMARTVQDAHRRAAEL TAEVAREAARAEADARAMAALQTTLAQMREATSDHLEVIEQLRTELQSAGAAKAQWAA CANRIAEEAARLRGLALTFERWHEQMISLMEQNHDMHAKNEELQSIVRHVVIVSLNAS IEAARAGQAGRGFAVVASEVRSLAARSEDLSKSYRNSLHLNDLTTTATFQDIQAGGKM IAASLASVEALASRFQAQLHEQAGTT" sig_peptide complement(311940..311999) /locus_tag="Rpic12D_3756" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.983) with cleavage site probability 0.668 at residue 20" gene complement(312674..315058) /locus_tag="Rpic12D_3757" /db_xref="GeneID:8021444" CDS complement(312674..315058) /locus_tag="Rpic12D_3757" /inference="protein motif:PFAM:PF00672" /note="PFAM: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; PAC repeat-containing protein; KEGG: bpy:Bphyt_6986 putative CheA signal transduction histidine kinase" /codon_start=1 /transl_table=11 /product="CheA signal transduction histidine kinase" /protein_id="YP_002983688.1" /db_xref="GI:241665329" /db_xref="InterPro:IPR000700" /db_xref="InterPro:IPR001610" /db_xref="InterPro:IPR003594" /db_xref="InterPro:IPR003660" /db_xref="InterPro:IPR004358" /db_xref="InterPro:IPR008207" /db_xref="GeneID:8021444" /translation="MTIRHRITLLVVLMFVALAAIGGYAVHQTRGSAMEVRQVTEGVV PSALASADLVSLVKDVQLATMVLVYAPDDNIVTQAKQDLKAKEAALRAALDVQAKGAN GHAQEGLVTQAKESVDSYVEAIEQTTDMKLAGKNELAQAFLFANVASYRDVLEKIVET LRIEKNREKDGAITALNGKLATTTTAIGVVSGVAIVVLTAIGMLLYRQITRPLTRMQA EMSEIATSQDFTRRVPVGRMDEIGRSVVAFNQMIEKIQENSALLKQKTADIQAMLQNM QQGILTVVDGSRVHEEYSIYLESIFETQDIAGRGLMELVFADTALGADALSQVEAAVD ACLGQDVINFAFNQHLLVSEVEKRMPDGRVKTLDLSWSAITDESDTILRLMLCVRDVT ELRKLAAEASEQRRNLEIIGEILAVSQEKFQHFIDSSTTFVHENERIIRQYSEADNAA IAALFRNMHTIKGNARTYNLQYLTNVVHETEQTYHALREPGSEHTWDQDWLMQELTRV REAIESYARINEVKLGRKSTPMAGAGEQPTSDALVRIQQCLRLLESANPASVHELVSM RDAVYQRLRLLGSERVEDMLSGVLQSLPSLAQELGKAPVTLCIGDNGYRIRTEVRDVL QNVFTHLLRNAIDHGIETADVRIAHGKPAAGVIDMEVGVDQGMLQITLCDDGRGLALD RIRSIAVERGWIGAAERPGDEEIAQYIFRPGFSTADKVTEVSGRGVGMDAVVEFLKRE QGRIALRFTDDRKGAAFRQFQTVVCLPERFAVDSVRTTLGSEPLVSMDLDEEAL" sig_peptide complement(312674..312733) /locus_tag="Rpic12D_3757" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.683 at residue 20" gene 315527..315922 /locus_tag="Rpic12D_3758" /db_xref="GeneID:8021445" CDS 315527..315922 /locus_tag="Rpic12D_3758" /inference="protein motif:PFAM:PF08818" /note="PFAM: Domain of unknown function DUF1801; KEGG: rme:Rmet_1765 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983689.1" /db_xref="GI:241665330" /db_xref="InterPro:IPR014922" /db_xref="GeneID:8021445" /translation="MKKRTPDDGVLASERIDARIAELGDWRGAMLARLRAVIKAADPE VVEEWKWSVPVWSHDGLICTGEAYQRTVKMTFAKGASVPDPAGLFNASLEGNTRRAID FREGDTVNEPALTALIQAAVAVNQQKATR" gene 316009..316341 /locus_tag="Rpic12D_3759" /db_xref="GeneID:8021446" CDS 316009..316341 /locus_tag="Rpic12D_3759" /inference="similar to AA sequence:KEGG:BTH_II1151" /note="KEGG: bte:BTH_II1151 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983690.1" /db_xref="GI:241665331" /db_xref="GeneID:8021446" /translation="MIQPTPVFKDNLARLPAIDGIERIDLVDSQGAVVADIENKPGKQ GSLAVYHYLQQAFGQLDAAAAQHGLAVFAEHTADARHRPGAHPNVDRLLAIAAGADAL RINVIAKG" gene complement(316387..316935) /locus_tag="Rpic12D_3760" /db_xref="GeneID:8021447" CDS complement(316387..316935) /locus_tag="Rpic12D_3760" /inference="protein motif:PFAM:PF00583" /note="PFAM: GCN5-related N-acetyltransferase; KEGG: rso:RSc3133 putative antibiotic resistance (acetyltransferase) protein" /codon_start=1 /transl_table=11 /product="GCN5-related N-acetyltransferase" /protein_id="YP_002983691.1" /db_xref="GI:241665332" /db_xref="InterPro:IPR000182" /db_xref="GeneID:8021447" /translation="MPSPRPNDDIRLIDCNEAEHASAILDILNEAIVNSTALYDYVPR PPQAMQVWFAAKRAGGFPVVGAVDASGRLLGFASWGTFRAFPAYKYTVEHSVYVHHSS RGRGLGERLLQELIRRAQAAQVHVLVGCIDAANAGSVALHTRLGFVHAGTIKEAGFKF GRWLDAAFYQLNLATPEHPVDG" gene 317121..322037 /locus_tag="Rpic12D_3761" /db_xref="GeneID:8021448" CDS 317121..322037 /locus_tag="Rpic12D_3761" /inference="protein motif:PFAM:PF05088" /note="PFAM: NAD-glutamate dehydrogenase; KEGG: pol:Bpro_3020 glutamate dehydrogenase (NAD)" /codon_start=1 /transl_table=11 /product="NAD-glutamate dehydrogenase" /protein_id="YP_002983692.1" /db_xref="GI:241665333" /db_xref="InterPro:IPR007780" /db_xref="GeneID:8021448" /translation="MSAQQEDKVRQHMADAVALAHERAPDIAALFEPYLQHYYGLADP EDVISRSVADLYGAAMAHWQLGQKFVSGQPRVRIYNPSLEQHGWYCGHTVVEIVNDDM PFLFDSVTMEINRQGLALHSGFHPVYRMQRDASGMRVAVAAGGGVLRPAALAGDMPDT PADADHVNGGAARFESYIHIEVDRFSEPARMQALHDGLVRVLRDVRAAVEDWKPMQAA AQAAIDTLAARAAQASTSEVERAEIAETQAFLAWMLERHFTFLGYRDYALVIQNDGHY LRGMPGTGLGVLRETLRDPATPDTTRLAPGAARFIDAPEPIFLTKANTRATVHRPGYL DYVGIKLFDAEGRVCGQRRFLGLYTSNVYMVPAEEIPLVRRKVASVIRRTGFLPNGHL AKTLVTILEQYPRDELFQIDSEALYDIALGILRLQERQRTRLFVRRDPFDRFVSCLVF VPREKFNTDLRVRIQKLLQDAYHGTAVEFTPLLSESMLARIHITVRTQPGNVPDVDVA ELEDRVVQAARRWQDDLADALLERGGEERRNRLLRRYTDAFPAGFREDYPARLAVRDI ELMEPLLADPASGNQLAMQLYRPLEAPAGAVRFKIYRAGQPTSLSQSLPMLEHLGVRV NEERPYCIEPADAPPIWMHDFGMETMDGSEVDLDEARTRFEDAFARIWSGELENDDLN RLVLLAGLTWREVRILRAYARYIRQIGSAFSNAYMESALNGNPSISRALVHLFLVRFD PALEAAERTRRGDTLRRQIDEALEEVPNLDEDRILRQFLGVLEATLRTNYFQDTAPDG QPKPYLSFKFDPARVPGLPEPKPMFEIWVYSPRVEGVHLRGGKVARGGLRWSDRREDF RTEVLGLVKAQMVKNTVIVPVGSKGGFVVKQPPPASDRDAYLAEGVACYQTFLRGLLD LTDNYADGRLMPPRDVVRYDEDDPYLVVAADKGTATFSDYANAISAEYGFWLGDAFAS GGSVGYDHKKMAITARGAWESVKRHFSELGVDTQTQDFTVVGVGDMSGDVFGNGMLLS RHIRLLAAFDHRHIFLDPSPDATASFAERARLFSLPRSSWADYDRALISPGGGVFPRT AKAIALSPQVRAMLDVSATEMAPNDLLHAILKAPVDLLYNGGIGTYIKASTETHAQVG DRANDGLRVNGAALRCKVVAEGGNLGCTQLGRIEYAQHGGRINTDAIDNSAGVDCSDH EVNIKILLGLVVADGEMTLKQRNTLLAEMTDEVGELVLRDNYFQTQALSLARARTALW LDSEARLMRHLERNGRLNRAIEFLPADEEIDTRRAAGGGLTTPERAVLMAYSKMWLVD VLLGSDLPDQPFIAQGLPSYFPQPLHVRCHAAIPRHPLRREILATMHANALVNRAGIT FVHRLAEETGAEPLAVVWASLVARAVYRLDTLWHEVDGLDAKVSHDTQAALFAALAQL HERATLWFLRRRLSDVPATVEHFRAAVDALGPDVDTLQTEASMQATEPQRQALIEAGV PEGLARMATGVTARVSLLDIAEVAAASACDTRLAARVYFVLDQPLGYGWLQAGILGLP AQTHWQMLARATLLEELGQLRRRLTGSVLRDAPAGASAEALVQTWQTARQDALVRYNR VMADQMTGGPADLAMLSVGLRALAEVEA" gene complement(322113..322364) /locus_tag="Rpic12D_3762" /db_xref="GeneID:8021449" CDS complement(322113..322364) /locus_tag="Rpic12D_3762" /inference="ab initio prediction:Prodigal:1.4" /note="KEGG: reu:Reut_B5133 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983693.1" /db_xref="GI:241665334" /db_xref="GeneID:8021449" /translation="MNTLEPTVLSPHEFAVLLLVNDGAESDDLDRADVEALIERQLVT LERRSPDQCYARVTLQGYVFLKASGHVRASGRRVAAVPH" gene complement(322759..323739) /locus_tag="Rpic12D_3763" /db_xref="GeneID:8021450" CDS complement(322759..323739) /locus_tag="Rpic12D_3763" /inference="similar to AA sequence:KEGG:RS03675" /note="KEGG: rso:RS03675 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983694.1" /db_xref="GI:241665335" /db_xref="GeneID:8021450" /translation="MTALVIDVSRNSIRQSFSDKGIVGTLHHVLWFRIFRPVLVISIW GLLGLYVGYSISSVGPSGLPFEQLRLYGNIIAGMGGVLMVWMILSRLDRAIRRKVARV KAPVLTPAAAASRAALHPRQPAWQRPRNTRLLVVDHDDDGDITHVRSWQEWTGRPAPA GAATPPAAFVRSHEYDPDEPVLGASAVVAVEHAGRAEPSLSVAAAPVLQPGDVAVASD AITAEAAGFHRFGYRGRLGRNDWVDPQPATQSHALRPGMARYYGGVSAVVHGRAAVHA ADRETERRRSLHAFGAHAQLEDPYAALERAERIDPLHGFGRRANIVASES" gene complement(323736..325013) /locus_tag="Rpic12D_3764" /db_xref="GeneID:8021451" CDS complement(323736..325013) /locus_tag="Rpic12D_3764" /inference="protein motif:PFAM:PF00535" /note="PFAM: glycosyl transferase family 2; KEGG: rso:RSp0288 N-glycosyltransferase PgaC" /codon_start=1 /transl_table=11 /product="glycosyl transferase family 2" /protein_id="YP_002983695.1" /db_xref="GI:241665336" /db_xref="InterPro:IPR001173" /db_xref="GeneID:8021451" /translation="MDPLLAKRWISGFVFYYPFFMSYFWMIGGLLHYFLLERGTRRIQ HPLALLGVKTYPKVSIIVPCYNEEANVREVISHLARMRYPNYDIIAVNDGSSDRTGER LNELAAQYPQLVVIHQSSNQGKAIGLTTAAQVTDAEYLMCIDGDSILDVDAIAWMIRH LMENPAVGAVTGNPRIRTRSTLLGRMQVGEFSSIVGLIKRTQQVYGRLLTVSGVVVMF RKRAIEEVGYWSNDMLTEDIDISWKLQVGGWTIRYEPRALSWILMPETFRGLYKQRLR WAKGGIQALIKYAPAMLSLRQSMMWPIFFEYALSVVWAYNMLLVITWSVLGLFVDMPP EWRMEAFPRWHGTLLFITCVLQLLIGCFIDRRYDDGILRYFIDTVWYPVAFWILNLVT TVIGFPAVAFQRQRARARWTSPDRGIQQQGNSP" gene complement(325015..327153) /locus_tag="Rpic12D_3765" /db_xref="GeneID:8021452" CDS complement(325015..327153) /locus_tag="Rpic12D_3765" /inference="protein motif:PFAM:PF01522" /note="PFAM: polysaccharide deacetylase; KEGG: rso:RSp0287 putative hemin storage signal peptide protein" /codon_start=1 /transl_table=11 /product="polysaccharide deacetylase" /protein_id="YP_002983696.1" /db_xref="GI:241665337" /db_xref="InterPro:IPR002509" /db_xref="GeneID:8021452" /translation="MALTVALVLLGAVRPAAALQVDFLPKPDPDDGKTFRVLCFHDIR DNLRASFEKLPDGFAADTKMLTNMFSWLQANGYHPVTLAQIDAARHGGKPLPKRPILL TFDDGYESHYTKVFPLLKQFRFPAVFGLVTEWTNAPPGAKIKLSPKQIVDRDFFMNWN QIREMQASGLAEFATHTHDMHHGVLGNPQGNELPAAGTHEYLAKLGRYETDDEYRKRV HDDLKRSIDLIEKNIGAKVQTVVWPYGAHNQMLDQEAANVGLKYMLTLEPGPNTPDVP LTAIRRSLMGYDTDTGDLERSLREPVTHHGEINPVQRVVQVDMDYIYDPDPKQQEANL GKLIDRIKDLAPRVVYLQAFADPKGDGAVDAVYFPNRHMPMRADLFSRVAWQLKTRAK VEVYAWLPMLSFKLPANNPAATHLVQTLPGAPQKPGTVKPPRLSPFDPEARKMIRDIY EDLAKYAIIDGVLFHDDGVLDDYEDASPAALKAYEAMGLPGDINKIRQSPELMQKWTR GKTAALISFSHELISVVQGYQNGRDMLTARNIFASPVLDPKAEAWTAQNFDDFLKAYD YVALEAMPYMEDAKDPKEWMAKLTAAVAKHKGGLKKTIFELQAVDWRNKDKPIPTVEL RDQMRRLRSAGALNYGYYPDDFIAGRPDTEVLRDVMSLKTYIETRKAQPSAEKLNSGT SQPQAPAAAAEKKPPVTAEAAASSNHQAGG" sig_peptide complement(325015..325071) /locus_tag="Rpic12D_3765" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.968) with cleavage site probability 0.801 at residue 19" gene complement(327204..329669) /locus_tag="Rpic12D_3766" /db_xref="GeneID:8021453" CDS complement(327204..329669) /locus_tag="Rpic12D_3766" /inference="similar to AA sequence:KEGG:RSp0286" /note="KEGG: rso:RSp0286 putative hemin-binding outer membrane transmembrane protein" /codon_start=1 /transl_table=11 /product="putative hemin-binding outer membrane transmembrane protein" /protein_id="YP_002983697.1" /db_xref="GI:241665338" /db_xref="GeneID:8021453" /translation="MTAHEPTLRTLPAERTGASSAWYPRRCAIAAATVVVVGTTPMLA HAARDDASNAATRRLIEAELSDAASAGQTLHASTTVTAAGDDLPASPAGTLLIAQQPV SPADAPASASAPAPAPASDSMPAGAAAPSAAPSPTVILPPGAPSPDAAAQAPVVSPAP NPSGPSAQGPGTLEPLPVSPEAANAASTHAAGNPPENAPAGPMPTDRQAFHDEVMREA REGAATLAQEHLREHPDWFKESESWHIDHAAAAQRIRWGRQQLKVINGPERFVIIDQA VAEIEALLKKVPDTPENAEFRQAIVADEVVALASRGRMKDAVKRYEAMSQTGKVPAYT RVAAGDAYAYLDTPDKAAAAYARALKDAGPGEIETGDVQEALFYALLDTGRFEEARAL LDKMKADNPEYVRLAPEAGTPNPDYSRVKRLEAQYLVLTGRTHQGIAEMDKWRHEAPF AASLVSARADGAMVQAEPYRSREMYKTALAEHPDDLSVVAGYGRASLAVDDLKTAKDV ANGLDARFPENGSVRALRRDLDVYQSPQLVIQSTADKGNSVFANNEFGVDTKAYSGPI ADHYRLFFHNFSGRAEFDGTSESRVRNGAGVQWFDTGVEVNGEVHQSVGSAGKTGGTI DAAWMPSDHWKVSGMATTDDLEVPYKAYQVGVTGKTLSGNVRYTWDETRYASLTYGVS RYTDDNLRQRWGANFYQQLFVSPRHTVGLLLGADTSSSTKTGLNYFSPSRDYSGQATA IWSWTPWRYADKSFTQRVYLTGGMYNQQSFGTSPMLEARLEHVWQINRKTQVSYGIGF GRHRYDGQPENRKFLYLNLNIPL" gene complement(329745..330656) /locus_tag="Rpic12D_3767" /db_xref="GeneID:8021454" CDS complement(329745..330656) /locus_tag="Rpic12D_3767" /inference="protein motif:PFAM:PF00196" /note="PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: rso:RS03679 transcription regulator protein" /codon_start=1 /transl_table=11 /product="two component transcriptional regulator, LuxR family" /protein_id="YP_002983698.1" /db_xref="GI:241665339" /db_xref="InterPro:IPR000792" /db_xref="InterPro:IPR001789" /db_xref="GeneID:8021454" /translation="MKAVLLENHPLLRAGLAQLLAHPTLDLEVIAPGLPAGEPGELQP VDAHADLLVVGLDEIDVPVDATSLRRAIASSRARHVVLLAASVSAEEAHVAMTCGVDA YVAKSQSPEVLLATLRLVLAGGQSYPALMPRTANAAAPMLALNAAEAAQRLNVSLRQY EVLVLLSRGHSVKGVGRLLGISEATVKTHACTLYRRLNVRNKSEAVYAAMRLGIPLEL QGVAATSAPATAAPDEAAVFVATEQDAAQPRATALDAVMAHARPAPLDHGAESRWAAM TRAFGGLTPAQPMRVAVRTANGTARLG" gene complement(331202..331360) /locus_tag="Rpic12D_3768" /db_xref="GeneID:8021455" CDS complement(331202..331360) /locus_tag="Rpic12D_3768" /inference="similar to AA sequence:KEGG:RS03680" /note="KEGG: rso:RS03680 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983699.1" /db_xref="GI:241665340" /db_xref="GeneID:8021455" /translation="MTVIAGVVAAIPHTPIPLPFADGAWMLHVAAGLLFVVGAVDSLF LLAMRRDR" gene complement(331586..332581) /locus_tag="Rpic12D_3769" /db_xref="GeneID:8021456" CDS complement(331586..332581) /locus_tag="Rpic12D_3769" /inference="protein motif:PFAM:PF01370" /note="PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; short-chain dehydrogenase/reductase SDR; KEGG: pol:Bpro_4367 L-threonine 3-dehydrogenase" /codon_start=1 /transl_table=11 /product="NAD-dependent epimerase/dehydratase" /protein_id="YP_002983700.1" /db_xref="GI:241665341" /db_xref="InterPro:IPR001509" /db_xref="InterPro:IPR002198" /db_xref="InterPro:IPR005913" /db_xref="InterPro:IPR013120" /db_xref="GeneID:8021456" /translation="MGSTAGTGGAAPRILIIGANGQLGTELAVALAERYGHANVVTSD MVPRGRHAQIRHETLDVTDRGQLREIIERHGITQIYHLAAALSAAAEQSPTWAWQLNM NGLLNVLEAARQHGLERIFWPSSIAAFGPTTPRDATPQSTIMEPKTVYGISKLAGEGW CRWYFEHHGVDVRSLRYPGLISYKTAPGGGTTDYAIDIFHSVVKSERYTCFLEHDEAL PMMYMPDAVRATIELMEASADRITERGSYNLAGVSFTPAQLADEIRRHRPTFDVAYEP DFRQAIAASWPNSIDDSVARRDWGWQPQYGLAEMTADMLTNLAHLAPPGPPSATR" gene complement(332581..333810) /locus_tag="Rpic12D_3770" /db_xref="GeneID:8021457" CDS complement(332581..333810) /locus_tag="Rpic12D_3770" /EC_number="2.3.1.29" /inference="protein motif:TFAM:TIGR01822" /note="KEGG: reu:Reut_B4803 2-amino-3-ketobutyrate coenzyme A ligase; TIGRFAM: 2-amino-3-ketobutyrate coenzyme A ligase; PFAM: aminotransferase class I and II; aminotransferase class-III" /codon_start=1 /transl_table=11 /product="2-amino-3-ketobutyrate coenzyme A ligase" /protein_id="YP_002983701.1" /db_xref="GI:241665342" /db_xref="InterPro:IPR001917" /db_xref="InterPro:IPR004839" /db_xref="InterPro:IPR005814" /db_xref="InterPro:IPR011282" /db_xref="GeneID:8021457" /translation="MGTTAATASAHPSTDAFYAAIRRELEAIEEAGLYKTERIITSPQ GSVIHTADGKDVINLCANNYLGLSSHPEVLKAAHAALDSHGFGLSSVRFICGTQDLHK TLEARLARFLGTEDTILYGSAFDANGGLFETLLGPEDAVISDELNHASIIDGIRLCKA QRYRYQHNDLEDLRAQLVAADAAGARSKLVFTDGVFSMDGTIARLDEIRAICDEFGAL LGIDECHATGFLGKRGRGSHEHRGVFGKIDIITGTLGKGLGGASGGFTSARKEVVALL RQRSRPYLFSNTVAPCIVGATIKVLDLLEADTALRDKLEDSALYFRHRIVELGFDIKP GEHPIVPIMVYDAPKAQALSKRLLELGVYVIGFFYPVVPKGQARIRVQISAVHERAQL DAALQAFETAGKELGIL" gene 333898..334494 /locus_tag="Rpic12D_3771" /db_xref="GeneID:8021458" CDS 333898..334494 /locus_tag="Rpic12D_3771" /inference="protein motif:PFAM:PF01381" /note="PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: rme:Rmet_4806 transcriptional regulator, XRE family" /codon_start=1 /transl_table=11 /product="transcriptional regulator, XRE family" /protein_id="YP_002983702.1" /db_xref="GI:241665343" /db_xref="InterPro:IPR001387" /db_xref="GeneID:8021458" /translation="MAQAPATDALAGGPPAVGAKLQALRQARKLSLDELSRHAGVSKS MLSQVERNLANPTVAVLWRLATALGVSLADFLSPESAADAAPAVTVIPAHSIPVIKSP DGKCELKILGPVDLAARFEWYELAIQPGGMLASEPHELGAKEHLSVLNGTVTVQSGPS EKKVRHGETARYPVDVQHAISNAGKTVATALLVVEYAQ" gene complement(334500..335852) /locus_tag="Rpic12D_3772" /db_xref="GeneID:8021459" CDS complement(334500..335852) /locus_tag="Rpic12D_3772" /inference="protein motif:TFAM:TIGR00797" /note="TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: rso:RSp0283 DNA-damage-inducible F transmembrane protein" /codon_start=1 /transl_table=11 /product="MATE efflux family protein" /protein_id="YP_002983703.1" /db_xref="GI:241665344" /db_xref="InterPro:IPR002528" /db_xref="GeneID:8021459" /translation="MESSSVTSVAPTSPAWWHRRVLTLAFPIVLANLTQPILSAVDTA VAGHLPGPQFIGGVALGGVFFNFVFWGFGFLRMGTTGLVSQAHGAGDARALRASVVRA MLLAFAIGAALVALQVPAIRITLSLLGASESVTRMAEVYCHARIWSAPFALANYVVLG TLLGRQQVRRALLLQVFINTVNMVAVLGLVLGAGRGVGGIGAATALADVAGFALGALL LWLQRPVGLPTLTWSALLAGDAWRRLMGLNIDIFLRTLCLLAVFGWFAHAGARQGDVV LAANALLLNFLTFMAYGLDGFAHAAEALVGAALGGRDRHALRMAIRVSTFWSVLGAGV FAAVYAVAGPGIIGLLTDQAAVREAARQYLVWAALLPIVSVWGFQFDGVFIGATRTRE LLVTMALAAVAFWGLSLGLQPLWGNHGLWVAMLGFMALRGLMLGGLLSRVWGMVPQAA" gene 336213..337847 /locus_tag="Rpic12D_3773" /db_xref="GeneID:8021460" CDS 336213..337847 /locus_tag="Rpic12D_3773" /inference="protein motif:PFAM:PF00324" /note="PFAM: amino acid permease-associated region; KEGG: rso:RS03682 amino-acid permease transmembrane protein" /codon_start=1 /transl_table=11 /product="amino acid permease-associated region" /protein_id="YP_002983704.1" /db_xref="GI:241665345" /db_xref="InterPro:IPR004841" /db_xref="GeneID:8021460" /translation="MEKHVQRNLGAWPLMLTGLGSIIGSGWLFGAGHAAQVAGPAAIF TWVIGAIVILAIALTYAELGAMFPESGGMVRYARYSHGSLVGFVAAWANWIAIVTVIP IEAEASIQYMSSWPWAWAQALFQHGELTPLGLVLSALLVIVYFLLNYWGVKVFAKANN AITIFKFIIPVATAVALMAAGFHPGNFGMTEGGQRFAPYGWSAVLTAIATSGIVFAFN GFQSPINLAGEARNPGRNVPIAVIGSILLAAVIYVALQIAFLGAVPPASLVNGWHGID FHSPFAQLAIALNLNWLAIVLYIDAFVSPSGTGSTYMATTTRMIYAMERNNTLPAIFG RVHPVFGVSRPAMWFNLGVSFIFLFFFRGWGALAAVISVATVISYLTGPISVMSLRRT SPQLHRPLRLAGLSLVAPFAFVCASLILYWAKWPLTGEIIVLMLVALPVYFYYQAKAG WPDFKREVKGAGWMIAYLPTIAALSYCGSKEFGGLGWIPYGWDMGIVAAVSLGFYHWG VNSGWHTRYLDEVEHVHDDVQVRDTRRAPRAVPQRA" sig_peptide 336213..336317 /locus_tag="Rpic12D_3773" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.842) with cleavage site probability 0.724 at residue 35" gene complement(338111..339013) /locus_tag="Rpic12D_3774" /db_xref="GeneID:8021461" CDS complement(338111..339013) /locus_tag="Rpic12D_3774" /EC_number="4.2.1.1" /inference="protein motif:PRIAM:4.2.1.1" /note="PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bac:BamMC406_6037 LysR family transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LysR family" /protein_id="YP_002983705.1" /db_xref="GI:241665346" /db_xref="InterPro:IPR000847" /db_xref="InterPro:IPR005119" /db_xref="GeneID:8021461" /translation="MKVDLGDLNAFVAVAQAKGFREGARLMGASASGLSEAVRRLETQ LGVRLLNRTTRSVSPTEAGQRLLTRLRPALGEVEAALDVVNSFRERPAGTLKLNVPMS AARLVLPAIIPGFLAAYPEIQLEVVAEESFVDILAAGFDAGIRYDERLEQDMIAVPIG PRTQRFATAAAPGYLDRRGRPAHPRDLLDHACLRGRFASGAMPPWEFERDGEVVYVDP SGPLLVRIGGATDLVVDAAVAGIGVVHLYEDWLRPHLASGALEPVLEAWWRPFPGPYL YYPGRRLVPAPLRAFIDFIKVGTA" gene 339116..340000 /locus_tag="Rpic12D_3775" /db_xref="GeneID:8021462" CDS 339116..340000 /locus_tag="Rpic12D_3775" /inference="protein motif:PFAM:PF00248" /note="PFAM: aldo/keto reductase; KEGG: bvi:Bcep1808_6440 putative oxidoreductase" /codon_start=1 /transl_table=11 /product="aldo/keto reductase" /protein_id="YP_002983706.1" /db_xref="GI:241665347" /db_xref="InterPro:IPR001395" /db_xref="GeneID:8021462" /translation="MSPIVQSGTFSIGGHRVQRLGYGAMQLAGPGVFGPPKDRDAAHA VLREAVASGINHIDTSDFYGPHITNQLIREALHPYRDDLLIVTKIGAVRDDNGAWLPA FSTQALTDAVHDNLRNLGLDVLDVVNLRIMFDTHGPAEGSIEAPMTALAELQRQGLVR HIGLSNVTANQIAEGRRICDIVCVQNHYNLAHRNDDGLIDALARDGIAYVPFFPLGGF NPLQSSTLNAVAARLGATPMQTALAWLLHRSPNILVIPGTSSVAHLRENLGAAAMTLP GDAMRELDAVGLSTDEAA" gene complement(340115..340360) /locus_tag="Rpic12D_3776" /db_xref="GeneID:8021463" CDS complement(340115..340360) /locus_tag="Rpic12D_3776" /inference="protein motif:PFAM:PF05583" /note="PFAM: Albicidin resistance; KEGG: spe:Spro_1357 MerR family transcriptional regulator" /codon_start=1 /transl_table=11 /product="Albicidin resistance" /protein_id="YP_002983707.1" /db_xref="GI:241665348" /db_xref="InterPro:IPR008396" /db_xref="GeneID:8021463" /translation="MRENFNKRANAWPTLIAEVRQHLAKGTPPHAPAMQRLARQWISL FRSAAGGDPQTQAKMRLAKEPEPERSARPWMGPDLIA" gene 340655..342439 /locus_tag="Rpic12D_3777" /db_xref="GeneID:8021464" CDS 340655..342439 /locus_tag="Rpic12D_3777" /inference="protein motif:TFAM:TIGR00254" /note="KEGG: reh:H16_B1253 predicted signal transduction protein containingan EAL and a GGDEF domain; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein" /codon_start=1 /transl_table=11 /product="diguanylate cyclase/phosphodiesterase" /protein_id="YP_002983708.1" /db_xref="GI:241665349" /db_xref="InterPro:IPR000160" /db_xref="InterPro:IPR001633" /db_xref="GeneID:8021464" /translation="MTSSPLPLPPGIAPEMLRTVFQPIFRLSTAEVFGYEALLRGPAG STLESPAALFAAATDTAGAIALETTAARLAIERFSAMRLPGKLFLNFSAFGVHELLQD HARLLHAIADHDLQPSRIVIELTEQTPIDDLASFANALSVARDFGMQCALDDFGTGNA NLNLLIELTPDFVKLDKYFLRDIAKHPAKLEMTRSLQQTLKGSATSIIAEGLETEDEL GVVRDLGIRFGQGFFLARPLDKPAEDMSSHAARVLQSSQIAVFPQAVRVGWRAITAGK LLRVAPTLPLRCSNDDVLHLFNRHPDLHAVALLDEDERPLALIARRAFIDRYAMPYHR ELYGKKPALAFANRQPVLVEKSASLEDMSALLMSEDQRYLTDGFIITEHGRYLGLGTG EELVRTVTEIRIEAARYANPLTFLPGNIPLNLHIERLLEARTAFYACYVDLNHFKPFN DQYGYWQGDEMLKMAAAALADACEPTRDFLGHVGGDDFLILFQSADWRTRIEQAITIF NTNALAMYTPADRAAGGIHAEDRKGLPAFFRFVTMAVGALHVLPGAARNSDDIGTAAA LAKRRAKQSDNGFHIEALRPTLPVPATA" gene 342980..344398 /locus_tag="Rpic12D_3778" /db_xref="GeneID:8021465" CDS 342980..344398 /locus_tag="Rpic12D_3778" /inference="protein motif:PFAM:PF00754" /note="PFAM: coagulation factor 5/8 type domain protein; WD40 domain protein beta Propeller; KEGG: rso:RS03685 signal peptide protein" /codon_start=1 /transl_table=11 /product="coagulation factor 5/8 type domain protein" /protein_id="YP_002983709.1" /db_xref="GI:241665350" /db_xref="InterPro:IPR000421" /db_xref="InterPro:IPR011659" /db_xref="GeneID:8021465" /translation="MRNPLLSLDIIASAAFALFSATAQASCVVNPTTQSNSTFPASLT GKLAYHSYVSYGDGTSQIFIYDFAARTLTQVSNTTWGIQDPMNAVFSPDGKWLAFMGI KNNAWNVFFWQVGTSNLPINLTNSTGQTRNEDPKFSADGKSLLFKQNGDVMQAALSYT SSGPVFTSVVNLTRTAPGVENSMPFATPDGTAVYYATGTGSGMGLYKQTIGSTTNVAF DAPAGLATYYPIVRADGTVFYARWLDATSQADQIYTKVNPSDVPNQLPLNDCNSNNSD PSPVNGTNYVFFSSTTAGGYQLYLGDATTGQRWSLSQFGVNSDTTKAKLGSNYYAGTT VAAQAVTLLSQGKPASASSSYSPSFGPAYAFDGNTTSTRWDSIEGSAAGTQWLKVDLG SIRTITGVDLYWDAGAKVYSIQTSNDGVNWTSIYSTSKGAAWGHVSLANLKGSGRYVR MYGTQRATQWGYSLDEMQVWGY" sig_peptide 342980..343057 /locus_tag="Rpic12D_3778" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.921 at residue 26" gene 344571..346238 /locus_tag="Rpic12D_3779" /db_xref="GeneID:8021466" CDS 344571..346238 /locus_tag="Rpic12D_3779" /inference="ab initio prediction:Prodigal:1.4" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983710.1" /db_xref="GI:241665351" /db_xref="InterPro:IPR006311" /db_xref="GeneID:8021466" /translation="MPSRTPPHCNAPHGMSRRDFLTLGTAAAGLGALGVSLPDSAQAG AHAPDANWHAGQLAHLIPAASHDRFLIKASFQASLARAPWLMVNGRRVAGEQTGAAGR FWRFDVRGLQPATQYTLRIVDASGKPLADAWPLRTFPAPDATPARLRILAYTCAGGYD GPPVAGKTAWLDMAARRRLLARGMSFAPDTVIANGDHIYWDLQTSQNKPFAHQVRELM WAKFGGALDMSVPMWHPKNEAIFTRVCDYQISGLYGTTLRSTPAYFLTDDHDTFENDE FDDKVATLPPEPYGLVGAELTQHRYYPEFLPDANRPVWLPGGDKAGMPADTNSAFGTL RYGALLEAVLYDCRRFLDNKGIHARVVPQWVEDWLVARTRAEDTAHFFHVPSLPFAYS SGKLGDWYPDLLDRKTGRLVANQPKPGWQSGWHAQHQRLVAALAEQKQRAAVIVQGDF HASAAGSMSRSGDLAFAQPVHTVMTGTLGTGDLAFPSAFRSIETTPALSVAMQEALRP TEKNGFTIIDVTPEKMTFSLFMWRPPEPVEAIDTLQPALVYEVPRLA" sig_peptide 344571..344696 /locus_tag="Rpic12D_3779" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.714) with cleavage site probability 0.618 at residue 42" gene 346261..347274 /locus_tag="Rpic12D_3780" /db_xref="GeneID:8021467" CDS 346261..347274 /locus_tag="Rpic12D_3780" /EC_number="1.1.1.169" /inference="protein motif:TFAM:TIGR00745" /note="KEGG: rso:RS03188 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein; NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein" /codon_start=1 /transl_table=11 /product="2-dehydropantoate 2-reductase" /protein_id="YP_002983711.1" /db_xref="GI:241665352" /db_xref="InterPro:IPR003710" /db_xref="InterPro:IPR004455" /db_xref="InterPro:IPR011128" /db_xref="InterPro:IPR013332" /db_xref="InterPro:IPR013752" /db_xref="GeneID:8021467" /translation="MAKICIVGAGSIGCYLGGRLLAAGADVTLVGRARIGSELGAHGL TLTDYRGGRWRVPASGMPYVTDASAAASAELVLVTVKSAATPSVADELKPLLRPGTTV VSFQNGLGNADVLRAALPQHTVLAGMVPFNVMQPAPGAFHQGTGGELEVAASHALRPF VDDFRRAGLPLMERTDMMAVQWAKLLLNLNNAVNALANRPLKEQLSQRAYRRCLALAQ SEALRLLTRAGIRPARLTPVPPAWIPRLLATPDALFARLGGKMLAIDPLARSSMSDDL AAGRATEVDWINGEVVRLAERLGQQAPVNARLCALVHAAEAAVPRPNWSGPDLLAALR SGA" sig_peptide 346261..346329 /locus_tag="Rpic12D_3780" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.910) with cleavage site probability 0.776 at residue 23" gene complement(347271..347963) /locus_tag="Rpic12D_3781" /db_xref="GeneID:8021468" CDS complement(347271..347963) /locus_tag="Rpic12D_3781" /inference="protein motif:PFAM:PF00027" /note="PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; regulatory protein Crp; KEGG: reh:H16_B1400 transcriptional regulator CRP family" /codon_start=1 /transl_table=11 /product="transcriptional regulator, Crp/Fnr family" /protein_id="YP_002983712.1" /db_xref="GI:241665353" /db_xref="InterPro:IPR000595" /db_xref="InterPro:IPR001261" /db_xref="InterPro:IPR001808" /db_xref="InterPro:IPR012318" /db_xref="GeneID:8021468" /translation="MTSAFASNAWFQSLPLQAAQALLECAVPVPVAAGAFLFHQGDSM DGGSHAFFGVASGVLKLSIFNAEGDEAILALVEPGNWFGGVSTLDQQPRGHCAIALED AEVLGVSVEQFEALMRDAAFAGAIARLVATRLRLAYGSLASAALHATRARVARRIAML AHGDVSQSSEGRTTISTSQDALAMMLGISRQTLSKELQALVRLGAIRLRYGHIEIEDM AALLNATDTCVD" sig_peptide complement(347271..347327) /locus_tag="Rpic12D_3781" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.631) with cleavage site probability 0.629 at residue 19" gene complement(348128..348640) /locus_tag="Rpic12D_3782" /db_xref="GeneID:8021469" CDS complement(348128..348640) /locus_tag="Rpic12D_3782" /inference="ab initio prediction:Prodigal:1.4" /note="KEGG: rso:RS02107 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983713.1" /db_xref="GI:241665354" /db_xref="GeneID:8021469" /translation="MIPKRNVLAVDSVALVPATIAFARAVRHKPRYHAGYAPYVSAKP AAARLAERTTMDFDPDLEGLPLFAKPAFGWEDLASATPAEGSPAKVPRLRRWRGPITH WERGYRSHYYRDKRGKKLGEIHLSPRGQVPLVYRWLAGTLSGVEGSLSHARMRVEEAI GFGMRQMALF" sig_peptide complement(348128..348199) /locus_tag="Rpic12D_3782" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.646) with cleavage site probability 0.636 at residue 24" gene 348669..349268 /locus_tag="Rpic12D_3783" /db_xref="GeneID:8021470" CDS 348669..349268 /locus_tag="Rpic12D_3783" /inference="protein motif:TFAM:TIGR01806" /note="TIGRFAM: chorismate mutase; PFAM: Chorismate mutase; KEGG: bph:Bphy_7813 chorismate mutase" /codon_start=1 /transl_table=11 /product="chorismate mutase" /protein_id="YP_002983714.1" /db_xref="GI:241665355" /db_xref="InterPro:IPR002701" /db_xref="InterPro:IPR008240" /db_xref="GeneID:8021470" /translation="MTNLLKRPAARKGAALACACWLVAGCATQAGAQEGAFAPVLRHL ADRLLTADQVALSKWDSGQPVYDPAREAQVIANVSAMAPAYGVQAADAAEVFTDQIEA NKTVQYALLNDWRRAGSAPTAPRQSLPNTIRPQLDTLQKAILQGLHEAGPARARADCA TQVALDAERVAREKSLDTLHRVALDRATARLCRQRSARS" sig_peptide 348669..348767 /locus_tag="Rpic12D_3783" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.956 at residue 33" gene complement(349353..350831) /locus_tag="Rpic12D_3784" /db_xref="GeneID:8021471" CDS complement(349353..350831) /locus_tag="Rpic12D_3784" /EC_number="1.3.1.74" /inference="protein motif:TFAM:TIGR02037" /note="KEGG: rso:RS02108 protease signal peptide protein; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein" /codon_start=1 /transl_table=11 /product="protease Do" /protein_id="YP_002983715.1" /db_xref="GI:241665356" /db_xref="InterPro:IPR001254" /db_xref="InterPro:IPR001478" /db_xref="InterPro:IPR001940" /db_xref="InterPro:IPR008256" /db_xref="InterPro:IPR011782" /db_xref="GeneID:8021471" /translation="MTRQTLARSAAGLAAVIAVAGGYAYLQKDVITRAVAAPIAPVTT PQTSMATPAVAVAAPMDFSGIVERYGPAVVNISVTAHAQRTSMQGLPPGMSPDDPFAD FFKHFMPQMPQQRGDQIVRGLGSGFIVSSDGLILTNAHVVDGAQEVNVKLTDRREFKA KVLGVDKQSDVAVLRISAKNLPVVQIGSPANTKVGEPVVAIGSPYGFENTVTAGIVSA KSRSLPDDTYVPFIQTDVAVNPGNSGGPLFNQHGEVIGINSQIYSQTGGYQGLSFAIP IDVAMKVEQQLVATGKVTRGRLGIAVQEVDQSLADSFNLPKPEGALVNSVESDGPAAK AGLQPGDVILQINGARIDRSGDLPEQVADIKPGTTVPLQIMRQGKPTTLSVTVGAAKD AKVASNDKAAPNQGRLGLAVRPLQPDEKRQSGLPGGLVVMEASGPSAKVGIQPGDVIL SLNGTPVSSVQELRTLVERAGKHVALLVQRDDTKIFVPVDLG" sig_peptide complement(349353..349415) /locus_tag="Rpic12D_3784" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.995) with cleavage site probability 0.611 at residue 21" gene complement(350978..352294) /locus_tag="Rpic12D_3785" /db_xref="GeneID:8021472" CDS complement(350978..352294) /locus_tag="Rpic12D_3785" /inference="protein motif:PFAM:PF02518" /note="PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rso:RS02109 transmembrane two-component sensor kinase transcription regulator protein" /codon_start=1 /transl_table=11 /product="histidine kinase" /protein_id="YP_002983716.1" /db_xref="GI:241665357" /db_xref="InterPro:IPR003594" /db_xref="InterPro:IPR003660" /db_xref="InterPro:IPR003661" /db_xref="InterPro:IPR004358" /db_xref="InterPro:IPR005467" /db_xref="GeneID:8021472" /translation="MQSIRKTLLWWLAGGLLAGIVIATGLIYAQARQEANALFDYQMQ QMAAALPSQWIDPPPPALAAIARDDDVVIRIWDDSGRSLYLSHARPDLPERAELGFSD VRTAEGPWRVYSVAFGPAVVQIAQPYSARHEVAARMALRTVAPLLILLPLLGWIVWLA VGRGLAPLGLVATQVQARDAAALSPLPTQGLPDEIRPLTSALNDLLARLGTALAHQRA FVADAAHALRTPLAALKLQLQVADRAQSEEERRAAHADLHRGVERMIRLVGQLLTLAR QEPGAADPQRAPVALDAVAADVVAELSPAAIHKGIDLGIDVASQPASVLGSADALRVL LVNLVDNALCYCPRGSRVDVSTSHTPDGGVQLVVEDDGPGIPAEERERVLDRFYRPTH APTGGSGLGLAIVREIAQAHDAALALETREGGGLRVVLRFPFKAET" sig_peptide complement(350978..351067) /locus_tag="Rpic12D_3785" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.997) with cleavage site probability 0.603 at residue 30" gene complement(352298..353137) /locus_tag="Rpic12D_3786" /db_xref="GeneID:8021473" CDS complement(352298..353137) /locus_tag="Rpic12D_3786" /inference="protein motif:PFAM:PF00072" /note="PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: rso:RS02110 two-component response regulator transcription regulator protein" /codon_start=1 /transl_table=11 /product="two component transcriptional regulator, winged helix family" /protein_id="YP_002983717.1" /db_xref="GI:241665358" /db_xref="InterPro:IPR001789" /db_xref="InterPro:IPR001867" /db_xref="GeneID:8021473" /translation="MVDRVTIKASEPSRNRLTCALQFYNAPLLLSFFSVMRVLLVEDD DMIGDSVRKGLRHDGFTIDWVRDGEAALHAVTAPGAGGAEAGGTLFDLMLLDLGLPKR DGLEVVRELRQRGIVIPILILTARDAVADRVAGLNAGADDYLVKPFDLQELAARMHAL LRRQGGRADPLLRHGDVVLNPVTREVLRDGVPVKLSGREFAVLHALLARPGKVWSIAQ LQDNLYGWDEEVGSNTVEVYIHALRKKLGSHLIQNIRGVGYVIPRETSASPAEPASGE DHQ" gene 353155..353997 /locus_tag="Rpic12D_3787" /db_xref="GeneID:8021474" CDS 353155..353997 /locus_tag="Rpic12D_3787" /inference="protein motif:PFAM:PF01380" /note="PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: rso:RSp1556 putative transcription regulation repressor HexR transcription regulator protein" /codon_start=1 /transl_table=11 /product="transcriptional regulator, RpiR family" /protein_id="YP_002983718.1" /db_xref="GI:241665359" /db_xref="InterPro:IPR000281" /db_xref="InterPro:IPR001347" /db_xref="GeneID:8021474" /translation="MSAPQDTSSLAPPSTDLRERIRAARPSLSPAERQVADWVLRQPG TVLSLPVAAIAREAGVSQPTVIRFCRSMGCHGLSDFKLRLAQGNAAHDKPRGAAAPSN VPRSGTRVLQDTIDALAAMRDRFDPLALDAAVALVDTAHRIDLYGFGSSGVVARDAQT KFFRYGIPANAYSDPYLVSMSLNVLQAGDVVIAISKSGALPELQTAVERVRELGVHVI AVTAPGSPLAALADVVLPADVDIAATDRSMVARLLHLALLDALVLEVALRKGSAPQRA DLPE" gene complement(354020..355075) /gene="glk" /locus_tag="Rpic12D_3788" /db_xref="GeneID:8021475" CDS complement(354020..355075) /gene="glk" /locus_tag="Rpic12D_3788" /EC_number="2.7.1.2" /inference="protein motif:TFAM:TIGR00749" /note="KEGG: rso:RSp1557 glucokinase protein; TIGRFAM: glucokinase; PFAM: Glucokinase" /codon_start=1 /transl_table=11 /product="glucokinase" /protein_id="YP_002983719.1" /db_xref="GI:241665360" /db_xref="InterPro:IPR003836" /db_xref="GeneID:8021475" /translation="MSIGLHEVNAGTDADVTAYPRLVADVGGTNVRFALEMAPMRLAH IGVLAGDDYPSLESAMRAYLASLPPEIASAGVRHAAIGIANPVLGDQIRMTNRDWAFS IEAMRQSLGFDTFVVINDFAALAHALPYLPADELEQVGGDASLADAPRALLGAGTGLG VASLLPTPDGRYIAVAGEGGHVAFPPMNDEEVAIWRFARERFGHVSAERLISGMGLEL IYEALGACFDLWQQGPAVRRAADITAIALGEMEDAAGDHARCRYAVDTFCAFLGTIAA NLAVTLGARGGVYIGGGIVPRLGPAFANSPFRRRFEDKGRFSSYVAAMPVYVIHSPYP GLIGLCAAMDHAVAQGH" gene complement(355056..355760) /locus_tag="Rpic12D_3789" /db_xref="GeneID:8021476" CDS complement(355056..355760) /locus_tag="Rpic12D_3789" /inference="protein motif:TFAM:TIGR01198" /note="TIGRFAM: 6-phosphogluconolactonase; KEGG: rso:RSp1558 6-phosphogluconolactonase oxidoreductase protein" /codon_start=1 /transl_table=11 /product="6-phosphogluconolactonase" /protein_id="YP_002983720.1" /db_xref="GI:241665361" /db_xref="InterPro:IPR005900" /db_xref="GeneID:8021476" /translation="MTTRWHALADPAGQAKALAEAIASTLTHVINEQGRACLAVSGGR SPIALFAALRVQPLRWADVAVTLVDERAVPPEHADSNARLVHEHLLKDAAAAARFFPL VLPTHVHGGSVDVDACVATANDPFQQPDVVVLGMGDDGHTASLFPDAPELADGLDRAR APAYLPVRPPAAPHRRISLNLSALCAARRLFLSISGPVKRTVFDTATQGGTQPALPVS YVIHQREVPLDVYWTA" gene complement(355760..357229) /locus_tag="Rpic12D_3790" /db_xref="GeneID:8021477" CDS complement(355760..357229) /locus_tag="Rpic12D_3790" /EC_number="1.1.1.49" /inference="protein motif:TFAM:TIGR00871" /note="KEGG: rso:RSp1559 glucose-6-phosphate 1-dehydrogenase; TIGRFAM: glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase" /codon_start=1 /transl_table=11 /product="glucose-6-phosphate 1-dehydrogenase" /protein_id="YP_002983721.1" /db_xref="GI:241665362" /db_xref="InterPro:IPR001282" /db_xref="GeneID:8021477" /translation="MSVPAFDMVLFGGTGDLARRKLIPALFDAHQGGELHPRGRIFAI GTQPLETAGYLALLERETRPTMRLYSGAPVSDDAWASFADRVVYQQVDARKPEQFDAL AAALGEDRAPVTVCYLATAPGIFVDICAQLARVGLNTPNVRLVLEKPLGTDLASNERI NSAVAEFFAEDQIYRIDHYLGKESVQNLMAIRFGNALFEPLWRREWIKDVQITIAEQL GVEKRGDFYDGVGALRDMVQNHLLQLLCIVAMEPPSSLSQDAIRDEKLKILKALAPIP LQEVPEKTVRGQYLEGAIAGQPVQGYLHEQGIPPDSRTETFVAIKAEIANWRWAGVPF YLRTGKRMPQRLAEIVVRFHDVPHALFPKPLIQFPENRLVIRLQPEESIRLQFLTKAP GAALGLQPSTLDLDFTDHGGVRHAGAYERLLMDAVNGKLGLFVRRDEQAEAWRWVEPI IEAWNEARMPPKGYTAGSWGPAASSALLSRDGAAWHEEM" gene 357537..359375 /locus_tag="Rpic12D_3791" /db_xref="GeneID:8021478" CDS 357537..359375 /locus_tag="Rpic12D_3791" /EC_number="4.2.1.12" /inference="protein motif:TFAM:TIGR01196" /note="KEGG: rso:RSp1560 phosphogluconate dehydratase; TIGRFAM: 6-phosphogluconate dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase" /codon_start=1 /transl_table=11 /product="6-phosphogluconate dehydratase" /protein_id="YP_002983722.1" /db_xref="GI:241665363" /db_xref="InterPro:IPR000581" /db_xref="InterPro:IPR004786" /db_xref="GeneID:8021478" /translation="MAPQRLHDVVADVTQRIIDRSRGPRQAYLDVTRKNAGRKVERTL LSCTNLAHGFAAMPGEAKIRLKALERPNIGIVSAYNDMLSAHQPLDVFPAWIKETALE AGGTAQFAGGVPAMCDGVTQGQDGMELSLFSRDTIALSTAVALSHQMFDAALYLGVCD KIVPGLVIGALSFGHLPAIFVPAGPMTTGISNDEKARTRQLYAEGKLSRADLLEAESK SYHGPGTCTFYGTANSNQMLMEIMGLHLPGTAFINPNTPLREALTRESARQALRLVYS GTQYTPIADVLDERAFVNGIVGLLATGGSTNHTLHLIAMARAAGILLTWDDFHDLSGV IPLLARVYPNGKADVNEFQAAGGLSIVIRELLDAGLLHEDVTTIMGKGLRRHAQEPFL DNGKVVWRDGAAASLDTNIVRGVVEPFSPDGGLRVLHGNLGRSVIKVSAVKPEHRFVE APARVFHAQDDLIHAFKAGELERDFVAVLPYQGPAANGMPELHKLTPTLSVLQERGFK VALVTDGRMSGASGKVPAAIHITPEALNGGPLARVRDGDIVVLDAEAGTLSVRVPEAE WNARQVSVPDLAHYHAGVGRDLFSGFRRNVSAAEEGACTLFVSAGA" gene complement(359392..359847) /locus_tag="Rpic12D_3792" /db_xref="GeneID:8021479" CDS complement(359392..359847) /locus_tag="Rpic12D_3792" /inference="protein motif:PFAM:PF00582" /note="PFAM: UspA domain protein; KEGG: rso:RS02117 hypothetical protein" /codon_start=1 /transl_table=11 /product="UspA domain protein" /protein_id="YP_002983723.1" /db_xref="GI:241665364" /db_xref="InterPro:IPR006015" /db_xref="InterPro:IPR006016" /db_xref="GeneID:8021479" /translation="MYKKILVAVDGSETSKLALAEAVRLAKAFQSSVRAVYIVDSPAM LFDVGYYDPTELRKSFIQAGTQLLAETEETLKKDGVTQESALVETEGIGEDVAAALQR DAAKWGADVVVIGTHGRRGLAHAMLGSVAEKFIRQATMPVLLVRGPAKD" gene 359981..360448 /locus_tag="Rpic12D_3793" /db_xref="GeneID:8021480" CDS 359981..360448 /locus_tag="Rpic12D_3793" /inference="similar to AA sequence:KEGG:RS02118" /note="KEGG: rso:RS02118 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983724.1" /db_xref="GI:241665365" /db_xref="GeneID:8021480" /translation="MHRHPPAPTAELIAAYRSARYRVETPQGDVLLHLDAVNPCVAAL LAQADARWAVFVTAYQPFSRPVSAEENATRQAELLAWAIARGMPWLYGEGGAPEAASA SMAEAWAPEPSVLLFTDDPATADTLMLTFDQNAVVLCDAQGFCTLRWHPYLPD" gene 360548..361060 /locus_tag="Rpic12D_3794" /db_xref="GeneID:8021481" CDS 360548..361060 /locus_tag="Rpic12D_3794" /inference="similar to AA sequence:KEGG:RS02119" /note="KEGG: rso:RS02119 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983725.1" /db_xref="GI:241665366" /db_xref="GeneID:8021481" /translation="MELHMQSHHWERRMPDWLAASAAGLVGGALVIVLEFFWSTMVLN ESPWRPTHKIAAMVMGQGALEELSLFSFSIVGTALVLHFVLGAIMGMILGAIIAPFHF DSSVGMLAAIGLAFGIVAYVFNFYGMTAVFPWFASERGTGPLLANLLFGVTTAIVYGM VERRGQETMH" gene 361289..362437 /locus_tag="Rpic12D_3795" /db_xref="GeneID:8021482" CDS 361289..362437 /locus_tag="Rpic12D_3795" /inference="protein motif:PFAM:PF00116" /note="PFAM: cytochrome c oxidase subunit II; cytochrome c class I; KEGG: rso:RSp1564 cytochrome c oxidase polypeptide II" /codon_start=1 /transl_table=11 /product="cytochrome c oxidase subunit II" /protein_id="YP_002983726.1" /db_xref="GI:241665367" /db_xref="InterPro:IPR001505" /db_xref="InterPro:IPR002429" /db_xref="InterPro:IPR003088" /db_xref="InterPro:IPR009056" /db_xref="GeneID:8021482" /translation="MALAIALLLIVVLAVGFHVASPWWITPIASNWSRMDDTLAITLV ITGVLFIAINLFVVAALWRYRHREGHRAAYEPHNKRLEWWLVGITTAGVAALLAPGLF VYADYVRPPPNALRMEVLGQQWQWRFRFPGPGGKLGTTDVRYITDDNPFGMNPADPNG RDNYLIDTPELHLPLNRPIQVLARSRDVLHDFYVPPFRARMNMVPGMVTTFWFTPTKA GRYDILCAQLCGIGHSNMRGVVVVEDEAAFTRWLARQTTFEQSLQAKVQATPAAAGGS AQALADQGKALAQAKGCVACHSVNGNPGVGPTWKDLYGSTQTMADGTTAVADEAYLRA FIRDPKARVVKGFAPIMPNFNLSEQELSALIAYIKAQGGPAPASAAKP" gene 362450..364210 /locus_tag="Rpic12D_3796" /db_xref="GeneID:8021483" CDS 362450..364210 /locus_tag="Rpic12D_3796" /EC_number="1.9.3.1" /inference="protein motif:TFAM:TIGR02891" /note="KEGG: rso:RSp1565 cytochrome c oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I" /codon_start=1 /transl_table=11 /product="cytochrome c oxidase, subunit I" /protein_id="YP_002983727.1" /db_xref="GI:241665368" /db_xref="InterPro:IPR000883" /db_xref="InterPro:IPR014241" /db_xref="GeneID:8021483" /translation="MPYAHKEHDRGPQRFWTRYVWSQDHKVIAVQYALTAIAIGLVGL VLSNLMRLQLGFPGRFPFIDASHYYQFVTMHGMIMVIYLLTALFLGGFGNYLIPLMLG ARDMVFPFLNMLSYWVYLLAVLVLVASFFVPGGPTGAGWTLYPPQAILPGTPGTEWGI VLMLVSLAIFIIAATMGGLNYVTTTLQARTRGMTLMRMPLTVWGIFVATVLALLAFPA LFVSAIMMLLDKTLGTSFFVPAVVSMGQPLKHAGGSPLLFQHLFWFFGHPEVYIVALP AFGIVSDLISTHARKNIFGYRMMVWAIVIIGALSFVVWAHHMFIAGMNPYFGFFFATT TLIIAIPTALKVYNWVLTLWRGDIHLTVPMLFAIAFISTFLIGGLTGLFLGNVSVDIP LSNTYFVVAHFHMVMGVSPILVVFGGIYHWYPKVTGRMLNDTLGRAHFWITFIGTYLI YFPMHYLGILGMPRRYYAYEGYSFIPASAQSLNAFITVVALVVGVAQLLFLFNLAWSL KRGKPANANPWHATTLEWQTPQTPPVHGNWGPNLPQVYRWAYEYSPPDRTEDFVPQNE PPSGMPATESAPVHAREVRA" gene 364207..364815 /locus_tag="Rpic12D_3797" /db_xref="GeneID:8021484" CDS 364207..364815 /locus_tag="Rpic12D_3797" /inference="protein motif:PFAM:PF00510" /note="PFAM: cytochrome c oxidase subunit III; KEGG: rso:RSp1566 cytochrome-C oxidase oxidoreductase protein" /codon_start=1 /transl_table=11 /product="cytochrome c oxidase subunit III" /protein_id="YP_002983728.1" /db_xref="GI:241665369" /db_xref="InterPro:IPR000298" /db_xref="GeneID:8021484" /translation="MTTLPRPFMADLPPAMPSAGRIGLRVFMAVVTALFSLLILAYAM RMREADWLPVPRPVLLWWNTGVLALACAAMEIARRARTGRTPWLLSGGGLASWFVIGQ WMVWQQLSAHGQGVAVNPSDSFLYVFTGLHAAHVMGGIVVLAATIVRQHSHPDHTLPA VALCAAYWHFLLIVWLALLAAMWWITPAFVAAICGPSYGATP" gene 364812..365504 /locus_tag="Rpic12D_3798" /db_xref="GeneID:8021485" CDS 364812..365504 /locus_tag="Rpic12D_3798" /inference="protein motif:PFAM:PF00510" /note="PFAM: cytochrome c oxidase subunit III; KEGG: rso:RSp1567 cytochrome-C oxidase subunit III oxidoreductase protein" /codon_start=1 /transl_table=11 /product="cytochrome c oxidase subunit III" /protein_id="YP_002983729.1" /db_xref="GI:241665370" /db_xref="InterPro:IPR000298" /db_xref="GeneID:8021485" /translation="MSTPTLPTGSAEPLPGGWPGIVTDWSANGEAFKVPWGKAMMWIF LLSDTFVFSSFLIGYMAVRMSTTVPWPDTAEVFGMRIGGVEVPLLLIAIMTFVLISSS GTMAMAVNFGYRRNARRAAALMLATALLGATFVSLQAFEWTRLIVNEGVRPWGNPLGA AQFGACFFMITGFHGFHVTCGVIYLLLIARKILQPGFVERGNFQIVEIAGLYWHFVDL VWVFIFALFYLW" gene 365512..365859 /locus_tag="Rpic12D_3799" /db_xref="GeneID:8021486" CDS 365512..365859 /locus_tag="Rpic12D_3799" /inference="similar to AA sequence:KEGG:RS02124" /note="KEGG: rso:RS02124 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983730.1" /db_xref="GI:241665371" /db_xref="GeneID:8021486" /translation="MDHTDPSSKPAAPDAHGQQHSISVYLKIWGLLFVLSTLSYLVDY FRVEGLTRWVLIVALMIAKAGLIVSVFMHLMWERLALVYAILMPPLALLVLMVLMAAE AHHTFAMRTLFFH" gene complement(365881..367161) /locus_tag="Rpic12D_3800" /db_xref="GeneID:8021487" CDS complement(365881..367161) /locus_tag="Rpic12D_3800" /EC_number="2.5.1.48" /inference="protein motif:PRIAM:2.5.1.48" /note="PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: rso:RS02139 hypothetical protein" /codon_start=1 /transl_table=11 /product="Cystathionine gamma-synthase" /protein_id="YP_002983731.1" /db_xref="GI:241665372" /db_xref="InterPro:IPR000277" /db_xref="GeneID:8021487" /translation="MQNFPAILLFSCCPAMTGLTTALLHADREAGVEHYAVHKPLHTS TTYGYADTRELIEVFQGKPGYTYARQGNPTTAALEAKITMMEGGLATACFATGMAAIM AVFSTMLRSGDHVVSSAFLFGNTNSVFETLRNLGVDVTFVDATSTQAVADAIQPNTRL VFVETIANPRTQVADLKGIGALCKERGLIYVIDSTMTSPWLFRGRDAQASLMVHSLSK YIGGHGNALGGAVVDTGLFDWTAYPNIFPAYRKVKPEMQGIQQIRKKGLRDQGATLIA DAAHRIAVGAETMALRVDRTCSNALALARALAAHPKVARVYYPGLAEHPQHARATELF RHYGGLLSFELVDGADYVDMLNHLRYAVRATHLGDTRTLVIPVAPTIYWEMGAERRAS MGIADSLVRVSVGIEDEADLLGDFIQALDATPVA" sig_peptide complement(365881..365961) /locus_tag="Rpic12D_3800" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.976) with cleavage site probability 0.875 at residue 27" gene 367239..370184 /locus_tag="Rpic12D_3801" /db_xref="GeneID:8021488" CDS 367239..370184 /locus_tag="Rpic12D_3801" /inference="protein motif:PFAM:PF00005" /note="PFAM: ABC transporter related; response regulator receiver; ATP-binding region ATPase domain protein; ABC transporter transmembrane region; SMART: response regulator receiver; AAA ATPase; KEGG: bpt:Bpet2380 ABC transporter, ATP-binding protein" /codon_start=1 /transl_table=11 /product="response regulator receiver protein" /protein_id="YP_002983732.1" /db_xref="GI:241665373" /db_xref="InterPro:IPR001140" /db_xref="InterPro:IPR001789" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR003594" /db_xref="InterPro:IPR017871" /db_xref="InterPro:IPR017940" /db_xref="GeneID:8021488" /translation="MTSASPPPPSTQDASLQQRMLIALWRAIWRYRKRVMAAVALLVL AKLCAVGVPIVLKWIVDGFGEAARARVFPAFLLLAYAVLRFGGTLFGELRDMVFSRVS QPTVAAFMAQAFEHLHQLGPRFHASRQTGGLIRDVERGTTGIEFLLGVALFTILPTMV EIGSVLVIMMSRYSGWYLVTIGLTFGAYCTATVLLTRRRVRLQRQMNEFDSMAGSRLL DSMLNHEAVKVYTAERFEARRYRDILRQRIETAVANQRALSLLHVSQSGVIAGGVATV MLLAGQDVSRGVLSVGDLVLINAYIIQVCLPLNALGFMFREAKDAAINAERLFHLLEQ RPDVMDLPNGAPLRVTQGDVQFDHVAFGYEAARPILHDLSLHIPAGHTVAVVGGSGSG KSTLARLLLRFYDPWAGRVSIDGQDLRVVTQDSVRRAIGIVPQDTILFNDTIAYNIAY GREGATLAEVMEAARAAYVHDFIAALPEGYQTMVGERGLKLSGGEKQRIAIARALLKN PSILIFDEATSALDTRSERAIQRELDRLSAHRTTLVIAHRLSTVVDAHEIVVLEQGRI VERGRHTDLLAADGVYAQLWTLQRQQSDLEQAQHRLAQQPISLVALVVSVLDGLREAI DARRITVYSVIRSETPSITGDPSRLQGIVADVLSHAVLASHPGSRIEIVLERVEGMAQ LRVTDTIAIPAAADAAIPRAVRPPAEPAPEAVRSAVGPASSASSPGPFDVLDPVEPLT PLPQGPGPGPFDAAADEDTVSAPAATLDPLWIRSVVEQHGGRFAVVPLPHGDGTTYVM DFPIRAVAPLPSGPSGVETMPAPRQQTALPPSDALAGVHVLIVDDQEDAREMLQLLLE AYGATVTAYAAAKPALAALRAARGNSWPDVLVSDIALGDDEDGYALLRAVRLLETERD MPLDARLPAVALSGYDRPEDRTRALLAGFQMHLAKPTERGELVTAILSVIRARHAPAR PSHASMPSH" gene 370198..370737 /locus_tag="Rpic12D_3802" /db_xref="GeneID:8021489" CDS 370198..370737 /locus_tag="Rpic12D_3802" /inference="ab initio prediction:Prodigal:1.4" /note="KEGG: bpt:Bpet2378 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983733.1" /db_xref="GI:241665374" /db_xref="GeneID:8021489" /translation="MSMLADFDPTTHTHACTHGPASHFAGAHAVRRAVEMAMPLITQA MARPQEVGDSGFLHIVVMDPARSPGDGPFEDAVLCEYSVGDRSRWDADYAAYARAKAR LAWQHGMSTHALQTLRPHVLRASDTNLWGSAVLDGIVVGVSGALPFYDEAFAHVVAAC LRAIAKQAAAAAAGTLRLA" gene 371087..372400 /locus_tag="Rpic12D_3803" /db_xref="GeneID:8021490" CDS 371087..372400 /locus_tag="Rpic12D_3803" /inference="protein motif:PFAM:PF00534" /note="PFAM: glycosyl transferase group 1; KEGG: reu:Reut_B4390 glycosyl transferase, group 1" /codon_start=1 /transl_table=11 /product="glycosyl transferase group 1" /protein_id="YP_002983734.1" /db_xref="GI:241665375" /db_xref="InterPro:IPR001296" /db_xref="GeneID:8021490" /translation="MRIAMVSEHASPLADLGGVDCGGQNVYVRHVARQLARLGHRVDV FTRREGPGQADAVTFDHGCRVIHVPAGPAAVLPKEALLPHMHAFGRHLLNQCAQARAA GDGYDVIHANFFMSGLASLGAAARLHVPLVTTFHALGRVRRLHQGRADGFPDARFAIE DTLVQRSDRIIAECPQDQDDLETLYHARTEQIDVVPCGFDAAEFAPIDRAQARRLLGV PADAFVVLQLGRMVARKGVDNVIEAIGKLPPDVRKRVRLYVVGGNSVTPDVAATPELG RLQRVAAEAGVTGLTVFVGKRGRTDLRAWYSASDVFVSTPWYEPFGITPVEAMACGRA VIGADVGGIRSTVRHGRTGFLVPPKDPQALAARLLQLMQQPELCRELGQAGLVRARML YTWLGVAGQLERAYLKAIDTCSRATARVDGTAPSANADVPAGLAA" gene 372397..373212 /locus_tag="Rpic12D_3804" /db_xref="GeneID:8021491" CDS 372397..373212 /locus_tag="Rpic12D_3804" /inference="protein motif:PFAM:PF00106" /note="PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: cti:RALTA_A0585 putative short-chain dehydrogenase/reductase" /codon_start=1 /transl_table=11 /product="short-chain dehydrogenase/reductase SDR" /protein_id="YP_002983735.1" /db_xref="GI:241665376" /db_xref="InterPro:IPR001509" /db_xref="InterPro:IPR002198" /db_xref="InterPro:IPR002347" /db_xref="InterPro:IPR013968" /db_xref="GeneID:8021491" /translation="MNERHSTHGSFSPHTHAAMTQTDLHSNPNVTPALRDQVIVITGA GRGLGAAISRVLSAEGATVVSTDYDAATADRTAAELIAEGGQSHAIALDVGDESAVRG ALDEVVDRFGRLDAVINNAAIDITLPIEALNVEDWDRVVRTNLRGPFLLAKHASTLMR QRGSGAIVNIASTASRRAWPNASVYHATKWGLLGLSHALHAELRPHGIKVSAVIAGGM RTPFLLDRFPDIDVGNLQDPANVAAAVRFVLLQPAETVIPEVMVLPMRETSWP" gene 373203..373817 /locus_tag="Rpic12D_3805" /db_xref="GeneID:8021492" CDS 373203..373817 /locus_tag="Rpic12D_3805" /inference="protein motif:TFAM:TIGR01656" /note="TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: reu:Reut_B4387 histidinol-phosphate phosphatase" /codon_start=1 /transl_table=11 /product="histidinol-phosphate phosphatase family protein" /protein_id="YP_002983736.1" /db_xref="GI:241665377" /db_xref="InterPro:IPR005834" /db_xref="InterPro:IPR006543" /db_xref="InterPro:IPR006549" /db_xref="GeneID:8021492" /translation="MALMRAAYMPPRPSRGAAVFLDKDGTLLKDVPYNVDPAQIALAP GAGDGLRLLASTGLPLIVVSNQPGVALGYFKAEALQTVARHLAALFAAHGARLGGFHF CPHAPLPDGRVDCTCRKPADGLLREAAVSHGVDLDRSWMIGDILNDVEAGRRAGCRTI LIANGNETHWQPGTLRVPDYIVGRFDEAAAIVVAQHAACGRAVA" gene 373814..375025 /locus_tag="Rpic12D_3806" /db_xref="GeneID:8021493" CDS 373814..375025 /locus_tag="Rpic12D_3806" /inference="protein motif:PFAM:PF01075" /note="PFAM: glycosyl transferase family 9; KEGG: cti:RALTA_A0587 putative lipopolysaccharide heptosyltransferase, glycosyl transferase, family 9" /codon_start=1 /transl_table=11 /product="glycosyl transferase family 9" /protein_id="YP_002983737.1" /db_xref="GI:241665378" /db_xref="InterPro:IPR002201" /db_xref="GeneID:8021493" /translation="MSVAGIPDRRAVWANASRILCVRPDNLGDVVMTTPAFHALKAAA RADGARRHLTLLTSRAGATAVPHLSDIDDVIACDVPWAKHANAADADQTGALVDTLGQ GAFDAAVIFTVHTQNPLPAAMLCFLAGIPLRLAHCRENPYALLTDWIADADARIAATA PGDVRHEVRRQLDLVAQVTAVPPHLPHRLRFTVRPADRDTVRTKLSARGIRHDAPWIV LHPGATAASRRYPPDRFARIARALAARYGCPVLVTGAPAEAELVQQVCRPGLVAGQPV LDLAGALTLGELAALIEGAALLVSNNSGPVHLAAATLTPVVDLYALTNPQHTPWAVPH AVLSHQVPCRYCYRSVCPLGHQACLTGVAEDDVIAAAQGLWQPTRVAQALWPQRASPA PSATGAMTPVA" gene 375065..376894 /locus_tag="Rpic12D_3807" /db_xref="GeneID:8021494" CDS 375065..376894 /locus_tag="Rpic12D_3807" /inference="protein motif:PFAM:PF02543" /note="PFAM: Carbamoyltransferase; KEGG: bph:Bphy_5247 carbamoyltransferase" /codon_start=1 /transl_table=11 /product="Carbamoyltransferase" /protein_id="YP_002983738.1" /db_xref="GI:241665379" /db_xref="InterPro:IPR003696" /db_xref="GeneID:8021494" /translation="MDVKPLYTLGINAAYHDSSATLVRDGVVIAAAEDERFTHVKHAK RPVPFSTWQLPYHAIDYCLAEAGIDLARVDQVAYSLDPAKLTDLPTHAHIALPLQPSA QTDLPAGAAPWDPLFLSYVMNAPRQLADGAPHHLRARFANVKHNGPFRWSFIEHHLAH EASAFLAAPFDDCAVLTMDGRGERVTTSYGLFRDGEYTRLQQVDLPHSLGLLYEEVTD YLGFLRSSDEYKVMALASYGQPRHVDTFRQMVTTGADGRYTVAPLRLEEHFGPPRQRG GPMEARHFDIARSLQQVLEETVLTMSQWLHQATGARHLAMAGGVALNCVMNARVRDRG PFEQVWVQPAAGDAGTSLGAALWTDYQARGNRQRLWKMDHAYLGPAYADEDIEQFLTW SKLPFERLDNIAEQTADLLAQGQVVGWFQGRMEFGPRALGARSILASPIPADMQARLN EIKDREDFRPVAPVVLEERAADWFVGAQPAPFMLFVFDVREDRAAQIPAVRHVDGTAR VQTVNRRQHPLYYDLLAAFERRTGVPILVNTSFNTRGEPMVCSPRDAVESFWTSPLDA LVIGPFLLRKTAVRPEPPHAGSEGETARSGGGLRRVPGLAGVA" gene 376891..377925 /locus_tag="Rpic12D_3808" /db_xref="GeneID:8021495" CDS 376891..377925 /locus_tag="Rpic12D_3808" /inference="protein motif:PFAM:PF00535" /note="PFAM: glycosyl transferase family 2; KEGG: cti:RALTA_A0589 putative glycosyl transferase, family 2" /codon_start=1 /transl_table=11 /product="glycosyl transferase family 2" /protein_id="YP_002983739.1" /db_xref="GI:241665380" /db_xref="InterPro:IPR001173" /db_xref="GeneID:8021495" /translation="MNWPMPFDVSHVTPPRTAPAMSVIIATWRRPQMLQRCLDGLLAQ TFDAHRLELVVADDGPDDATHAVVERFAAAAPVWRVRYVPVHDTQGPAAARNRGWQAA TGDIIAFTDDDTIPAPTWLAEGWRVMSGCDGSAPPDAATGAVRIPLPALPTDYERDAS GLMHAEFVTANCFVRRAMLERISGFDERFRLAWREDSDLQFRMLDAGGRIVHAPAAVM HHPVRPAPWGVSVSQQRKVFYDALLYKKHPQRYRARIRPVPPWHYYGMGAAVLVAVAA AAARMPWGAAAAALVWFALTVRFAAMRLRGTAHTPRHVLEMLWTSIAIPPLALYWRAR GAWHFRVWFL" gene 377922..379067 /locus_tag="Rpic12D_3809" /db_xref="GeneID:8021496" CDS 377922..379067 /locus_tag="Rpic12D_3809" /inference="protein motif:PFAM:PF01075" /note="PFAM: glycosyl transferase family 9; KEGG: bph:Bphy_5245 glycosyl transferase family protein" /codon_start=1 /transl_table=11 /product="glycosyl transferase family 9" /protein_id="YP_002983740.1" /db_xref="GI:241665381" /db_xref="InterPro:IPR002201" /db_xref="GeneID:8021496" /translation="MTPAADLLRNARRIAVFRALQLGDMLCAVPALRALRAAAPHAHI TLIGLPWARQFQQRYAELLDDFVIFPGGPGFPEAGPGDTATTRGFLADLRARRFDMAI QLHGSGPRSTEVVRQFGAAHVFGFQPGGAIGRQTHAALLPWPSQLPEAQRLLTLLTHL GAPAVPATPDFPLMRDDYAEALALLRRHGLDRDRLVCLHPGARMPTRRWWPERFAAVA DTLAVSGFHVVITGAPSEVDLVEDVRSRMRQPAASLAGQTSLGGLAAVLRLARLLICN DTGVSHVAAAVRAPSVVVACGSDVARWAPSDRRLHRVLASHPPCRPCMHWRCPTGHEC ARDVTVREVLDAAYGALFDPEVQMRNPPAALPSAEPTTASTTSRGPT" gene 379064..380056 /locus_tag="Rpic12D_3810" /db_xref="GeneID:8021497" CDS 379064..380056 /locus_tag="Rpic12D_3810" /inference="similar to AA sequence:KEGG:RALTA_A0591" /note="KEGG: cti:RALTA_A0591 putative glycosyl transferase, group 1" /codon_start=1 /transl_table=11 /product="putative glycosyl transferase, group 1" /protein_id="YP_002983741.1" /db_xref="GI:241665382" /db_xref="GeneID:8021497" /translation="MSRPASRRLRILTWHVHGNYLYYLSQVPHDFYLVTRPPDAEGRV PPGYAGKVGALPWGDNVHEVPSDAVAGQTFDAVLFQSRTHWEQDRATVLSAAQRALPT IYLEHDPPQDHPTNTRHWVQDPNVLLVHVTPFNALMWDSGVTPTRVIEHGVHLPVPAC YSGELARGIVVVNHLRKRGRRLGADVFDALRCQVPLDLVGMGAQDAGGIGEISNLDLP AVCARYRFFFNPIRYTSLGLSVVEAMTIGMPIVGLATTEMTTVIQNGHNGYVDTRPDV LAGVMQALLRDPALARRWGEAAQETARTRFGIDRFVADWLHAFHTITATRKEAA" gene 380053..381075 /locus_tag="Rpic12D_3811" /db_xref="GeneID:8021498" CDS 380053..381075 /locus_tag="Rpic12D_3811" /inference="protein motif:PFAM:PF01370" /note="PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; dTDP-4-dehydrorhamnose reductase; KEGG: cti:RALTA_A0582 putative NAD-dependent epimerase/dehydratase; putative dTDP-glucose 4,6-dehydratase; putative UDP-glucuronate decarboxylase 3" /codon_start=1 /transl_table=11 /product="NAD-dependent epimerase/dehydratase" /protein_id="YP_002983742.1" /db_xref="GI:241665383" /db_xref="InterPro:IPR001509" /db_xref="InterPro:IPR005913" /db_xref="InterPro:IPR013120" /db_xref="GeneID:8021498" /translation="MRHHGEAHHPGHPEPHHHWRDQRRVLVTGGAGFLGSHLCDRLLR DGHDVLCVDNFYTGTKRNIAHLLSHPRFEVLRHDVTFPLYVEVDDIYNLACPASPIHY QHDPVQTTKTSVHGAINMLGLAKRVGARILQASTSEVYGDPHQHPQTEAYWGNVNPIG VRSCYDEGKRCAETLFMDYRRQHGLDVKVARIFNTYGPRMHPNDGRVVSNFIMQALAG EPITLYGDGLQTRAFCYVDDLIDALVRLMNTPADFAGPVNLGNPHEMSMLDIARQIVT CTRSNSALVFHPLPQDDPTQRCPDITLARDKLGWEPHTALEVGLARTVAYFRQQFFLA PQPVMA" gene complement(381097..382020) /locus_tag="Rpic12D_3812" /db_xref="GeneID:8021499" CDS complement(381097..382020) /locus_tag="Rpic12D_3812" /inference="protein motif:PFAM:PF00535" /note="PFAM: glycosyl transferase family 2; KEGG: cti:RALTA_A0580 putative glycosyl transferase, family 2" /codon_start=1 /transl_table=11 /product="glycosyl transferase family 2" /protein_id="YP_002983743.1" /db_xref="GI:241665384" /db_xref="InterPro:IPR001173" /db_xref="GeneID:8021499" /translation="MQTLDDARTAQPPCSIVVLTHNRAATVLDTLGQLTALGEPWPII VVDNGSTDGTADQIAARFPDVTLVRAPRNYGAAGRNVGAASANTPYVAFCDDDTAWLP GSIGRAVTVLQRYPAVGVVAAHIVVGPTRRDDPACEPMAASTLPADGLPGPALLGFMA GACVVRARAFSEAGGYQRDLFIGGEESVLALDLVDAGWHIVYCREVVTHHNPSPVRDV MQRRALLARNELLSAWLRLPSDLAWRVTGRALRAMVEQGVLAEALPGALVRLPRTLLR RHTVQPCTVALWRQMDADRQRRRAIPTLSIG" gene complement(382004..382726) /locus_tag="Rpic12D_3813" /db_xref="GeneID:8021500" CDS complement(382004..382726) /locus_tag="Rpic12D_3813" /inference="protein motif:PFAM:PF02585" /note="PFAM: LmbE family protein; KEGG: bph:Bphy_4725 LmbE family protein" /codon_start=1 /transl_table=11 /product="LmbE family protein" /protein_id="YP_002983744.1" /db_xref="GI:241665385" /db_xref="InterPro:IPR003737" /db_xref="GeneID:8021500" /translation="MSRALHDRVARLGPVLVISPHFDDAIFSCGNLLAAHHGSHTITV FGGAPPAPVSTEWDSGAGFADSTEAIAVRWVEDAQAHAQVSATAHHLAFCDSQYGQPP DAMELHRALHRLVARYAADAVFMPLGLFHSDHVLVHEAALSLLPRLPQRLWIGYEDAL YRRARGAVQDRIVALAGQGIVATPVCPTSATDGRQKRRAVACYASQLRAFGPGGLEDV HQPERFWLLEPRQGDPDHANAG" gene complement(382723..382878) /locus_tag="Rpic12D_3814" /db_xref="GeneID:8021501" CDS complement(382723..382878) /locus_tag="Rpic12D_3814" /inference="ab initio prediction:Prodigal:1.4" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983745.1" /db_xref="GI:241665386" /db_xref="GeneID:8021501" /translation="MNAVVLHGMGNIRLKGVRGPILRVPPQPGWDQVRLDAEATRGDG AARASHP" gene complement(382964..384235) /locus_tag="Rpic12D_3815" /db_xref="GeneID:8021502" CDS complement(382964..384235) /locus_tag="Rpic12D_3815" /inference="similar to AA sequence:KEGG:Reut_A1581" /note="KEGG: reu:Reut_A1581 natural resistance-associated macrophage protein" /codon_start=1 /transl_table=11 /product="natural resistance-associated macrophage protein" /protein_id="YP_002983746.1" /db_xref="GI:241665387" /db_xref="GeneID:8021502" /translation="MPVTDDAPWYRRLGPGLITGAADDDPSGIATYAQAGAQAGTSML WTLLLTLPLMIAIQLVSARLGRVSGRGVVANIRRHHSPWLAYAFVALVTLANIINVGA DIAAMGDSVRLLLGGSTVWYACAFAAVSLLVQVWMPYRRYARYLQWTALSLLAYVATA FVVKVDWLHALHDTVVPQLRWSKEYVMTLIAVFGTTISPYLFVWQAAGEVEETRLGEG EAPLKKAPWQAPWQLARIRIDTTVGMLVSAFIAFCIMLTAAYALHIHGVTQIETCAQA AEALKPVAGRFAQMLFALGVVGTGLLAVPVLAGSAAYAAAEAFQWHSSLESNVQGAPK FYLFLALVMAAATAMVFLPIEPFKLLYWAAVLNGVAATPVMVVLQLMSRRKTVMGQFR SSPLLHGAAWAATLCMCVSTVLFFVLAAHGS" gene complement(384249..384515) /locus_tag="Rpic12D_3816" /db_xref="GeneID:8021503" CDS complement(384249..384515) /locus_tag="Rpic12D_3816" /inference="similar to AA sequence:KEGG:Reut_B4638" /note="KEGG: reu:Reut_B4638 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983747.1" /db_xref="GI:241665388" /db_xref="GeneID:8021503" /translation="MRDKQQKENRDADQRKADWEQAESHRKPGDRPANAEVGRTGSTA PKPQSPHDTLRRMRQGEVPPGITRDKLHDPGRETPEAPPADNRS" gene complement(384551..385042) /locus_tag="Rpic12D_3817" /db_xref="GeneID:8021504" CDS complement(384551..385042) /locus_tag="Rpic12D_3817" /inference="similar to AA sequence:KEGG:Bxe_A2030" /note="KEGG: bxe:Bxe_A2030 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983748.1" /db_xref="GI:241665389" /db_xref="GeneID:8021504" /translation="MDTLLFLFGEGKDLNPLQTAMRAVVVFAIGLALVRLSGRRSFGQ RAPFDFVVAVLLGATLSRAIVGASPFVATVSASLALVAVHRLLGWACARLPRLDRLIA GRKREVYRHGRFDQHQLDAALLTIGDVEESVRQTLGARTLDDVEAAILERNGQVSLIR KRS" gene 385197..386057 /locus_tag="Rpic12D_3818" /db_xref="GeneID:8021505" CDS 385197..386057 /locus_tag="Rpic12D_3818" /inference="protein motif:PFAM:PF00106" /note="PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: azo:azo1732 short-chain dehydrogenase family protein" /codon_start=1 /transl_table=11 /product="short-chain dehydrogenase/reductase SDR" /protein_id="YP_002983749.1" /db_xref="GI:241665390" /db_xref="InterPro:IPR002198" /db_xref="InterPro:IPR002347" /db_xref="InterPro:IPR002424" /db_xref="InterPro:IPR013968" /db_xref="GeneID:8021505" /translation="MPDTPAQQPPQHQDRQPGTQEDMTPRPRADMEDYVGSGKLKDKV AIVTGGDSGIGRAVAIGFAKEGADVLIAYLDEHDDANQTCRLVRATGRRCEAIAGDLG DEAHARAVVTQAVAMFGKIDIVVSNAAEQHPQQSLADINADQLERTFRTNVFAMFHLL RAALPHLHEGARIITTTSVTAFRGSGHLVDYAATKGAILAFTRSLAQQLAEKNILVNA VAQGPIWTPLIPSTFDAEHVVQFGSKEPLARAGQPDEVAPCYIFLASADASYMTGQTL HPNGGEIVNG" gene 386379..389585 /locus_tag="Rpic12D_3819" /db_xref="GeneID:8021506" CDS 386379..389585 /locus_tag="Rpic12D_3819" /inference="protein motif:PFAM:PF00873" /note="PFAM: acriflavin resistance protein; KEGG: rso:RS02154 transport transmembrane protein" /codon_start=1 /transl_table=11 /product="acriflavin resistance protein" /protein_id="YP_002983750.1" /db_xref="GI:241665391" /db_xref="InterPro:IPR001036" /db_xref="InterPro:IPR001220" /db_xref="GeneID:8021506" /translation="MWIVQLALRRPLTFIVLALLILLATPFTLMRTPTDIFPEIDIPV VSIIWNYNGLPAKEMADRIVSVTERSLTTTVNDIEHIESQSLNGISIVKVFFQPTANI QTALAQIVSVSQAQVRQLPPGTTPPLIIKYSASSIPILQLGLSSNTLSEQELNDAALN FLRPRLITVPGIAVPFPYGGKSRQITVDLDTQKLLAQGLTPVDIVNAVGAQNLILPAG TQKIDATEYGVTLNGTPGSIAALNAIPVKTSNGATLYLGDVAHVRDGFSPQTNVVRQD GQRGVLLSILKNGGASTLDIVSNIYKLLPTAAAALPQDIKITPLFDQSLFVKAAIEGV IREALIAACLTAAMILLFLGNWRSTAIIAVSIPLSILSSIIVLHLLGETINLMTLGGL ALAVGILVDDATVTIENIERHLHEGKEPVTAILDGAAEIAVPAFVSTLCICIVFVPMF FLTGVARYLFVPMAEAVIFAMLASYVLSRTLVPTLVMMLMTGRTQNATKADAKPGTFG RIYRAFNTQFEHMRGNYAAILGGLLERRRVFALSFLGFCVASCALFLVLGRDFFPDVD AGQIRLHMRAPSGMRIEETARLADEVETAIREIIPKKELSTILDNLGVPNSGINLSYS NAGTIGTLDGEILIALQEGERKPSAQYVRRLREELPKRFPGVEFAFQPADIVSQILNF GLPSAIDVQFSGADVATNKQLAGMLANRIKQIPGAVDTHVHQRFDQPTLALNMDRTRI QQVGLEGRDVAQNLLVSLSSSFQTSPTFWLNPINGVVYQVAVTSPQYRIDSLDALLRT PVASSRGGAAQAGGPQLLGNLVQVSPAVQPQVVSHFNITPVVDVYAAVQGRDLGAVAK EVQKAVDDIRPKLPRGAQVTVRGQVKTMESSFIGLGVGLVMAIVLVYLLIVVNFQSWI DPLIIVTALPAALAGIAWMLFVTGTTLSVPSLTGAIMTMGVATANSILLISFARERLA EGIAPVQAALEAGATRLRPVLMTALAMIIGMVPMALGLGEGAEQNAPLGRAVIGGLLF ATVSTLFFVPVVFASVHNRLQRRAARRSHDLRGSEGHV" gene 389578..390891 /locus_tag="Rpic12D_3820" /db_xref="GeneID:8021507" CDS 389578..390891 /locus_tag="Rpic12D_3820" /inference="protein motif:TFAM:TIGR01730" /note="TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rso:RS02155 putative transport transmembrane protein" /codon_start=1 /transl_table=11 /product="efflux transporter, RND family, MFP subunit" /protein_id="YP_002983751.1" /db_xref="GI:241665392" /db_xref="InterPro:IPR006143" /db_xref="GeneID:8021507" /translation="MSEQTSGAHSGAHSGHLADGPPHHVVTVDPIEQVDRGPAMRRAR WVVMVVGVLLALGAARTLVGRYDNAHALERQVNAQTSRYVTTIAPKPAHTTRELTLPG TLQGYVESPIYARTSGYVLRWFKDIGAHVDKGEVLALLDTPEVDQELNQAQATRNQAA ARKALAQTSLTRWQNLRQKDAVSQQELDERTSAANQAQADLAAAEANVRRLQELQGFR RVVAPFAGVVTKRNVDVGALVNAGNAGANRELFTLAQTDPLRIYLYVPQAYSQQVKVG QDVAVTLAELPGQTFHGTIARASGAIDATTRTLQVEVQLPNKDGRLLPGAYVQVAIQG TAGGDAAGASAKADAPVAFTVPTNTLLFRKEGPRIAVAENGHVDLRPVTIGRDYGRTV EIISGLKATDALILNPADSIEQGEAVTIVTPAPASAPAASAPHAS" gene 390888..392342 /locus_tag="Rpic12D_3821" /db_xref="GeneID:8021508" CDS 390888..392342 /locus_tag="Rpic12D_3821" /inference="protein motif:TFAM:TIGR01845" /note="TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: rso:RS02156 putative outer membrane drug efflux lipoprotein" /codon_start=1 /transl_table=11 /product="RND efflux system, outer membrane lipoprotein, NodT family" /protein_id="YP_002983752.1" /db_xref="GI:241665393" /db_xref="InterPro:IPR003423" /db_xref="InterPro:IPR010131" /db_xref="GeneID:8021508" /translation="MICRPRLRTTALAASLIVSLAGCSLAPTYERPALDVPAHWQTEA PWRAAQPADAAPKGPWWQRFNDPQLDKLITQALAHNQSLKVALSNLEQAQAQTRVARA SLLPTITANNNDSRTRTSSERPLSSYTSPTMSTIQSDLVLRADASYEADLFGRVRNTV ANAAASEEQAGANFENFRLLLAAQVATTWYNLRETDAEIAVVQEGLALQRKALDFVTS RHQDGVASGLDLAQQQALVDSTATQAELLTKQRAQYEHALATLVGTPAPAFHIDPTPL KGTAPQIPVALPSDVIERRPDVAAAERGAAAANAQVGVARAAFFPSVMLNGGAGWESR DLALLFSAPTLLWSFGTQIAQTVFDAGRTRGRVDIANAAYQGAIANYRQTVLGALQEV EDGLAGLQSLDRAANQARHAVESARKVYDIASVRYEGGLATSLDVITAQQSLLNNQRT AVQILGQQMTTSVFLVKAVGGDWNQAAAAPTAAR" sig_peptide 390888..390965 /locus_tag="Rpic12D_3821" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.912) with cleavage site probability 0.339 at residue 26" gene complement(392346..393275) /locus_tag="Rpic12D_3822" /db_xref="GeneID:8021509" CDS complement(392346..393275) /locus_tag="Rpic12D_3822" /inference="similar to AA sequence:KEGG:RS02157" /note="KEGG: rso:RS02157 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983753.1" /db_xref="GI:241665394" /db_xref="GeneID:8021509" /translation="MQERWTAISLARARAHRLYGVRGWLVTLLWLNTLPALVVTLAMA MTVMVGGADAGRVKPMLVLAWLAFPLGLIALAFLRVRWFPLVWLGYCLCQLFATLAMR STIEGWTTLASGGAAGQVPTTLILTAQALLLIGTAAYVWHSRRARVTYRHEVRTTDPS AAPAVFDKPAPNETPSDATDHARERAALRRVAQELSSGVLDTRTWMHVMRHHADATDG TRTAAYVRARMSELCPPAHVHPPVVRTLSTGLCALLVSLLAAGVLMAAVIALALRVPG DGTDLLELLVAVALTLSWLGGLFVGAGFLRRVA" gene 393727..394083 /locus_tag="Rpic12D_3823" /db_xref="GeneID:8021510" CDS 393727..394083 /locus_tag="Rpic12D_3823" /inference="protein motif:PFAM:PF01042" /note="PFAM: Endoribonuclease L-PSP; KEGG: bph:Bphy_5466 endoribonuclease L-PSP" /codon_start=1 /transl_table=11 /product="Endoribonuclease L-PSP" /protein_id="YP_002983754.1" /db_xref="GI:241665395" /db_xref="InterPro:IPR006056" /db_xref="InterPro:IPR006175" /db_xref="GeneID:8021510" /translation="MTDIQRFHTNARMSQIVIANGIVHLAGQVPEIDFKSVTEQTNNI LERIDALLAEAGVDKTRLISANIWLTDAKHFAELNAAWEAWVPAGHAPTRACVQSGLM RPGIDVEIAVTALAKG" gene 394097..395347 /locus_tag="Rpic12D_3824" /db_xref="GeneID:8021511" CDS 394097..395347 /locus_tag="Rpic12D_3824" /inference="protein motif:PFAM:PF01266" /note="PFAM: FAD dependent oxidoreductase; KEGG: bxe:Bxe_B0799 D-amino-acid dehydrogenase" /codon_start=1 /transl_table=11 /product="FAD dependent oxidoreductase" /protein_id="YP_002983755.1" /db_xref="GI:241665396" /db_xref="InterPro:IPR006076" /db_xref="GeneID:8021511" /translation="MRFDTLVLGAGIVGVSVAVHLQKRGRAVALVDRRAPGFETSFGN AGLIQREGVYPYAFPRDLSTLLRYASNTSADVHYHPGDLPRLLPFLWQYWRNSHPARH AAIARAYAPLIAHSVSEHRALAEAAGATHLIRPSGWIKVFRNTATQDKETRNVERWQR EYGVAFEALDPARLHVAEPHLDTSLLGGLRYTEADSVSDPNALVTAYAKHFEQLGGRF FEADANTLTPNAPWLLQTKEGELRADNVVIAMGPWADVITSRLGYSLPLAVKRGYHMH YAPAPGAQLNHPVLDADGGYVLAPMARGIRLTTGAELAHRDAPKTPVQLNAVEPVARK LFPLAERVDAEPWMGARPCTPDMLPIIGPAPHHPSLWFAFGHAHHGLTLGPITGRLIA EMMTGETSTVDVRPFRAQRFWEDR" gene complement(395349..396827) /locus_tag="Rpic12D_3825" /db_xref="GeneID:8021512" CDS complement(395349..396827) /locus_tag="Rpic12D_3825" /inference="protein motif:PFAM:PF07364" /note="PFAM: Microcystin LR degradation protein MlrC-like; MlrC domain protein; KEGG: cti:RALTA_B1311 conserved hypothetical protein, DUF1485" /codon_start=1 /transl_table=11 /product="Microcystin LR degradation protein MlrC-like protein" /protein_id="YP_002983756.1" /db_xref="GI:241665397" /db_xref="InterPro:IPR010799" /db_xref="InterPro:IPR015995" /db_xref="GeneID:8021512" /translation="MRILIARFNHETNTFSPVPTPLASFHPHYGDDAYRAAKGTRTAA GAFIDLAEAAGAEIVVPVVAGANPSGRVAADAYTTLCDAIVAVAPGCDALLLDLHGAM VAENSDDGEGDLLERLRAVVPDVPIAVALDLHGNLTQKFIDLADIAVSFKTYPHVDMY ETGEHAGRLLFDKLAGRANPVLAWRRLPLVTHTLRSRTDEGAMHRAVALARQAEQDGM LAVSILAGFGLADIAAPCLSIVVVGNGDKHAADAAAQRIADAIWADREGFVYRSEPLT ESIARAARVADAPGSGPVLLLDHGDNCMSGGTCDDMHVLHEALKQGLSGIAVGPVCDP EAVAAMIEAGEGATVTLPIGDKVPLTQLGIYPVPRALTGKVVAISDGEYTITGPTYTG QRIRMGRTALLDIGAAQIVVTETPQEHWDLGIFTHIGVDPRAARFVLLKSRMYCRPVF VPIAKAVVECDGGGVTSSDYARFPFAKVRRPVFPLDAEAALG" gene complement(396848..398110) /locus_tag="Rpic12D_3826" /db_xref="GeneID:8021513" CDS complement(396848..398110) /locus_tag="Rpic12D_3826" /EC_number="3.5.1.87" /inference="protein motif:TFAM:TIGR01879" /note="KEGG: cti:RALTA_B1312 amidase, hydantoinase/carbamoylase, N-carbamoyl-L-amino-acid hydrolase; TIGRFAM: amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20" /codon_start=1 /transl_table=11 /product="amidase, hydantoinase/carbamoylase family" /protein_id="YP_002983757.1" /db_xref="GI:241665398" /db_xref="InterPro:IPR002933" /db_xref="InterPro:IPR010158" /db_xref="GeneID:8021513" /translation="MNSREMMTTETQLRINGARLWDTLMQQARIGATPKGGVRRLALT DLDRQGRDFFVAQAKAAGCTVRVDAIGNLFARRPGRNNALPPVMTGSHIDTQPTGGKF DGNYGVFAGIEVVRTLNDAGIETEAPIEVAVWTNEEGSRFVPVMMGSGAFIGEFALDA VLAAQDRDGVAVGEALRSIGYAGSEPVGGRTVGAYFEAHIEQGPVLEAHATTIGVVTG ALGQRWYDVVLTGMEAHAGPTPMELRRDALLPAAELVGIANRIALERPPHARATVGCL SVHPDSRNVIPGQVSMTIDFRAADDAMLFDMDAALHEAVAELRARSGIDIALRQVVYF PPQPFDATLVNAVRSGARKLGLSEMDVISGAGHDAVYLARVAPTAMIFVPCKDGISHN EIEDARPEHLEAGANVLLHAMLQAAGRV" gene complement(398107..398820) /locus_tag="Rpic12D_3827" /db_xref="GeneID:8021514" CDS complement(398107..398820) /locus_tag="Rpic12D_3827" /inference="protein motif:PFAM:PF00005" /note="PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cti:RALTA_B1313 high-affinity branched-chain amino acid transport protein (ABC superfamily, atp_bind)" /codon_start=1 /transl_table=11 /product="ABC transporter related" /protein_id="YP_002983758.1" /db_xref="GI:241665399" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR017871" /db_xref="GeneID:8021514" /translation="MTTTAILDVADLHGYYGKSHVLQGVALSVGEGELVTLLGRNGAG KSTTLKTIAGVVTPRGQVRFRGKDIAGQPAHRIAAQGLCLVPEHRGIFKLLTVEENLK LGARRDSPWQLADIYRIFPRLHERRRNGGANLSGGEQQMLAIGRALMNHPRLLMLDEP VEGLAPVIVEEIVAQLKVIKQAGVSILLVEQNLEVCTQLADRHVIIEQGRVVYTGSNE AFRADDAIKDRYLGVGLAA" gene complement(398817..399587) /locus_tag="Rpic12D_3828" /db_xref="GeneID:8021515" CDS complement(398817..399587) /locus_tag="Rpic12D_3828" /inference="protein motif:PFAM:PF00005" /note="PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cti:RALTA_B1314 high-affinity branched-chain amino acid transport protein (ABC superfamily, atp_bind)" /codon_start=1 /transl_table=11 /product="ABC transporter related" /protein_id="YP_002983759.1" /db_xref="GI:241665400" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR017871" /db_xref="GeneID:8021515" /translation="MTTTPILQATGIVKQYGKFTALGGVDLRVMHGTVHSVIGPNGAG KTTLFHMLTGTRMITSGTIVFDGHDVTREADFQRVQRGIARSFQVTSLFPSLSVRENL RLAALGTTPRRAMHGWRLPQGDLACSDTVDRVLDRLELPRLADTPAAALSHGQQRRLE VGMALAANPRAIFLDEPTSGMGVDDLPAMKTLIRGLAQDHTVVLIEHNMDIVMDISDT ITVMQQGKVLMEGTPDAVRADPRVRAAYLGNMITGGKK" gene complement(399584..400552) /locus_tag="Rpic12D_3829" /db_xref="GeneID:8021516" CDS complement(399584..400552) /locus_tag="Rpic12D_3829" /inference="protein motif:PFAM:PF02653" /note="PFAM: inner-membrane translocator; KEGG: cti:RALTA_B1315 branched-chain amino acid inner-membrane translocator" /codon_start=1 /transl_table=11 /product="inner-membrane translocator" /protein_id="YP_002983760.1" /db_xref="GI:241665401" /db_xref="InterPro:IPR001851" /db_xref="GeneID:8021516" /translation="MQAAFQGLSRHRFWWLALGVTLLLPLVLTSGTLATEVLVYAMAV MACNLLLGYTGLLSFGQGIFFGLGSYAVGIGLTQLALPMPVALVLAVVVGAIVAAVVG WFAIRQRGTYFVMLTLAFSQMFYFLAYTTPSLTGGDNGLLDIPRPAFAASPWAFYAFV AVLFLVVFFLVQRVTESVFGRTLLAIRDNEERALAVGYNVRAFKLLAFVISGAVTGLA GALHAMLTGIAPLANIDYHVSEMILVMTVIGGTGNVFASVLGAAFYVLLSDWLSSLWP RWLMLLGFLLIAVSLFMQRGLFGLGQRLWQRVRAPRHAPAVQEERA" sig_peptide complement(399584..399688) /locus_tag="Rpic12D_3829" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.966) with cleavage site probability 0.908 at residue 35" gene complement(400552..401409) /locus_tag="Rpic12D_3830" /db_xref="GeneID:8021517" CDS complement(400552..401409) /locus_tag="Rpic12D_3830" /inference="protein motif:PFAM:PF02653" /note="PFAM: inner-membrane translocator; KEGG: cti:RALTA_B1316 branched-chain amino acid inner-membrane translocator" /codon_start=1 /transl_table=11 /product="inner-membrane translocator" /protein_id="YP_002983761.1" /db_xref="GI:241665402" /db_xref="InterPro:IPR001851" /db_xref="GeneID:8021517" /translation="MNVYLLQVVNGVGIGMLYFLLAVGLSIIFGLLRFVNFAHGAFYA LGAYLCFQALQMGMNFWLALVLAPIVIGALAWVTEKVLLRHVYAQAHEFHIVVTVGLA LVVQELIIVAWGPLGVDVPAPDALQGVVMWGDFVYPKYRLFVIGFTAVLALGLWWLLE GTRLGSAVRAGSESTEMVSLLGINVFRLFSLMFALGAATAAVAGVLAAPIRGAEPFMG VEALGVAFVVVVVGGMGSFAGALVGGLLVGIVQSLMSTLWPEGARLMIYVAMAAVLLL RPHGLLGRG" gene complement(401471..402670) /locus_tag="Rpic12D_3831" /db_xref="GeneID:8021518" CDS complement(401471..402670) /locus_tag="Rpic12D_3831" /inference="protein motif:PFAM:PF01094" /note="PFAM: Extracellular ligand-binding receptor; KEGG: cti:RALTA_B1317 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein" /codon_start=1 /transl_table=11 /product="Extracellular ligand-binding receptor" /protein_id="YP_002983762.1" /db_xref="GI:241665403" /db_xref="InterPro:IPR001828" /db_xref="InterPro:IPR006311" /db_xref="GeneID:8021518" /translation="MNRRDLLKLAALSAVPASLLQARSAWAADAIELGCPVPMSGPFA ANGKFADLGMKLAVEQYGKVLGRPLAYSVLDTEGKPATAVRKVQELAQQKNARYFAGG ILSSESLAMGKEAEKFGGVFITTAGADEITGKDCNRATFRWSVPTYGAIERTVRPLIE SMPKAKRWYTITPQYVFGDGLLSAAKNIFKEKGIEHVGNSYHALTEKEFSGYLTNAMA AKPDVLLILNFGSQSSDTLRQAVSFGMKKNTTILVAWASGLEQFESLGADLCDGVYFG AQYWHDVDTPANHDLVKRTQAAFKSNPNYSLAGSYTCTKILLDAMVKAGSVDPKAVIA ALQGMKYDGLTGPEEIRAADHQVLKNYYLLKGKPKNRMKDKDDFAEVVSVGKAFLPVE QTQCKLT" sig_peptide complement(401471..401554) /locus_tag="Rpic12D_3831" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 1.000 at residue 28" gene complement(402739..402834) /locus_tag="Rpic12D_3832" /db_xref="GeneID:8021519" CDS complement(402739..402834) /locus_tag="Rpic12D_3832" /inference="ab initio prediction:Prodigal:1.4" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983763.1" /db_xref="GI:241665404" /db_xref="GeneID:8021519" /translation="MMISPIYHNKYKKLVWFLLDVMVGENLAGQG" gene 403026..403865 /locus_tag="Rpic12D_3833" /db_xref="GeneID:8021520" CDS 403026..403865 /locus_tag="Rpic12D_3833" /inference="protein motif:PFAM:PF07729" /note="PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: cti:RALTA_B1318 regulatory protein, GntR" /codon_start=1 /transl_table=11 /product="GntR domain protein" /protein_id="YP_002983764.1" /db_xref="GI:241665405" /db_xref="InterPro:IPR000524" /db_xref="InterPro:IPR011711" /db_xref="GeneID:8021520" /translation="MATLGAGKTASIGIRKQKRADLVAEELKRLITQRNLKPGDKLPQ EIKLQETFGVSKGTIREALKSLEVQGLVSVSTGPAGGGTIVEVPLDRTFQLMQNYLFF KDIGIADVYTVRRLLEPELAAGAVPHLTEDDFRALEHTIDLCDPASAKAAAPLDQRQE DLSFHDILAAANPNPMLRFCCELINEMIRQLVVFGNETSPKDHAKFGASNVKFHRQIL DAARARDAETVRELMSTHMEDCTHHVTRMKGRVHGRLVLDSEMPRRHRPVLDEHDDGG HED" gene complement(403870..404313) /locus_tag="Rpic12D_3834" /db_xref="GeneID:8021521" CDS complement(403870..404313) /locus_tag="Rpic12D_3834" /EC_number="4.2.1.104" /inference="protein motif:TFAM:TIGR00673" /note="KEGG: dar:Daro_1442 cyanate hydratase; TIGRFAM: cyanate lyase; PFAM: Cyanate lyase domain protein" /codon_start=1 /transl_table=11 /product="cyanate lyase" /protein_id="YP_002983765.1" /db_xref="GI:241665406" /db_xref="InterPro:IPR003712" /db_xref="InterPro:IPR008076" /db_xref="GeneID:8021521" /translation="MQREEVTELIVLQKIRKQLSWAQLAEVIGQSKEWSTAAMLGQMT LTRAQAEAVGTALELPQEAIALLQVPPYKGSLPTAVPTDPLIYRFYELVSVYGTTFKA LIHEEFGDGIMSAIDFNMDLTREPDPKGDRVRIVMSGKFLPYKTY" gene 404614..405984 /locus_tag="Rpic12D_3835" /db_xref="GeneID:8021522" CDS 404614..405984 /locus_tag="Rpic12D_3835" /inference="protein motif:PFAM:PF04966" /note="PFAM: Carbohydrate-selective porin OprB; KEGG: rso:RSp1632 putative porin B precursor outer (glucose porin) transmembrane protein" /codon_start=1 /transl_table=11 /product="Carbohydrate-selective porin OprB" /protein_id="YP_002983766.1" /db_xref="GI:241665407" /db_xref="InterPro:IPR007049" /db_xref="GeneID:8021522" /translation="MELEPRFDTVSKPARQPAARRQSRGKRFGASAIAAAVLALGAAS AHAYDVTTSPYLLGDWGGLRTRLAEQGVTFNLGYGSEVAHNFSGGTEHLTRYTDQWVM GAALDLQKLWGWKGGTFQATVTDRNGRNLGSDANIGNNMLIQEVYGRGQTWHLTQFWL NQKLLDDRLEIKAGRVTVGEDFFSFSCDFQNLTFCGSQPGNLVGNYWVNWPTSQWGAR AKLHTSAETYAQVGVYQVNPNYVDDEWARHNGWKLNNPGGTTGALIPLEFGWMPNIEG RPGTYRVGVWYNTSNGKDLYEDVNGNPRGITGLDARQHSGQYGVYLNLQQQVTGTAGG RGATVFLNFSQADRDTAQTDHQLSVGVQYKGPFDRLSDTIGFAVGATHNNGRFADFVR QTNARTGANTVVGDGYEYVSELYYSYSPVPSVYFRPNLQYILHPGGTTQNKNAFVIGL KTGITF" sig_peptide 404614..404757 /locus_tag="Rpic12D_3835" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.997 at residue 48" gene 406016..407023 /locus_tag="Rpic12D_3836" /db_xref="GeneID:8021523" CDS 406016..407023 /locus_tag="Rpic12D_3836" /EC_number="3.6.3.17" /inference="protein motif:TFAM:TIGR02634" /note="TIGRFAM: D-xylose ABC transporter, periplasmic substrate-binding protein; KEGG: rso:RSp1633 D-xylose-binding periplasmic ABC transporter protein" /codon_start=1 /transl_table=11 /product="D-xylose ABC transporter, periplasmic substrate-binding protein" /protein_id="YP_002983767.1" /db_xref="GI:241665408" /db_xref="InterPro:IPR013456" /db_xref="GeneID:8021523" /translation="MISRVLNTLAAAAVLTFAATSAHASKQAPVIGFSIDDLRVERWT HDRDYFVESAKKLGATVNVQSANANEAKQIAQIENLIAQNVDVLVIVPFNSKVLGNAI ASAKKKGIKVVSYDRLILNADIDGYVSFDNEKVGEMQAQGVVKLAPKGNYFLLGGAST DNNARILRDGQMKVLKPLVDKGDIKIVGQQWTPEWDPSKAQSIVENALTANNNNIQGI VASNDGTAGGAIQALAGQKLAGKVPVSGQDADLAGVRRVAEGTQAMTVYKPIKVIAST AAEMAVDLVKGTQPKFNTKINNGKKDVDTILLTPTLLTKDNLDTVIKDGFYTHQQIFG K" sig_peptide 406016..406090 /locus_tag="Rpic12D_3836" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.991 at residue 25" gene 407054..408601 /locus_tag="Rpic12D_3837" /db_xref="GeneID:8021524" CDS 407054..408601 /locus_tag="Rpic12D_3837" /inference="protein motif:TFAM:TIGR02633" /note="KEGG: rso:RSp1634 xylose transporter ATP-binding subunit; TIGRFAM: D-xylose ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase" /codon_start=1 /transl_table=11 /product="D-xylose ABC transporter, ATPase subunit" /protein_id="YP_002983768.1" /db_xref="GI:241665409" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR013455" /db_xref="GeneID:8021524" /translation="MSSNGTLFEMRNIVKSFSGVRALDGVSLAVKPGECVGLCGENGA GKSTLMKVLSGVYPYGTFEGDILWEGEPLRAHSVRDSERAGIVIIHQELMLVQQLSVT ENIFLGNEITKPGGRMDYDAMHAKAEELLARLRLTDVNVAAPVMNYGSGHQQLFEIAK ALAKNARLLILDEPTSSLSAKEIEVLLSIIEDLKRSGVACVYISHKLDEVKRVCDTIT VIRDGKHIGTRPAADMTIDNIITMMVGREMTSLFPKVEHTVGEVVMEARNVTCWDVTN PNRKRADDVSFAVRRGEILGIAGLVGAGRTEMVSALFGAYPGRSTAEIKVEGKPVKVS SPAQAIANGICLVPEDRKRHGIVPLMGVGENITLATLAQYARGMRVDKGAELTTVDRE IKRLRIKTASPALSIASLSGGNQQKAVVTKMVLAMPKVLILDEPTRGVDVGSKYDIYK MIADLAASGVAIIMVSSEMPEILGMSDRVLVMGEGQLRGDFVNQGLTQERILAAAINA DPQLRAA" gene 408608..409816 /locus_tag="Rpic12D_3838" /db_xref="GeneID:8021525" CDS 408608..409816 /locus_tag="Rpic12D_3838" /EC_number="3.6.3.17" /inference="protein motif:PRIAM:3.6.3.17" /note="PFAM: inner-membrane translocator; KEGG: rso:RSp1635 xylose transmembrane ABC transporter protein" /codon_start=1 /transl_table=11 /product="Monosaccharide-transporting ATPase" /protein_id="YP_002983769.1" /db_xref="GI:241665410" /db_xref="InterPro:IPR001851" /db_xref="GeneID:8021525" /translation="MSNILQSQLVRQSGNNGSGGPRLDSRAIQQLFVRYKVLALLMAV ALIWIFFYFQTHGTFLKPNSISNLFLQMSVTGMLACGMVFVIIAGEIDLSVGSLLGLL GGLVAILTVNLGWNTWLAVGTVLVAGAAIGVVNGYITTKLRVPSFIVGLGGMLAFRGL LQWSTDSVTIAPVPDDLVNIAQSFVPAWLAWSLAAFIVAMSVVLTVSRRRERARLQLA LTPIWADGLKLLAIAAASLGFVAVLNDANGVPLPVLILLVLLAVFSYIATQTVFGRHV YAVGGNMEATRLSGVNVGRVKLLVFVLMGLMCAFAGIITTARSAAGSPSAGVGGELDA ISACFIGGTSMRGGSGTVYGALIGALVMASLDNGMQQMNVDASWQMIVKGVVLVLAVW IDVLSGSNRG" gene 409952..410869 /locus_tag="Rpic12D_3839" /db_xref="GeneID:8021526" CDS 409952..410869 /locus_tag="Rpic12D_3839" /inference="protein motif:PFAM:PF01370" /note="PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; short-chain dehydrogenase/reductase SDR; KEGG: rso:RS02194 putative oxidoreductase protein" /codon_start=1 /transl_table=11 /product="NAD-dependent epimerase/dehydratase" /protein_id="YP_002983770.1" /db_xref="GI:241665411" /db_xref="InterPro:IPR001509" /db_xref="InterPro:IPR002198" /db_xref="InterPro:IPR013120" /db_xref="GeneID:8021526" /translation="MADYQTPARVLVTGVAGNLGRKVVEALASTSWCASIIGVDWVPQ NVAFSPQAEARFQWVVADLTQANGAWTELLDSVDAVIHLAAIHSTPDATWEQALASYG MTLNVLEAAATRGVRRFVFASSNHAMGAYKDQPLAGTIGPGKLVAELDPAPGTRWHNG IEEVHSLAYGTSKAMGERLCQAVAQVSNGRLSIVSLRIGWALPDENDPNDINHSGTAD TPVPGELPDEASHIALRWFRNMWLSNEDLRRLFLSAITADPASWPAPAIVVNGVSNNT GMDWGLETGRRLIGYDPQDDLYALLKSRG" gene complement(410927..412165) /locus_tag="Rpic12D_3840" /db_xref="GeneID:8021527" CDS complement(410927..412165) /locus_tag="Rpic12D_3840" /inference="similar to AA sequence:KEGG:Rmet_2737" /note="KEGG: rme:Rmet_2737 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983771.1" /db_xref="GI:241665412" /db_xref="GeneID:8021527" /translation="MRNDSPVMHEEEILSDFDLKGLLLRCWELRRKVAVFAVFFSVAC FALFFWAGRQYSSEGFMRAPRKFAEYNAQKAAFWDRETLRRYLDQNKKLDDPNGRYLL GALSERFIQKHLQAVLPLSKDDLRYITDAKGVLESVGILGFSITFKSQSADDAQARVQ MMGDYIKDTMLSEDLMDTIYTKESETKAKKQQIDNQIIQKRLALTQAAARLEAARSIA GKYPEASKMEARQLLSTGNDKDSSRYLSPVVQLVGTETEIADLKSQLTLLERDAAQNA LRNDFYERIEQRSRQVMTGGALLTEFTKIGEDVFKGKNLQDDQTREVYNQIMLVGEQM RTKHVTEARFVSGPTLPEYRSGPSGLVLSVLSLILGVSLACVLALLLDKVVDVRASTK GNTFKEELGAEDNVRPVRAA" gene complement(412601..413641) /locus_tag="Rpic12D_3841" /db_xref="GeneID:8021528" CDS complement(412601..413641) /locus_tag="Rpic12D_3841" /inference="protein motif:PFAM:PF00356" /note="PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: rso:RS02195 transcription regulator transcription regulator protein" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LacI family" /protein_id="YP_002983772.1" /db_xref="GI:241665413" /db_xref="InterPro:IPR000843" /db_xref="InterPro:IPR001761" /db_xref="GeneID:8021528" /translation="MKRGAAAVTVDDVAAHAGVSIKTVSRVLNHEPNISEKTRAKVVE AMQALDYRPNPAARRLASKRADIIALVYDNPSDNYIVNIQHGALEACQALDYSLLLTP CHYRDPHLAEQIIQSARQRALAGIILTPPVSDVPSLIHALDEAGIDYVRLAPADREHK GLSVNTEDRAAARDMTLHLIGLGHRRIGFVVCDPDHGAAYQRVFGYRDAMAQAGIDVD EHLVEQGEHSFESGVACAERLLSREPRPTAIFAGNDDMAAGVLRVAQARGIKVPEELS ICGYDDTPLSRQLWPALTTVRQPIQAMAHAAVEQLVAIHRPHLPGLKPHSVHENLQYE LVIRDSTCQPAR" gene complement(413744..414637) /locus_tag="Rpic12D_3842" /db_xref="GeneID:8021529" CDS complement(413744..414637) /locus_tag="Rpic12D_3842" /inference="protein motif:PFAM:PF00892" /note="PFAM: protein of unknown function DUF6 transmembrane; KEGG: rso:RS02196 hypothetical protein" /codon_start=1 /transl_table=11 /product="protein of unknown function DUF6 transmembrane" /protein_id="YP_002983773.1" /db_xref="GI:241665414" /db_xref="InterPro:IPR000620" /db_xref="GeneID:8021529" /translation="MPVLYPLLAVVIWAANTIVSKAAAGVVDPAAISLYRWVLAAIVL TPFCARPLWRERLAVLAQWRRFGVLALLGMVLYQCLAYYAAHSTSATNMGVIGALIPM LGLILNGVVFRQPVGVQAVAGVVVSLLGVLYLLGRGHPANLFEGGVNHGDVLVLIGAT AYALYNILYRRWALPFGQWLNLYVQVLVAVVMLVPLALTAHSLSIPAKGVGLVVFAGI ASSIVASYLWMQGLKRIGSERTAVLMNLMPVFTAGLAALMLGETVHGYHWVGGGLVLL GVSLAQGIVRVPIGRSGLRAR" sig_peptide complement(413744..413818) /locus_tag="Rpic12D_3842" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.608) with cleavage site probability 0.466 at residue 25" gene 414745..415542 /locus_tag="Rpic12D_3843" /db_xref="GeneID:8021530" CDS 414745..415542 /locus_tag="Rpic12D_3843" /inference="protein motif:PFAM:PF00165" /note="PFAM: helix-turn-helix- domain containing protein AraC type; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rso:RS02197 transcriptional regulator transcription regulator protein" /codon_start=1 /transl_table=11 /product="transcriptional regulator, AraC family" /protein_id="YP_002983774.1" /db_xref="GI:241665415" /db_xref="InterPro:IPR000005" /db_xref="InterPro:IPR013096" /db_xref="GeneID:8021530" /translation="MYTAYREADLRVPTGAPFYFRYDHFQPETDIEPHTHPWGQLNRI ALGLMEVVVETRRLTAPAEYLIWVPANQPHSASIRQATDFLSVYVAEPLARRLPPMAC LIQQTPLVRALLEDFQARRISVMADDWDLRQFELLVEMLGRAGHTDSYLPDSKDRQLE PILQAIRLFPADNTPLKTWAERVHSTERTLARRFQHELGMSFVQWRNRVRLLRALVWL KEDCSIQDIALALGYGTPSAFIAMFRKQIGFSPQRYRRQMCGEVARA" gene 415885..416379 /locus_tag="Rpic12D_3844" /db_xref="GeneID:8021531" CDS 415885..416379 /locus_tag="Rpic12D_3844" /inference="similar to AA sequence:KEGG:Rmet_5762" /note="KEGG: rme:Rmet_5762 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983775.1" /db_xref="GI:241665416" /db_xref="GeneID:8021531" /translation="MLGWVLVLSVPVFSGCSSLMSEGTTAAAGVGGAALAAKVTNNAA VATGIGLGVQAGARAALQHSQRVVHTETQDQIAEVAGTLHDNVVGTWQIKHGMPLEPD ERGRVVVTRSINGPLVNCKEILFTVDGDAARVDFFIATICHDGTRWKWATAEPATARW GSLQ" sig_peptide 415885..415950 /locus_tag="Rpic12D_3844" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.951) with cleavage site probability 0.555 at residue 22" gene 416376..416864 /locus_tag="Rpic12D_3845" /db_xref="GeneID:8021532" CDS 416376..416864 /locus_tag="Rpic12D_3845" /inference="similar to AA sequence:KEGG:Rmet_5763" /note="KEGG: rme:Rmet_5763 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983776.1" /db_xref="GI:241665417" /db_xref="GeneID:8021532" /translation="MSGTWRLLAFCASLCAGCSSVGPLTGAAAGVATGTVTANPAVAY GVAVSVNAATDASIKYVTRQWAASEQDALATAVGRLNDSTPSLRWSLERLMGITKAHG TIVLVRTLTTPLATCREAIFTVQETTSKAAPGYTIYACLNGGAWQWANAEPAVPRWGN LQ" sig_peptide 416376..416462 /locus_tag="Rpic12D_3845" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.389 at residue 29" gene 416977..417393 /locus_tag="Rpic12D_3846" /db_xref="GeneID:8021533" CDS 416977..417393 /locus_tag="Rpic12D_3846" /inference="protein motif:PFAM:PF01047" /note="PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: rso:RS02203 transcription regulator transcription regulator protein" /codon_start=1 /transl_table=11 /product="transcriptional regulator, MarR family" /protein_id="YP_002983777.1" /db_xref="GI:241665418" /db_xref="InterPro:IPR000835" /db_xref="GeneID:8021533" /translation="MFDHCLYFNTTALARKLDRVWAEAFAPFDLTPPQGFMLRAIVER PGMLQSELSEAMSVTRPTATRALDGLEAKGLIERRKTEADGRETAIFPTPAAEKIGAA LNQASGAVTARLKRVLGSTEFADTVTKIRGVRSTLT" gene 417444..417836 /locus_tag="Rpic12D_3847" /db_xref="GeneID:8021534" CDS 417444..417836 /locus_tag="Rpic12D_3847" /inference="protein motif:PFAM:PF01361" /note="PFAM: 4-oxalocrotonate tautomerase; KEGG: rso:RS02204 hypothetical protein" /codon_start=1 /transl_table=11 /product="4-oxalocrotonate tautomerase" /protein_id="YP_002983778.1" /db_xref="GI:241665419" /db_xref="InterPro:IPR004370" /db_xref="GeneID:8021534" /translation="MPILNVKVSAQRSAQMTQKIAATLLELTSRILGKDPKVTAIAID YVDPADWIVGGQTLAAQGKNSVYFDIKVTDETNTKAEKAQYIAEAFEAFAELLGNLHE ESYIYVQDVRAAAYGYGGKTQEYRYQHA" gene 417836..418015 /locus_tag="Rpic12D_3848" /db_xref="GeneID:8021535" CDS 417836..418015 /locus_tag="Rpic12D_3848" /inference="ab initio prediction:Prodigal:1.4" /note="KEGG: rso:RS02205 putative transmembrane protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983779.1" /db_xref="GI:241665420" /db_xref="GeneID:8021535" /translation="MCRLRRPAPRQTGVIMNRMSAFFAASWLAAALLYFGQHSLPVTA VAGVVLLAGFDLFRP" sig_peptide 417836..417970 /locus_tag="Rpic12D_3848" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.977) with cleavage site probability 0.758 at residue 45" gene complement(418032..419051) /locus_tag="Rpic12D_3849" /db_xref="GeneID:8021536" CDS complement(418032..419051) /locus_tag="Rpic12D_3849" /inference="protein motif:PFAM:PF00165" /note="PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bte:BTH_I0059 AraC family transcription regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, AraC family" /protein_id="YP_002983780.1" /db_xref="GI:241665421" /db_xref="InterPro:IPR000005" /db_xref="GeneID:8021536" /translation="MKRQPKAASKRADPSRRARIAILLPPRLFAGYVFLTQEMLLIAG TMRARSVDVMGSRLFDIDLLSVDGADVASFGERPVAATAALDNTAYDVVIVPAQFAPQ VALDDDEMRLAAWLRARYDAGALVVGLNAAPLFAKAGLLDRRRATGLASERAWFARHF PDVQYTPDQPLVVDGRLITVSGINPAVDACAYVIDHCRGAGASRGMLRTALTQSLPSY EHMAVWTAQFKRHGDAAVLAIQEIVERELAAPPALAELAVRAAMSERTLTRRFAAATG SNLRRYVAALRLELAAFLLRTGMQPLDHIADECGFGSVSALSRAFATGHGASPLRYRA QHRTR" gene 419137..420279 /locus_tag="Rpic12D_3850" /db_xref="GeneID:8021537" CDS 419137..420279 /locus_tag="Rpic12D_3850" /inference="protein motif:PFAM:PF00441" /note="PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bpl:BURPS1106A_0069 acyl-CoA dehydrogenase" /codon_start=1 /transl_table=11 /product="acyl-CoA dehydrogenase domain protein" /protein_id="YP_002983781.1" /db_xref="GI:241665422" /db_xref="InterPro:IPR006089" /db_xref="InterPro:IPR006090" /db_xref="InterPro:IPR006091" /db_xref="InterPro:IPR006092" /db_xref="InterPro:IPR013107" /db_xref="GeneID:8021537" /translation="MIARTLFDAEHDTFRESVRRFIDAEVLPHHERWEDQGYVDRAIW EKAAAAGYHCASMPEAYGGAGADIRYSTVLMEEIARAGATGLGFGLHSEIVAPYLLHY GSEALKQSYLPKLASAEMIGAIAMTEPGAGSDLQGVRTTATRSSDGSHYVLNGSKIFI TNGWHADVVIVVARTTPEGGAKGTSLFVVDTSMEGFSKGKRLKKVGMKAQDTAELFFD NVRVPAANLLGEEHRGFAYLMQELPWERLQIAIGAIASAEGALEWTLRYVRERQAFGK SILDFQTARHALAELKTEVQIGRVFVDQCIALKLAGKLDAATASMAKYWTTDLQFKVM DRCVQLHGGYGYMWEYPIARAWADSRVQQIYGGTNEIMKELIARTL" gene 420307..421512 /locus_tag="Rpic12D_3851" /db_xref="GeneID:8021538" CDS 420307..421512 /locus_tag="Rpic12D_3851" /EC_number="2.3.1.16" /inference="protein motif:TFAM:TIGR01930" /note="KEGG: bte:BTH_I0061 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase" /codon_start=1 /transl_table=11 /product="acetyl-CoA acetyltransferase" /protein_id="YP_002983782.1" /db_xref="GI:241665423" /db_xref="InterPro:IPR002155" /db_xref="GeneID:8021538" /translation="MEAYIYDAVRTPRGKGKKDGSLHGVTPLRLAATALRAIRDRNQL DTALVDDVVLGCVEPVGEQGACIGRVAVLSAGYAETTAGVQINRFCASGLEACNMAAA QVMAGQSDFAIGGGVESMSRVPMGASGGAWPVDPAAAIPLYFVPQGVSADTIATKWGY SRHDVDAYAAESHRRAHAASTAGWFTGSIVPVRDQNGLTILDRDEMIRPQTTVDTLAQ LKPSFAELGEQYGFDAVIRQRYPELERIEHVHHAGNSSGIVDGAAAVLIGSREAGKRA GLKPRARIRSFASIGSEPSIMLTGPSYAAEKALKRAGMSASDIDLYELNEAFASVVLR FMEVLAVPHDRINVNGGAIAMGHPLGATGAMILGTLLDELERRGASTGLATLCVGAGM GTATIIERV" gene 421526..423652 /locus_tag="Rpic12D_3852" /db_xref="GeneID:8021539" CDS 421526..423652 /locus_tag="Rpic12D_3852" /inference="protein motif:PFAM:PF02737" /note="PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: bte:BTH_I0062 fatty oxidation complex, alpha subunit" /codon_start=1 /transl_table=11 /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding" /protein_id="YP_002983783.1" /db_xref="GI:241665424" /db_xref="InterPro:IPR001753" /db_xref="InterPro:IPR006108" /db_xref="InterPro:IPR006176" /db_xref="GeneID:8021539" /translation="MIDITIDTDGIATLTWNQPGRAQNVLNGDTCAAFFAAIDRVCAD ASVKGILVTSAKADFIAGGDLEWLQASDDAATLFDRTCELHRMLRKLETCGKPVAAAL PGSTLGGGLEIALACHYRVAADNARARFGLPEVTLGLLPGGGGTQRLPRLIGVQKALP MLLEGKRIKAADALKLGIVDAVVNAGEEADAARTWLLGDGQTRAQQPWDIKGYKVPGG GIASPAVQQLFTAANAMLRQKTYGNYPAAASILSCVYEGLITDLDTGLKTEARYFVQA VLSPEARAMIRTLFFSLNAANKLAARPADVPVRRYAKVGVLGAGMMGAGIAYVTAKAG VPVVLLDTTQEAAERGKDYSRKLVEKQVQRGRLHAEQAEALLARIKPTTSYADLDGAG LIVEAVFEQREIKADVTRMAEAVISPDAIFASNTSTLPITGLAEASQRPGNFIGLHFF SPVDKMPLVEVIVARQTTRATLAQALDYVKAIGMTPIVVNDSRGFYTSRVFSTYVLEG LAMLAEGVAPALIENAGLQAGMPVGPLALIDEVSSELIHKVNQQTRADLGVAYIERPG EAVAERMVALGRIGRKAGQGFYDYPEGGRKALWPGLAAEYPPAATQPDVQTLVDRLIT VQAVETARCLDEGVVTDPRDADVGALLGWGFPAFRGGPVSHIQRVGVDAFVEQCDRLA ADHGRRFAPPKLLRDMAEQHAVFYTR" gene 423932..426640 /locus_tag="Rpic12D_3853" /db_xref="GeneID:8021540" CDS 423932..426640 /locus_tag="Rpic12D_3853" /inference="protein motif:TFAM:TIGR00254" /note="KEGG: reh:H16_A0025 predicted signal transduction protein containing PAS, GGDEF and EAL domains; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein" /codon_start=1 /transl_table=11 /product="diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)" /protein_id="YP_002983784.1" /db_xref="GI:241665425" /db_xref="InterPro:IPR000014" /db_xref="InterPro:IPR000160" /db_xref="InterPro:IPR000700" /db_xref="InterPro:IPR001633" /db_xref="InterPro:IPR013767" /db_xref="GeneID:8021540" /translation="MPPARQTPPGHDNIEMGMGMALEQPDTSGRTIRRRLRAWLSPLN VGVAVCLAAIWWFTFDQLAQARDRLIHNAEIRTRLEAQAFGQYSLGSTRRLSEFLLDL RASWLAGRDVFERVIHEREEAVRDLTSQVAVIDANGLLLYSSIGPVSQPVDLSEREHF RVHKASGGRDVLFISDPVQGKVSKKWSIQFTRPILKDGQFAGVMVVSVSPEQFASFAN TLTVGTNGVASIIKESGQVIARMPDPTAGIDSPPRKRRFNEPGAQESGNYRTVSGTDG VERLLGYHHVPEIGLYFLVGESIASILAPYEAYRRTALAGAIGSTLLMALLYATLRRS MSQRKQHIDEMRLASLVYASSSEAMMVTTLDGTVIDVNPAFTVTTGYTAQEFKGQHSD AIRSECNDSAVVDTMRTAVTTKGTWSGEYLIRRKDGTEFPALLTVDTFAGHKLGAPSR VALIHDITEKKRAEEVIWRQANFDTLTELPNRHMFYAKLRQEILHARQAATAVALLFI DLDRFKEVNDTLGHDQGDVLLKEIARRISAIVRGTDTVARLGGDEFTIILPNLPDAGA AAPIIRSLLARIATPVQLGEESVEVTASIGLALYPRDADNAESLLVRADQAMFAAKSA GRNQWSVFTPALQRAEQERLRITSDLRIAIEQKQLAVHYQPIVDLRSGAINKAEALIR WTHPVRGEIEPADFIPVAEETGLIVQIGKWVLNEALTEVTRWHTVLGRHMQVSVNKSP VEFRAAGQLGDSWADVVKRRAIRPGSLVIEITEGALMEGSAEVVDHLTRLRQAGIEIA LDDFGTGYSSLSYLKRFDIDYIKIDQSFVRSLAHDPKDIALCSAIVSMAHALRIKVIA EGIETEEQKAILVAAGCDYGQGHLFCPPVPPAAFEAFVAKSQLAET" gene complement(426647..426880) /locus_tag="Rpic12D_3854" /pseudo /db_xref="GeneID:8021541" gene 426883..427188 /locus_tag="Rpic12D_3855" /pseudo /db_xref="GeneID:8021542" gene 427376..427852 /locus_tag="Rpic12D_3856" /db_xref="GeneID:8021543" CDS 427376..427852 /locus_tag="Rpic12D_3856" /inference="protein motif:PFAM:PF03713" /note="PFAM: protein of unknown function DUF305; KEGG: rme:Rmet_5398 protein of unknown function DUF305" /codon_start=1 /transl_table=11 /product="protein of unknown function DUF305" /protein_id="YP_002983785.1" /db_xref="GI:241665426" /db_xref="InterPro:IPR005183" /db_xref="GeneID:8021543" /translation="MSLRSVPLPRTLLLAVLALMSSIGAHAALAQEAPPQANREQAFL AENDVAMGKMMDGMAPRPSGNIDQDFVAMMTPHHQGAIDMAVAYLRYGQNEQLRRIAQ EIVVSQQQEIAAMRLALGQPLPPSAPAPTQLGAASTTTAPASHAAHHAHTTRQQED" sig_peptide 427376..427468 /locus_tag="Rpic12D_3856" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.929 at residue 31" gene 427852..429327 /locus_tag="Rpic12D_3857" /db_xref="GeneID:8021544" CDS 427852..429327 /locus_tag="Rpic12D_3857" /inference="protein motif:TFAM:TIGR02276" /note="TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: bph:Bphy_6260 YVTN beta-propeller repeat-containing protein" /codon_start=1 /transl_table=11 /product="40-residue YVTN family beta-propeller repeat protein" /protein_id="YP_002983786.1" /db_xref="GI:241665427" /db_xref="InterPro:IPR011964" /db_xref="GeneID:8021544" /translation="MKNRLFVATTLAAAAITCAASASAGQAPASLASPDIPISHRDRV YAAEQFSNTVSVTDPASNTLLGVIKLGDPAPGNFSPLYRGQVLVHGMGFSPDHRTLAV VSIGSNSVTFIDTQTNAVKHTTYVGRSPHEAFYTPDGSEVWVTVRGENYIAVLDASTY AEKTRITVPAGPGMQIFSPDGKYGYVCSSFNPETVVISTADHKIVGHIKQESPFCPNI AATPDGKQVWLTLKDIGKVQVFSAEPPFNPITSFDTGPITNHVNFAHHTKGTFAYVTI GGTNQVKVFRTDNFEQVATIPVGKLPHGLWPSGDGTRIYVGLENDDALAVIDTLTNKV VSTVRIGQAPQALTYVPNAVPKGDGTTNLQPLGMAGQVSHLALVPAGADKADAMAVPT SVALFDQGLVQVLQASVTGLQPKQPYALALSQHADGSGPLERLASFMSNPAGGAIVNS IGQIRQVVTPANADADNTRRYLVIAPVVSGKLGSAVQVQAR" sig_peptide 427852..427926 /locus_tag="Rpic12D_3857" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.850 at residue 25" gene 429420..430049 /locus_tag="Rpic12D_3858" /db_xref="GeneID:8021545" CDS 429420..430049 /locus_tag="Rpic12D_3858" /inference="protein motif:PFAM:PF00226" /note="PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; KEGG: reh:H16_A1620 DnaJ-class molecular chaperone" /codon_start=1 /transl_table=11 /product="heat shock protein DnaJ domain protein" /protein_id="YP_002983787.1" /db_xref="GI:241665428" /db_xref="InterPro:IPR001623" /db_xref="GeneID:8021545" /translation="MTFPPAAATPHMTTIYATLGVQPDATLDEIKRAYRRAAMKWHPD RNPGREAEAYAAFQEIREAYAILCDAEQRRVYDEVFAQEMQRWQAEQEAQEAQEREAQ RERERLAQAHYEKMVAIAMRFADDGHNRDVLFGVLLGRGGDAELAARIADSVWALQEA RRSPEPVTDVSDAQPAPTPEDAPASKADESASPRRAFESFWQGLFGLRP" gene complement(430156..430323) /locus_tag="Rpic12D_3859" /db_xref="GeneID:8021546" CDS complement(430156..430323) /locus_tag="Rpic12D_3859" /inference="ab initio prediction:Prodigal:1.4" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983788.1" /db_xref="GI:241665429" /db_xref="GeneID:8021546" /translation="MTTNKLIDRKRRNLLIGSLHESFNGREARALVSHVAQRLNELGT STNGNWQSFGS" gene 430418..431809 /locus_tag="Rpic12D_3860" /db_xref="GeneID:8021547" CDS 430418..431809 /locus_tag="Rpic12D_3860" /inference="protein motif:PFAM:PF01547" /note="PFAM: extracellular solute-binding protein family 1; KEGG: bph:Bphy_7218 extracellular solute-binding protein" /codon_start=1 /transl_table=11 /product="extracellular solute-binding protein family 1" /protein_id="YP_002983789.1" /db_xref="GI:241665430" /db_xref="InterPro:IPR006059" /db_xref="GeneID:8021547" /translation="MLSSIERPDRRAVARSLPCFASPTGSYRTGSERDVRQSHFARLL SGLIGLLVLSGCHQQDAPITSSPPPHRTSITALIWAPDWPEQMLQIAAEFSKLNPDVQ VDVQFMIGNSVEENIKPRVAAGTLPDLLSVNPNAYSAELADQRVLADVSQTSAWTNML APLKRDWTSRRGKGFGISGGVATTMIYYNREMFEKAGIDKLPANFDEFLRVCAQLKRA GFTPLMLNGAFPNMLGNGPFASGFANNVIAHEPNWKSKMAEGTLDLDTPEVADIFARM ALLPERGYVQASFMATGYDDGMRLFKEGKVAMAFQGSWAAGLLLHGNRFAVGVFIPPW NKRGEQVVPVLGSETGFAVCETPNKAAAMRFLEFIAGKGFPILQRKRHNISPFQQHAE TAVSDPEIADYTNTVSRYLITASPYYSTLPSNTLESLHGLMQDVLLKKMSPRQAAKRL DESVKNEAKMHYK" gene 431806..434748 /locus_tag="Rpic12D_3861" /db_xref="GeneID:8021548" CDS 431806..434748 /locus_tag="Rpic12D_3861" /inference="protein motif:TFAM:TIGR00254" /note="KEGG: bph:Bphy_7217 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase HAMP region domain protein; SMART: EAL domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein" /codon_start=1 /transl_table=11 /product="diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)" /protein_id="YP_002983790.1" /db_xref="GI:241665431" /db_xref="InterPro:IPR000014" /db_xref="InterPro:IPR000160" /db_xref="InterPro:IPR000700" /db_xref="InterPro:IPR001633" /db_xref="InterPro:IPR003660" /db_xref="InterPro:IPR013656" /db_xref="InterPro:IPR013767" /db_xref="GeneID:8021548" /translation="MNSIPRLLQRAFDYLSQDLLRRVEIRHRLVAAFILLSLLPICIS ASISYVNSIAAIKENAEIFSKEVVKQVSRNIELRMRQIEAESNLLVLSNQVQGALARA ASGNGKEQSEARQDMARLLLEHYGSVDFINQKYLLDKNNRILDTQAAAQLTQGVTRLV SRAQDVHGHTYWGSYDNGVGQQNVGVVRAIIDKNSNRQLGNLVLIVRPAYFSTIFNDV ATGSGTQIFILDASNEVIIRAADAANDTGALPEPGLLENIARNATAGEARSFVAIEGK RGGRYLAAYAKIPGTTWFVVSTIAEKKLTAEAQAVRNQIALVGISGVLLSIFLAYFIS HSISAPLRELVRKVHDTGDDAGAQVDEGKHVEAGARAKDELSRLAQRFERMREAIKQK IEKINEINASLEQTVIERTAELVTRERESRTLIENSPDTISRYDRESRRIYANPAFCA SAGCSLTEALGKRPSELPGGDNARVYEKIISDVISSGTSAQFELRWAGKDGQEQCSHV RLTPETDLAGNVLSVLAVGRDLSDRMAFEATIWKQANFDALTGLPNRQMFHERLAQEA SQPGRIGRRMALMLIDLDRFKEVNDSLGHDRGDTLLIEAGKRIGACVRQSDTVARLGG DEFTVILPNLDDAESVERIASTIIDKLAEPFKLGTDEAFVSASVGVTFYPDDAHDLDV LFKNADQAMYAAKNAGRNRFSYFKPDMQVEAEKRLRLTSDLRVALPSGQFQVYYQPIV ELATGEVCKAEALIRWLHPERGTISPHDFISVAEDTGLIVSIGDWVFKQAVQQARQWR DQFHPSFQISVNMSPVQMRQDGQLCARWSDFLAREGLPVQSVMVEITEGLLLQAESRT DETLLALRSAGIGISIDDFGTGYSSLSYLQRFDIDYLKIDRSFVHNLSFDEDNQALCE AMVVLAHKLGLKVIAEGVETAEQRDFLKAVDCDFAQGFLYSTPVLPHEFERRVWPMSE RRAADASA" gene complement(434985..435890) /locus_tag="Rpic12D_3862" /db_xref="GeneID:8021549" CDS complement(434985..435890) /locus_tag="Rpic12D_3862" /inference="protein motif:PFAM:PF03466" /note="PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pap:PSPA7_0301 MdcR" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LysR family" /protein_id="YP_002983791.1" /db_xref="GI:241665432" /db_xref="InterPro:IPR000847" /db_xref="InterPro:IPR005119" /db_xref="GeneID:8021549" /translation="MAIDEDITLKKLEVFQSFMTLGNMARVSEALGQSTVSVHRALHS LEEGLRCPLFKRDGRKLIPLSTAYVFAEHVERILAECEAGVRRTREAAGFSSTTLKIG GLYSMTVGTLPRIFAGLKTRRSALDIELTLGSNRSLLAKLEDGQLDAIVIALGEPLRN PDLLTVPMFDDEILFAAPLGSPYAASAEIDLQTVHGEKFVALGDDFATYHDFMAAFDK AGFAPQIALRVGDIFSLMNLVSGGIGYALLPRRVADFSPKVQLIPLAARYAISQHIVL VIQRNRERDPNLLALSAECRLLGAR" gene 436056..437744 /locus_tag="Rpic12D_3863" /db_xref="GeneID:8021550" CDS 436056..437744 /locus_tag="Rpic12D_3863" /inference="protein motif:TFAM:TIGR01110" /note="TIGRFAM: malonate decarboxylase, alpha subunit; KEGG: pap:PSPA7_0292 malonate decarboxylase alpha subunit" /codon_start=1 /transl_table=11 /product="malonate decarboxylase, alpha subunit" /protein_id="YP_002983792.1" /db_xref="GI:241665433" /db_xref="InterPro:IPR005777" /db_xref="GeneID:8021550" /translation="MQPMPAQSANGANAPIPPQWRRRHDEKERRLAAARRIANGKVIP TGDIVAALEALLAPRDRVVLEGNNQKQADFLSRSLAKVNPERLHDLHMIMPSVSRAEH LDIFEAGIAHKLDFSFAGPQSLRISQLLADGLLEVGAIHTYIELYARLVVDLIPNVSL VAGFKADRDGNIYTGPSTEDTPALVEPTAFSDGIVIVQVNEIVDDPADLPRVDIPGSW VDFIVQADKPFYIEPLFTRDPRLIKPVHVLMAMMAIRGIYQRHNVQSLNHGIGFNTAA IELILPTYGERLGLKGKICRNWTLNPHPTLIPAIESGWVESVHCFGTELGMERYVAAR PDVFFTGRDGSLRSNRMLCQLAGQYAVDLFIGATLQVDGDGHSSTVTRGRLAGFGGAP NMGHDPRGRRHATPAWLDMTEPVTMLERGKKLVVQMVETFQEGGKPTFVDTLDAVAVA KQSGMPLAPIMIYGDDVTHLLTEDGIAYLYKARSLEERRAMIAAVAGVTSIGLRHDPS KTEQMRRDGLIALPEDLDVRRSDASRELLAAKSIADLVEWSGGLYDPPARFRSW" gene 437744..438673 /locus_tag="Rpic12D_3864" /db_xref="GeneID:8021551" CDS 437744..438673 /locus_tag="Rpic12D_3864" /EC_number="2.7.8.25" /inference="protein motif:TFAM:TIGR03132" /note="KEGG: reu:Reut_B4926 triphosphoribosyl-dephospho-CoA synthase; TIGRFAM: triphosphoribosyl-dephospho-CoA synthase MdcB; PFAM: triphosphoribosyl-dephospho-CoA protein" /codon_start=1 /transl_table=11 /product="triphosphoribosyl-dephospho-CoA synthase MdcB" /protein_id="YP_002983793.1" /db_xref="GI:241665434" /db_xref="InterPro:IPR002736" /db_xref="InterPro:IPR017555" /db_xref="GeneID:8021551" /translation="MEKTLQRPLPASPKARAKRLAALVESALIDEVTLSPKPGLVDVR GNGAHHDLDWTLMVHSAQTLRPAFEAMALAGAQIETQAGAQLALRERIGRLGREGEAA MFDATGGINTHRGAIWALGLLVTAAAQAPHALSAAAVAGRAAQLANIPDRFAPVSTGH KGERACNDYGVGGAKGQACAGFPHVIKVALPALHHARAAGIREDHARVDALLAVMAAL DDTCVLARGGAKALHVVQTGAATVRAEGGLATAQGRRAFRTLEQDMLALHVSPGGAAD LLAAALFLDRLPTDARVASDTESAHQETEHGAA" gene 438660..438965 /locus_tag="Rpic12D_3865" /db_xref="GeneID:8021552" CDS 438660..438965 /locus_tag="Rpic12D_3865" /inference="protein motif:TFAM:TIGR03130" /note="TIGRFAM: malonate decarboxylase acyl carrier protein; PFAM: malonate decarboxylase delta subunit; KEGG: pna:Pnap_0948 malonate decarboxylase subunit delta" /codon_start=1 /transl_table=11 /product="malonate decarboxylase acyl carrier protein" /protein_id="YP_002983794.1" /db_xref="GI:241665435" /db_xref="InterPro:IPR009662" /db_xref="GeneID:8021552" /translation="MEQLDFQFTGGAPAARRAYAGVVGSGDLEVLLTPGNAGQIDVAI TTSVNGMSATWQAQLARVFGSHAWPAAKIIINDFGATPAVVRLRLEQALESLNTLGS" gene 438975..439820 /locus_tag="Rpic12D_3866" /db_xref="GeneID:8021553" CDS 438975..439820 /locus_tag="Rpic12D_3866" /inference="protein motif:TFAM:TIGR03133" /note="TIGRFAM: malonate decarboxylase, beta subunit; KEGG: pna:Pnap_0949 malonate decarboxylase subunit beta" /codon_start=1 /transl_table=11 /product="malonate decarboxylase, beta subunit" /protein_id="YP_002983795.1" /db_xref="GI:241665436" /db_xref="InterPro:IPR011762" /db_xref="InterPro:IPR017556" /db_xref="GeneID:8021553" /translation="MSRNPIERDSFIERDARRRAIALLDPGTFRELLDPFEQLTSPWL PRQGIVTQADDGVVVARGTLGGQPAVVLAIEGAFQGGSMGEVSGAKIAGALELAAEDN RNGIPTRVVIVFETGGVRLQEANLGLAAIAEIHAGIRALREYGPVIGITAGVVGCFGG MSIAAGLCSYLLMTREARLGLNGPQVIEQEAGIEEYDSRDRPFIWSLTGGEQRAATGL ADVCIEDDSVAIRAQVIEWLRAGAPKHQRSEQIDHYLAQLAAVDTSRQATAEDVRTHY AKDVA" gene 439817..440647 /locus_tag="Rpic12D_3867" /db_xref="GeneID:8021554" CDS 439817..440647 /locus_tag="Rpic12D_3867" /inference="protein motif:TFAM:TIGR03134" /note="TIGRFAM: malonate decarboxylase, gamma subunit; PFAM: malonate decarboxylase gamma subunit; KEGG: pna:Pnap_0950 malonate decarboxylase gamma subunit" /codon_start=1 /transl_table=11 /product="malonate decarboxylase, gamma subunit" /protein_id="YP_002983796.1" /db_xref="GI:241665437" /db_xref="InterPro:IPR009648" /db_xref="GeneID:8021554" /translation="MSQNELSTRGATWMRALADGTPVPGYGSTLQVVDAALAGQPARY IAVVPDAENRFPRARNGEVGLIEGWQLARAVRDAMTADAGQEKKRAIVAVIDVASQAY GRREEAYGIHLALAAAADAYAAARLGGHPVIGLIVGRAMSGALLAHGYQANRLLALDD ADVMVHAMGKAAAARVTLRSVADLERLAQEIPPMAYDIASFASLGLLWKLLKVKSADA PDAGDVDTVQTALAAALANIAADPSRGLESRLGAPLRSASSEVRKRLREQWNTQSEGA" gene 441018..441425 /locus_tag="Rpic12D_3868" /db_xref="GeneID:8021555" CDS 441018..441425 /locus_tag="Rpic12D_3868" /inference="protein motif:TFAM:TIGR00807" /note="TIGRFAM: malonate transporter, MadL subunit; PFAM: malonate transporter MadL subunit; KEGG: reu:Reut_A1611 malonate transporter MadL subunit" /codon_start=1 /transl_table=11 /product="malonate transporter, MadL subunit" /protein_id="YP_002983797.1" /db_xref="GI:241665438" /db_xref="InterPro:IPR004690" /db_xref="GeneID:8021555" /translation="MIIYGTTLLALCHLAGLFLGDLLGQAIGVKANVGGVGIAMLLLI FARLYLHRHGLMPAATEAGVSFWGAMYIPVVVAMAATQNVVTALRGGPVALLGAIGAV IVCGVCIALINRTGNAEDRRPLPPLPETEQARA" gene 441437..442201 /locus_tag="Rpic12D_3869" /db_xref="GeneID:8021556" CDS 441437..442201 /locus_tag="Rpic12D_3869" /inference="protein motif:TFAM:TIGR00808" /note="TIGRFAM: malonate transporter, MadM subunit; PFAM: malonate/sodium symporter MadM subunit; KEGG: bcm:Bcenmc03_1240 malonate transporter, MadM subunit" /codon_start=1 /transl_table=11 /product="malonate transporter, MadM subunit" /protein_id="YP_002983798.1" /db_xref="GI:241665439" /db_xref="InterPro:IPR004691" /db_xref="GeneID:8021556" /translation="MLSMLEKVLQHNGLVAAFALVGIVMGLSMWVSKKLTFGRVHGSA IAIMIGLVLAYWGGMQTGGERGLADLKLFGGIGLMGGAMLRDFAIVATAFEVQVTEAR KAGMIGAVSLLLGTVLPFIVGACVAYAFGYTDPVSVTTIGAGAVTYIVGPVTGAALGA TSDVMALSIATGLVKAILVMVGTPFAAKALGLNNPRAAMVFGGLAGTVSGVSAGLAAT DRRLVPYGSLVATFHTGIGCLLGPSILFLATQALLR" gene 442198..442833 /locus_tag="Rpic12D_3870" /db_xref="GeneID:8021557" CDS 442198..442833 /locus_tag="Rpic12D_3870" /inference="protein motif:TFAM:TIGR03135" /note="TIGRFAM: holo-ACP synthase, malonate decarboxylase-specific; KEGG: pna:Pnap_0951 phosphoribosyl-dephospho-CoA transferase" /codon_start=1 /transl_table=11 /product="holo-ACP synthase, malonate decarboxylase-specific" /protein_id="YP_002983799.1" /db_xref="GI:241665440" /db_xref="InterPro:IPR017557" /db_xref="GeneID:8021557" /translation="MTPTPLRAHDLLWVSETPVATDDAPLPDWAITACRQGSPVVVRR APRGNDGAVPVGLRGGARHERCAATVSASSITRVVSPEALAATTASIAPDAPFAALRT LRALATKFDALGWAWGPTGGAGFALASGLPVLHADSDLDLVLRMPHAPSAAQRNQLVH VLAETECRVDLQIDTARGGFAWRDWLASPHQTLLKTDHGPHLVADPWSECA" gene 442830..443765 /locus_tag="Rpic12D_3871" /db_xref="GeneID:8021558" CDS 442830..443765 /locus_tag="Rpic12D_3871" /inference="protein motif:TFAM:TIGR03131" /note="TIGRFAM: malonate decarboxylase, epsilon subunit; PFAM: Acyl transferase; KEGG: pae:PA0214 acyl transferase" /codon_start=1 /transl_table=11 /product="malonate decarboxylase, epsilon subunit" /protein_id="YP_002983800.1" /db_xref="GI:241665441" /db_xref="InterPro:IPR014043" /db_xref="InterPro:IPR017554" /db_xref="GeneID:8021558" /translation="MSVLFMFPGQGSQRVGMLHTLPDDPAVAQTLSEAGDVLSVDPLT LDTAEALRSTVAVQLCLLIAGVAVARTLVRQDAGPDMVAGLSIGAWPAAVIAGVLEFS DALCLVCLRGQLMEDAYPSGYGMAVTAGLTEPEVAAIVAQVNSAATPAYVANLNAERQ IVVAGSDAALTQVMTRAHAAGASTATRLCMAVPSHCPLLDAQAAELATAAAKATAHPP QLTYVSSSRARALFRANLIVEDLAWNMARPVLWHDSLRHALERGARMAVEIAGNGALM RLAQPVFANDAVLDASSGLDAVRVRIQRQRRLDSR" gene complement(443817..445412) /gene="prfC" /locus_tag="Rpic12D_3872" /db_xref="GeneID:8021559" CDS complement(443817..445412) /gene="prfC" /locus_tag="Rpic12D_3872" /inference="protein motif:TFAM:TIGR00503" /note="TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: rso:RSp1662 peptide chain release factor 3" /codon_start=1 /transl_table=11 /product="peptide chain release factor 3" /protein_id="YP_002983801.1" /db_xref="GI:241665442" /db_xref="InterPro:IPR000795" /db_xref="InterPro:IPR004161" /db_xref="InterPro:IPR004548" /db_xref="InterPro:IPR005225" /db_xref="GeneID:8021559" /translation="MSTLQQEIRRRRTFAIIAHPDAGKTTLTEKLLWFGGAIQMAGAV RARKANRHATSDWMEMEKQRGISVTSSVMQFPYRNEGGDYIVNLLDTPGHEDFSEDTY RTLTAVDSAVMVIDSVNGVEAQTIKLLNVCRLRSTPILTFINKLDREGRAPIELLDEI ESVLQIQCAPMTWPIGMGKSFKGVYHLVNDTVQLFDPNADSEKGATAGLIQGLDNPEL DRVLGSQAEELRIDIELVRGASHTFDKEAFLAGKQCPVYFGSAVNNFGVQSLLDALVD QSPEPLARPTETREVKPMEEKFTGFVFKIQANMDPKHRDRIAFVRVCSGRFERGMKLL QVSTGKTVAINNAITFMAQDRNTTEEAFAGDIIGVPNHGTIRLGDAFTEGEALKFTGI PSFAPEFFRRARLNNPLRLKQLQKGLQQLAEEGATQMFRPLASNDLVLGAVGILQFDV VAHRLEHEYGVDAIFEPHECSTARWLRGKQEDIDKLIDKAGHNVALDGAGDYVYLAPS QVNLRLTQERFPDIQFMETREIV" gene 445693..446001 /locus_tag="Rpic12D_3873" /db_xref="GeneID:8021560" CDS 445693..446001 /locus_tag="Rpic12D_3873" /inference="ab initio prediction:Prodigal:1.4" /note="KEGG: rso:RS02222 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983802.1" /db_xref="GI:241665443" /db_xref="GeneID:8021560" /translation="MKLPYCGGRRESCFAIRKDVKKEGVQIVRSRTPVDPAVQRILET TRKAWQLDAESVRAARQQRAANRRKRIKALPQDSLQALAALALQAEIWAVRKTVVTVG" gene 446124..446426 /locus_tag="Rpic12D_3874" /db_xref="GeneID:8021561" CDS 446124..446426 /locus_tag="Rpic12D_3874" /inference="ab initio prediction:Prodigal:1.4" /note="KEGG: pol:Bpro_3432 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983803.1" /db_xref="GI:241665444" /db_xref="GeneID:8021561" /translation="MTEPIPTPSTTGSHGATITALHPQIDHTAQRVKDATAEGIDRLA GVISTALTQFDKRTEQLKHLHANVSEQASGSVRQHPVLTIGLAFVAGMLLEQLTRD" gene complement(446441..447430) /locus_tag="Rpic12D_3875" /db_xref="GeneID:8021562" CDS complement(446441..447430) /locus_tag="Rpic12D_3875" /inference="protein motif:PFAM:PF03631" /note="PFAM: ribonuclease BN; KEGG: rso:RS02223 putative ribonuclease RNase BN (RBN) transmembrane protein" /codon_start=1 /transl_table=11 /product="ribonuclease BN" /protein_id="YP_002983804.1" /db_xref="GI:241665445" /db_xref="InterPro:IPR004664" /db_xref="GeneID:8021562" /translation="MRLAGSFLDRDVFRRTARILLGAAQQWSAHRAASKGAALSFYTL FSMAPVLVLVISIAGLFFGEQAARGEIFGQIQGLVGAQGAAAVETILAATKRSGHGLF AAVMALALLVVGATTAFSELKDSLDELWDVPPRQQPGLWGLLRSRLLSFSLVLVLAFL LLVSLIINAALAVLERFWGAIWESAGLFAPIAEAFSSVFSFAVVSLLFGTIFKMLPET RVAWRDVALGAVVTALLFTLGKHLIGLYLGNSAVASSYGAAGSVVALMLWIYYSAQIF FFGALVTRQYALQFGSRQHETAGPGAQAALLNPALAANLASGSGTGPGVREGR" gene complement(447515..447820) /locus_tag="Rpic12D_3876" /db_xref="GeneID:8021563" CDS complement(447515..447820) /locus_tag="Rpic12D_3876" /inference="similar to AA sequence:KEGG:RS02224" /note="KEGG: rso:RS02224 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983805.1" /db_xref="GI:241665446" /db_xref="GeneID:8021563" /translation="MELSETNPFPKSDGHGNLIRDDVAQAAERVKATTAQAIDRTADA AATALDEAAVKREQWRASQQRLMSDAAECMRTHPLATIGLAFGAGFLLSRLLGGRDD" gene complement(447874..448041) /locus_tag="Rpic12D_3877" /db_xref="GeneID:8021564" CDS complement(447874..448041) /locus_tag="Rpic12D_3877" /inference="protein motif:PFAM:PF07043" /note="PFAM: protein of unknown function DUF1328; KEGG: rso:RS02225 hypothetical protein" /codon_start=1 /transl_table=11 /product="protein of unknown function DUF1328" /protein_id="YP_002983806.1" /db_xref="GI:241665447" /db_xref="InterPro:IPR009760" /db_xref="GeneID:8021564" /translation="MLRYALIFFIIAVIAAVLGFGGIAAGAASIAKILFMIFVVLFVV SLIWGLVAGRG" sig_peptide complement(447874..447957) /locus_tag="Rpic12D_3877" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.415 at residue 28" gene complement(448161..449567) /locus_tag="Rpic12D_3878" /db_xref="GeneID:8021565" CDS complement(448161..449567) /locus_tag="Rpic12D_3878" /inference="protein motif:PFAM:PF00158" /note="PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase; KEGG: rso:RS02226 sigma-54 interacting response regulator transcription regulator protein" /codon_start=1 /transl_table=11 /product="two component, sigma54 specific, transcriptional regulator, Fis family" /protein_id="YP_002983807.1" /db_xref="GI:241665448" /db_xref="InterPro:IPR001789" /db_xref="InterPro:IPR002078" /db_xref="InterPro:IPR002197" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR011704" /db_xref="GeneID:8021565" /translation="MPHILIVEDDANARAALGELVGAEGFTTALAGSLRDARIQMSRH SPDAVLIDLILPDGNGMDLMEDIAPHSGTEIIVMTGHASVETAVEALRMGAADYLVKP VNFQRLKSVLARIPRPGDLKAEIGNLRGELRRLGLFGQMLGNSTVMQTLYDQVSRVAP TEATVLLIGESGTGKELAAQTIHDLSLRRKQPFLPVNCGAISPNLIESEMFGHERGSF TGADRQHKGYFERANGGTLFLDEITEMPIELQVKLLRVLETGVFMRVGTNREIDSDVR VIAATNRDPEEAVADGKLRADLYHRLNVFPLQLPPLRERGKDVELLAQHFLDQLNAQS NTKKAFLPPAMETLRAYNWPGNVRELRNYVQRAYILSDDAGIDTANVPLQVSSTQTGS GGSTLTIPVGTSLASADKKIILATLEQCGGVKKRAAELLGISLKTLYNRLEEYNSNSD ADDGGDDTGPGRAHITEA" gene 450104..451201 /locus_tag="Rpic12D_3879" /db_xref="GeneID:8021566" CDS 450104..451201 /locus_tag="Rpic12D_3879" /inference="protein motif:PFAM:PF00158" /note="PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rso:RS02227 sigma-54 interacting transcription regulator protein" /codon_start=1 /transl_table=11 /product="sigma54 specific transcriptional regulator, Fis family" /protein_id="YP_002983808.1" /db_xref="GI:241665449" /db_xref="InterPro:IPR002078" /db_xref="InterPro:IPR002197" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR011704" /db_xref="GeneID:8021566" /translation="MSLSEAFADEHATTAGRLPCPPSLTDMAEFDDVDPAAAQAIAIA EPDFGHLYGRSPVMRALYNQIGKVSGTLATVLIIGESGTGKELIARTVHDMSPRADQA FIAVNCGAISPNLIESELFGHEKGSFTGATQRHTGYFEHACGGTIFLDEITEMPVEMQ VKLLRVLETGVFMRVGGTEPIQTRARIIAATNRNLMEAVADGAFREDLMYRLAVVPLH VPPLRDRGDDIEELALHFLAQFNAAHQTDKVFSRTALTVLHNHGWPGNVRELRNAVQR GYILGEKTVDLDNPISSPRGPTRPTVKEGVLNLSVGVTLAEAQRAMILATLEHFHGDK RQAAKTLGVSLKTLYNRLDLYQGAAAAGMAA" gene complement(451260..451406) /locus_tag="Rpic12D_3880" /db_xref="GeneID:8021567" CDS complement(451260..451406) /locus_tag="Rpic12D_3880" /inference="ab initio prediction:Prodigal:1.4" /note="KEGG: rso:RS02228 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983809.1" /db_xref="GI:241665450" /db_xref="GeneID:8021567" /translation="MPMSSAEPRRMGPRMRAETEPAPRRPAPPPHERRRHEHPGERTH AHPR" gene complement(451424..451744) /locus_tag="Rpic12D_3881" /db_xref="GeneID:8021568" CDS complement(451424..451744) /locus_tag="Rpic12D_3881" /inference="similar to AA sequence:KEGG:RS02229" /note="KEGG: rso:RS02229 putative signal peptide protein" /codon_start=1 /transl_table=11 /product="putative signal peptide protein" /protein_id="YP_002983810.1" /db_xref="GI:241665451" /db_xref="GeneID:8021568" /translation="MHSRTLIAAIASAALTFGTTVAVAQSTTPPAPAADGQSAVPAAG AAEAHASTGKPMHRKSRHHKTSKAKGGANSAGDMSHSGVQSGGNEAATTTGNSQPATS RQDQ" sig_peptide complement(451424..451498) /locus_tag="Rpic12D_3881" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.974 at residue 25" gene 452057..453559 /locus_tag="Rpic12D_3882" /db_xref="GeneID:8021569" CDS 452057..453559 /locus_tag="Rpic12D_3882" /inference="protein motif:TFAM:TIGR02395" /note="TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor core-binding region; sigma-54 factor; KEGG: rso:RSp1671 RNA polymerase factor sigma-54" /codon_start=1 /transl_table=11 /product="RNA polymerase, sigma 54 subunit, RpoN" /protein_id="YP_002983811.1" /db_xref="GI:241665452" /db_xref="InterPro:IPR000394" /db_xref="InterPro:IPR007046" /db_xref="InterPro:IPR007634" /db_xref="GeneID:8021569" /translation="MVKAALEMRAKQHLALTPRLQQSVKLLQLSATEFAQEMQEALAS NPFLEEVEQEAGAQPDATRANDLPGPADLDGSGTDHTPSEALPLETTTSAIETDPALA TADEFPADFGTYYSHGGAHHGDGEDSDIGEWVHATPSLREHLHQELRSYRLSQRDCLL GQTVIEALDDDGYLRQLLSELIPLAPVEPPPTEKEMQIALALVQSLDPPGVAARDLSE CLRLQIEARPADTEAEERIQEVAHDIVRSHLPRLAKREFTQMRRALGCTEDELRDACA LIRMLDPRPGLRFSQAHAGYIVPDVIVAKIRGKWIAVTNPAVAPCARINKVYAELFAQ TRGYHRTPLAHQLQEARWLIRNAQQRFATIQRVAEAIVAHQKHFLEYGEVAMKPLVLR DVAEELGLHESTISRATGNKYMATPRGIFEFKYFFSRQLATDTGGACSAASVRALLKE MIEAEDADAPLSDVSLAKMLAEQGVIVARRTVAKYRGLMRIAPAEMRRQV" gene 453586..454785 /locus_tag="Rpic12D_3883" /db_xref="GeneID:8021570" CDS 453586..454785 /locus_tag="Rpic12D_3883" /inference="protein motif:PFAM:PF00534" /note="PFAM: glycosyl transferase group 1; KEGG: eba:ebA6934 glycosyltransferase" /codon_start=1 /transl_table=11 /product="glycosyl transferase group 1" /protein_id="YP_002983812.1" /db_xref="GI:241665453" /db_xref="InterPro:IPR001296" /db_xref="GeneID:8021570" /translation="MRKLPIDHAMNDAAEASLHLADVTMFWAAESGGVKRYLRAKHDF LRSTHWRHTLVVPGIAEDATNAIAVVPGVPLPLSHGYRIPLRAGPAERALCALSPDLI EAGDPYRLSWAALRAGARLGVPVAAFCHSDLPAFFRRLGGAPAEHFAAAYARRLYPHF DTVFAPSRYVAQKVAELGVQQVELQPLGVDTRLFHPARRSLRWRAQLGLPRDARVLLY VGRYAPEKNLHVLCDAVDRLDDGTLLVTIGSGPTPPRGRHVRALPYEGDAQQLAAAMA SADAFVHAGDQETFGLVALEAMASGLPVVACAAGGLGELVDEHVGYAVPRCSADDFAQ ALHALRRRDPVALAHAARRHAMHYDWRAVLPQLLRRYLALLGRQASAASDPLHVTRVR PRTARIR" gene 454804..455598 /locus_tag="Rpic12D_3884" /db_xref="GeneID:8021571" CDS 454804..455598 /locus_tag="Rpic12D_3884" /inference="similar to AA sequence:KEGG:RS02231" /note="KEGG: rso:RS02231 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983813.1" /db_xref="GI:241665454" /db_xref="GeneID:8021571" /translation="MSRYLILAMHDVTPATWPACKVLLNALDEVCRVPKSLLVIPNFY RGPTARNSDRFCRLMSECLAEGDELVLHGYAHLDDQPPGGILDQLIRTRYTAGEGEFA AIPLAAARHRIEAGAAWFAANGWPLHGFVAPAWLMNAATWQALDGLPLRYTTTLRRFF LLHPTRALAAPCLTYSVRTPARRLVSRYYLQWLARQHANLPVLRLGLHPADAAHRDVI RHWQELLASSLETRTPVTKNGFAQVFTQAWMSGPETASAGHPQTSY" gene complement(455605..456141) /locus_tag="Rpic12D_3885" /db_xref="GeneID:8021572" CDS complement(455605..456141) /locus_tag="Rpic12D_3885" /inference="protein motif:PFAM:PF01569" /note="PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: eba:ebA6940 hypothetical protein" /codon_start=1 /transl_table=11 /product="phosphoesterase PA-phosphatase related" /protein_id="YP_002983814.1" /db_xref="GI:241665455" /db_xref="InterPro:IPR000326" /db_xref="GeneID:8021572" /translation="MATHVWPDWKRWRERDRRLAVALNNVAGDPSVMRFYRGVSRLGD GMLWYALMAALPVVGGDTGWECAKQMGLTGLLSLVIYIVLKRGVCRPRPYLSCEEIHL CGRVLDQFSFPSGHTLHAVSFSIVMAAYYPRMALALAPFTLMVALSRVILGLHYPSDV LAGAGLGVLIGGLSVWLF" gene complement(456119..457291) /locus_tag="Rpic12D_3886" /db_xref="GeneID:8021573" CDS complement(456119..457291) /locus_tag="Rpic12D_3886" /inference="protein motif:PFAM:PF00534" /note="PFAM: glycosyl transferase group 1; KEGG: lch:Lcho_3607 glycosyl transferase group 1" /codon_start=1 /transl_table=11 /product="glycosyl transferase group 1" /protein_id="YP_002983815.1" /db_xref="GI:241665456" /db_xref="InterPro:IPR001296" /db_xref="GeneID:8021573" /translation="MRIAYVTETWPPELNGVSLTAARTVAFLRAREHDVMLVRPRQRV IDTGQPPLSGGTLRVRGMPIPRYPALRMGLPARRGLVRAWRAYRPDLVHVATEGPLGW SAIRAARQLGVPVTSDFRTRFDEYGRHYAWDGAAALVRAYLRAFHNRTDRTFVPTREL QRQLRALAFERLSISTRGVDARQFAPHHRSEALRAQWHAADDAPVVLTVGRLAVEKNL GVALDAFDAIRHNVPGARLVMVGDGPLRRVLQQRCPEAVFAGMQQGQALAAHYASADL FLFPSLTETFGNVVVEAMASGLPVVAFDTAAAGMHVRSGENGLLVPVGDAGAFVRAAT ELAADAALCCRLGGAARQTAQTLDWPRVLERFEAALMAVHHAAVAGGAYHGDPRLA" gene complement(457300..457731) /locus_tag="Rpic12D_3887" /db_xref="GeneID:8021574" CDS complement(457300..457731) /locus_tag="Rpic12D_3887" /inference="similar to AA sequence:KEGG:RS02233" /note="KEGG: rso:RS02233 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983816.1" /db_xref="GI:241665457" /db_xref="GeneID:8021574" /translation="MIPHRDAVVCGANQRDATSAGASPPRPPAAEREECVDAVLGKPE QDIPERRTADRPPHARDERLEAQRSGPRADIEQAARDIDSGQLDTDLHNTPGVERVVR EHHAANREDPDRRVANRSADDLADKRNEAGRPGPSRAERKP" gene complement(457933..459252) /locus_tag="Rpic12D_3888" /db_xref="GeneID:8021575" CDS complement(457933..459252) /locus_tag="Rpic12D_3888" /inference="protein motif:PFAM:PF01594" /note="PFAM: protein of unknown function UPF0118; KEGG: aav:Aave_2002 protein of unknown function UPF0118" /codon_start=1 /transl_table=11 /product="protein of unknown function UPF0118" /protein_id="YP_002983817.1" /db_xref="GI:241665458" /db_xref="InterPro:IPR002549" /db_xref="GeneID:8021575" /translation="MPRPRGTGRTTFLAMSDPLPTHSTQAPPGPGPAPQPTLLTGLQQ PAWRLAMVLVAIGGTLVFLQWARVFLVPLTFGVVLAFALNPLVVRLQHWYVPRPVAAA VIVLGLWLAGGAVVFGMQDGVSAVAERVPLAAERMAESVDRVRDRLSGAVDKMRQVTT AVEHATEGVPAKPPSQPARRPAAAAPPAPHDTLPVLPLREFVWTGSASLFALAGQLVV VSFLVYFLLASGQALKRKWVRAVGRTLSEKKRAVRMMAGIGTQIQYSLLVLFASNIML GILTAVAFALLGMDDATVWGLAAAVLHFVPYLGSVVMVVASGIGAYLQMGTWADALIV AGTTLVFATLVGTLLMTWLQSRASKLDPCVVYIGLLLWGWLWGVWGLLLGTSVTAMIK VVCDHVERLRPLGVLLGTTDAPAGVWQRLLDRLRGRPTRRRQGAPRR" gene complement(459254..461638) /locus_tag="Rpic12D_3889" /db_xref="GeneID:8021576" CDS complement(459254..461638) /locus_tag="Rpic12D_3889" /EC_number="2.7.13.3" /inference="protein motif:TFAM:TIGR00229" /note="KEGG: rso:RS02235 composite two-component sensor kinase and response regulator hybrid transcription regulator protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold-3 domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; PAS domain containing protein" /codon_start=1 /transl_table=11 /product="PAS/PAC sensor hybrid histidine kinase" /protein_id="YP_002983818.1" /db_xref="GI:241665459" /db_xref="InterPro:IPR000014" /db_xref="InterPro:IPR000700" /db_xref="InterPro:IPR001789" /db_xref="InterPro:IPR003594" /db_xref="InterPro:IPR003661" /db_xref="InterPro:IPR004358" /db_xref="InterPro:IPR005467" /db_xref="InterPro:IPR013655" /db_xref="InterPro:IPR013656" /db_xref="InterPro:IPR013767" /db_xref="GeneID:8021576" /translation="MSTSVSGLLAPAHRVPQARVVFFGGKLLDVFWIDDPLTGTRLHV SAAAQTWGVRAESLCGDREQWLAHVHPDDHAALRAAWDGLARGQDFVLEYRWIGVDHR EQRVRERGYLMPSPNGGPAHAVGVIEDVTQRQQTLTALTESEFQLQWLTESVPFPLVQ IDPEHRVRFANRAYAQRFGMLPDAVVGSHLRAVMGEAAYARILAHLGEGFAGRRVDFE IELPYPEDIGSRFVHAAYSPQQGPDGSVQALVCLEEDITERKEAERERYRHQREFVTL VENAPDVIARLDRDLHCVYVNCAVIHAFGVTPAAMTGRTLSASPLPATVAGPLDAAAR LAFTTGAEQTLTLHLDAGERRTGIAHYNVRVIPEEDRTGTIESAMLIVYDVTERTEAE RERDALLLREQTARAHAEAATLARDQFLAVVSHELRSPLNGIQNWTYVLENQLSDGSP LVQRALAGIKTGVEQQVRLIEDLLDATRVMSGKLRLTREPFVLSLAIERALNSVRALA AERGITLHVASLLEAHEIDGDADRVEQIVWNLLTNAIKFTHEGGDVWLSADLVGEVAR IVVRDNGRGIGPAFLPYLFDPFRQADGAHTRRTGGLGLGLALVKRLTELHGGRVHAHS DGERSGAVFTVYLPLHAGAELTPPLAEDLARSGPLPSLAGLRVLLVDDQQDARDALAT LLAQVGADVASVGSGQEAMTQLDTWGVPARPRAVVCDIALPDEDGYAILQKIRTWERL HVPAGASPIAAIALTAFAQPDDRARALASGFQEHLVKPVSPYDLVRTLRNLAAP" gene complement(461723..462505) /locus_tag="Rpic12D_3890" /db_xref="GeneID:8021577" CDS complement(461723..462505) /locus_tag="Rpic12D_3890" /inference="similar to AA sequence:KEGG:Bcen2424_4033" /note="KEGG: bch:Bcen2424_4033 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983819.1" /db_xref="GI:241665460" /db_xref="GeneID:8021577" /translation="MKMQIKKIAAVLLLGSLGMLAACGGGSDDIGQIIGTSSPQYRTM HVNPFIGNVDFGVNGTTRIANVGFKNVSNYFGIDAVATTATVSNAGSATPLASANFNP ANGHRYTALAIVGATASATSLAIIDDPYDKSILSDKARVRTFNAAYNAPNVDVYVTAP NADISAVPPTMGGAAYGSASPASTQDSIYVDGGTYEIRVTTAGTKSVIFASQPFSLAN NADWLITTLPAGGAGTVTPNAIRVLVAQANGASQTASELPAQ" sig_peptide complement(461723..461797) /locus_tag="Rpic12D_3890" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.908 at residue 25" gene 462798..464081 /locus_tag="Rpic12D_3891" /db_xref="GeneID:8021578" CDS 462798..464081 /locus_tag="Rpic12D_3891" /inference="similar to AA sequence:KEGG:RS02236" /note="KEGG: rso:RS02236 putative prolin-rich protein" /codon_start=1 /transl_table=11 /product="putative prolin-rich protein" /protein_id="YP_002983820.1" /db_xref="GI:241665461" /db_xref="GeneID:8021578" /translation="MFDPRPANAAPLPHHAASQADPQAFALERERVQAWLDARASGAR AVGASTLSQYRVEADRVCWYARTVGKPIAAWQREDALTYLRFLQDPPPWAISARGIDR SDVNWTPLRGALSARSTRQCSIIAANLCGWLQRAGYLRANPFLDDDAIVITVPPPEAG TGTATEASIAGATPTQPQSRLSAADMGLIVDAVRARVALGREARLRQARDHFLAVLLA HASLRVAELVAARMGDVALHAVPPADAAPDASLPASVWLLRAGSGRSQRWLPCDAIMG ALREYRTAFGLSPLPLPNEATPLLLSVRRRSPRRADGSIIDSPSLRRDFGERKGLASR SQLLLIVKAMLSEAVDYARAMGQPDAAARLAHASLRGVRTAHLRERLAAGEAAADVAR ALGLAALPAVAVRAREADLAASIADAARKLATPSA" gene complement(464355..465659) /locus_tag="Rpic12D_3892" /db_xref="GeneID:8021579" CDS complement(464355..465659) /locus_tag="Rpic12D_3892" /inference="protein motif:PFAM:PF00860" /note="PFAM: Xanthine/uracil/vitamin C permease; KEGG: rso:RS02237 hypothetical protein" /codon_start=1 /transl_table=11 /product="Xanthine/uracil/vitamin C permease" /protein_id="YP_002983821.1" /db_xref="GI:241665462" /db_xref="InterPro:IPR006043" /db_xref="GeneID:8021579" /translation="MTWLTRFFKLKEHQTDVRTEVLAGLTTFLTMAYIVFVNPNILAD AGMPHDAVFVATCIAAATGTIIMGMYANYPIAMAPGMGLNAYFAYAVVKGMGFTWQAA LGAVFISGCLFLLVSVFRIREMIVNGIPHSIRVAITAGIGLFLGIVSLRGAGLVVGNP ATLVSLGDVHQPSVILAVIGFFLIVALDHLRVKGAILIGILAVTAASFFFAGNTFHGV VSMPPSLTPTLLQLDIMGALSVGILNVVLVFFLVELFDATGTLMGVANRAGLLKQGKM DRLNKALLADSTAIMAGSLLGTSSTTAYIESASGVQAGGRTGLTALTVAVLFLLCLFF SPLAGVVPAYATAPALLYVSCLMLRELVDLNWEDTTEAVPAVLTALMMPFTYSIANGV AFGFITYSGLKLFTGRAREVPIIVWIISAVFLFRFFYLSGGH" gene complement(465656..466405) /locus_tag="Rpic12D_3893" /db_xref="GeneID:8021580" CDS complement(465656..466405) /locus_tag="Rpic12D_3893" /inference="ab initio prediction:Prodigal:1.4" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983822.1" /db_xref="GI:241665463" /db_xref="GeneID:8021580" /translation="MSTSTCGTLRLRVELNRQRLGLKLSSLKPMDEADQLLIGNDVRA VPVSAGKNPYSPTPYSAGCNGSRTRFCVCLRRNRYAAHDNPLAETGSLVFSGRGGATQ KWVRVLIAPIADAPDGGGPYAYLFLRHHAQKWVRKFACNLLAGTVSQKRVRVAPTAQQ AFGRRCTATACAGGWRFRHHARPARGALALGLRALHPSHRMNSISIRDALRPGILPSV MLSRGAHAAEHPCAMPSQPAMALHDKRRQPA" gene 467065..468138 /locus_tag="Rpic12D_3894" /db_xref="GeneID:8021581" CDS 467065..468138 /locus_tag="Rpic12D_3894" /inference="protein motif:PFAM:PF04796" /note="PFAM: plasmid encoded RepA protein; KEGG: rso:RSp0001 RepA replicase protein" /codon_start=1 /transl_table=11 /product="plasmid encoded RepA protein" /protein_id="YP_002983823.1" /db_xref="GI:241665464" /db_xref="InterPro:IPR006881" /db_xref="GeneID:8021581" /translation="MVTKRLTPNGKPEDAAPGRIIVPSGGQVIAAPEKFQRLFDEAQA MEREDAWQSGEVGFLSRASVQVTLPYRAPKGSPPVWTRSSGNISLMIQPGYFTQQRSE RASNGRQRIVSETVSFGYPYGSYPRLMLAWIGKEIMAKKKRGEFQGTVEDRRISLGNS LSEFMYNLGIPMATGGKRGTMTLVRQQMIRLFSATIAIVQNKSAPNQNQNQEPLSIDR IGYLLADQLSTWWDPMQPGQGSMFESFVVLSEPFFNELVNRPVPVDMRALKALKQSPF ALDVYSWLTYRFFTIQKRTEIPWEALQMQFGTETESERKFRALFRKALKDVLVVYPDA KVDADSSKALILQPSRTSVRKLA" gene complement(468215..468418) /locus_tag="Rpic12D_3895" /db_xref="GeneID:8021582" CDS complement(468215..468418) /locus_tag="Rpic12D_3895" /inference="protein motif:PFAM:PF00313" /note="PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: rso:RSp0002 cold shock-like transcription regulator protein" /codon_start=1 /transl_table=11 /product="cold-shock DNA-binding domain protein" /protein_id="YP_002983824.1" /db_xref="GI:241665465" /db_xref="InterPro:IPR002059" /db_xref="InterPro:IPR011129" /db_xref="GeneID:8021582" /translation="MATGTVKWFNETKGFGFITPDGGGADLFAHFSEIQGSGFKTLKD GQKVSFEVKQGPKGLQASGIRPE" gene 468824..469492 /locus_tag="Rpic12D_3896" /db_xref="GeneID:8021583" CDS 468824..469492 /locus_tag="Rpic12D_3896" /inference="protein motif:PFAM:PF01656" /note="PFAM: Cobyrinic acid ac-diamide synthase; KEGG: rso:RSp0003 partition protein" /codon_start=1 /transl_table=11 /product="Cobyrinic acid ac-diamide synthase" /protein_id="YP_002983825.1" /db_xref="GI:241665466" /db_xref="InterPro:IPR002586" /db_xref="GeneID:8021583" /translation="MSAKIVTVFNQKGGCGKTTVSMHIAGTLGLRGNKTLLVDMDEQG TATRWAAQAPDEKPFPASVIGLAPSGGAMHREVRKFVADYDYIVIDCPPAVHSPSSSS ALLISDIAFIPVVPSPPDLWAAVAAKALAQQAQVTNETLRIRVLANMVQRRVSLAKQA IEILGDDGDIPLMESMIGSRSAFRECQAIGATVHGVSGAREAVSEVDIMVDEVLQLLQ EERV" gene 469489..470496 /locus_tag="Rpic12D_3897" /db_xref="GeneID:8021584" CDS 469489..470496 /locus_tag="Rpic12D_3897" /inference="protein motif:TFAM:TIGR00180" /note="KEGG: rso:RSp0004 putative partitioning protein; TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease" /codon_start=1 /transl_table=11 /product="parB-like partition protein" /protein_id="YP_002983826.1" /db_xref="GI:241665467" /db_xref="InterPro:IPR003115" /db_xref="InterPro:IPR004437" /db_xref="GeneID:8021584" /translation="MSGKLKSLKAGMLAGIAAEKTKAAPVDRFALAEQAIVSHPRGLL GQPAAPTFSAESAESANTSERRVIKIPLDRLHENPLNARRIYDPQTVQERAASIATHG QQTPGLAAPHPSKPGWYVLIDGHYRKRALAAAGKAEMDCFVEEGLSDIDFYRLSFVLN EQRSGQSVLDNAIAWRQLLDEGKVKKEEDICEITGVSAGTVNKTLALLKLPDSVLDVM KERPAGIGIATGYELTLYCKSAGEERTRELVHRVLEEGLSSRDVEQIRKIAQEGRTRK VKEVSRQYKIRNSEGDLLGTIKEWDSGRVMLDVKLSDRAARESLVEALKSRFGLDVAL L" gene 470795..471631 /locus_tag="Rpic12D_3898" /db_xref="GeneID:8021585" CDS 470795..471631 /locus_tag="Rpic12D_3898" /inference="similar to AA sequence:KEGG:RS01977" /note="KEGG: rso:RS01977 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983827.1" /db_xref="GI:241665468" /db_xref="GeneID:8021585" /translation="MARPALHFSNEQQQRILEAIRRLDIAFPHDNAVFLDELIDAVHA VTRRIYGARRYSQWLAEAGVTRRPSNMTLQKAVNRAHGRSGRGLGGTPDTVEPWPIPW TAAETGTPVMSSAHASREERDRVASRAIGAPGAGAEWMEARIRAEVAERALEHEAARN RQLQAAMADLERRLGEALATAPAVSPKLTDSTLERIEQTIETVARLEGAASALAGTER FLRLQNDAVRQQTQNEAEQLRQRIRTLEAEVAQLRTQLDAYRRMPERAAPVSRGWVKP AS" gene 471882..472835 /locus_tag="Rpic12D_3899" /db_xref="GeneID:8021586" CDS 471882..472835 /locus_tag="Rpic12D_3899" /inference="protein motif:TFAM:TIGR01099" /note="TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: rso:RSp0006 UTP--glucose-1-phosphate uridylyltransferase UDP-glucose pyrophosphorylase protein" /codon_start=1 /transl_table=11 /product="UTP-glucose-1-phosphate uridylyltransferase" /protein_id="YP_002983828.1" /db_xref="GI:241665469" /db_xref="InterPro:IPR005771" /db_xref="InterPro:IPR005835" /db_xref="GeneID:8021586" /translation="MNEKITKAVFPVAGLGTRFLPATKASPKEMLPIVDKPLIQYAVE EAAAAGITEMIFITGRAKRAIEDHFDKAYELETELAAKNKQALLDMVQSIKPAGVECF YVRQPETLGLGHAVLCAQKLVRDEPFAVILADDLLDHEPPVMQQMTELYDHYRCSIVG VETIAPEATRSYGVVAGREWDDRLVKLDGIVEKPAPSEAPSNLGVVGRYILTPRIFDH LRNLRPGAGGELQLTDAIQSLLAEEQILAYRYRGQRFDCGSKFGYLQATVEFALRHPE VRADFETYLNERLGRAPDQATPLGKSDRRLREDTIALSVAA" gene 473094..474440 /locus_tag="Rpic12D_3900" /db_xref="GeneID:8021587" CDS 473094..474440 /locus_tag="Rpic12D_3900" /inference="protein motif:PFAM:PF00083" /note="PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: rso:RSp0007 putative alpha-ketoglutarate permease transmembrane protein" /codon_start=1 /transl_table=11 /product="General substrate transporter" /protein_id="YP_002983829.1" /db_xref="GI:241665470" /db_xref="InterPro:IPR005828" /db_xref="InterPro:IPR005829" /db_xref="InterPro:IPR007114" /db_xref="InterPro:IPR011701" /db_xref="GeneID:8021587" /translation="MTQPQAGTMPGEFSPAQAPARDRDTPQDVRRRLRSIFSGSIGNL VEWYDWYVYSAFALYFAKSFFPKGDQTAQLLNTAAVFAVGFLARPVGGWLMGIYADRY GRKRALFFSVVLMCLGSLIIALTPSYAAIGVAAPVLLVLARLLQGLSVGGEYGTSATY LSEVANKEHRGFYSSFQYVTLIAGQLTALALLIVLQQFVLSPAQLDAWGWRIPFFVGA LCALVAMRMRSHMEETQSFTAAKENKKRGTLAELAKHPRAVAIVVGLTLGGTVAFYTY SIYMQKFLANTVGLSKSQATLVSGATLLLFALLQPIVGGLSDRIGRRPILIAFGVLGT LLTVPIMTGISHTTNPWSAFFLIMAALVIVSGYTSINAVVKAELFPAEVRALGVGLPY ALTVSIFGGTAEYIALWLKQAGHESLFYWYVTGTIFLSLLVYVFMRDTREHSRIEH" gene 474505..476352 /locus_tag="Rpic12D_3901" /db_xref="GeneID:8021588" CDS 474505..476352 /locus_tag="Rpic12D_3901" /inference="protein motif:PFAM:PF02518" /note="PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rso:RSp0008 C4-dicarboxylate transport sensor kinase transcription regulator protein" /codon_start=1 /transl_table=11 /product="histidine kinase" /protein_id="YP_002983830.1" /db_xref="GI:241665471" /db_xref="InterPro:IPR003594" /db_xref="InterPro:IPR003661" /db_xref="InterPro:IPR004358" /db_xref="InterPro:IPR005467" /db_xref="GeneID:8021588" /translation="MAVALAMAACCAAAGWGAYAIALQRYVAARAEEAGQRTTFYAQS LRSTLARYESLPRLAALEHVLHAALQANHPPGDAVARGAANAYLKEVQAATDLSAAYL LDTTGLTLAASNWDLPSSFVGQNYAFRPYFAEAMREGLGRFYGVGNTTGETGYFLAAP VRDGSRPIGAVVVKINLDAFEATLSRSGDTVLLVDRYGVIFLSSVPALKYRTLGTLSV DQRAALDATRQYAPHTLVPVDPRAGSVPFSADQPPQAVRVALPGKSASVLRVQYRPVG LLGWQVAVLIDPRDEQRTALVAGASASFAMALAFAVLVALRLRTRRREEQRRARAALR EVQRDLEARIAQRTAELTSANTALASKVEALDAAQRILRETRDAAVQAGKLAVLGQMA AGITHELNQPLTALTTLSDNANQLAERGRIDEVRGNLTHISQLANRMGRIVSHIKAFS RKGDAARAAVSVDEAIRQALMLVETRRRQVGVTVTAPSVPADLAVWANAVRLEQVLVN LIRNAIDASAETPQPRSATVHVSVEPVEKWVRITVRDFGPGIPADVLPRLFEPFFTTK VDGQGLGLGLAISLAIIEDFGGRLEGRNADDEGGGAAFIIELERAVNPA" sig_peptide 474505..474567 /locus_tag="Rpic12D_3901" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.992) with cleavage site probability 0.517 at residue 21" gene 476349..477707 /locus_tag="Rpic12D_3902" /db_xref="GeneID:8021589" CDS 476349..477707 /locus_tag="Rpic12D_3902" /inference="protein motif:PFAM:PF00158" /note="PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase; KEGG: rso:RSp0009 response regulator of the C4-dicarboxylate transport two-component regulatory system transcription regulator protein" /codon_start=1 /transl_table=11 /product="two component, sigma54 specific, transcriptional regulator, Fis family" /protein_id="YP_002983831.1" /db_xref="GI:241665472" /db_xref="InterPro:IPR001261" /db_xref="InterPro:IPR001789" /db_xref="InterPro:IPR002078" /db_xref="InterPro:IPR002197" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR011704" /db_xref="GeneID:8021589" /translation="MTEHATPDMSSIDHAPVFLIEDDDVVRLGCEQALALADVPVQSF ADAESALAALAAQTPAVVVTDVRLPGRDGLAVLREMLQHDRQLPVILITGHGDVTMAV AAMRAGAYDFMEKPFHSERLVDVVRRALEKRRLTAENLRLREALQGRQAYPLIGQSAA MQNVRRLVAALAPTDADILVTGETGSGKEVLARAIHEGSRRRGPFVALNCAALPESVF ESEMFGHEAGAFTGANRRRIGKMEYANGGTLFLDEIESMPLALQAKLLRALQERSIER LGSNASVPIDCRVVAAAKVDLKEASDRGAFRADLYYRLNVVSIALPPLRQRAEDIPLL MAYFLQQAAVRYDRPVPDWSAQDMMRWQHHDWPGNVRELKNVAERFCLGLDDGLMASE ASQHSLAGRMMAVERATIEEALRATEGNVARTADLLAVPRKTLYDKLNRHGIEPDRFR SS" gene complement(477704..478504) /locus_tag="Rpic12D_3903" /db_xref="GeneID:8021590" CDS complement(477704..478504) /locus_tag="Rpic12D_3903" /inference="similar to AA sequence:KEGG:RS01982" /note="KEGG: rso:RS01982 putative lipoprotein transmembrane" /codon_start=1 /transl_table=11 /product="putative lipoprotein transmembrane" /protein_id="YP_002983832.1" /db_xref="GI:241665473" /db_xref="GeneID:8021590" /translation="MPSVPPLALAAHALAALLIAGVPIGAWLWLRRRFDLAWRDIGVG AGVFVLFALILERTLHVYLLRLNPVTAQWLRVPALFIIYGALMAGLFEECGRWLGLRH LTRTPSDAATPVAYALGHAGAEAWLVGAASQAQMVMFGVAANQGQLDARLAASGAQSM SGAIHAMLAQLSPWLAAGAVVERIAAMLIQFTLTLLVWHAVRQRRLLPVILAVLLHAV ADLPAALYQVHVMPLAVTESVYAVIAVLLAATCWPPQGGRRVGESSLR" sig_peptide complement(477704..477781) /locus_tag="Rpic12D_3903" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.683) with cleavage site probability 0.569 at residue 26" gene 478617..479057 /locus_tag="Rpic12D_3904" /db_xref="GeneID:8021591" CDS 478617..479057 /locus_tag="Rpic12D_3904" /inference="similar to AA sequence:KEGG:RS01983" /note="KEGG: rso:RS01983 putative signal peptide protein" /codon_start=1 /transl_table=11 /product="putative signal peptide protein" /protein_id="YP_002983833.1" /db_xref="GI:241665474" /db_xref="GeneID:8021591" /translation="MAGQTVVKRMMWRWIWVCGFSMGILGVMTSAHAARWHEYLKTTS VSASIERGSLRSSRAGHKTFLARTVLKRGERRAHGTRYRPGTMILSRQEIDCRRQRIR LVDYVVRGPDGATLDTDTAAGAHWMRIRPGTLAARSAAYVCARR" sig_peptide 478617..478718 /locus_tag="Rpic12D_3904" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.992) with cleavage site probability 0.989 at residue 34" gene 479170..481851 /locus_tag="Rpic12D_3905" /db_xref="GeneID:8021592" CDS 479170..481851 /locus_tag="Rpic12D_3905" /inference="protein motif:TFAM:TIGR00254" /note="KEGG: rso:RS01984 hypothetical protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase HAMP region domain protein; SMART: GGDEF domain containing protein; histidine kinase HAMP region domain protein; PAS domain containing protein" /codon_start=1 /transl_table=11 /product="diguanylate cyclase with PAS/PAC sensor" /protein_id="YP_002983834.1" /db_xref="GI:241665475" /db_xref="InterPro:IPR000014" /db_xref="InterPro:IPR000160" /db_xref="InterPro:IPR000700" /db_xref="InterPro:IPR003660" /db_xref="InterPro:IPR013655" /db_xref="InterPro:IPR013656" /db_xref="InterPro:IPR013767" /db_xref="GeneID:8021592" /translation="MKPTLKSQAAIMATVISVTLVSLFGWSQREPIRREMMAQIQAQQ TALVRESADDLRQRLDIYLGVLERTARQMHTVRFDTPEQEATLFRSIRPASGLFDGVF LATSAGKVTATSAHRPGVVGLDITDRDYFKQIMVRGQPTISAPLRNRIGGEPIVIMAA PVHDNDGRLVGLIGAALYLLKPNFLGLLRDMRIGKTGHVYLITQGQHPIFVVHPDPDK VLAPLDADPAVAAALRSDPSASPERGGDVVTMQDVVATGWTLGAVLPGAEANRQLFAM HQRFRLSLVLLAVLIGASVWAAMLWLLRPLARLHAAMSQLSTTDLRDAPPLELPDASA EIDAVSTAFRKLMDEVARQRAELEAVNDASPLGLFRADVEGRIVYANEAYRRLLGLTH EEALADVWLTRQHPNDREAAMTGWHEAIRRGTVYTAEQRVLVPGEGERLMVVNTAPVR VDGEVIGHVGTMEDITVRARAQQASRVLTKILDSTTDFVAQTDVHGNVTYMNPAGRRF VGIALDQDIRGMTVADFYPPATMDWLREVAVPAAVRDGVWIGETTVRGQQRVAVPVNH MLIAHRDPAGHMEYFSSIMRDITQDRAAKEALQRSRETLQTVTDAMPALVAFIDVDER FRFLNAAYEKAYGQPTAAMLGKTVCEVAGDESYRSVRDALHRALAGETIVFEREQRNR EAYRCEEINYLPQFDAHGRVAGVHSVTLDITERKKQELRLRALTTTDHLTGLLNRAGF EARLSAALDQGRVSDTAGALLLIDLDGFKAVNDTYGHTMGDALLRTVAQRLVRAVRPS DGVARFGGDEFAVILENLSQPDDAKAVAASILGVCNRPFRLGERAVQVGVSIGIAGFD ARTLAQGVVFEAADEALYEAKSRGKGLFVSADELPTG" sig_peptide 479170..479253 /locus_tag="Rpic12D_3905" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.918) with cleavage site probability 0.691 at residue 28" gene 482286..483446 /locus_tag="Rpic12D_3906" /db_xref="GeneID:8021593" CDS 482286..483446 /locus_tag="Rpic12D_3906" /inference="protein motif:PFAM:PF01094" /note="PFAM: Extracellular ligand-binding receptor; KEGG: rso:RS01985 amino acid-binding periplasmic (PBP) ABC transporter protein" /codon_start=1 /transl_table=11 /product="Extracellular ligand-binding receptor" /protein_id="YP_002983835.1" /db_xref="GI:241665476" /db_xref="InterPro:IPR000709" /db_xref="InterPro:IPR001828" /db_xref="GeneID:8021593" /translation="MQKTIKRLLVTAAAAGAAIATGTTFAAQDIKIGVAEALSGGAAQ YGVAIRNGFQLAADEINAAGGINGSKIALVIEDEQGKKEEAINVFKKLIFQDKVAMVF GPTLSNSAQAADPIAQGAKTVVFGTSNTADGVTSIGDFVFRNSVTEADVLPATIQTVV KKAGVKKVAVLYGNDDVFTKSGYDNFKKALEDLKIPVTTTETFAKGDVDFKAQLTKIK ATNPDAIVLSALIAEGGPIMVQARQLGLNVPIIGGNGMNSVKVFDLAKDKSDNLWVGS PWSIENHTAENSKFITAYTAKYKAAPDQFAAQAYDAMYIASKALKTVKFSGKLEADRK AIRDALPGVKHIGATGAFAFRQVTARGKPAGYDAVQTPIVSVTKNGKYTIEK" sig_peptide 482286..482366 /locus_tag="Rpic12D_3906" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.997 at residue 27" gene 483543..484424 /locus_tag="Rpic12D_3907" /db_xref="GeneID:8021594" CDS 483543..484424 /locus_tag="Rpic12D_3907" /inference="protein motif:PFAM:PF02653" /note="PFAM: inner-membrane translocator; KEGG: rso:RS01986 amino-acid transmembrane lipoprotein ABC transporter" /codon_start=1 /transl_table=11 /product="inner-membrane translocator" /protein_id="YP_002983836.1" /db_xref="GI:241665477" /db_xref="InterPro:IPR001851" /db_xref="GeneID:8021594" /translation="MLEQQLVNALSLGCVYALFALGFTLVFGILGVINLSHGAVFMLG AYAALQVVTHFELPLWAALAVGFVVSGVAGLIIDVLLLRPLRRRNAPHLIPMIGTIGA GIAINNAMQGVFGAENLRFPAGLVSDASLDLGGIHLMPLELGIIVLSFALMAGLMLLL KRTQLGRALRAIAESPKAAALLGINVEGLFLLTSFAAAALGGLSGVLIGLYSNAVFPL MGQPMLHKGIAVIILGGLGDIRGAMLGGLFLGFAEVLSVAYIGSTMRDAVAFGLLFLI LLVRPQGLFGKVLERKA" gene 484438..485346 /locus_tag="Rpic12D_3908" /db_xref="GeneID:8021595" CDS 484438..485346 /locus_tag="Rpic12D_3908" /inference="protein motif:PFAM:PF02653" /note="PFAM: inner-membrane translocator; KEGG: rso:RS01987 amino-acid transmembrane ABC transporter protein" /codon_start=1 /transl_table=11 /product="inner-membrane translocator" /protein_id="YP_002983837.1" /db_xref="GI:241665478" /db_xref="InterPro:IPR001851" /db_xref="GeneID:8021595" /translation="MEWFDNFWSVYSNLVLTLGINALLALSIYLTLSCGLLAMANAAF MGIGAYTAALLTMNAEMPFSVALLGGMVAPAVVAVVIGRPTLRLSGVYLAMATLGFGE VVRVLILNTEDWTGGALGLNGIPQLTEWWHVALAVALTMFVLARMRRSKVGRAFEAIK EDETAAGLMGINVAGTKLLAFTLGAVIAGLAGALNAHLTFFIGPNEFGFDRGVEILTM TILGGTNGLTGPVLGSLILSLLPELLRAFKDFRLVVNGVILMVIVLFLPKGIWDPARF ARWFGIKRGGTMPGTGNTPAASNESH" gene 485354..486151 /locus_tag="Rpic12D_3909" /db_xref="GeneID:8021596" CDS 485354..486151 /locus_tag="Rpic12D_3909" /inference="protein motif:PFAM:PF00005" /note="PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rso:RS01988 amino-acid ATP-binding ABC transporter protein" /codon_start=1 /transl_table=11 /product="ABC transporter related" /protein_id="YP_002983838.1" /db_xref="GI:241665479" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR017871" /db_xref="GeneID:8021596" /translation="MLKLTSISKRFGGLSVLQDVNIEVPQGTIFGLIGPNGAGKTTVF NLITGLLAPTGGSLTFNGENLVGKKPHQITQMGIARTFQNIRIFKEMTLLENVVVGMH RHLDYGAPGLLLSLPKYRAAERRARDRALELLSWVKLDHKAHDIADNLSYGDQRKLEL ARALATEPKLLLLDEPVAGMNTGEKVDLMAEIENIKARGYTIFMIEHDMRFVMGLCER IAVLNFGRIIAEGPPEAIRNNPQVIEAYLGRDDDEADGSAAAEKETA" gene 486148..486873 /locus_tag="Rpic12D_3910" /db_xref="GeneID:8021597" CDS 486148..486873 /locus_tag="Rpic12D_3910" /inference="protein motif:PFAM:PF00005" /note="PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rso:RS01989 amino-acid ATP-binding ABC transporter protein" /codon_start=1 /transl_table=11 /product="ABC transporter related" /protein_id="YP_002983839.1" /db_xref="GI:241665480" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR017871" /db_xref="GeneID:8021597" /translation="MTTLLEVKGLQVSYGHIAAVKGIDFALKAGEITSLVGANGAGKS TTLLALSGLIPKSQGDVRGQILFEGDDVSQWSAHKRVERGIVQVAEGRATLTTMTVRE NLELGAYTRKDRSQIASDLERVFHLFPRLKERIDGMAGNLSGGEQQMLAIGRALMARP RVLLLDEPSMGLAPIIVQEIFRILRTINAEGLTIFLVEQNVRQALKIAQHGYVLETGQ IVLADSGRNLLGNPRVLEAYLGG" gene complement(486947..487843) /locus_tag="Rpic12D_3911" /db_xref="GeneID:8021598" CDS complement(486947..487843) /locus_tag="Rpic12D_3911" /inference="protein motif:PFAM:PF03466" /note="PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rso:RS01990 transcriptional regulator transcription regulator protein" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LysR family" /protein_id="YP_002983840.1" /db_xref="GI:241665481" /db_xref="InterPro:IPR000847" /db_xref="InterPro:IPR005119" /db_xref="GeneID:8021598" /translation="MTADPSTSLQWDDVRYFLVLAREGSLSAAARRLGVEHTTVARRA DALEQSLGVRLFDRLPRGWRLTAEGSALAERAERMEQEAASFARAAAGAGSLRGTVRI SAPPTVASHVIAPNLTLLRKQWPGIDLVLLGEKRNANLMAHEADLAVRLSRPTASTLA ARPLGSLGYGLYATPEVLAQPEAQWQFIGYDERLRHVPQQRWLDDYAGARRVVLRCSD LSAMHQAALAGVGVAALPHLLGAPAETGTLLRRVPVDDPALHREIWLAIHPDVRRSPR VRAVADALIALFDAQRHVLAGH" gene 488019..489017 /locus_tag="Rpic12D_3912" /db_xref="GeneID:8021599" CDS 488019..489017 /locus_tag="Rpic12D_3912" /inference="protein motif:PFAM:PF00107" /note="PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bac:BamMC406_4513 alcohol dehydrogenase" /codon_start=1 /transl_table=11 /product="Alcohol dehydrogenase zinc-binding domain protein" /protein_id="YP_002983841.1" /db_xref="GI:241665482" /db_xref="InterPro:IPR002364" /db_xref="InterPro:IPR013149" /db_xref="InterPro:IPR013154" /db_xref="GeneID:8021599" /translation="MHARLIQLGEPGPALGLQPADQMLPPPGANVLTVRHTAVGVNFV DVYHRTGLYPVPAFPAVLGVEGVGVVEAVGTDVRGFVVGQRVAWAGLMDGAPGGYASH RNIPANRAIALPDALDDETVAATLLRGITAHMLLTRVRQVGVGDTVLVHAAAGGLGVL LVQWAKRLGARVIGTVGSEAKAATALGHGADHVVLHRQQDVREAVLQLTAGEGVDYVI DGVGGPMLQTSLAVTRPFGMVASIGQAGDVSNVQTSAVDLAALGPSRSIALARPGVFR YMTDLSRYRVGAQAALQRMLEGVRVPVGGIYALADAAAAHAALEGGRTSGALLLRP" gene 489113..489430 /locus_tag="Rpic12D_3913" /db_xref="GeneID:8021600" CDS 489113..489430 /locus_tag="Rpic12D_3913" /inference="protein motif:PFAM:PF03795" /note="PFAM: YCII-related; KEGG: rso:RS01991 hypothetical protein" /codon_start=1 /transl_table=11 /product="YCII-related" /protein_id="YP_002983842.1" /db_xref="GI:241665483" /db_xref="InterPro:IPR005545" /db_xref="GeneID:8021600" /translation="MLYLILFTYRAPLSEMERVLPAHRAHLDAHYASGHFLMSGPFFP REGGGILAQAGSRDEIDAIVMRDPFVLENLVEVRLIAWGPNRRSADVPQAWLPDATVA MPT" gene 489483..490877 /locus_tag="Rpic12D_3914" /db_xref="GeneID:8021601" CDS 489483..490877 /locus_tag="Rpic12D_3914" /inference="protein motif:PFAM:PF00654" /note="PFAM: Chloride channel core; KEGG: rso:RS01992 putative voltage-gated ClC-type chloride channel ClcB" /codon_start=1 /transl_table=11 /product="Chloride channel core" /protein_id="YP_002983843.1" /db_xref="GI:241665484" /db_xref="InterPro:IPR001807" /db_xref="InterPro:IPR014743" /db_xref="GeneID:8021601" /translation="MTDTPPPSPPPLPRPAWWQRVAARLPFGRVHLVFVFAGLIGCAG AFSTILFRECLRQLQWWISGTDQGLVATARALPWWARLLVPTVGGILAGLTLQFGLKW IPRKGSEDYMEAIAVGDGVLSARQSLVRSASSLCSVASGASIGREGPMVQLSAMCGSL LGRALRRVMPVSVEQLRLLVACGAAAGITSAYNAPIAGAVFVCEIVFGVITTATLGPL LVAAVTADIVLRQFFGYGAVYEMPHFDFVSGWEVLTYLGLGLAAGMAGPLLLGLIDRA RDAFSRTKLPLTLRLAVGGLIVGVLSTRVPEVWGNGYSVVNGFLHEPWLWQTVALVLI CKVAATAASAGSGAVGGVFTPTLFCGAALGLLYGTGMHALLPGAAPVPISYAVVGMGA LLAATTHAPLMSILMIFEMTLSYQVVLPLMLACITGYVTAHATGAPSVYARALARNRD DAQHLPSASEATQK" gene 491147..493375 /locus_tag="Rpic12D_3915" /db_xref="GeneID:8021602" CDS 491147..493375 /locus_tag="Rpic12D_3915" /inference="protein motif:TFAM:TIGR01783" /note="TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: reu:Reut_A2876 TonB-dependent siderophore receptor" /codon_start=1 /transl_table=11 /product="TonB-dependent siderophore receptor" /protein_id="YP_002983844.1" /db_xref="GI:241665485" /db_xref="InterPro:IPR000531" /db_xref="InterPro:IPR010105" /db_xref="InterPro:IPR012910" /db_xref="GeneID:8021602" /translation="MNRRTPVASALLALFATPPVALAQQAPSSPIAATTTLPEAVVRA TAPRDDYNAAKSSISKLPENLRDVPQSVTVVPKALTDAQGGSSLADALRNVPGITIGA AEGGQIGNNINLNGFSARTDIYLDGFRDRGQYYRDLFALDSVEVLMGPSSMLFGRGST GGVINQVTKKPKLKAATEITGSVTTNGLVRATADVNTPTSDTSAFRIAAMAQNGKTST RDEMTAQDFGIAPSWRFGIGTPTEVTLSALLQHNRDMPDYGVPNLNGHPVNVSPKTYY GYTDDRTTQDVASFSANIDHKFSPNLRLRNQTQFNYVQTDARETAPNAVGTVNSSGVF TALTNSNLPLSALSVRLQSHDRRIRDYSLFNQTELTAKFDTGSVKHTLLVGTEFGHDG YDNQNYYRNGSCNGTPLAQSSMTSGFVSCEPLVSPSYTTSPASTPSSLGNLQGGSANT VAAYFNDSIEFTKQWKAVAGLRYDRYVASISNSLNSANTPASAKITALPYAQQSVNFV STRLGGIWQPTDWQSYYVSYGTSFNPSLEQLVGTTGQQGLDPEKNKSYEAGGKWDLLN GDLSVSSALFQITKDNARTQIDSTTYTSAGKIRVRGARLGATGHVTDKLQIFAGYTYL DAQIVNGIAAGTQGMTPANTPKHSATVWTSYAFVPNWEVGAGAFYMSQRYANNTNTVQ TGGFVRWDAMLAYHQPKYDVRLNLFNVFNKTYYDALIPSDGGRAVPGTGRAAMLSVVY RM" sig_peptide 491147..491218 /locus_tag="Rpic12D_3915" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.997 at residue 24" gene 493424..494110 /locus_tag="Rpic12D_3916" /db_xref="GeneID:8021603" CDS 493424..494110 /locus_tag="Rpic12D_3916" /inference="protein motif:PFAM:PF03171" /note="PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; KEGG: reu:Reut_A2877 putative hydroxylase" /codon_start=1 /transl_table=11 /product="2OG-Fe(II) oxygenase" /protein_id="YP_002983845.1" /db_xref="GI:241665486" /db_xref="InterPro:IPR005123" /db_xref="InterPro:IPR006620" /db_xref="GeneID:8021603" /translation="MLVCIPNVFTAAQVAALRDLLDSAGDAWVDGRVSAGYSGAPVKV NQQIDEGAEVALQCQQLILSVLERHPRFISAALPNVVYPPMFNRYGEGMTFGAHVDGS VRIHPHNGTKLRTDISATLFLSDPASYDGGELQIEDTYGMHSVKLNAGDLVIYPATSL HQVTPITRGVRVASFFWIQSLIRDDAQRAMLFDLDNAIQMLNQTDADATARRTLIGVY HNLMRQWSET" gene complement(494171..494317) /locus_tag="Rpic12D_3917" /db_xref="GeneID:8021604" CDS complement(494171..494317) /locus_tag="Rpic12D_3917" /inference="similar to AA sequence:KEGG:RS01993" /note="KEGG: rso:RS01993 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983846.1" /db_xref="GI:241665487" /db_xref="GeneID:8021604" /translation="MNTVALQAAPASRLARFWQILRREASRAVALHVESCGMMAELYR RSGH" gene complement(494442..496970) /locus_tag="Rpic12D_3918" /db_xref="GeneID:8021605" CDS complement(494442..496970) /locus_tag="Rpic12D_3918" /EC_number="2.7.9.2" /inference="protein motif:PRIAM:2.7.9.2" /note="PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; KEGG: nmu:Nmul_A1613 pyruvate, water dikinase" /codon_start=1 /transl_table=11 /product="Pyruvate, water dikinase" /protein_id="YP_002983847.1" /db_xref="GI:241665488" /db_xref="InterPro:IPR002192" /db_xref="InterPro:IPR008279" /db_xref="GeneID:8021605" /translation="MHKLVLDWTDAAAAGAAVAGGKGWQLGRMATLGVPVPEGFVLAA QASHGRAYGDAVPPAVLDVLTRALADRGWQDTPLAVRSSAPQEDASQHSFAGIHETRL NVIGTHALAQAVQAVWDSAHAPHALAYRERFGIDAADREMAVVIMPLLLTVAAGIAFT SDPLSGRDDHIVINAHWGLGEALVGGQADGDTFRIEVSAESDSLHVIERRIGQKTRMT RTLAEGGTSLCDTAAQDVRRAVLDDAQLIALATLAHDTASALDFAQPRYDIEWVWDGQ RFWIVQARPITTRGRHVYAALQDQPTFWTRGNTREVFPAPLSPIDWTLYGHAANRMLT LAYALAGYPLMPGLDRTALFRGRLYLNVSLMQWEAFDAFGIAPAAINRMLGGSQPEIS VPRITWPQRAARAARLARYLLNAGSARRQAQRDLNRARQEAAQWRDGEWPDNAVELAG CLHARFMTARRADSLFFLQGSAGGAVSGLVDFIDKQCHGEGHALTAALMAGAEPSVTA QQSYDLMALAQTAAADTEALAWLRADTRTGTLWAQQLPAHSPFRQQFGAFLERYGHRA IEESYFRHARWREQPDYLLDLIAGLVGSHAQTVRQRQQVAASRAWQRVPFWMRPVVRA MLKGAVRDSNQREAARSALVAYLEALRIGLLRLAEKLCPAGALDQSEDIFNLTLDECL RAAQGTLAPRFVAQRARDRRQLLSRWATESEADIVSEHDEAPIAPALPVATGADVWTG TAVGAGAAQGRTRLVDHAAAGTALQAGDILVAPSTDPAWTPLFLKAGALVMETGGYLS HGAIVAREFGIPAVVNVPGIRAQLKDGETIRVDGNAGTISRVAA" gene complement(496970..497599) /locus_tag="Rpic12D_3919" /db_xref="GeneID:8021606" CDS complement(496970..497599) /locus_tag="Rpic12D_3919" /inference="protein motif:PFAM:PF00440" /note="PFAM: regulatory protein TetR; KEGG: bcm:Bcenmc03_3801 TetR family transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, TetR family" /protein_id="YP_002983848.1" /db_xref="GI:241665489" /db_xref="InterPro:IPR001647" /db_xref="GeneID:8021606" /translation="MPSSPMPIETGRRERKRSQTLDHLAATAFALFEAHGYDAVTMEQ IAAQADVSKGTLYNHFPVKEALLAHQFHAELAAGGMQLRAQIEAQPDFASRMAVLLSA SADWCQARRPYLAAYFRYRFASADLASRNRDADKRSGLEAVFAMLIDAGQRSGELDAQ LDAEHLAGLFEYLYLGALMRWLARPDTDLHEGFSVIIDLFLRGIGRTEA" gene 497719..498672 /locus_tag="Rpic12D_3920" /db_xref="GeneID:8021607" CDS 497719..498672 /locus_tag="Rpic12D_3920" /EC_number="3.4.11.5" /inference="protein motif:TFAM:TIGR01249" /note="KEGG: reh:H16_B2515 prolyl aminopeptidase; TIGRFAM: proline iminopeptidase; PFAM: alpha/beta hydrolase fold" /codon_start=1 /transl_table=11 /product="proline iminopeptidase" /protein_id="YP_002983849.1" /db_xref="GI:241665490" /db_xref="InterPro:IPR000073" /db_xref="InterPro:IPR002410" /db_xref="InterPro:IPR003089" /db_xref="InterPro:IPR005944" /db_xref="GeneID:8021607" /translation="MSELRTLYPPIEPYETGMLDVGDGHTIYYERVGTPGAKPAVFLH GGPGGGISPDHRRVFDPARYDVMLFDQRGCGRSTPYAGLEANTTWHLVADIERLRAMV GAERWLVFGGSWGSTLALAYAQKSPERVSELVLRGVYTVTQAELRWYYQYGVSEMFPE KWARFQAPIPEAERGDMIAAYRKVLTGEDRARQIEAARAWSVWEGETITLLPDPGNSA KHADDHFALAFARLENHYFTHQCWLEEGQLLREAQRLAGIPGVIVHGRYDMPCPVRYA YALHQAWPDADFYLIEGAGHAWTEPGILDQLVAATDRFADR" gene 498727..501153 /locus_tag="Rpic12D_3921" /db_xref="GeneID:8021608" CDS 498727..501153 /locus_tag="Rpic12D_3921" /EC_number="2.7.13.3" /inference="protein motif:PRIAM:2.7.13.3" /note="KEGG: bcj:BCAM2757 two-component regulatory system, sensor kinase protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; extracellular solute-binding protein family 3; Hpt domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; extracellular solute-binding protein family 3; histidine kinase A domain protein" /codon_start=1 /transl_table=11 /product="Hpt sensor hybrid histidine kinase" /protein_id="YP_002983850.1" /db_xref="GI:241665491" /db_xref="InterPro:IPR001638" /db_xref="InterPro:IPR001789" /db_xref="InterPro:IPR003594" /db_xref="InterPro:IPR003661" /db_xref="InterPro:IPR004358" /db_xref="InterPro:IPR005467" /db_xref="InterPro:IPR008207" /db_xref="GeneID:8021608" /translation="MKGIVAAYALVASVLLCLMPGAGQAASASAFTAEERAWIAAHPV VRTCVDAHWRPFEFVEDGKIVGIVPSFLDAVSDISGLQFEYVDGACWHGSVEALKSGR IDMSPDWSSDEDTARYRQGFIASTPYFVGTISIVTAERENLFGGSQQLAGKRVAIKGG GGLELAMRHNGVPVTLLTFQDESDALEAVAAGKADAALGTDASILPQLQRQFKGRLFL SGSIWDSPYALTMVTRKDNPVLASILDKSLTAISASDADAIRHRWLETTDYGAPSLAS ILHYRWRQVVAMSAVLLAFAVLAYVLWRARVAAVRSERDKAMFVAFISHEIRTPMHTI LSSLELLQRSQLNGQQASRAVAAISASETLLALLDDVLEYSRLESRSVKLAPQPTAIG PWAQQSIDMVRWRSDEKKLALSLDLACAPDLFIDIDSMRVRQIVLNLLVNAIKFTASG SVVLRVDYLPAKRRGGGTLVLEVRDTGIGIPPERQRKVFEPYERVEGLGHRGASGSGL GLSICRELVNLMRGVITVSSNPEIGTVFTVMLPVREPQADARPEGVAAAPWPQARARA TKQPSPLPIEGPLILVVDDHEAVQHAIQHQLDALGCRTAIAVTGEAALEQFRPSAFDM VLLDCDLPGIDGYTVAQRMRNMEQQQGQRTPIIAISASTDDTHRVRCFDSGMDGVLAK PLRLAALREMIDLWCAHGNAVPSATPSSEAVASAALLAIYQESMTADLKSLAHGVMTR DIAQARHAAHRIAGAAAVVDRLRTRDLAAELERRLSAPSGEVTPDVHALLAELQSAHA ADMLDHSRQP" sig_peptide 498727..498804 /locus_tag="Rpic12D_3921" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.753 at residue 26" gene 501595..502182 /locus_tag="Rpic12D_3922" /db_xref="GeneID:8021609" CDS 501595..502182 /locus_tag="Rpic12D_3922" /inference="protein motif:PFAM:PF00419" /note="PFAM: Fimbrial protein; KEGG: pfl:PFL_3922 type I pilus biogenesis protein" /codon_start=1 /transl_table=11 /product="Fimbrial protein" /protein_id="YP_002983851.1" /db_xref="GI:241665492" /db_xref="InterPro:IPR014779" /db_xref="GeneID:8021609" /translation="MKAKLFLAGVAMSTLSAAAMAQTTPTSVDGVINFQGTILSDTCK VSSLTGDAGTINVDMGTIAADDIGTLTAPKSLANGAGSANIDVVCKTGAKVSMKFAGK TAELSADKKTLRVNNGNTGAGFAQGVSIAVYEGTGAGANAFDLSGGNLLAQTTVPSTG GAVNVRFAAAYVAADPTKIKPGIANASLPFTLTYE" sig_peptide 501595..501660 /locus_tag="Rpic12D_3922" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.996 at residue 22" gene 502267..503010 /locus_tag="Rpic12D_3923" /db_xref="GeneID:8021610" CDS 502267..503010 /locus_tag="Rpic12D_3923" /inference="protein motif:PFAM:PF00345" /note="PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: pfo:Pfl01_3043 pili assembly chaperone" /codon_start=1 /transl_table=11 /product="Pili assembly chaperone, N-terminal" /protein_id="YP_002983852.1" /db_xref="GI:241665493" /db_xref="InterPro:IPR001829" /db_xref="InterPro:IPR016147" /db_xref="InterPro:IPR016148" /db_xref="GeneID:8021610" /translation="MKAKRCAAGAALACALAASASHASISLSTTRLIFDGKNKETSVV VNNDGADALIQAWLDPLDEGANSQLPFAITPPLAKVAAKQQQLLRVLYEGVGMPTDRE SAFWLNVQEVPQTAHNDNVLQLAVRQRIKVFYRPAGLNADPQKAPASLQWQLNQDGGK AMLRLSNPSLYHVTVVDAKVHGGSAEESVIDAKMVAPNSTVTLPVKLPTNAAAPELRY DVINDYGGRQSYRVTLHGSQPSTPVSTGN" sig_peptide 502267..502338 /locus_tag="Rpic12D_3923" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.991 at residue 24" gene 503094..505721 /locus_tag="Rpic12D_3924" /db_xref="GeneID:8021611" CDS 503094..505721 /locus_tag="Rpic12D_3924" /inference="protein motif:PFAM:PF00577" /note="PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: pfo:Pfl01_3044 fimbrial biogenesis outer membrane usher protein" /codon_start=1 /transl_table=11 /product="fimbrial biogenesis outer membrane usher protein" /protein_id="YP_002983853.1" /db_xref="GI:241665494" /db_xref="InterPro:IPR000015" /db_xref="GeneID:8021611" /translation="MTAPRFTKLEASIAMSTCQTTQAFSRKTNGKAVAARPSATPLYL AVCLAMMNTARAAEGETLVAQVDPTLLAYNTSFLQGQGRPADLSAVLSSGSSVPPGTY RVEVQVNGNLVGRRDIDFYQDSDKAKLRPCLTAKMLQDFGVSLSSITPPLDINSHACL DLPHVLDQASADFDAGRLQLNLSIPQAFLSRAARGYVDPALWDEGVTAGYVNYQFSGN YGHSGTGNDSSSYFIGLQNGVNIGRWRLRNESTVSGSNSGQTRFKSNRTLVQRDVDAI KGQLTLGEQYSDATLFDSVRFRGVQIGSDDAMLPDSERGYAPVVRGQAATNAVVEVRQ SGYVLYRANVPPGPFQLTDIFPSGSNGDLEITVIEADGTRRVTHQAFSSLPLMLRKGR LKYNFAAGKYDGDQGPSPNLLSGSLVYGLTDNSTVAGGLQVSKDFQAVNVGVGTNTPI GALSVDLTQSSSRVRGERDTGQSVRILYAKTFTSTNTNFTLAAYRYSTSGYRTFNDHV NDLSNNAGNAWFNATGFQAGRSRSRIDLTTSQDLGGIERQYGSVYLNVSQQTFWNQPG SSRSISLGYGNNWKQLSYNLSLSQTNDTRFSGSGNSTQVMLTMSIPLGSKLHSPRAYT NISNTNNGGTTVQSGLSGFVNDNTSYAMQAGYTGSGRGATGGASLTRDTDMGQLNANV NVARDYQSASVGATGSVVVHRGGVNLGRTVGDTFALMKVEGIKGVDMKTDAGVSVGRN GYAVITYAQPYRLNALSPDTHNLGADVELEDTVKQVVPRRGAIVQATFKGYSGQRAQF AFQQPDGKPVPFGASVEEAPTGRHLGITDPNGNAFVLLRQEQGTLTVKWKDNQCQAPY ALGQAEPGRNYRKQTLRCR" sig_peptide 503094..503264 /locus_tag="Rpic12D_3924" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.830) with cleavage site probability 0.793 at residue 57" gene 506312..506758 /locus_tag="Rpic12D_3925" /db_xref="GeneID:8021612" CDS 506312..506758 /locus_tag="Rpic12D_3925" /inference="ab initio prediction:Prodigal:1.4" /note="KEGG: rme:Rmet_4253 fimbrial protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983854.1" /db_xref="GI:241665495" /db_xref="GeneID:8021612" /translation="MLAGIYSFGTAKINLKIVKVGAIEPGATVPQSILGYMIAANEID HFTIKAGNETSVTTRSCKTPDVTVNLGDQNEVRRFKGVGTLLSLVNSSIALQACPEGI NKVSYQLNLNTDIVDAARSMAAQPPRKWGLRLRDNVSSPVALKTTL" gene 507072..507452 /locus_tag="Rpic12D_3926" /db_xref="GeneID:8021613" CDS 507072..507452 /locus_tag="Rpic12D_3926" /inference="ab initio prediction:Prodigal:1.4" /note="KEGG: pfo:Pfl01_3037 fimbrial protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983855.1" /db_xref="GI:241665496" /db_xref="GeneID:8021613" /translation="MCVARVIRLLFVRAVVWLPVGLVICFTTHAHAVTCSFKPGNSGK TMQFTIPYNLTVPRDAPVGTVVWESAPMNVPTGHSWKCSTSFKAGTINWVGGAASADQ KTDEPIGTTGLAWSELAPAKRIPC" sig_peptide 507072..507164 /locus_tag="Rpic12D_3926" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.889) with cleavage site probability 0.471 at residue 31" gene 507480..507776 /locus_tag="Rpic12D_3927" /db_xref="GeneID:8021614" CDS 507480..507776 /locus_tag="Rpic12D_3927" /inference="protein motif:PFAM:PF01527" /note="PFAM: transposase IS3/IS911 family protein; KEGG: rme:Rmet_6073 transposase IS3/IS911" /codon_start=1 /transl_table=11 /product="transposase IS3/IS911 family protein" /protein_id="YP_002983856.1" /db_xref="GI:241665497" /db_xref="InterPro:IPR002514" /db_xref="GeneID:8021614" /translation="MTSKTKRAQYTLEFKLEAVRLVKSGQSMAVVSATLGIRAQTLHN WVKAEREGKLTGAGMKPVSPEQMELARLRAEVARLKMERDILKKAAAYFAKESV" gene 507773..508666 /locus_tag="Rpic12D_3928" /db_xref="GeneID:8021615" CDS 507773..508666 /locus_tag="Rpic12D_3928" /inference="protein motif:PFAM:PF00665" /note="PFAM: Integrase catalytic region; KEGG: rme:Rmet_6074 integrase, catalytic region" /codon_start=1 /transl_table=11 /product="Integrase catalytic region" /protein_id="YP_002983857.1" /db_xref="GI:241665498" /db_xref="InterPro:IPR001584" /db_xref="GeneID:8021615" /translation="MRYAFIERNRRYWPVSVLCELLGVSPSGYHQRKQRTVSTDRPDR GRLSDDALLAHIKAIHAGVKGEYGWPRMWKELLARGVRVGKERVRKLMALHGIRARHK RKYIATTNSNHDLPVAPNLLQRDFSPAAPNQVWTSDITYVATAEGWLYLVVIIDLFSR QVVGWSMQPHMKAELVTDALRMAWFRRRPEAGVIVHTDRGSQYCSHLFQDALKAYGMR SSMSRRGDCWDNAPTESLWGSLKVARLHGRQFATRRAAMDEVIDWLGFYNASRLHSTL GYVSPMTFEKNWSAAQQHRAA" gene 508678..509346 /locus_tag="Rpic12D_3929" /db_xref="GeneID:8021616" CDS 508678..509346 /locus_tag="Rpic12D_3929" /inference="protein motif:PFAM:PF00419" /note="PFAM: Fimbrial protein; KEGG: rme:Rmet_4253 fimbrial protein" /codon_start=1 /transl_table=11 /product="Fimbrial protein" /protein_id="YP_002983858.1" /db_xref="GI:241665499" /db_xref="InterPro:IPR014779" /db_xref="GeneID:8021616" /translation="MGFVEQGQGQSVNIADMTQATTTWEIDGASTTYWSVTGPLLLRI KKIGQVGADASVPCCVLGYHTVDNQITPLTYKTSNTSTVATRSCKTPSVTVKMGDQNE VRGFQGVGTSLSPVSFSIALKECPEGLNKVSYQLNPNSAIVDASRSVVALDAGSTAKG VGVQLLNSAGNPVALKTKLQFAQYDKQGGNFNIPLQAAYYQTANQIVPGTANTSVAFV MGYN" gene complement(509572..509656) /locus_tag="Rpic12D_R0064" /note="tRNA-Leu6" /db_xref="GeneID:8021617" tRNA complement(509572..509656) /locus_tag="Rpic12D_R0064" /product="tRNA-Leu" /db_xref="GeneID:8021617" gene 509835..510662 /locus_tag="Rpic12D_3930" /db_xref="GeneID:8021618" CDS 509835..510662 /locus_tag="Rpic12D_3930" /EC_number="3.5.2.6" /inference="protein motif:PRIAM:3.5.2.6" /note="PFAM: penicillin-binding protein transpeptidase; KEGG: rso:RS02005 oxacillin hydrolase" /codon_start=1 /transl_table=11 /product="Beta-lactamase" /protein_id="YP_002983859.1" /db_xref="GI:241665500" /db_xref="InterPro:IPR001460" /db_xref="GeneID:8021618" /translation="MMKLRHAATGALLAALATFAHAEHPICTIVADAATGTVVLHEGK CDERVTPASTFKLALAVMGFDHGFLKDEHTPVEHFRRGDPDWGGEAWHQPIDPALWLQ YSVVWYSQRITHAMGAQTFQAYVRKLGYGNMDVSGDPGKHNGMDRSWITSSLKISPQE QVDFMRRIVNRQLPVSAHTYEMVDRTVQTWQVPGGWAVQGKTGTAGPAPGNTSPDGTW DQAHAYGWFVGWAKKGDKTYVFANLIQDDKVEPTSGGIRSRDALLARLPEVLAFAGH" sig_peptide 509835..509903 /locus_tag="Rpic12D_3930" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.990 at residue 23" gene complement(510672..511397) /locus_tag="Rpic12D_3931" /db_xref="GeneID:8021619" CDS complement(510672..511397) /locus_tag="Rpic12D_3931" /inference="protein motif:PFAM:PF01022" /note="PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: bpt:Bpet1842 ArsR family transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, ArsR family" /protein_id="YP_002983860.1" /db_xref="GI:241665501" /db_xref="InterPro:IPR001845" /db_xref="GeneID:8021619" /translation="MSHPNSFSGTAFLLADPARAAMLTALLDGHALPAGELAHAAGIT AQTASTHLAKLLDGGLVVVETEGRHKYFRLAGEHVAQALEHLAAITPSAVVRRTTPSP TARELGFCRCCYDHLAGQVGVAVTQALQSHGYLLPMPDKQYEITPAGIAWFGDVGLNV QDIRPTRRGLARQCLDWTERAHHLAGPLGVHFLRRLCDAGWMLRARNSRAVLVTPKGW QELHQRLGVDEATVRSDAGHRHA" sig_peptide complement(510672..510734) /locus_tag="Rpic12D_3931" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.809) with cleavage site probability 0.803 at residue 21" gene 511519..512895 /locus_tag="Rpic12D_3932" /db_xref="GeneID:8021620" CDS 511519..512895 /locus_tag="Rpic12D_3932" /inference="protein motif:PFAM:PF07690" /note="PFAM: major facilitator superfamily MFS_1; KEGG: bcm:Bcenmc03_5842 major facilitator transporter" /codon_start=1 /transl_table=11 /product="major facilitator superfamily MFS_1" /protein_id="YP_002983861.1" /db_xref="GI:241665502" /db_xref="InterPro:IPR007114" /db_xref="InterPro:IPR011701" /db_xref="GeneID:8021620" /translation="MDAVTMQPTHADTVPRKWLVLCVLSMAVLVAQIDTAVVNLAVRP IGQFFHADVGPLQWVIDAYNLAYAALLLSGGLLADLCGRRRAFVTGAAVFSVASVLCA LAASIGWLIGARAMAGVGASLLLPASLAILRVVWRDPAERAHALGVWAACNGLAMAIG PTAGGLLVTHFGWRAVFWVVVPVSVAIMVLAVRVVPESADAAHRRFDALAQVLGAIAL GGFAFAAIEAYHAPTVGGGVFVLALAALAWFVRVEARHGSAALVPLDLFSVREFRGAI TATAGMTFGMYGALFLLPLMWQSTGRFTVVGAGIALMPMALVFMAVSPTSGTVARRVG TRMATAGGVGIIALGLLVLAGFGGAVSIVPLAIGLALTGLGMGFATGPLMGAAVGAVG PERSGTASALVNVARMSGATLGVAMLGAVYAACGSGAAGLRVAMLCGGLVQLACAAVA WRHGEQPG" gene 513712..513891 /locus_tag="Rpic12D_3933" /db_xref="GeneID:8021621" CDS 513712..513891 /locus_tag="Rpic12D_3933" /inference="similar to AA sequence:KEGG:AZC_1023" /note="KEGG: azc:AZC_1023 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983862.1" /db_xref="GI:241665503" /db_xref="GeneID:8021621" /translation="MKFLLALPFIGLLWVPFYNQELPSLFGFPFFYWYQFLWVPITSL LIWIVFKNGQSQGEE" gene 513891..515399 /locus_tag="Rpic12D_3934" /db_xref="GeneID:8021622" CDS 513891..515399 /locus_tag="Rpic12D_3934" /inference="protein motif:PFAM:PF00474" /note="PFAM: Na+/solute symporter; KEGG: azc:AZC_1022 monocarboxylic acid permease" /codon_start=1 /transl_table=11 /product="Na+/solute symporter" /protein_id="YP_002983863.1" /db_xref="GI:241665504" /db_xref="InterPro:IPR001734" /db_xref="GeneID:8021622" /translation="MDGQINWTALAVFVFFFALVTVMGFIASRWQRGQSDKGAHIEEW GLGGRNFGTWITWFLVGGDFYTAYTVIAVPALVYAVGAYGFFALPYTILVYPIVFLIM PKLWKVAHAKGHVTAADAVYGRYGSRPLEFAVALTGVVATMPYIALQLIGMEVVIKAL GLTGELPLAAAFVILALYTYSAGLRAPALIAFVKDIMIYIVVLVAVVLVPAKLGGYGA VFAHAHDAFAVKGGATGLTLKPAQFLPFATLAIGSALAAFMYPHTLTGIFAARSADTI RKNAVFLPAYTVLLGLIALLGFMAYAAGVKVTNNNDVVPALFNALFPSWFTGFAFSAI AIGALVPAAVMSIGAANLFTRNFWKPYVAPDLSHAGEEKVAKVISLIVKAGALVFILF LPTKFALDLQLLGGVWIVQTFPSVVFGLFKLSNRFRAPALLAGWAAGMIGGSWLAFTD GIKPVHTFVIGGDKYTIYTGLAALAFNIVVAVVVQLIFGKRGEEAPALRQAG" gene 515684..516082 /locus_tag="Rpic12D_3935" /db_xref="GeneID:8021623" CDS 515684..516082 /locus_tag="Rpic12D_3935" /inference="similar to AA sequence:KEGG:Reut_B5732" /note="KEGG: reu:Reut_B5732 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983864.1" /db_xref="GI:241665505" /db_xref="GeneID:8021623" /translation="MRDLPGHKMIPTPEKTSFLCTLPGPKRDMAYSITVGFIDPTHPN CVQFTSFVGEGRRSFRVLASEEDVPSAARCSIESLCRMAIGQVMRDSLYAMTAVGDHR LDLHAPPWEGELKPAGARSAPRSPGQRSPG" gene 516200..516484 /locus_tag="Rpic12D_3936" /db_xref="GeneID:8021624" CDS 516200..516484 /locus_tag="Rpic12D_3936" /inference="similar to AA sequence:KEGG:RSc2698" /note="KEGG: rso:RSc2698 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983865.1" /db_xref="GI:241665506" /db_xref="GeneID:8021624" /translation="MDAYPICRYKGFDVYPLVYLFDPPREWHERRPDRSYNASVLICQ AGEQPSLEHSRIFRLSATPWENIGTAKRAAAKMAEDIIDGFAPGLSMAVV" gene complement(516636..517058) /locus_tag="Rpic12D_3937" /db_xref="GeneID:8021625" CDS complement(516636..517058) /locus_tag="Rpic12D_3937" /inference="protein motif:PFAM:PF00583" /note="PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_C6566 GCN5-related N-acetyltransferase" /codon_start=1 /transl_table=11 /product="GCN5-related N-acetyltransferase" /protein_id="YP_002983866.1" /db_xref="GI:241665507" /db_xref="InterPro:IPR000182" /db_xref="GeneID:8021625" /translation="MSPLVLRLASPQDFAAIRALLVEAGLPVEDVRPERIPHVVVASD DAGLQGCVALEQLGSAALLRSLAVRRTARRRGLGRMLVARAESDARAMGVDQLFLLTT SASGYFETLGYAVVDRDAVPDAMKASSQFAALCLGKIL" gene complement(517110..518180) /locus_tag="Rpic12D_3938" /db_xref="GeneID:8021626" CDS complement(517110..518180) /locus_tag="Rpic12D_3938" /inference="protein motif:TFAM:TIGR00832" /note="TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: bmj:BMULJ_05805 ACR3 family arsenite transporter" /codon_start=1 /transl_table=11 /product="arsenical-resistance protein" /protein_id="YP_002983867.1" /db_xref="GI:241665508" /db_xref="InterPro:IPR001991" /db_xref="InterPro:IPR002657" /db_xref="InterPro:IPR004706" /db_xref="GeneID:8021626" /translation="MHLSNVAPPNNVIAKPAINFFERYLTVWVALCIVVGMALGQVFP GVFQRIGRMEYAQVNLPVGLLIWVMIIPMLVKVDFGALHEVRQHIRGIGVTLVVNWLV KPFSMAFLGWLFIKQLFAPMLPAAQLDSYIAGLILLAAAPCTAMVFVWSRLTGGDPLF TLSQVALNDSIMVIAFAPLVGLLLGMSAITVPWATLLTSVVLYIVIPVLLAQALRKAL LAKGQPALDAVMARIGPWSITALLATLVLLFAFQGEAILKQPLVIALLAVPILIQVLF NSALAYWLNRAVGEKHSVACPSALIGASNFFELAVAAAISLFGFHSGAALATVVGVLI EVPVMLLVVRIVNQSKGWYERA" gene complement(518254..518757) /locus_tag="Rpic12D_3939" /db_xref="GeneID:8021627" CDS complement(518254..518757) /locus_tag="Rpic12D_3939" /inference="protein motif:PFAM:PF01451" /note="PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; KEGG: rso:RSp1128 putative arsenate reductase (arsenical PUMP modifier) protein" /codon_start=1 /transl_table=11 /product="Protein-tyrosine phosphatase, low molecular weight" /protein_id="YP_002983868.1" /db_xref="GI:241665509" /db_xref="InterPro:IPR017867" /db_xref="GeneID:8021627" /translation="MADHTTNVLILCTHNSARSVLSEGMLNHWARTLGKDVRAYSAGS APSGRINPFAVEALEQAGVDTTGYRSKSWDEFVADGAPQMRIVITVCDSAAAETCPYW PGSPVKVHWGYPDPSNAQGGDAGKRQAFELTRQAIGYRMLQLLMLPLDTLDNAALQAH LDRISQS" gene complement(518768..519250) /locus_tag="Rpic12D_3940" /db_xref="GeneID:8021628" CDS complement(518768..519250) /locus_tag="Rpic12D_3940" /inference="protein motif:PFAM:PF00903" /note="PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: reh:H16_A2179 lactoylglutathione lyase" /codon_start=1 /transl_table=11 /product="Glyoxalase/bleomycin resistance protein/dioxygenase" /protein_id="YP_002983869.1" /db_xref="GI:241665510" /db_xref="InterPro:IPR004360" /db_xref="GeneID:8021628" /translation="MKRFHVHVHVDDLSKSIAFYSKLFAAEPTRVESDYAKWMLDDPR INFAISTRGSTPGVDHLGFQVDDAAELAELKARAEAADMALLDEGETTCCYARSDKHW ITDPQGIAWEHFHSLANIPVFSEGTQEAAPAEASACCAPRAPGGKPVGIAVKSGSSCC" gene complement(519262..519585) /locus_tag="Rpic12D_3941" /db_xref="GeneID:8021629" CDS complement(519262..519585) /locus_tag="Rpic12D_3941" /inference="protein motif:SMART:SM00418" /note="SMART: regulatory protein ArsR; KEGG: rso:RSp1129 putative arsenical resistance operon repressor transcription regulator protein" /codon_start=1 /transl_table=11 /product="putative transcriptional regulator, ArsR family" /protein_id="YP_002983870.1" /db_xref="GI:241665511" /db_xref="InterPro:IPR001845" /db_xref="GeneID:8021629" /translation="MEENDVVRSLAALAHHLRLQVFRMLVVAGPTGMTPGALAEQLDV PGATLSFHLKELMNARLVTQERDGRNLIYRAAYDHMAALLGFLTANCCQGAACLEPST TDCKC" gene 519865..520785 /gene="rdgC" /locus_tag="Rpic12D_3942" /db_xref="GeneID:8021630" CDS 519865..520785 /gene="rdgC" /locus_tag="Rpic12D_3942" /inference="protein motif:PFAM:PF04381" /note="PFAM: putative exonuclease RdgC; KEGG: rso:RSc0618 recombination associated protein" /codon_start=1 /transl_table=11 /product="putative exonuclease RdgC" /protein_id="YP_002983871.1" /db_xref="GI:241665512" /db_xref="InterPro:IPR007476" /db_xref="GeneID:8021630" /translation="MWFKNLQLHRLPAPWAVTPDQIEQWLAPHAFRPGNSLDMQSAGW ASPRDDGALVYSTNRQMLLVFRAEKKLLPASVVNQVTRARAVELEEQQGFKVGRKQMR ELKEQVTDELLPRAFAIRRDTRVWIDPVNGWLVIDAAAQGVADDVRSLLVKSIDRLPI TSVQVARSPVAAMTDWLLSGEAPGGFTVDQDAELRSTGEGGATVRYVGHALEADDMRR HIEAGKQCTRLAMTWDNRISFLLTPSLTIKRVTPLDVIKEAADATAQNDDERFESDVA LMTGELGRMLTDLVESLGGDRHEAMHQAAA" gene complement(520843..521520) /locus_tag="Rpic12D_3943" /db_xref="GeneID:8021631" CDS complement(520843..521520) /locus_tag="Rpic12D_3943" /inference="similar to AA sequence:KEGG:Rmet_4026" /note="KEGG: rme:Rmet_4026 putative periplasmic ligand-binding sensor protein" /codon_start=1 /transl_table=11 /product="putative periplasmic ligand-binding sensor protein" /protein_id="YP_002983872.1" /db_xref="GI:241665513" /db_xref="GeneID:8021631" /translation="MSPQEQQALETFLAQLTQARAGTKDPQAEARILDAVARQPDAAY LLVQRAMLLDQALASAQAQIATLQSQLQAAQAGRSTSFMDAASNWGSHANGATPAPGY TPQQAAPASMPTAAQPMPSQPARGGFLSGGLGSTLGSIATTAAGVAGGALLFQGIENL FHHNSGGGFFGQQPMLGGPSETIINNIYEGDSGRSSNLDTSSRDDGLLDTDFSDSDYS DDDSTLI" gene 521787..524165 /locus_tag="Rpic12D_3944" /db_xref="GeneID:8021632" CDS 521787..524165 /locus_tag="Rpic12D_3944" /inference="protein motif:PFAM:PF00724" /note="PFAM: NADH:flavin oxidoreductase/NADH oxidase; monooxygenase FAD-binding; KEGG: rso:RS02007 salicylyl-CoA 5-hydroxylase" /codon_start=1 /transl_table=11 /product="NADH:flavin oxidoreductase/NADH oxidase" /protein_id="YP_002983873.1" /db_xref="GI:241665514" /db_xref="InterPro:IPR001155" /db_xref="InterPro:IPR002938" /db_xref="InterPro:IPR003042" /db_xref="InterPro:IPR016130" /db_xref="GeneID:8021632" /translation="MKIVCIGGGPAGLYFALLMKLQDPSHDITVVERNRPYDTFGWGV VFSDQTLGNLQRADAKSAAQILDAFNHWDDIEVHIRGQVVRSGGHGFCGIGRKRLLNI LQARCEEEGVKLVFETDVQDQDLENDGAYVDADLIIASDGLNSRIRTKYAATYQPDID TRRCRFVWLGTHKLFEAFTFAFEETEHGWFQAHAYRFDDETSTFIVEAPEEVWRAAGL ETMEKEEAIAYCERLFAKYLDGNKLISNATHLRGSAQWIRFPRVVCRHWVHTNAHGTP VVLMGDAAHTAHFSIGSGTKLALEDSIELARSIGQHPGDLRAALEHYEAVRSVEVLRI QNAARNSTEWFENVDRYANLPTEQFAYSLLTRSQRISHENLRQRDKRYLEQFEDWIAE QAGAPRGPQHGPVPPMFTPFTVRDVTLKNRVVVSPMAQYSCEDGQPADYHLVHLGARA MGGAGLVMAEMTCVSPDARITPGCPGLWNTDQRDGWARIVQFVHANSDAKLGIQLGHA GAKGSTRVAWEGIDLPLEDGQNWALISASPQQYLDGVSQWSRAMTRDDMDRVRDDFVH AARLAAEAGFDWLELHCAHGYLLSSFISPLTNQRNDEYGGTLDNRLRFPLEVFHAVRE VWPSNKPMSVRISAHDWVEGGITPDDAVEIARVFKAAGADMIDCSSGQVSKKEQPVYG RMFQTPFADRVRNEAGIATIAVGAISEADHVNSIIAAGRADLCAVARPHLANPAWTLN EAARIGYLDMPWPKQYRAGKLQLERNLERERAMAAQAAGLSPLEQANRMQGV" gene 524167..524949 /locus_tag="Rpic12D_3945" /db_xref="GeneID:8021633" CDS 524167..524949 /locus_tag="Rpic12D_3945" /inference="protein motif:PFAM:PF00106" /note="PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: rso:RS02008 oxidoreductase protein" /codon_start=1 /transl_table=11 /product="short-chain dehydrogenase/reductase SDR" /protein_id="YP_002983874.1" /db_xref="GI:241665515" /db_xref="InterPro:IPR001509" /db_xref="InterPro:IPR002198" /db_xref="InterPro:IPR002347" /db_xref="InterPro:IPR002424" /db_xref="InterPro:IPR013968" /db_xref="GeneID:8021633" /translation="MATPAMLTGHHAVVTGAGRGIGAAIAAQLAAHGATLTLMGRNAD VLHATAKTLPDSARAQVVTCDVTDEASVSAAFESARAGLGPISILVNNAGQAESASFA KTTLDQWQRMLAVNLTGTFLCTQAALPDVQASGRGRIVNIASTAGQRGYAYVSAYVAA KHGVIGLTRSLALELAARGVTVNAVCPGYTETDIVRESIDRIVARTGRSEEEARAELV KGNPQGRLITPDEVANAVVWLCSDGASSITGQAISVSGGEVM" gene 524946..525530 /locus_tag="Rpic12D_3946" /db_xref="GeneID:8021634" CDS 524946..525530 /locus_tag="Rpic12D_3946" /inference="protein motif:PFAM:PF01047" /note="PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: rso:RS02009 putative transcription regulator protein" /codon_start=1 /transl_table=11 /product="transcriptional regulator, MarR family" /protein_id="YP_002983875.1" /db_xref="GI:241665516" /db_xref="InterPro:IPR000835" /db_xref="GeneID:8021634" /translation="MSTERTRRKTALATRASGHHAVVQALGDQHIGLEARAHVDDHMD VKIWLRLLACSTQIEQQIRQRLRTRFNTTLPRFDYLAQLDRHPDGLRMNVLSRYLMVT GGNVTGLTDQLEKEGLVKREADPDDRRSFRVLLTDAGRRHFAEMAAEHERWLIEMFDG LGIANKDALYAQLGHLRVHLAQREQELDAREDQP" gene 525548..526408 /locus_tag="Rpic12D_3947" /db_xref="GeneID:8021635" CDS 525548..526408 /locus_tag="Rpic12D_3947" /inference="protein motif:PFAM:PF00378" /note="PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rso:RS02010 enoyl-CoA hydratase" /codon_start=1 /transl_table=11 /product="Enoyl-CoA hydratase/isomerase" /protein_id="YP_002983876.1" /db_xref="GI:241665517" /db_xref="InterPro:IPR001753" /db_xref="GeneID:8021635" /translation="MTDPNHHVDPALLAGNRRPLAGYQAKHFLWSVEGGVATITLNRP ERKNPLTFDSYAELRDLFHQLKWADDVKAIVLAGASDNFCSGGDVHEIIGPLVQLKAP ELLMFTRMTGELVKAMRACPQPIVAAIDGVCAGAGAILAMSSDLRLGTARSKTAFLFN RVGLAGCDMGACAILPRIIGQGRASELLYTGRSMNGEEGERWGFFNRLCEPAQVLSQA QALAADLAAGPTFANGITKTMLHQEWTMTIEQAIEAEAQAQAICMLTEDFSRAYHAFV AKQKPVFEGN" gene 526410..527585 /locus_tag="Rpic12D_3948" /db_xref="GeneID:8021636" CDS 526410..527585 /locus_tag="Rpic12D_3948" /inference="protein motif:PFAM:PF00441" /note="PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rso:RS02011 acyl-CoA dehydrogenase oxidoreductase protein" /codon_start=1 /transl_table=11 /product="acyl-CoA dehydrogenase domain protein" /protein_id="YP_002983877.1" /db_xref="GI:241665518" /db_xref="InterPro:IPR006089" /db_xref="InterPro:IPR006090" /db_xref="InterPro:IPR006091" /db_xref="InterPro:IPR006092" /db_xref="InterPro:IPR013107" /db_xref="GeneID:8021636" /translation="MSDKDYLQWPFFDDKHRQLEAELDAWATKHIAHDHGPDVDAECR ALVKLLGQGGWLRHAVGGTAHGGAGETIDTRAICLIRETLARHSGLADFAFAMQGLGS GAISLHGTPEQRERYLTKVAHGEAISAFALSEPDAGSDVAAMASAAREDGNDYVLDGE KTWISNGGIADFYVVFARTGEAPGSRGISAFIVEAGTPGFEIAERINVIAPHPLARLR FTNCRIPASQRVGAAGEGFKVAMRTLDVFRTSVAAAALGFARRALDEALARATTRKMF SGVLADFQLTQAKLAQMATAIDSAALLTYRAAWQRDQGRNVTREAAMAKLTATENAQQ VIDAAVQMWGGLGVVSEQPVERLYREIRSLRIYEGATEVQQLIIARELLRAAAPAKS" gene 527622..529238 /locus_tag="Rpic12D_3949" /db_xref="GeneID:8021637" CDS 527622..529238 /locus_tag="Rpic12D_3949" /inference="protein motif:PFAM:PF00501" /note="PFAM: AMP-dependent synthetase and ligase; KEGG: rso:RS02012 acetyl-coenzyme A synthetase" /codon_start=1 /transl_table=11 /product="AMP-dependent synthetase and ligase" /protein_id="YP_002983878.1" /db_xref="GI:241665519" /db_xref="InterPro:IPR000873" /db_xref="GeneID:8021637" /translation="MPSAHIDTFARDRLPPAELQPVYRFDLPALQFPPQLNCATELLD RRVAAGEGGRLCIQATGIRWTYADLQAHANRIANVLVNEMGVVPGNRVLLRSPNSPML AACWFAVMKVGAIAVTTMPLLRAKELGQILGKGEIGFALCDARLVDELRDAVTQAAKP VQLLCFHDDTPEGLEAAMVRQPATFTNVDTAADDTCLLAFTSGTTGVPKATMHFHRDI LAICACWPPHVLQPRADDIFIGSPPMAFTFGLGGLLLFPMSVGASTVLLEKASPNDLV DGIRTFGATVLFTAPTTYRIIAARGDELRATPLRRCVSAGEALPVATRTLWKDATGIE LIDGIGATEMLHIFISAADADVRPGATGKAVPGYVAQVVDDAGNPVPPGTVGRLAVQG PTGCRYLADDRQRAYVRNGWNLTGDAYVMDEEGYFHYHSRTDDMIISSGYNIAAPEVE DALMQHPAVAECGVIGEPDEERGQIVKAFVVLHPGHSAGPEMVKTLQDFVKQTVAPYK YPRAIEFRTSLPRSEVGKLLRYRLREHDKS" gene 529235..529666 /locus_tag="Rpic12D_3950" /db_xref="GeneID:8021638" CDS 529235..529666 /locus_tag="Rpic12D_3950" /inference="similar to AA sequence:KEGG:RS02013" /note="KEGG: rso:RS02013 putative 4-hydroxybenzoyl-CoA thioesterase protein" /codon_start=1 /transl_table=11 /product="putative 4-hydroxybenzoyl-CoA thioesterase protein" /protein_id="YP_002983879.1" /db_xref="GI:241665520" /db_xref="InterPro:IPR008272" /db_xref="GeneID:8021638" /translation="MSDYHFERAARIRFAHCDPAGIVYFPQYLVLFNGLVEDWFTDGL GVSYAQMLGPRRIGLPIVKLHCEFSAISRMGDDVQFKLKLERLGNASLTLALDCWAGN EQRVQSQQVLVFTDLNTHRAIAVPPDVRQAIEASVQQSQSN" gene 529680..530072 /locus_tag="Rpic12D_3951" /db_xref="GeneID:8021639" CDS 529680..530072 /locus_tag="Rpic12D_3951" /inference="protein motif:PFAM:PF01042" /note="PFAM: Endoribonuclease L-PSP; KEGG: rso:RS02014 hypothetical protein" /codon_start=1 /transl_table=11 /product="Endoribonuclease L-PSP" /protein_id="YP_002983880.1" /db_xref="GI:241665521" /db_xref="InterPro:IPR006175" /db_xref="GeneID:8021639" /translation="MEVLLPPNWPRPKGYANGVSARGRMVFVAGMIGWDAQGVFHTDD LAGQVRQALQNIVEVLAAGDAKPEHIVRMTWYVTDKKAYVAAYPEIGQAFRELIGSFS IAMTAVEVAALVEDRAKVEIEVTAVVPD" gene complement(530378..531454) /locus_tag="Rpic12D_3952" /db_xref="GeneID:8021640" CDS complement(530378..531454) /locus_tag="Rpic12D_3952" /inference="protein motif:SMART:SM00342" /note="SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rme:Rmet_1732 transcriptional regulator, AraC family" /codon_start=1 /transl_table=11 /product="transcriptional regulator, AraC family" /protein_id="YP_002983881.1" /db_xref="GI:241665522" /db_xref="InterPro:IPR000005" /db_xref="GeneID:8021640" /translation="MPYLVRSASLTGYAEAARAGGLDPFRMLAEVGLPADSLSDVDLK IPADKVGRLLELSAQRSGIETFGLRMAETRRASNLGPLILLVRDEPTLRQALQAMARY GHLHNEAIFLHVEEEDGIAVIRDEVLASDVGSLKQATELVVGVLFRLLRFFLGDDWHP KTVLFAHAAPKDRSVHARVFGSNVEFGHAFSGIVCNASDLDLPLPSADPVMARYVRRY LNDLDPEGGKRMSDEVRQMVIMLLPSGRATVDHIARHLGVNRRTIHRHLTQEGTTFSS ILDAVRSELAVRYLDQGERQCAEISGFLGFSEPSAFTRWFRGTFGCSPTQFKVSKASA FDKGMISRSHAGDQKKKTRRSRLS" gene 531594..531989 /locus_tag="Rpic12D_3953" /db_xref="GeneID:8021641" CDS 531594..531989 /locus_tag="Rpic12D_3953" /inference="protein motif:PFAM:PF02627" /note="PFAM: Carboxymuconolactone decarboxylase; KEGG: reu:Reut_B4714 carboxymuconolactone decarboxylase" /codon_start=1 /transl_table=11 /product="Carboxymuconolactone decarboxylase" /protein_id="YP_002983882.1" /db_xref="GI:241665523" /db_xref="InterPro:IPR003779" /db_xref="GeneID:8021641" /translation="MTTNAPIDPSATPVCDSMRATGNWNPNWEPFAELDPAWTEKFMA MGVMPHRVLDPKTLEFLAIAVDASCTHMYAPGVRRHIRKALELGATKEEITAVLQAVS VLGIHSMSLGAPILLEELAARENTTATVE" gene 532025..533074 /locus_tag="Rpic12D_3954" /db_xref="GeneID:8021642" CDS 532025..533074 /locus_tag="Rpic12D_3954" /inference="protein motif:PFAM:PF05853" /note="PFAM: protein of unknown function DUF849; KEGG: reu:Reut_B4715 hypothetical protein" /codon_start=1 /transl_table=11 /product="protein of unknown function DUF849" /protein_id="YP_002983883.1" /db_xref="GI:241665524" /db_xref="InterPro:IPR008567" /db_xref="GeneID:8021642" /translation="MQFFDDSMLPENQEPLVIQVAPFGPQFLPSDSDDIAVSMDAQIQ KAVDCYNAGATVLHVHVREEDGKGSKRLSKFNEMLTRLREAVPNMVLQVGGSISFAPE DEGAAAKWLSDDTRHMLAELSPRPDQVTIAINTNQMNVTELLTHDDCAGTSMAEPAYF QAYKEMWIPSGPTFVEEHLKRLQASGIQPHFMLADVGQLETVERLIRRGHYTGPVVLN WVAIGGGADGPNPRNMMEFINRCPQGAVLTIESLMRHVLPLNTMAIAMGLHVRVGIED NLWGKKGERMTSVQQVEQMVRIARELHRDVASGTDARRIYKIGEHYNGIDETLAAVGY EPNRKPGQRGFQLAA" gene 533190..534011 /locus_tag="Rpic12D_3955" /db_xref="GeneID:8021643" CDS 533190..534011 /locus_tag="Rpic12D_3955" /inference="protein motif:PFAM:PF00106" /note="PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_A3610 putative dehydrogenase" /codon_start=1 /transl_table=11 /product="short-chain dehydrogenase/reductase SDR" /protein_id="YP_002983884.1" /db_xref="GI:241665525" /db_xref="InterPro:IPR002198" /db_xref="InterPro:IPR002347" /db_xref="InterPro:IPR013968" /db_xref="GeneID:8021643" /translation="MKLDKKVAVVTGAAGGLGKAIALAYADAGAKLVVCDINTTALEV TRAEIESRNAECLALHCDVGSSSAVANLFEQVDAHFGTVHVLVNNAAVIPSQPVDEQR RLQHYAYLTTPQPRHTLGFTSSMTDDDWHRFWDVNVHGVFYCTREALKRMEPQGDGKV INIASIAGLAALSAHSPHYSATKGAVVAFTRSVAAEVAGANIFVNAIAPGGVHTDHFE ALLQGIGEEKRNQLFQLVPLGRLGTPEEYASLAVYLAADGHYIAGQIISPNGGMF" sig_peptide 533190..533258 /locus_tag="Rpic12D_3955" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.905) with cleavage site probability 0.380 at residue 23" gene 534129..535412 /locus_tag="Rpic12D_3956" /db_xref="GeneID:8021644" CDS 534129..535412 /locus_tag="Rpic12D_3956" /inference="protein motif:PFAM:PF07690" /note="PFAM: major facilitator superfamily MFS_1; KEGG: reu:Reut_B4716 major facilitator transporter" /codon_start=1 /transl_table=11 /product="major facilitator superfamily MFS_1" /protein_id="YP_002983885.1" /db_xref="GI:241665526" /db_xref="InterPro:IPR007114" /db_xref="InterPro:IPR011701" /db_xref="GeneID:8021644" /translation="MFQKRPMIALIALLFIHTLAHIDRNMLLGFSSQVIADLGLSNAQ YGFLVGAVWVLSFGVMAVFLGTLADRFSRTRVIAGGLLVWSACTAASGFAQNFEQMAA ARFLVSSGEAALVPAAVAMLGELFPEKQRGTAIGLFFMGIPAGIGFSFLLAGTFGAAH GWRSTFQVLGVVGVLIAVSLACVQEAPWNVGTQQRGAPVLAQIRGALRVLGANPTLLA VTVGFVLVHMVFAGLSFTQLWLVRERGLDAATIARTIGALQLIVGTLGSVAGGMVGDR LARRMPGGHVGFMVLLVAICGPLMIAYRFAPPGSALFYVGMCAGFFLPLALYGPTNTV ILSQVPVHMRATISGFSMLLINVFAITLGNLAVGLLSDRLARTGASAPLTFVLLGTDV LAVMSGMCFLVAARVGLRTNAALGPACPVASQLHG" sig_peptide 534129..534191 /locus_tag="Rpic12D_3956" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.813) with cleavage site probability 0.807 at residue 21" gene 535790..535942 /locus_tag="Rpic12D_3957" /pseudo /db_xref="GeneID:8021645" gene complement(535970..537274) /locus_tag="Rpic12D_3958" /db_xref="GeneID:8021646" CDS complement(535970..537274) /locus_tag="Rpic12D_3958" /inference="protein motif:TFAM:TIGR00883" /note="TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: rso:RSp0075 putative alpha-ketoglutarate permease transmembrane protein" /codon_start=1 /transl_table=11 /product="metabolite/H+ symporter, major facilitator superfamily (MFS)" /protein_id="YP_002983886.1" /db_xref="GI:241665527" /db_xref="InterPro:IPR004736" /db_xref="InterPro:IPR005828" /db_xref="InterPro:IPR005829" /db_xref="InterPro:IPR007114" /db_xref="InterPro:IPR011701" /db_xref="GeneID:8021646" /translation="MDTTATPHAVDPHDTRRRIFAIVGASSGNLVEWFDFYVYAFCSL YFAPAFFPSGDRTTQLLNTAGVFAAGFLMRPIGGWLFGRIADKHGRRAAMMISVLMMC GGSLVIAVVPTYAQIGALAPFILLLARLFQGLSVGGEYGTSATYMSEVALKGRRGFFA SFQYVTLIGGQLCALLVLVVLQQLLTTAELKAWGWRIPFAVGALTALVSLYLRKSLQE TQTVASRTAKGAGTIRGAWQHKGAFLRVIGFTAGGSLIFYTFTTYMQKYLVNTAGMNT KVASNVMTAALFVYMVLQPVFGALSDRIGRRTSMLFFGVLSVLGTVPLMHALATVSSP YAAFGLITVALAIVSFYTSISGLIKAEMFPPEVRAMGVGLSYAIANAVFGGSAEYVAL WFKKAGTEPTFYWYVTALCALSLVVTYFMPDPSKEGYLRNEP" gene complement(537458..538678) /locus_tag="Rpic12D_3959" /db_xref="GeneID:8021647" CDS complement(537458..538678) /locus_tag="Rpic12D_3959" /inference="protein motif:PFAM:PF07690" /note="PFAM: major facilitator superfamily MFS_1; KEGG: rso:RS05543 hypothetical protein" /codon_start=1 /transl_table=11 /product="major facilitator superfamily MFS_1" /protein_id="YP_002983887.1" /db_xref="GI:241665528" /db_xref="InterPro:IPR007114" /db_xref="InterPro:IPR011701" /db_xref="GeneID:8021647" /translation="MSASPASPTPSATTAPAATHSDTQGLIRLLTAGAGISVACIYLN HPLLGLISRDLNIAPNALGVLPTLTAAGYASGIFFFGPLGDRYDRRLVILWKAVLLTL ALIGSCLAPNLPLLAAAGFAIGLSATIAQDFVPSAAAISTDHNRNRNIGTVMTGLLIG IVSSRVFSGIVADHFGWRAAFGVSAVAIVGLAIAVRASHFGVTPATRQPYFTLLRSLG TLFMQHPRLRASALTQAFIGIAFSGFWSTVALHLTRSLGLSTGQAGLLGLAGAAGALG ASIAGRLSGRVAPGRIAAGGALLMAVTFASMAMFPQSLIAIVIGTLVFDVGVQAALVS HQTIIYALAPEARSRINAVFMTALFIGMSVGAYGASLAWNAGRWSGLMTFCASASLVA LGLRALFNARLGAH" gene complement(538778..539614) /locus_tag="Rpic12D_3960" /db_xref="GeneID:8021648" CDS complement(538778..539614) /locus_tag="Rpic12D_3960" /inference="protein motif:PFAM:PF07702" /note="PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: rso:RS05542 putative DNA-binding transcriptional regulatory transcription regulator protein" /codon_start=1 /transl_table=11 /product="transcriptional regulator, GntR family" /protein_id="YP_002983888.1" /db_xref="GI:241665529" /db_xref="InterPro:IPR000524" /db_xref="InterPro:IPR011663" /db_xref="GeneID:8021648" /translation="MPDAVVPLYHQIYVVLRQQILEGKFGDGPMPGEIELARQFGASR VTMRRVFDYLVKEGLVRRHRGMGTFVVKPDDPAAQGSAGQTLLQNIIDVGERTSAVVV EFEDVLAPPDEAKCLEVAPGTPVKKLVRVRHLEDTPMALITTWLPLDVTSKLTLDRLA NQSLLRLIEGSGVRIDRASQVVSARLADVATAQYLDVAVGAPLLSVQRIVREMSGRPV QLLQGLYRPDRYEYRMELSRVGEDRARLWIDNAGHDVLGGHSEDVEDVPTPAAAGRIE HS" gene complement(539779..540330) /locus_tag="Rpic12D_3961" /db_xref="GeneID:8021649" CDS complement(539779..540330) /locus_tag="Rpic12D_3961" /inference="protein motif:PFAM:PF01638" /note="PFAM: helix-turn-helix HxlR type; KEGG: rso:RS05541 hypothetical protein" /codon_start=1 /transl_table=11 /product="transcriptional regulator, HxlR family" /protein_id="YP_002983889.1" /db_xref="GI:241665530" /db_xref="InterPro:IPR002577" /db_xref="GeneID:8021649" /translation="MKTPETLSTTPASDLVPSMDPPCSIAAAVSIVGEKWTLLVLREA FSGVTRFDEFLRRTGCSSAILSSRLKALVTYGILRRVPYQEPGDRVRDAYKLTRAGVD LLPAIVALMQWGDRYLTPDGEGPILLRDRESGTPIHVALVNALGEPVAPKNSMREPNP RYGHGNDPASTAPAPADTSAADE" gene 540464..541042 /locus_tag="Rpic12D_3962" /db_xref="GeneID:8021650" CDS 540464..541042 /locus_tag="Rpic12D_3962" /inference="protein motif:PFAM:PF00583" /note="PFAM: GCN5-related N-acetyltransferase; KEGG: rso:RS05540 hypothetical protein" /codon_start=1 /transl_table=11 /product="GCN5-related N-acetyltransferase" /protein_id="YP_002983890.1" /db_xref="GI:241665531" /db_xref="InterPro:IPR000182" /db_xref="GeneID:8021650" /translation="MLYTIHRYPAEWIDRWTMHDGSVATVRPILPQDAPLEAALVEGL SSESRYARFLVGGGRLSDEMLSAYTQIDYVSHMALVVSVARPDGTGEDLIADGRFVIE DGVAEFAMLVADAWQGKGVGRRLFATLVRAARVSGAREVFGEVLATNRRMIGLARDAG FRLANVPGDATVCTVRLPLAQAEAAVTPFVFV" gene 541281..541715 /locus_tag="Rpic12D_3963" /db_xref="GeneID:8021651" CDS 541281..541715 /locus_tag="Rpic12D_3963" /inference="protein motif:PFAM:PF00903" /note="PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bxe:Bxe_B2073 glyoxalase/bleomycin resistanceprotein/dioxygenase superfamily protein" /codon_start=1 /transl_table=11 /product="Glyoxalase/bleomycin resistance protein/dioxygenase" /protein_id="YP_002983891.1" /db_xref="GI:241665532" /db_xref="InterPro:IPR004360" /db_xref="GeneID:8021651" /translation="MSDVTPVLAPFHLAFPVHDIAAARAFYGGVLGCPEGRSAPDWVD FNFYGHQIVAHLAPEEAGHRKTSAVDGDAVPVRHFGVVLSMPEWDAAANKLRAAGVDF IIEPHIRFKGEVGEQATMFFLDPSGNALEIKAFANMASLFAK" gene 541766..542638 /locus_tag="Rpic12D_3964" /db_xref="GeneID:8021652" CDS 541766..542638 /locus_tag="Rpic12D_3964" /inference="protein motif:PFAM:PF03466" /note="PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: reu:Reut_B4146 LysR family transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LysR family" /protein_id="YP_002983892.1" /db_xref="GI:241665533" /db_xref="InterPro:IPR000847" /db_xref="InterPro:IPR005119" /db_xref="GeneID:8021652" /translation="MLRELKTFIAVARHGTFAGAGERIGLTQSAVSAQIQRLEASLGF QLFDRTGRSATLNAAGRDALAQAEQIVTLYDRLGDQASGNEQRGLVRIGAIASVQASF LIDALVRFRLEFPHCRTRIVPGVSLDLLGLVDAGEIDMAVLIRPPFGVPADLEWRTLV AEPFVLLVPDSVPGDDWRVLLGHQPFIRYDRRSFGGRRVDQFLRDQHITTHDVIELDE LQGMTQLVARGQGVALAPQTAAQGAWPPGVRAIDLGNDTFTREIGLIERPRHSRQPIA GRLADCIDEAARAP" gene 542739..543524 /locus_tag="Rpic12D_3965" /db_xref="GeneID:8021653" CDS 542739..543524 /locus_tag="Rpic12D_3965" /inference="protein motif:TFAM:TIGR01256" /note="TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: rso:RSp0106 putative molybdate-binding periplasmic signal peptide protein" /codon_start=1 /transl_table=11 /product="molybdenum ABC transporter, periplasmic molybdate-binding protein" /protein_id="YP_002983893.1" /db_xref="GI:241665534" /db_xref="InterPro:IPR005950" /db_xref="InterPro:IPR006059" /db_xref="GeneID:8021653" /translation="MPCFSLRFAFRAPMRAAGWVAALSLGLAAPAHAADLVVSAAASL TNAFKAIAQQYEAQHPDTKVVLNFGASDVLMQQIARGAPADVFASADQQAMDKAVAEK LIKPESRHDFVANQLVLIVPATGTVPVHALADLTRPEVKRVAIGNPASVPVGRYAKRA LDAAQLWEPVSAKAVLAQNVRQALDYVSRGEVEAGLVFSTDAAIAADKVKVASAVPLN VPLTYPIAVTSGTKQPQQATDFVAFVMSPAGQAVLAKYGFLKP" sig_peptide 542739..542840 /locus_tag="Rpic12D_3965" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 1.000 at residue 34" gene complement(543529..544827) /locus_tag="Rpic12D_3966" /db_xref="GeneID:8021654" CDS complement(543529..544827) /locus_tag="Rpic12D_3966" /inference="protein motif:PFAM:PF07690" /note="PFAM: major facilitator superfamily MFS_1; KEGG: rso:RS03015 putative transport transmembrane protein" /codon_start=1 /transl_table=11 /product="major facilitator superfamily MFS_1" /protein_id="YP_002983894.1" /db_xref="GI:241665535" /db_xref="InterPro:IPR007114" /db_xref="InterPro:IPR011701" /db_xref="GeneID:8021654" /translation="MQRLARLIAPRFHYSWIALAVVFLILLCAAGTRATPSVMMLPLE HEFGWSRSTISLAISIGIALYGLTGPFAAASMQYFGIRPTVLGALAVLVSGTALSAMM HEPWQMVLLWGVMVGGGTGVAAITLGATVVNRWFTSHRGLAMGILTASSATGQLVFLP MMAAVVEHYGWRPVVLIVAGALALLLPIVALLLPESPRSVGLRTYGEPADAPETSQGP RANPISLAMQTLVQAMRKRDFWLLFASFFICGASTNGYIGTHFIAMCADHGFSEVKGA SLLAAMGIFDLVGTTLSGWLSDRYNSRVLLFWYYGLRGLSLIYLPYAFGFEFFGLPVF AIFYGLDWIATVPPTVRLTNDVFGKAAAPIVFGWIVAGHQLGAAFATLGAGMMRASLG NYTLSSMISGGLCVAGAFLVLRIHRTPKQDAGRAGQPATA" sig_peptide complement(543529..543633) /locus_tag="Rpic12D_3966" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.983) with cleavage site probability 0.953 at residue 35" gene 544989..545630 /locus_tag="Rpic12D_3967" /db_xref="GeneID:8021655" CDS 544989..545630 /locus_tag="Rpic12D_3967" /inference="protein motif:PFAM:PF00440" /note="PFAM: regulatory protein TetR; KEGG: rso:RS03014 putative transcription regulator protein" /codon_start=1 /transl_table=11 /product="transcriptional regulator, TetR family" /protein_id="YP_002983895.1" /db_xref="GI:241665536" /db_xref="InterPro:IPR001647" /db_xref="GeneID:8021655" /translation="MAARGPRTVSTVEQPKPGPRRISGEDAHASLLEAARQLFYYEGV RAVGVEAVVEKAGVNKMSLYRQFKSKDDLVLAYLERSDESFWGYFDNSMAKHPDDARA QLLQFFIDVSERASRPGYRGCPFVNVAAEFPDLSHAARQFVQRNKARLLARLRERAEA AGAADPDALADDLAFLIEGAYTASQTFGTDAPRLIKCLPRTARVLLDANIPAR" gene 545762..546733 /locus_tag="Rpic12D_3968" /db_xref="GeneID:8021656" CDS 545762..546733 /locus_tag="Rpic12D_3968" /inference="protein motif:PFAM:PF07726" /note="PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rso:RS03013 hypothetical protein" /codon_start=1 /transl_table=11 /product="ATPase associated with various cellular activities AAA_3" /protein_id="YP_002983896.1" /db_xref="GI:241665537" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR011703" /db_xref="InterPro:IPR011704" /db_xref="GeneID:8021656" /translation="MTPNQVPLSPVRTAPAAGMQPSSLPAALLQAQRALDRIVLGKPL QIRLALACLLSRGHLLLEDLPGVGKTTLAHALARTLGLQYQRVQFTSDLLPADLIGVS IYVKEKGAFEFHPGPLFAQVVLADEINRATPKAQSALLEAMAEGQVTHDGATYPLPEP FFVIATQNPLNQIGTHPLPESQLDRFTMRLSLGYPDQHSERALYLGGGARQDIEPVLT AAQVVALQAGADAVHAAPALVDYVLALVNATRTDAQVQMGLSPRAGLALLAAARAWAL VDGRDAVLPEDVQAVFTAVAAHRLLPTGGTLSATALAQRLLDTVAIP" gene 546746..547819 /locus_tag="Rpic12D_3969" /db_xref="GeneID:8021657" CDS 546746..547819 /locus_tag="Rpic12D_3969" /inference="protein motif:PFAM:PF01882" /note="PFAM: protein of unknown function DUF58; KEGG: rso:RS03012 hypothetical protein" /codon_start=1 /transl_table=11 /product="protein of unknown function DUF58" /protein_id="YP_002983897.1" /db_xref="GI:241665538" /db_xref="InterPro:IPR002881" /db_xref="GeneID:8021657" /translation="MARVASVLAVPLRALGAGLAALPGVRLARTRVQRFLQRPRTPRE GRIRLDRNHVYILPTGAGASFALLLIVMLLTSLNYNVSLGFLLTFVLAGVAASAMWQT HRNLVDLEVRGAVGEAVFAGHALNVSVALANVTSWARVGVDVSAREAAAVETSLDARD AIVAALSFAGQPRGWFRLPRLTVSTRFPLGLFRAWSYADAPLTLLIYPAPEPAAPPLP ANFVPDPGEEPSATTPRTHVEDAVDQLRPYRPGDPLRSIAWKHSARLDTWMSRTGQQV HHAQCVLAWDALPASMHVEQRLSRLCAWVLAAEQGMAGEAPEYTLSLPGITLGPSRGP AHRDACLRALALWGKPAMPEDAS" sig_peptide 546746..546832 /locus_tag="Rpic12D_3969" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.775) with cleavage site probability 0.289 at residue 29" gene 547816..549840 /locus_tag="Rpic12D_3970" /db_xref="GeneID:8021658" CDS 547816..549840 /locus_tag="Rpic12D_3970" /inference="protein motif:PFAM:PF01841" /note="PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: rso:RS03011 hypothetical protein" /codon_start=1 /transl_table=11 /product="transglutaminase domain protein" /protein_id="YP_002983898.1" /db_xref="GI:241665539" /db_xref="InterPro:IPR002931" /db_xref="GeneID:8021658" /translation="MSLATGTPLFGPTRALTHREHGWLIAQLAIVLAPLLRALPLVTC AVFGVLLLLRTLLWVRRAPLPGKWVLGLTGLATLLVTLALALRTGGNIGRDLSVALLG AFLVLKLMESHTVRNGILVTQLCCFLLLSQVLFDQPPWLAATMLATAALLLRNWLLLL HPQARLRVSPVRVLIRLVAMGLPCAAVLFLLFPRLDHPLWSLPRSAETGTSGISDRMA PGSIGQLILSDELAFRADFSGTPPPLDTLYWRGMVLWRFDGQAWTAVSIRQRPARGGV PDSADSAGAVPDAVNYNITLEATHQRWLFALDRGVSIDARDDIGRSIDSEFISKQPLD QRMRYHARSRLPDRNRVDDAQPLDPFTQQLALALPPGNPQARALAAQWAGLPPAERVS AALRLFGRAPFAYTLQPEPLQGQQIDDFLFRTHRGFCEHYAGSFVFLMRAAGVPARVV VGYLGGEVNAMSGDIIVRQSDAHAWAEVWLAGRGWVRVDPTAAVAPQRVERGLAAAVP ASEFRSRRVEEPTWLRSVRWGLDGLISGWNRWVLGYDRTRQAQLFAWLGLDAADPRAV LWGVSAIFLLAALPLLWQQRKPRLDPVQAQWQRLCDRLARHGCARGPAEGPIAYAERA AAQFPAAAPALRQAAAGYVALRYGRDDGDARARAQRFTEWRTALARVRLR" gene 550353..551423 /locus_tag="Rpic12D_3971" /db_xref="GeneID:8021659" CDS 550353..551423 /locus_tag="Rpic12D_3971" /inference="similar to AA sequence:KEGG:RS03006" /note="KEGG: rso:RS03006 putative lipoprotein" /codon_start=1 /transl_table=11 /product="putative lipoprotein" /protein_id="YP_002983899.1" /db_xref="GI:241665540" /db_xref="GeneID:8021659" /translation="MKTKHRGALLSATLAGLLILGGCASSGSGDMSGTSGSSGDGSSA SSGGGSGSTGSGGTATTASNTPTGTVAYKSGGVLTASGGAISSLGSTIGSSNVPSASA LGNVVGGVGSTVSALGTGVQSGLGSMGTNPNPVGTTVSSTGNVVTEAGKTVEATGSLV SGVGSGPLQPLSPVTTPVGGGVSQVGQAVANAGGTLGTALSTGPVEQVTQQVSSAVVP LTSQVTTATQTLGNSTGLGTPAKNLLEMVGDDVANAGTSLTATNAPVVSGLGGVVTAT GNTVGALGGLLAGGSTSGSPLAPITNALGGAPTAGGTAPIGSLVTSVGTSVTSTGAST PLAPVTGTVGGALTTIGGALPH" sig_peptide 550353..550433 /locus_tag="Rpic12D_3971" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.369 at residue 27" gene complement(551518..552705) /locus_tag="Rpic12D_3972" /db_xref="GeneID:8021660" CDS complement(551518..552705) /locus_tag="Rpic12D_3972" /inference="protein motif:TFAM:TIGR02334" /note="TIGRFAM: AcnD-accessory protein PrpF; PFAM: protein of unknown function DUF453; KEGG: rso:RS03003 hypothetical protein" /codon_start=1 /transl_table=11 /product="AcnD-accessory protein PrpF" /protein_id="YP_002983900.1" /db_xref="GI:241665541" /db_xref="InterPro:IPR007400" /db_xref="InterPro:IPR012709" /db_xref="GeneID:8021660" /translation="MSHPAQVKIPATYMRGGTSKGVFFRLQDLPPAAQQPGAARDALL MRVIGSPDPYGKQIDGMGGATSSTSKTVILSKSTRPDHDVDYLFGQVSIDKPFVDWSG NCGNLSAAVGPFAISNGLVDASRVPQNGTAIVRIWQANIGKTIIAHVPITNGAVQETG DFELDGVTFPAAEVQLEFLDPAAEEDGDGGGAMFPTGNLVDDLDVPGVGTLKATMINA GIPTIFINAEAIGYTGTELQDAINGDAKALAMFETIRAHGAVRMGLIKSIDEAATRQH TPKVAFVAPPKDYVASSGKQVGAGDVDLLVRALSMGKLHHAMMGTAAVAIGTAAAIPG TLVNLAAGGGERGAVRFGHPSGTLRVGAEAKLVDGEWTVTKAIMSRSARVLMEGWVRV PGA" gene complement(552702..555299) /locus_tag="Rpic12D_3973" /db_xref="GeneID:8021661" CDS complement(552702..555299) /locus_tag="Rpic12D_3973" /EC_number="4.2.1.3" /inference="protein motif:TFAM:TIGR02333" /note="KEGG: rso:RSp0120 aconitate hydratase; TIGRFAM: 2-methylisocitrate dehydratase, Fe/S-dependent; PFAM: aconitate hydratase domain protein" /codon_start=1 /transl_table=11 /product="2-methylisocitrate dehydratase, Fe/S-dependent" /protein_id="YP_002983901.1" /db_xref="GI:241665542" /db_xref="InterPro:IPR000573" /db_xref="InterPro:IPR001030" /db_xref="InterPro:IPR012708" /db_xref="GeneID:8021661" /translation="MNTTHRKPLPGTKLDYFDAREAVEAIKQGAYDKLPYTSRVLAEN LVRRCDPATLTDSLKQLIERKRDLDFPWFPARVVCHDILGQTALVDLAGLRDAIADQG GDPAKVNPVVPVQLIVDHSLAVECGGFDPDAFAKNRAIEDRRNEDRFHFIDWTKLAFK NVDVIPAGNGIMHQINLEKMSPVIQAHDGVAYPDTCVGTDSHTPHVDALGVIAIGVGG LEAENVMLGRASWMRLPDIVGVELTGQRQPGITATDIVLALTEFLRKQKVVGAYLEFY GEGASKLTLGDRATISNMAPEYGATAAMFSIDDNTLDYLRLTGRTDEQVKLVETYAKT AGLWSDTLKHAEYERVLRFDLSSVVRNMAGPSNPHARVATTDLAAKGIAGKWEETPGQ MPDGAVIIAAITSCTNTSNPRNVIAAALLARNANRLGLTRKPWVKSSLAPGSKAVELY LEEAGLKHELEKLGFGIVAFACTTCNGMSGALDPKIQQEIIDRDLYATAVLSGNRNFD GRIHPYAKQAFLASPPLVVAYAIAGTVRFDIERDSFGTDANGKPILLKDLWPTDEEID AIVRASVKPEQFRTVYIPMFEQRSESTAKVSPLYNWRPQSTYIRRPPYWEGALAGERT LKGLRPLAVLGDNITTDHLSPSNAILASSAAGEYLAKMGLPEEDFNSYATHRGDHLTA QRATFANPTLINEMAVVDGAVKKGSLARIEPEGKVTRMWEAIETYMDRKQPLIVIAGA DYGQGSSRDWAAKGVRLAGVEAIVAEGFERIHRTNLIGMGVLPLEFKPGTTRLTLSID GTETYDVIGERKPRADLTLVIHRKNGERVEVPVTCRLDSDEEVSIYEAGGVLQRFAQD FLESSKEAA" gene complement(555615..556784) /locus_tag="Rpic12D_3974" /db_xref="GeneID:8021662" CDS complement(555615..556784) /locus_tag="Rpic12D_3974" /EC_number="2.3.3.5" /inference="protein motif:TFAM:TIGR01800" /note="KEGG: rso:RSp0121 methylcitrate synthase; TIGRFAM: 2-methylcitrate synthase/citrate synthase II; PFAM: Citrate synthase" /codon_start=1 /transl_table=11 /product="2-methylcitrate synthase/citrate synthase II" /protein_id="YP_002983902.1" /db_xref="GI:241665543" /db_xref="InterPro:IPR002020" /db_xref="InterPro:IPR011278" /db_xref="GeneID:8021662" /translation="MSEADNSTPNAGAFKPKKSVALSGVTAGNTALCTVGRTGNDLHY RGYDILDLAAACEFEEVAHLLVHGKLPNKAELAAYKTKLKALRGLPANVKAALEWVPA SAHPMDVMRTGVSVLGTVLPEKDDHNTPGARDIADRLMASLGSMLLYWYHYSHNGKRI EVETDDDSIGGHFLHLLHGVEPPKSWVDAMHVSLNLYAEHEFNASTFTGRVIAGTGSD IYSAITGAIGALRGPKHGGANEVAFEIQKRYDTPDEAEADIRRRVEAKEVVIGFGHPV YTVSDPRNKVIKEVAKKLSKEASNTKMFDIAERLETVMWDIKKMFPNLDWFSAVSYHM MGVPTAMFTPLFVIARTSGWAAHIIEQRIDNKIIRPSANYTGPDDLKFVPISKRP" gene complement(556821..557717) /gene="prpB" /locus_tag="Rpic12D_3975" /db_xref="GeneID:8021663" CDS complement(556821..557717) /gene="prpB" /locus_tag="Rpic12D_3975" /inference="protein motif:TFAM:TIGR02317" /note="TIGRFAM: methylisocitrate lyase; KEGG: rso:RSp0122 2-methylisocitrate lyase" /codon_start=1 /transl_table=11 /product="methylisocitrate lyase" /protein_id="YP_002983903.1" /db_xref="GI:241665544" /db_xref="InterPro:IPR000918" /db_xref="InterPro:IPR012695" /db_xref="GeneID:8021663" /translation="MSTTHRHPTSAGAKFRAAVAESQPLQVVGAITAYAAKMAEQTGF KAVYLSGGGVAANSLGIPDLGISTMEDVLIDARRITDAVQIPLMVDIDTGWGGAFNIA RTIRSFIKAGVAAVHLEDQVGQKRCGHRPGKEVVSTDEMVDRVKAAVDARTDDDFVIM ARTDAAASEGIDAAIERAVAYVEAGADMIFPEAMKTLDDYRRFKAAVKVPILANLTEF GSTPLFTTDELRSANVDIALYCCGAYRAMNAAALNFYQTVMRDGTQKAAVETMQSRAD LYQYLGYHAYEDKLDALFAAKK" gene 557911..559857 /locus_tag="Rpic12D_3976" /db_xref="GeneID:8021664" CDS 557911..559857 /locus_tag="Rpic12D_3976" /inference="protein motif:TFAM:TIGR02329" /note="KEGG: rso:RSp0123 putative propionate catabolism operon regulatory transcription regulator protein; TIGRFAM: propionate catabolism operon regulatory protein PrpR; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; Propionate catabolism activator domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; PAS domain containing protein" /codon_start=1 /transl_table=11 /product="proprionate catabolism activator, Fis family" /protein_id="YP_002983904.1" /db_xref="GI:241665545" /db_xref="InterPro:IPR000014" /db_xref="InterPro:IPR002078" /db_xref="InterPro:IPR002197" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR010524" /db_xref="InterPro:IPR011704" /db_xref="InterPro:IPR012704" /db_xref="GeneID:8021664" /translation="MSPTAPDLTDRPRIWACGISRLSDLFLDIAAEYNDRAELRVITR GFEDIVREIDAAGAERPDVVVAGGSNGAYLKPRLSLPVVVINPTGFDVMHALARARRD AESVALVTHGDTPEEVRRFVAAYGMDVVFASYTSRQGAESCVLDLRDRGVGVVVGPGL VTDLATQAGMNAVFLYSRDSVRAAFDTALEVVQATRRETLRRQRLDNLLQHLRDGVVA LDAQGRVEAINQRLATALGIEAKQAIGQPLLSIAPNLLGLLPDTDGDTLGTVQGVNYV IHRGPLTSTGTGAAEGTVFTFQESRAVERLDRTLRSRQRPQQFSARYRLEDLVGESLA MERVRTLIRRYAKSDATVLVLGESGTGKEMVAQGMHQLSARRDFPFVAINCGAFPEAL LESELFGYEEGAFTGARKGGKTGLIEAAHRGTLFLDEIGEMPLPLQSRLLRVLQEREV VRLGSTEPTRVDIRVVAATHRALTDAVQAGTFRADLYYRLNILSIALPPLRERPDDVM PLAVELLVQAARRDPRLLLRIADTEEAARVLAGVAEPLRRYAWAGNVRELQSVVERIA VELAYTEDASAITQDVLRLIAPEVFAHATPGKPAVLTLRERSRGVEAEEIRAALAAHG GDRDAVCAALGISKTTLWRRLQMG" gene 559971..560666 /locus_tag="Rpic12D_3977" /db_xref="GeneID:8021665" CDS 559971..560666 /locus_tag="Rpic12D_3977" /inference="protein motif:PFAM:PF01966" /note="PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: reu:Reut_B4062 metal-dependent phosphohydrolase" /codon_start=1 /transl_table=11 /product="metal dependent phosphohydrolase" /protein_id="YP_002983905.1" /db_xref="GI:241665546" /db_xref="InterPro:IPR003607" /db_xref="InterPro:IPR006674" /db_xref="GeneID:8021665" /translation="MAQQSRPHIILASLTLAGGSRYPSALGHLVRTAAVAAYLANVLE LDDAEQRHIYLVAPVHDIGKLGIPDDVLLKPAALTDAEHEIMQRHSNIGADLLAGTAD PILQLAASVARHHHEHFDGSGYPAGLAGEDVPLAARIVAVADAFDAMLEPRVYREGMS EDDAVGAVADQSGRYFDPTLVECFLKNVLGVRRARAAAESLVQQYGDVSGVIRFYGAR DQSPAFLRYIQTL" gene 560907..562253 /locus_tag="Rpic12D_3978" /db_xref="GeneID:8021666" CDS 560907..562253 /locus_tag="Rpic12D_3978" /inference="protein motif:TFAM:TIGR00254" /note="KEGG: rfr:Rfer_0005 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein" /codon_start=1 /transl_table=11 /product="diguanylate cyclase" /protein_id="YP_002983906.1" /db_xref="GI:241665547" /db_xref="InterPro:IPR000160" /db_xref="GeneID:8021666" /translation="MIENNPSETARHALKLLASRRLAPTPDNFASIYYEIAGNKPDAD PPDAERMALVRELREQLARTVECCLPVLGEDDASIGPAAWALIRACRSEFEGLGSLNG KLSTFNHWLSLAAEDQSEIRRALLSLLQLVFENIAELSLDDRWLRGQIEALMKASEAP VSLRRLDDLRRRLMEVIQKQSSLKSKSIEAQEEMKRLLAAFMERLSVAAETSGEHHRQ MEACAKKIESANSIAEIAPAIQDALSATRWMSLESARNRDVLSAMKVKAEEAAAEVAQ LRKALDMASASARHDLLTGALNRKGLEEALEREVARAARQNTALCIAFLDIDDFKAIN DTHGHSFGDDALSHLAQVARESMRPQDTLARFGGEEFVILMPDTSLEEGVQTIVRLQR ALTQRFFAAGDTRLFITFSAGVAEVGKNEPPMAAIQRADRGMYQAKRAGKNKVVSV" gene complement(562276..562845) /locus_tag="Rpic12D_3979" /db_xref="GeneID:8021667" CDS complement(562276..562845) /locus_tag="Rpic12D_3979" /inference="protein motif:PFAM:PF00857" /note="PFAM: isochorismatase hydrolase; KEGG: reu:Reut_B4618 isochorismatase hydrolase" /codon_start=1 /transl_table=11 /product="isochorismatase hydrolase" /protein_id="YP_002983907.1" /db_xref="GI:241665548" /db_xref="InterPro:IPR000868" /db_xref="GeneID:8021667" /translation="MSTFALVPKQTALLVMHYQTDIMALFPSVAPALLANTRKLCDAA RATGISVYFAKFHFSPGYPEISPLNKNGQGVKQLGLFVEDRISPELGRQPDESIIIAH RASVFYGTDLQVRLSARGIDTLIMVGVASTGVMLSSIAHASDADYRLFTVKDCCYDPD PIVHEHLFATAFESRTTVLSLADALSMLG" gene 563054..564361 /locus_tag="Rpic12D_3980" /db_xref="GeneID:8021668" CDS 563054..564361 /locus_tag="Rpic12D_3980" /inference="protein motif:PFAM:PF00654" /note="PFAM: Chloride channel core; KEGG: bur:Bcep18194_A4091 Cl-channel, voltage gated" /codon_start=1 /transl_table=11 /product="Chloride channel core" /protein_id="YP_002983908.1" /db_xref="GI:241665549" /db_xref="InterPro:IPR001807" /db_xref="InterPro:IPR014743" /db_xref="GeneID:8021668" /translation="MFSPLHIADRSARRARRLWANYGIFWLGAVLVGLVSVAYAKLID VGFELFRNMVSHALWLPIVITPVGAALAIWLTRQFFRGAEGSGIPQVIATLEDGRLSS SLLSLRIMFGKIVVSFLGILCGFTIGREGPTVQIGASLMYAMRRGYRRSSKHIERQLT LAGAAAGLAAAFNTPLAGVVFAIEELTRSFVARNSGTLITAIIFSGVVALGLQGNYLY FGRIQAIGQFHLALVPVVIAASAICGVAGGVFCWLLLNIPRWMPARLVDLRQAQPVWF AFLCGVAIALIGLVSGGITFGSGYAEARGLLETHQALSPFYAVLKFCALIASYLSGIP GGIFAPSLAIGAGLGNIMSLVTSAIPLPSLAALCMVGYLAAVTQSPITSFVIVMEMID GHEMVLPLMAVALLSSQVSKALTPSFYHTLAHRFRALVSRPAA" sig_peptide 563054..563176 /locus_tag="Rpic12D_3980" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.769) with cleavage site probability 0.755 at residue 41" gene complement(564413..564892) /locus_tag="Rpic12D_3981" /db_xref="GeneID:8021669" CDS complement(564413..564892) /locus_tag="Rpic12D_3981" /inference="protein motif:PFAM:PF06983" /note="PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: reu:Reut_B4637 3-demethylubiquinone-9 3-methyltransferase" /codon_start=1 /transl_table=11 /product="3-demethylubiquinone-9 3-methyltransferase" /protein_id="YP_002983909.1" /db_xref="GI:241665550" /db_xref="InterPro:IPR009725" /db_xref="GeneID:8021669" /translation="MVSKNTICLWYDRDALDAANFYAQTFPDSNVTAVHRAPGNYPAG QEGDVLTVEFTVAGIPCLGLNGGPQFKHSEAFSFQIATDDQAETDRLWDAIVSNGGQE SACGWCKDKWGVSWQITPRALTAAYTDPDRAAAKRAFDAMMTMRKIDIAAIEAARRG" gene 565169..565291 /locus_tag="Rpic12D_3982" /db_xref="GeneID:8021670" CDS 565169..565291 /locus_tag="Rpic12D_3982" /inference="ab initio prediction:Prodigal:1.4" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983910.1" /db_xref="GI:241665551" /db_xref="GeneID:8021670" /translation="MDALAAEREGKATLPKLKAGKPEPVEVNSSPETLQMPDDV" gene complement(565352..566206) /locus_tag="Rpic12D_3983" /db_xref="GeneID:8021671" CDS complement(565352..566206) /locus_tag="Rpic12D_3983" /inference="similar to AA sequence:KEGG:RS02998" /note="KEGG: rso:RS02998 putative lipoprotein transmembrane" /codon_start=1 /transl_table=11 /product="putative lipoprotein transmembrane" /protein_id="YP_002983911.1" /db_xref="GI:241665552" /db_xref="GeneID:8021671" /translation="MPYRFRPLSVLCAAVSIAAALAACSSAPTPLYQQEQFDATASPY ARTFHAKSDATCEAARRALLSQGYVSSSPRPDTIDGSKNFQPSNDSHVVISFHVVCAE ANADGTSSTAYVNAVQDRYTLKKTSTSASVGLSILGSVSLPIGSGDDSMVKVASETIP AGVFYERYFNLVDHFLKIDPARQDRKVAKAAEKDHVAPLPEPAPTPQGEPMKMTTPVV PTPAAPPVPVAAPASAPAATPAPKAPAEAAPASAPAVTTPPAPAPAAAPSPAPASEPA SSTTGGAS" sig_peptide complement(565352..565453) /locus_tag="Rpic12D_3983" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.344 at residue 34" gene complement(566549..566779) /locus_tag="Rpic12D_3984" /pseudo /db_xref="GeneID:8021672" gene 567107..568078 /locus_tag="Rpic12D_3985" /db_xref="GeneID:8021673" CDS 567107..568078 /locus_tag="Rpic12D_3985" /inference="protein motif:PFAM:PF01396" /note="PFAM: DNA topoisomerase type IA zn finger domain protein; restriction endonuclease; KEGG: cti:pRALTA_0076 putative endonuclease, type II restriction enzyme" /codon_start=1 /transl_table=11 /product="DNA topoisomerase type IA zn finger domain protein" /protein_id="YP_002983912.1" /db_xref="GI:241665553" /db_xref="InterPro:IPR007560" /db_xref="InterPro:IPR013498" /db_xref="GeneID:8021673" /translation="MGRRRKQASTSDVLLALPWWMLALGAAASYLIFHNILPAAFSAN PLLSGVGMLARGLAWMPALLLGFFAVLSYLRERSQQADARLGPPRTEPTGRSRPPKAP PQPARNAAGSITPNPPHPTRNTPTPPQAATPAEPAPPQSWTLEAIHALEWKRFELLCV QYYEQMGFTVKTVPHGADGGIDATLYMAGQSAPVAVVQCKAWSKPVKVEQVRALGGSM LAHKVKRGVFWSLSGYVGNPVQEYSELAGIQLLDGPAVLERIRALAEDKQAALLAKVF EGDSRTPSCPACGVKLVARNGKSGAFWGCSNFPKCWNRLEMKHGVSM" sig_peptide 567107..567193 /locus_tag="Rpic12D_3985" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.855) with cleavage site probability 0.453 at residue 29" gene 568185..569081 /locus_tag="Rpic12D_3986" /db_xref="GeneID:8021674" CDS 568185..569081 /locus_tag="Rpic12D_3986" /inference="protein motif:PFAM:PF00270" /note="PFAM: DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: ses:SARI_00228 hypothetical protein" /codon_start=1 /transl_table=11 /product="DEAD/DEAH box helicase domain protein" /protein_id="YP_002983913.1" /db_xref="GI:241665554" /db_xref="InterPro:IPR011545" /db_xref="InterPro:IPR014001" /db_xref="InterPro:IPR014021" /db_xref="GeneID:8021674" /translation="MKTELPNEHGLSDGSLRHLLFYQDGKPSLSDIQHQGLVAGVARD TSMLVVSPTSTGKTQLAVWAIAKGIENDCRTVYLVTHRALAKQKFDDFKSLFLSNFLS GNPASLVLATGDSVEDSEGEFPPEPLKASLLVATYEKYLAMLSASGVPRDMSNTVVVC DEIQLIGDKNRGQNVEILLTLLRNAGWRQFVGLSAVLPSRDAHDLADWLGVQLIMKAT REKHLSYRTAFSVTLCHPGVDPSVAPVVAACGRLCVVESVDLGEALLRYCEGSLSNDQ LYRWLATPGQALAADLPFVERV" gene 569244..569747 /locus_tag="Rpic12D_3987" /db_xref="GeneID:8021675" CDS 569244..569747 /locus_tag="Rpic12D_3987" /inference="ab initio prediction:Prodigal:1.4" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983914.1" /db_xref="GI:241665555" /db_xref="GeneID:8021675" /translation="MGYHSFVDEFERICREHIREGRARAFAFIFYNMTHGLVRRALKS TNGFQVLNSASGKDLTVFYLHSGAVDGLSDNFNEKFLRILRVDEQITPPCIVFFRVNG ENIEDLDFRAIDDEVGDSHLIVEELRRYISEYIDRINEQGNLSGISWIATEMLSGLLK KALLHAW" gene complement(569879..570919) /locus_tag="Rpic12D_3988" /db_xref="GeneID:8021676" CDS complement(569879..570919) /locus_tag="Rpic12D_3988" /inference="ab initio prediction:Prodigal:1.4" /note="KEGG: gbm:Gbem_1911 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983915.1" /db_xref="GI:241665556" /db_xref="GeneID:8021676" /translation="MSAQSTSTYLISLEFKNFSRDMEDHYKTIDPSIEAFWHKASKIL RQCEYTHNDCTITIDVGWQRMANRIRRDNDLLRPVRIGTPLDKKWFSKVSRPLKITAK VNTINKNKYSDYKWYPSFFIEAFIHEFFLIANLSTPGSANFRSLFINSGNESRSTEVR LSSFCFENGWVESLDGGWPTVEALPIEDVREWFQAISIGYKQRASTGIEKALYVLLHM AKDETRIDSVIWIFNGLEALVSTRVGESVSGLVRRLGMILDLDLPAQKKLNKEIRSLY DLRSSFVHGGYAVPHPIHSEVIDRALDDDATKLYQLHQFGASLLISTIQALIKKKIIN LRFDEFMTVEKI" gene 571344..571622 /locus_tag="Rpic12D_3989" /db_xref="GeneID:8021677" CDS 571344..571622 /locus_tag="Rpic12D_3989" /inference="similar to AA sequence:KEGG:RSc3434" /note="KEGG: rso:RSc3434 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983916.1" /db_xref="GI:241665557" /db_xref="GeneID:8021677" /translation="MNVDDNLLYAQGALAAKEYLHKARMDMKMHRKFEPQTLRCHKQV YVKDKALEFQAGFMDAIGAFILSSLDGVTVDLFRWDVLHVLARANKQK" gene complement(571959..572155) /locus_tag="Rpic12D_3990" /pseudo /db_xref="GeneID:8021678" gene complement(572346..573416) /locus_tag="Rpic12D_3991" /db_xref="GeneID:8021679" CDS complement(572346..573416) /locus_tag="Rpic12D_3991" /inference="similar to AA sequence:KEGG:RS02986" /note="KEGG: rso:RS02986 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983917.1" /db_xref="GI:241665558" /db_xref="GeneID:8021679" /translation="MSISIRAPRNVKHPAPFLSLLRLVRDPHRRYRHARYIHGTRVGL GVLLSIAVTSGLGWPHGEWATISLLIVIAGLQHHGNIRKRAAERAWGTLIGAVAGLLL IVQQTWLGHLPLTYALTAIACGVCAYHAIGKGGYIALLAAITLVIVVGHGDNNLLDGA WRTLNVLVGIAIALLFSFALPLYATYSWRYRLAEALRECARAVAGLGQPGEASSERSK HLGKLNTLLVQLRSLMPSVSKEIDVPLERLEDIQRSLRICISTLELLNATRGTLGAAP AGALPDVGARRTRDTLIGMSRALRFGTLARLARPRAADSAEVSHAYGTPTVESALADG FANEIENLRQQLLAIAPQWNIG" gene 573702..575873 /locus_tag="Rpic12D_3992" /db_xref="GeneID:8021680" CDS 573702..575873 /locus_tag="Rpic12D_3992" /inference="protein motif:TFAM:TIGR00410" /note="KEGG: dsy:DSY1020 hypothetical protein; TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; PFAM: EAL domain protein; phosphotransferase system EIIC; SMART: EAL domain protein" /codon_start=1 /transl_table=11 /product="PTS system, lactose/cellobiose family IIC subunit" /protein_id="YP_002983918.1" /db_xref="GI:241665559" /db_xref="InterPro:IPR001633" /db_xref="InterPro:IPR003352" /db_xref="InterPro:IPR004501" /db_xref="GeneID:8021680" /translation="MTTQALSPWLRLLSAAERFDRGPYFIAIRRGLALSLPLIMVGAV ALLLRNPPTAGMRHLLLEAFGTRLDAFCDSVLAGTIGIGSLVALFGFADVLAQLHNQR AGHRVVNPTVAAVVVVSCFFTLIAPAANASLMAWLSLGQGLFGALVVASLGGSLFLKL CSIRRLRIPSHHLSNDLLVGDVLSVVPAGMLTILTFALLKAGMAWAGWLHFMAIVDPL LAWPYSAVSNSLLFGLGYETAAQVLWLFGIHGPNALYTVHQHILEPAAQANAAAVASG GQPPFIFTYHFFAVFARMGGSGGTLSLILALLISRRMQRGRKMALVVMLPALFNVNEP LLFGLPLVLNPVYAIPFLLTPVVQILIAYAATVADLMPKTSYPVAWTTPALFSGYAAT GSVWGAVVQLIGLVVGAAIYLPFVRMADVLSARRSQDVLASLLQIAESAEVSLKGRRC LDLPGDEGRMAVALASDLEDAIKREGQIFLEFQPQVDCSTGRVFGAEALLRWQHPVLG RVASPIVVALADDIGQIDQLGLRILSLACQQRAAWRDVLPDDFVVAVNLSPRQLLDCR LYRNVLDILHREGLSPTQLELEITESTMLLPDITAIGNLKQLREAGVKVALDDFGMGH TSLHYLRELPLDTVKIDRSLADVSAGSVNEHIVRSIASLSRTLNLSTVVEGVETEQQL ERLSALGCERFQGYFFSRPLAPSVCQQFVLDANLRPLVHAL" gene complement(575889..576488) /locus_tag="Rpic12D_3993" /db_xref="GeneID:8021681" CDS complement(575889..576488) /locus_tag="Rpic12D_3993" /inference="ab initio prediction:Prodigal:1.4" /note="KEGG: hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983919.1" /db_xref="GI:241665560" /db_xref="GeneID:8021681" /translation="MEAPLTDAPQTEALQAEVLQAGTLQAEAPMPEAPQAQASSSEPA PRAEPVVKVEQSYWAAEGLSARMRKARAITLYLMDPAMASLKAVDEAQLKDAGCEYST EDAALIANFAESVESASVRSNSFALQFEPREAVYLAVGGGSEMKLLFEKPYPNQSEVL GQINGQPVTVNKSLVEGLYRWAAKVGRVRRCESFVGKYR" gene 577119..577577 /locus_tag="Rpic12D_3994" /pseudo /db_xref="GeneID:8021682" gene 577719..578636 /locus_tag="Rpic12D_3995" /db_xref="GeneID:8021683" CDS 577719..578636 /locus_tag="Rpic12D_3995" /inference="protein motif:PFAM:PF00892" /note="PFAM: protein of unknown function DUF6 transmembrane; KEGG: bur:Bcep18194_C6931 hypothetical protein" /codon_start=1 /transl_table=11 /product="protein of unknown function DUF6 transmembrane" /protein_id="YP_002983920.1" /db_xref="GI:241665561" /db_xref="InterPro:IPR000620" /db_xref="GeneID:8021683" /translation="MPHTTTPASSHVTDLALLLTLSTLWGASYTFIRVGVETIPPLTF IAARTLIAATLLLAWMRSRNIRMPRDRQVWMRFGVQSLLNSVVPFTLIAWAERSVGAS LATVLNSTSPVMVFVATAFVTRHESVSLRKLVGVIAGFVGTCFVIGPSAFDGLGGQLV AQLAILAATACYAGAAIYGRSFKGLHPAAPATGSLLMGALVLTPTSLLVDHPWALQPS ARSLMALVALAVFSTALAFAIYFRLIQTLGAIGTTAQAYLRVPIGVAIGVVFLGESLP PSAWIGLACVVVGVAAMSMPARATQVLRA" gene complement(578668..579594) /locus_tag="Rpic12D_3996" /db_xref="GeneID:8021684" CDS complement(578668..579594) /locus_tag="Rpic12D_3996" /inference="similar to AA sequence:KEGG:RS02988" /note="KEGG: rso:RS02988 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983921.1" /db_xref="GI:241665562" /db_xref="GeneID:8021684" /translation="MTETLDMQRGLLLNLSPGRRTYWMAQAVAILSLVVLVSAVPFAK VQLAQLPSFVPIYESALILNDLITAALLFGQFAITRSRAMLALASGYLFTAATAVGHL LSFPGLFASGGLLGAGPQSTAWIYMFWHTGFPLFVIAYAVLKSREEREPGRFPVHTLT RQTALATVAAVLGASIACVLLATVGDHLLPTIMAANRYTRTMGIVAGGTWCFCVAALV ALWRSRPHLTLDVWLMVVLCVWICDVALSAVFNGGRYDLGFYAGRMFGLLGASFVLLL LLIENTVLHSRLAAARAELKRLAASHVADGER" gene 579859..580677 /locus_tag="Rpic12D_3997" /db_xref="GeneID:8021685" CDS 579859..580677 /locus_tag="Rpic12D_3997" /inference="protein motif:PFAM:PF00378" /note="PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rme:Rmet_3470 enoyl-CoA hydratase" /codon_start=1 /transl_table=11 /product="Enoyl-CoA hydratase/isomerase" /protein_id="YP_002983922.1" /db_xref="GI:241665563" /db_xref="InterPro:IPR001753" /db_xref="GeneID:8021685" /translation="MQPHSTTAATATPATNDALVLRDDHDGVVTLRLNRPLQFNALSE AMLDALQRVLDDIAQDATVRCVVLGAEGKAFCAGHDLREMRGTPELAYYRALFARCSV VMQAIQALPVPVIARVHGVATAAGCQLVGSCDLAIASDAARFAVSGINVGLFCSTPAV ALSRNVLAKRAFDMLVTGRFIDAATAADWGLINEAVPAADLDDAVARKVADIVSKSPT AIRYGKAMFYRQRQMPLADAYAYAGDVMARNMMDEDAGEGIDAFLEKRPARWRS" gene complement(580787..581701) /locus_tag="Rpic12D_3998" /db_xref="GeneID:8021686" CDS complement(580787..581701) /locus_tag="Rpic12D_3998" /inference="protein motif:PFAM:PF00561" /note="PFAM: alpha/beta hydrolase fold; KEGG: bcm:Bcenmc03_3335 alpha/beta hydrolase fold" /codon_start=1 /transl_table=11 /product="alpha/beta hydrolase fold protein" /protein_id="YP_002983923.1" /db_xref="GI:241665564" /db_xref="InterPro:IPR000073" /db_xref="InterPro:IPR000639" /db_xref="InterPro:IPR003089" /db_xref="GeneID:8021686" /translation="MRTDTFDGMYPYAPRFTDAPGFPMHYVDEGPADGEVVLCLHGEP TWGFLFRHLIAVLRGTHRMVVPDHMGFGKSGTPPSRSYWLQDHIDNLERFVLALDLRD ITLVMHDFGGPVGMGLASRHPDRVRRIVSVNGPTPFGQATLGERLAANAAVSPWFQWI VRAESEGRIEAVLGELGFNILSTLKLNGFEDHRLINDAWLQAYGARFATPADCVGAIG WAKGFATGAHRFELPDAAARRAIVTKPAMAIWGMADRTLHAEHFLPLFSELFPDAPVH RLPGVGHYSLEDAPDAIADRIATFLGQT" gene 581811..582302 /locus_tag="Rpic12D_3999" /db_xref="GeneID:8021687" CDS 581811..582302 /locus_tag="Rpic12D_3999" /inference="protein motif:PFAM:PF01638" /note="PFAM: helix-turn-helix HxlR type; KEGG: bcm:Bcenmc03_3334 HxlR family transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, HxlR family" /protein_id="YP_002983924.1" /db_xref="GI:241665565" /db_xref="InterPro:IPR002577" /db_xref="GeneID:8021687" /translation="MQMVKRTSHADSLCGVARPLDAIGDGWSLLIVRDAFDGLRRFGE FQRSLGLSKNILAVRLRNLVAHDILETVPASDGSAYQDYVLTEKGRALFPLLVALRQW GEAFCFAPDEAHVVLVDKATGKPVPRLELRAQDGRALAPEDTVVVHPSAIRPTKRQRA KAS" gene complement(582402..582521) /locus_tag="Rpic12D_4000" /db_xref="GeneID:8021688" CDS complement(582402..582521) /locus_tag="Rpic12D_4000" /inference="ab initio prediction:Prodigal:1.4" /note="KEGG: reu:Reut_A0606 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983925.1" /db_xref="GI:241665566" /db_xref="GeneID:8021688" /translation="MAAAAGRRHRVDLRLHGADALYSGTYADAALDRWADRIR" gene complement(582562..582720) /locus_tag="Rpic12D_4001" /db_xref="GeneID:8021689" CDS complement(582562..582720) /locus_tag="Rpic12D_4001" /inference="ab initio prediction:Prodigal:1.4" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983926.1" /db_xref="GI:241665567" /db_xref="GeneID:8021689" /translation="MDTREMLAIVGVTLAVITAYSLARDLTDEPLGLHAPQTGLMHVQ AQVSAPHR" sig_peptide complement(582562..582633) /locus_tag="Rpic12D_4001" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.987) with cleavage site probability 0.986 at residue 24" gene complement(582863..583798) /locus_tag="Rpic12D_4002" /db_xref="GeneID:8021690" CDS complement(582863..583798) /locus_tag="Rpic12D_4002" /inference="protein motif:PFAM:PF01965" /note="PFAM: ThiJ/PfpI domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_C6950 transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, AraC family" /protein_id="YP_002983927.1" /db_xref="GI:241665568" /db_xref="InterPro:IPR000005" /db_xref="InterPro:IPR002818" /db_xref="GeneID:8021690" /translation="MAHRIAVLIFPDFQLLDAAGPVAAFEVASRYRDDHYALRTVAAQ AGLVRSSSGARWDADALPPASQVDTLLIAGGDGVDAAMADARTRRFVQRCAARGARVA SVCSGSLLLAATGLLNGRRATTHWSRSEQFARAFPQVQLEPDHIYVNDGPIWTSAGIS AGIDLALALIADDLGERLARAVARQLVVYYRRPGGQSQFSALNEMDSARGRFKPLLDH VRRNLGAPHRVGDLAEHACMSPRHFARAFQVETGLTPAKAVEKLRVEAARAALESGAV SMQRVATECGFGDTERMRRSFQRLLGVPPSSLRAR" gene 583899..584585 /locus_tag="Rpic12D_4003" /db_xref="GeneID:8021691" CDS 583899..584585 /locus_tag="Rpic12D_4003" /inference="protein motif:PFAM:PF01965" /note="PFAM: ThiJ/PfpI domain protein; KEGG: bur:Bcep18194_C6949 ThiJ/PfpI family protein" /codon_start=1 /transl_table=11 /product="ThiJ/PfpI domain protein" /protein_id="YP_002983928.1" /db_xref="GI:241665569" /db_xref="InterPro:IPR002818" /db_xref="GeneID:8021691" /translation="MTTSPFIVVFALYNRVTQLDFTGPHEVFWRLPGAQCVVASAAGG EIHADGGLTISNVQRLADIPHADLICVPGGFGVIEAMEDAEFVRQVRRLADGARYVTS VCSGSLVLGAAGLLQGKRAACHWAWRNLLPAFGATVDEARVVRDGNLITGGGVTAGID MALTVMADIAGAEHAQAVQLGIEYAPAPPFDCGRPERAAPEILEAVTSRLDRLRADRH DAVQRAAQRL" gene 584621..585460 /locus_tag="Rpic12D_4004" /db_xref="GeneID:8021692" CDS 584621..585460 /locus_tag="Rpic12D_4004" /EC_number="3.2.2.9" /inference="protein motif:PRIAM:3.2.2.9" /note="PFAM: purine or other phosphorylase family 1; KEGG: rso:RSc3374 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase" /codon_start=1 /transl_table=11 /product="Adenosylhomocysteine nucleosidase" /protein_id="YP_002983929.1" /db_xref="GI:241665570" /db_xref="InterPro:IPR000845" /db_xref="GeneID:8021692" /translation="MTSFDVSTLQTGAAFCMNTPSSQPNARGPIGIVAALHEEINELL TWLSDAQCIHIGSRDFWTGELDGQTVVVVLSRVGKVAAASTTAVLITQFNVRAVVFAG VAGALAPGVAVGDVVVSEELLQHDVDASPLFPRWEIPLTGMARFPADAALASGLLESA GAVLADPHALLGPDVMRAFGIAAPQAHRGLIVSGDRFVCTSAESAVLRTALPDALAVE MEGAAVAQVCHEWGVPFAAIRTISDRADDAASVDFAQFITQVDSRYAVAILRKWLSTA AGA" gene complement(585466..585921) /locus_tag="Rpic12D_4005" /db_xref="GeneID:8021693" CDS complement(585466..585921) /locus_tag="Rpic12D_4005" /inference="protein motif:PFAM:PF07007" /note="PFAM: protein of unknown function DUF1311; KEGG: eca:ECA0765 hypothetical protein" /codon_start=1 /transl_table=11 /product="protein of unknown function DUF1311" /protein_id="YP_002983930.1" /db_xref="GI:241665571" /db_xref="InterPro:IPR009739" /db_xref="GeneID:8021693" /translation="MNTLTTLKTLALPVAVVLLTHSAGTFAAESLANGIKRRAPQGIS TKLYACVDKAPDNADAIGACLSAEKAAQNERLDRTYKTLLGTLNSKANDALVSSEQAW QDFHTRTAAFETAIYGKGKLDDLQRLENEIFRLSERANALDKYLAAKGH" sig_peptide complement(585466..585549) /locus_tag="Rpic12D_4005" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.998 at residue 28" gene complement(586025..586399) /locus_tag="Rpic12D_4006" /pseudo /db_xref="GeneID:8021694" gene 586412..586522 /locus_tag="Rpic12D_4007" /pseudo /db_xref="GeneID:8021695" gene 586656..587516 /locus_tag="Rpic12D_4008" /db_xref="GeneID:8021696" CDS 586656..587516 /locus_tag="Rpic12D_4008" /inference="similar to AA sequence:KEGG:Rmet_4636" /note="KEGG: rme:Rmet_4636 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983931.1" /db_xref="GI:241665572" /db_xref="InterPro:IPR009056" /db_xref="GeneID:8021696" /translation="MKNWLATIAGWTLCACAAFGNAAHAADAPDDGATLSVNIGTEHR TLSRDALLHDPHLTSVTVEDQNLKHRLTFKAIPVTALFRGQTVSPEASATTAASDGYV SHLPMRLLLGDRADGPRAWLAVEDPAAPWPTLKGQDIGPFRLIWTAPPAKASVVNESL WTYSIVRIDIAALPGERFAAIRPAAGLPADGPVMRGFATFQRVCFSCHTLNRAGDANL GPDLNVPYSPVEYLGDEKLRHLIRDPQSLRWWPNARMSAIDEKTLSDAQLNDLLAYFH HMTKRKSAAQ" sig_peptide 586656..586733 /locus_tag="Rpic12D_4008" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.999 at residue 26" gene complement(587533..588042) /locus_tag="Rpic12D_4009" /db_xref="GeneID:8021697" CDS complement(587533..588042) /locus_tag="Rpic12D_4009" /inference="protein motif:PFAM:PF08002" /note="PFAM: protein of unknown function DUF1697; KEGG: bja:bll4334 hypothetical protein" /codon_start=1 /transl_table=11 /product="protein of unknown function DUF1697" /protein_id="YP_002983932.1" /db_xref="GI:241665573" /db_xref="InterPro:IPR012545" /db_xref="GeneID:8021697" /translation="MPSYIAFLRAVNVGGTGKLPMAELRAMCESIGLTGVRTYIASGN VVFQSRLAETTVKAKLERCLEDYAGKPVGVLVRTGAELAAVLEGNPFKTAAPSRTVAI FLDTPPPADALAAATGRRTEEMALGTREIYVHYGDGMADSKLKIPAAKTGTARNMNTI ATLVDWATE" gene 588242..588670 /locus_tag="Rpic12D_4010" /db_xref="GeneID:8021698" CDS 588242..588670 /locus_tag="Rpic12D_4010" /inference="similar to AA sequence:KEGG:RSc3150" /note="KEGG: rso:RSc3150 putative transmembrane protein" /codon_start=1 /transl_table=11 /product="putative transmembrane protein" /protein_id="YP_002983933.1" /db_xref="GI:241665574" /db_xref="GeneID:8021698" /translation="MLKKIAPALIVATLAGLTALPAAADDLRNALGGALGGAGGAAVG GALGGQTGSIVGGAIGGGAGGALTANGRERKGAIVGGALGGGVGAAAGNAMGGHTGGI VGAGLGGGAGAALGGNVQRNSYSDRDDRGYRRHGKHHHHH" sig_peptide 588242..588316 /locus_tag="Rpic12D_4010" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.992 at residue 25" gene 588858..590237 /locus_tag="Rpic12D_4011" /db_xref="GeneID:8021699" CDS 588858..590237 /locus_tag="Rpic12D_4011" /inference="protein motif:PFAM:PF00070" /note="PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: rso:RS02078 mercuric reductase" /codon_start=1 /transl_table=11 /product="FAD-dependent pyridine nucleotide-disulphide oxidoreductase" /protein_id="YP_002983934.1" /db_xref="GI:241665575" /db_xref="InterPro:IPR000103" /db_xref="InterPro:IPR000815" /db_xref="InterPro:IPR001327" /db_xref="InterPro:IPR004099" /db_xref="InterPro:IPR012999" /db_xref="InterPro:IPR013027" /db_xref="GeneID:8021699" /translation="MTQRFDAIIIGTGQAGPPLAARLSGAGLKVAIVERGRFGGTCVN TGCIPTKAMVASAYAARMAQRAAEYGVVIDGGVTVDMRRVKARKDEISGRSSHGVEQW VRGLEHGTVFQGHARFESARAVRVGDELLEAERIFINVGGRALVPPMPGLDQVPFLTN STMMDVDFLPEHLVVIGGSYVGLEFGQMFRRFGSRVTIVEKGPRLIAREDEDVSQAVR EILEAEGIDVQVNADCLSVRRDGAGVVVGLECGSGAREVSGSHLLMAVGRVPNTDDLG LDKAGVEIDKRGNIRVDEQLRTNVPGIWAMGDCNGRGAFTHTSYNDYEIVAANLLDSD PRKVSDRIQAYAMYIDPPLARVGMSLTEAKQSGRTLLVGNRPMTRVGRAVEKGESQGF MRVVVDAQTHEILGASILGVGGDEAVHSILDVMYAKAPYTTISRAMHIHPTVSELIPT LLQSMEPEQ" gene complement(590315..591397) /locus_tag="Rpic12D_4012" /db_xref="GeneID:8021700" CDS complement(590315..591397) /locus_tag="Rpic12D_4012" /inference="protein motif:PFAM:PF01699" /note="PFAM: sodium/calcium exchanger membrane region; KEGG: reu:Reut_B4399 sodium/calcium exchanger membrane region" /codon_start=1 /transl_table=11 /product="sodium/calcium exchanger membrane region" /protein_id="YP_002983935.1" /db_xref="GI:241665576" /db_xref="InterPro:IPR004837" /db_xref="GeneID:8021700" /translation="MALSSNKLPPWTVAAPLLAWVVLAGGAFMTPPGWLIALMALALA SAVFAAVHHAEVVAHKVGEPFGTLVLAIAVTVIEVALIVSVMLSSGPEKAGLARDTVF AAVMLICNGIVGVCLFVGGLRHREQAFQAPGATAALAVLAALVTLTMVLPNYTSSTPG PVMTSSQLAFAGVTSLVLYGCFVIVQTIRHRDYFLVDSANEDVHAPPPPARVAALSAV LLMVSLVAVVGLAKVLSPSVEAAILNAGAPPATVGIVIAALVLLPECLAALRAANADR IQTSLNLALGSALASIGLTIPTVAAVFIWIGRPLELGLGPKEMVLLFLTLIVSSLTLG KGRTTILHGVVHLAIFAAYLFLSIVP" sig_peptide complement(590315..590464) /locus_tag="Rpic12D_4012" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.940) with cleavage site probability 0.307 at residue 50" gene complement(591521..592375) /locus_tag="Rpic12D_4013" /db_xref="GeneID:8021701" CDS complement(591521..592375) /locus_tag="Rpic12D_4013" /inference="similar to AA sequence:KEGG:RS01997" /note="KEGG: rso:RS01997 putative signal peptide protein" /codon_start=1 /transl_table=11 /product="putative signal peptide protein" /protein_id="YP_002983936.1" /db_xref="GI:241665577" /db_xref="GeneID:8021701" /translation="MKTIQTGGRSPAFATLAVASPMGNAKRRFARAACAAFALVSGAL MGAPHASAEALLVPSYIYPSGTGATQWGALATAATSVPTTVILNPNSGPGTTQDANYV AAVAKVHAAGGKVIGYVSSSYANRSLSAVVQDINTYQALYQVDGFFIDEMTADSTTAH IQFYQSVYNYIKGLSPNYTVTGNPGTNVPEIYASLPVADQLVVFEDSAKHYASYAPLA WQANYPTARFAHIVYAASATQMQTFVRNASSKGAAAVFITNKTLPNPYGALPTYWSQE VSATAVAP" sig_peptide complement(591521..591679) /locus_tag="Rpic12D_4013" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.983) with cleavage site probability 0.605 at residue 53" gene 592830..593285 /locus_tag="Rpic12D_4014" /db_xref="GeneID:8021702" CDS 592830..593285 /locus_tag="Rpic12D_4014" /inference="ab initio prediction:Prodigal:1.4" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983937.1" /db_xref="GI:241665578" /db_xref="GeneID:8021702" /translation="MNIRSNVLVIRIVLLTVVSLIASLAATAALAAPPATVASCDGIK DAYPILGTQCANHYAKINHAPATAAERRETYSARIAVLDIFRKALLCNGMYGASKPAQ QRFSSGEAGHLQALANLNAAMTIAGDPNVPVLYTASDLSDVSINKSQCK" sig_peptide 592830..592925 /locus_tag="Rpic12D_4014" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.980 at residue 32" gene 593315..593488 /locus_tag="Rpic12D_4015" /pseudo /db_xref="GeneID:8021703" gene complement(593507..594400) /locus_tag="Rpic12D_4016" /db_xref="GeneID:8021704" CDS complement(593507..594400) /locus_tag="Rpic12D_4016" /inference="protein motif:PFAM:PF03466" /note="PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bcm:Bcenmc03_3757 LysR family transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LysR family" /protein_id="YP_002983938.1" /db_xref="GI:241665579" /db_xref="InterPro:IPR000847" /db_xref="InterPro:IPR005119" /db_xref="GeneID:8021704" /translation="MNNLRRLDLNLLVTLDVLLTEHNVTRAAERLNFSQPSVSVHLAK LRDIFGDPLLLPGPRGMRPTARAESLREPLRLALEALEQAVAPASPFDPAHATNTWRV AATDYGESTIALPVLNTLRTSAPGTRLAMLGLVPTRIEKQAEQGEIDLAFHTTDGAPP GLRRRALFTERYVLIGRAGHPRLKRRPTLAQFCTLDHVIVSPDGGGFFGVTDEALAAA GATRRVVLSVPHFLFVMTAVASTDMVAMLPERLVRGASALQAVEPPVEVPGYEMSMLW HERVHRDPGHQWLRDVIAGAV" gene 594487..595263 /locus_tag="Rpic12D_4017" /db_xref="GeneID:8021705" CDS 594487..595263 /locus_tag="Rpic12D_4017" /EC_number="1.10.99.2" /inference="protein motif:PRIAM:1.10.99.2" /note="PFAM: NAD(P)H dehydrogenase (quinone); KEGG: spe:Spro_2460 ribosyldihydronicotinamide dehydrogenase (quinone)" /codon_start=1 /transl_table=11 /product="Ribosyldihydronicotinamide dehydrogenase (quinone)" /protein_id="YP_002983939.1" /db_xref="GI:241665580" /db_xref="InterPro:IPR003680" /db_xref="GeneID:8021705" /translation="MNVLIVYAHPEPKSLNGALKDFAVQRLEAAGHTVQVSDLYAMQW KAALDASDSTVGPVGPHFHPSLDSKHAFENGLQADDIAAEQAKLQWADAVILQFPLWW FSMPAILKGWVERVYAYGFAYGVGEHSDTHWGDRYGEGTLAGKRAMLIVTTGGWESHY SPRGINGPIDDILFPIQHGILYYPGFEVVPPFVSYRTGRMDDARFAQTTQALGQRLDT LFTTAPIPFRPQNAGEYEIPSLTLRAEIAPEKSGFAAHLA" gene 595373..596155 /locus_tag="Rpic12D_4018" /db_xref="GeneID:8021706" CDS 595373..596155 /locus_tag="Rpic12D_4018" /inference="protein motif:PFAM:PF01925" /note="PFAM: protein of unknown function DUF81; KEGG: rso:RS04702 hypothetical protein" /codon_start=1 /transl_table=11 /product="protein of unknown function DUF81" /protein_id="YP_002983940.1" /db_xref="GI:241665581" /db_xref="InterPro:IPR002781" /db_xref="GeneID:8021706" /translation="MTSHAVFTGLINLLLGMGLGVAGGLLGIGGGLIAIPLLGYLYGM DQHLAQGTALVMIAPNVLIGFWRYHQRHPVHVRSVALICVFSMGATYVAARFAAGLDA NLLHTAFAVFLIVLAVYFASQLKEKPNAAGAAHAVPHTMPAAALPLMGIASGAMSGIF TVGGGLVVVSALVTFFGMPQTRAQGMALALVVPGSLIALAAYAHAGHVDWGTGIPLAA GGVVSVSWGVALAYRFSARRLRLAFCAVLLGTALMMLLVKPA" sig_peptide 595373..595441 /locus_tag="Rpic12D_4018" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.721) with cleavage site probability 0.568 at residue 23" gene 596188..596583 /locus_tag="Rpic12D_4019" /db_xref="GeneID:8021707" CDS 596188..596583 /locus_tag="Rpic12D_4019" /inference="protein motif:PFAM:PF02627" /note="PFAM: Carboxymuconolactone decarboxylase; KEGG: bam:Bamb_5410 carboxymuconolactone decarboxylase" /codon_start=1 /transl_table=11 /product="Carboxymuconolactone decarboxylase" /protein_id="YP_002983941.1" /db_xref="GI:241665582" /db_xref="InterPro:IPR003779" /db_xref="GeneID:8021707" /translation="MSEQDKQAGRARRAQVMGDAFVERAMSGLDAFSAPLQDWLNEHA WGSTWQRDGIDLKTRSLCTCAMLAALGRSTELKGHVRGAINNGATAVEIREVLLHSAI YAGAPAAIEAFRSAREVLNELGIHIEEPR" gene 596605..596823 /locus_tag="Rpic12D_4020" /db_xref="GeneID:8021708" CDS 596605..596823 /locus_tag="Rpic12D_4020" /inference="ab initio prediction:Prodigal:1.4" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983942.1" /db_xref="GI:241665583" /db_xref="GeneID:8021708" /translation="MLTGLTQVAWLGSLPYSRRITFLVDGDKLAYRDAGRKRLTPLGW VLVAIFAAPAALCYWWFKQQFAALGYAG" gene 596836..597645 /locus_tag="Rpic12D_4021" /db_xref="GeneID:8021709" CDS 596836..597645 /locus_tag="Rpic12D_4021" /inference="protein motif:PFAM:PF00561" /note="PFAM: alpha/beta hydrolase fold; KEGG: bpy:Bphyt_4082 alpha/beta hydrolase fold" /codon_start=1 /transl_table=11 /product="alpha/beta hydrolase fold protein" /protein_id="YP_002983943.1" /db_xref="GI:241665584" /db_xref="InterPro:IPR000073" /db_xref="GeneID:8021709" /translation="MDTFDDDLTRFAAHGAEPLPPAVEQGHVEHDGARIWYATFGAGT PVILLHGGLGHGGNWGYQVPALMTAGYRPIVIDSRGHGRSTRDAQPYAYTRMASDVRA VMDALRIDRAAFIGWSDGACVALTLAMQTPERAIGVFFFGCNMDPSGAKPFAPTPVID RCFGRHLKDYTALSSTPDDFDAFVEAVTEMMQTQPNATAEELAATRVPVTIAQSEHDE FIWPEHAHYLARTLPEAQFVLLPGVSHFAPLQRPAVFNDAVRAFLHGICQT" gene complement(597785..598288) /locus_tag="Rpic12D_4022" /db_xref="GeneID:8021710" CDS complement(597785..598288) /locus_tag="Rpic12D_4022" /inference="protein motif:PFAM:PF03061" /note="PFAM: thioesterase superfamily protein; KEGG: rso:RS05225 acyl-CoA thioester hydrolase-related protein" /codon_start=1 /transl_table=11 /product="thioesterase superfamily protein" /protein_id="YP_002983944.1" /db_xref="GI:241665585" /db_xref="InterPro:IPR006683" /db_xref="GeneID:8021710" /translation="MNTQSHQLSMTVLMTPDMANFSGNVHGGHILKLLDQVAYACASR YAGRYVVTLSVDQVVFRQPIHVGELVTFLASVNYTGRTSMEIGIKVVTENIRNQVVRH TNSCYFTMVAVDDDGKPADVPPLAPANAEERERFEAAQQRRALRQEMEARHKAIKATY STPVSGG" gene 598463..598858 /locus_tag="Rpic12D_4023" /db_xref="GeneID:8021711" CDS 598463..598858 /locus_tag="Rpic12D_4023" /inference="similar to AA sequence:KEGG:HEAR1579" /note="KEGG: har:HEAR1579 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983945.1" /db_xref="GI:241665586" /db_xref="GeneID:8021711" /translation="MHRFLTRLLLWLVVLALPLQGLAATTMMARGGALDDTTVAVAML DDGAVMSDACHEHEDAMATGAESKAPAQSHCKTCPICAACSLGSVVPLAASLGVPLIK LPAAAPRGLAVSFRSFIPEALQRPPSIRV" sig_peptide 598463..598534 /locus_tag="Rpic12D_4023" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.993 at residue 24" gene 598955..599296 /locus_tag="Rpic12D_4024" /db_xref="GeneID:8021712" CDS 598955..599296 /locus_tag="Rpic12D_4024" /inference="ab initio prediction:Prodigal:1.4" /note="KEGG: bmj:BMULJ_06269 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983946.1" /db_xref="GI:241665587" /db_xref="GeneID:8021712" /translation="MLFTRWFVAAALLALAPPWVLAQGAGSAPAASPPDPLNADAAVP AVAAPRTFDSYHAYRDTGPAPWRETNAAVSSKSDASADGGHAGHVIPASAPAATSNKP AGESMPGMHHH" sig_peptide 598955..599023 /locus_tag="Rpic12D_4024" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.688 at residue 23" gene 599306..600718 /locus_tag="Rpic12D_4025" /db_xref="GeneID:8021713" CDS 599306..600718 /locus_tag="Rpic12D_4025" /inference="protein motif:PFAM:PF02321" /note="PFAM: outer membrane efflux protein; KEGG: bvi:Bcep1808_3978 outer membrane efflux protein" /codon_start=1 /transl_table=11 /product="outer membrane efflux protein" /protein_id="YP_002983947.1" /db_xref="GI:241665588" /db_xref="InterPro:IPR003423" /db_xref="GeneID:8021713" /translation="MLKPSTRRLALCALAGTLLLLGGCATITQDSGFKTVADVARDRL GKDATWHRSPEARDSAAQRTRELLAQPLTMDSAVQIALLNNRGLQASYAELGLSEAAL VQASRLPNPGFSFKRTRSGDDLSIERTFSLSFLNLLTLPMATRIEGRYFEQTKLLVAN QMLQVATDTRRAYINAVAAEQSARYAEQVQQAAEAGAEFAKRLASAGNFSKLDRAREH AFYAEATATLARTRQQAQAEREALIRLLGVWGTDTGFKLPERLPDLPKDRPELQQIEA YALRNRLDIQAGRLQVDGLASSLGLTQATRFINVLDLGYVRNSKSNEPRETGYEIGIE IPLFDWGGARVARAQSIYMQAADQLADTAVRARSEVRESYVRYQTAYDLTRHYRDEVV PVRKRISDEMLLRYNGMLVSVFELLADAREQVNAVNGYIDALRGYWIAQTDLQMALGG RLPPAEANAATTAPNPPQGH" sig_peptide 599306..599392 /locus_tag="Rpic12D_4025" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.623 at residue 29" gene 600721..602019 /locus_tag="Rpic12D_4026" /db_xref="GeneID:8021714" CDS 600721..602019 /locus_tag="Rpic12D_4026" /inference="protein motif:PFAM:PF07732" /note="PFAM: multicopper oxidase type 3; multicopper oxidase type 1; multicopper oxidase type 2; KEGG: bpd:BURPS668_A0714 multicopper oxidase family protein" /codon_start=1 /transl_table=11 /product="multicopper oxidase type 3" /protein_id="YP_002983948.1" /db_xref="GI:241665589" /db_xref="InterPro:IPR001117" /db_xref="InterPro:IPR002355" /db_xref="InterPro:IPR006311" /db_xref="InterPro:IPR011706" /db_xref="InterPro:IPR011707" /db_xref="GeneID:8021714" /translation="MVSRRQFLGGTGAAMLGAAMVSRAGAASLPEAPLQTKPATQPPL APPNGRPYNPVVTLNGWTLPWRMRGGWKEFHLVAEPVEREFAPGMTGHLWGYNGQSPG PTIECVEGDRVRIFVTNKLPEHTTVHWHGMILPAGMDGVGGLSQPHIPPGKTFVYEFE MKKSGTFMYHPHSDEMVQMAMGMMGLIVVHPKDPAQHRADRDFVFLLAAYDIDPGSYT PRVAEMTNFNMWTWNSRVFPGIDPLPVRLGDRVRIRMGNLTMTNHPMHLHGHTFEVAG TDGGWVQPSARWPEVTTDIAVGQMRAIEFIADNPGDWAFHCHKSHHTMNAMGHNVPTM IGVQQKDLAKKMNALVPDYMGMGQAGMADMGEMEMPLPDNTLPMMTGQGPFGPIEMGG MFTVMKVRRDLPRNSYADPGWYKHPKGTVAYEYTGTSIDD" sig_peptide 600721..600801 /locus_tag="Rpic12D_4026" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.945 at residue 27" gene 602061..602549 /locus_tag="Rpic12D_4027" /db_xref="GeneID:8021715" CDS 602061..602549 /locus_tag="Rpic12D_4027" /inference="protein motif:PFAM:PF00127" /note="PFAM: blue (type 1) copper domain protein; KEGG: pna:Pnap_1260 blue (type 1) copper domain protein" /codon_start=1 /transl_table=11 /product="blue (type 1) copper domain protein" /protein_id="YP_002983949.1" /db_xref="GI:241665590" /db_xref="InterPro:IPR000923" /db_xref="GeneID:8021715" /translation="MQRNLLRSTFLAALMSMAAIAHASGNHAGGHDHGDAAIGEPGDA ARITRMVHVDMTDTMRFTPAQITVQRGETIRFEVVSSGQVRHEMTLGTPADLLAHAEQ MRRHPEMEHADANAVTVDPGQRGEIVWHFTHAGSVEFACLQPGHFEAGMRGAVQVRGN KS" sig_peptide 602061..602132 /locus_tag="Rpic12D_4027" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.935 at residue 24" gene 602585..602911 /locus_tag="Rpic12D_4028" /db_xref="GeneID:8021716" CDS 602585..602911 /locus_tag="Rpic12D_4028" /inference="protein motif:COG:COG5569" /note="KEGG: bmj:BMULJ_06272 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983950.1" /db_xref="GI:241665591" /db_xref="GeneID:8021716" /translation="MFRHALMLTALLVGTPLVHAAEDTAPAPAPAATTPAAMSEGEIR KIDTVAGKLTIKHGPLDNLGMEPMTMVFRVQDPAMLTKVQVGSKVHFVAEKVNGALTV TALDVQ" sig_peptide 602585..602647 /locus_tag="Rpic12D_4028" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 1.000 at residue 21" gene 603212..604309 /locus_tag="Rpic12D_4029" /db_xref="GeneID:8021717" CDS 603212..604309 /locus_tag="Rpic12D_4029" /inference="protein motif:SMART:SM00672" /note="SMART: lipopolysaccharide-modifying protein; KEGG: ftm:FTM_1578 hypothetical protein" /codon_start=1 /transl_table=11 /product="lipopolysaccharide-modifying protein" /protein_id="YP_002983951.1" /db_xref="GI:241665592" /db_xref="InterPro:IPR006598" /db_xref="GeneID:8021717" /translation="MCHSFLRVGATAFRPKSDTLGLNFRGIFCFMRHLKYRLSRVSAK KFWYYFSNASNHFLARATKNGKAETLLKRKSGQRRTQDVFDRLSYYNSISEAFDTSCN AVEYSNFLLKSSTSTIVDKHCEIGSTYFYDLVDLMDYFGPGYSFDYDCGDVTVEPNHP AFVKSRPIKNSSHNGILLKLDAIRHFSLARDPIDFQDKKPMAVFRGPCHQEHRRAFVE RCHDLANVNIGDTRKSELGKATYKSPMTIAEQLQYKFIVSVEGNDVATNLKWIMASNS LCFMRRPRYETWFMEGRLIPDVHYVLLKDDYSDLQEKIEHYRKYPGDALAIVRNANRW VAQFMNRDQERLLGLMVIAKYFRLSGQQSFW" gene 604436..605227 /locus_tag="Rpic12D_4030" /db_xref="GeneID:8021718" CDS 604436..605227 /locus_tag="Rpic12D_4030" /inference="protein motif:PFAM:PF05721" /note="PFAM: Phytanoyl-CoA dioxygenase; KEGG: rso:RS05217 hydroxylase protein" /codon_start=1 /transl_table=11 /product="Phytanoyl-CoA dioxygenase" /protein_id="YP_002983952.1" /db_xref="GI:241665593" /db_xref="InterPro:IPR008775" /db_xref="GeneID:8021718" /translation="MSASAPTATHAHPLSDEQQAFFKEHGYVVLRGFASQQVSAALLA AAQDGLASAAAPVELETDVGYAGAPTSREAEGGQTVRRLLDADSRGTPYTEWARDPRV AAAIAQLIGGPVHLSLAHHNCVMTKHPAFGTATHWHRDSRYWSFARNELVSSWLALVE ETVDNGCLWVIPGSHTLDLPADRFDAKLFLRQEQPENRALIDTARPVPLLPGDVLLFH CNTFHAARANQTAAVKFSAVFTYYGPDNYPLPGTRSSARPDPLVG" gene 605325..605546 /locus_tag="Rpic12D_4031" /db_xref="GeneID:8021719" CDS 605325..605546 /locus_tag="Rpic12D_4031" /inference="similar to AA sequence:KEGG:RS05216" /note="KEGG: rso:RS05216 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983953.1" /db_xref="GI:241665594" /db_xref="GeneID:8021719" /translation="MPIQEVTHGAHVIFVDPLQRDDHRWTARFQICRAGHIICDWENV EMPEGFISAQLALSASVLLADHRLSSLPH" gene 605770..606210 /locus_tag="Rpic12D_4032" /db_xref="GeneID:8021720" CDS 605770..606210 /locus_tag="Rpic12D_4032" /inference="similar to AA sequence:KEGG:RS05215" /note="KEGG: rso:RS05215 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983954.1" /db_xref="GI:241665595" /db_xref="GeneID:8021720" /translation="MSAMFALPRVALALMLATLAASVSAATLTVVVEGAQGRQGAVRA ALFRDAAGWLKPDSAIRADIAALDSVSGASVTFVYPDLPAGRYALSVFHDTNNDGKLG TNPAGIPVEPYGFSRDARGRFGPPAFDDAAIDVQGDQRVTIHLH" sig_peptide 605770..605847 /locus_tag="Rpic12D_4032" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.990 at residue 26" gene 606230..607756 /locus_tag="Rpic12D_4033" /db_xref="GeneID:8021721" CDS 606230..607756 /locus_tag="Rpic12D_4033" /inference="protein motif:PFAM:PF03055" /note="PFAM: Carotenoid oxygenase; KEGG: rso:RS05214 dioxygenase signal peptide protein" /codon_start=1 /transl_table=11 /product="Carotenoid oxygenase" /protein_id="YP_002983955.1" /db_xref="GI:241665596" /db_xref="InterPro:IPR004294" /db_xref="GeneID:8021721" /translation="MQRRSFIAALGAAPFGLTLTDVMAATPDPWAAGFAAARAQYPWL AGYQGVSADMPTRALKVEGRFPPALHGAFYRNGPARHEIGGVRYHHLFDGDGMIQRYD ISEQGVTHRGVFVRTDKFVADTAAGRPLRATFGTANPDMEPVASPDSINVANTSLVMH GDEMLALWEGGSATRVDPDSLRTLGVQTWRDDYKGMPFSAHPKVEPDGTLWNFGVSSA AGLLTVYCVGADAALKRVESVNVPDVAMVHDFAVTQRHLVFLLPPFVYDVERSHAGMS FLDSHVWRPELGMRVLVLDKDDITRMRWLKLPEGFVFHLGNAWSSPDGQEIHLDYLRS DDASVVITSLRELMRGQIRPSPGARLTQVQLNLRTGRAEQFSTAHVAEFPKIDTRRTA QRHRALFMVAHTAPLSNGSPHALHGFDTVMRVDTDSGQAEQYRFGHRTLVEEHVFVPA SASAREGEGWLIGTVFDVDAGCTRLTAFDAQHVAAGPVATASLNGVAPLGLHGLFRAA" sig_peptide 606230..606304 /locus_tag="Rpic12D_4033" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.997) with cleavage site probability 0.984 at residue 25" gene complement(607769..609403) /locus_tag="Rpic12D_4034" /db_xref="GeneID:8021722" CDS complement(607769..609403) /locus_tag="Rpic12D_4034" /inference="protein motif:PFAM:PF07687" /note="PFAM: peptidase dimerisation domain protein; peptidase M20; KEGG: dac:Daci_1258 peptidase dimerisation domain-containing protein" /codon_start=1 /transl_table=11 /product="peptidase dimerisation domain protein" /protein_id="YP_002983956.1" /db_xref="GI:241665597" /db_xref="InterPro:IPR002933" /db_xref="InterPro:IPR011650" /db_xref="GeneID:8021722" /translation="MVKKVWYAHTHPELFDQRSVQMPLQPAARQTTAHRASHRLRVLV PALMLGATGLAGAAELSSADAERHAQATYREYFQLLSLPNDAIVPEDVRKNADWLEQA FRKRGFTTKQLANNGKPMLYAELPNPDAGRKTVLFYMHLDGQPVIPAQWAQKSPWTPV LKHKTAQGDWEEIDAAQLFSGPLDPEWRVFGRSSADDKGPIMMMLAAIDALKASGAQP AVNVKIILDSEEEKGSPSISKVMQANRELLRCDAIVIHDGPMHASNLPTLVFGNRGAA EARLTVYGAKVPLHSGHYGNYARNPAQQLANLLASMKNDAGRVTVPGYYDHVKISEAD RKIMAAVPDDQAALNKRLGIAHADKVGANYQEAMQYPSLNVRGMASAAVGDKVANIVP DKAVAELDLRTTPDSSAAYLGKLIERHIERQGYHLVKNAPTDEERSRYDKLATFTYQS EGADAAGSPIDSAVGTWAYRSLTDTFGANPAPVRIRMMGGTVPTAEIVGVLQVPFAII PLVNADNNQHAANENLRMGNYVGGVRTIYGLLTHPL" gene 609471..610388 /locus_tag="Rpic12D_4035" /db_xref="GeneID:8021723" CDS 609471..610388 /locus_tag="Rpic12D_4035" /inference="protein motif:PFAM:PF03466" /note="PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cti:RALTA_B2078 putative transcriptional regulator, LysR family" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LysR family" /protein_id="YP_002983957.1" /db_xref="GI:241665598" /db_xref="InterPro:IPR000847" /db_xref="InterPro:IPR005119" /db_xref="GeneID:8021723" /translation="MSSHRLQETSLRYFLEVVRSGSLTEAAARLHVSASAISRQVAML EELLGVPLFERQSRGMRPSAAGELLAAHALRGALEAERVVSDIQGLQGLQRGRVRIAC SDGFAIEFVPRAIVAFRERHPGIQFDLRAEEPMRVTEAVLRGDVDIGLTYSRAAVHGI RVAYQQRGSVFAIMRPDHPLAKFNSVTLAQMHPFPIALSGPDNTVRQLFDMGCSQRGL VFEPVLVSNRFDGLLSFVLQGGGLGIAGEITVRERVQRGELHAAEIRERGMRGRTVEL QILAGRTLPEVVRVFLDFLREALPEQPPR" gene complement(610405..611886) /locus_tag="Rpic12D_4036" /db_xref="GeneID:8021724" CDS complement(610405..611886) /locus_tag="Rpic12D_4036" /EC_number="3.2.2.4" /inference="protein motif:TFAM:TIGR01717" /note="KEGG: rso:RSp0214 AMP nucleosidase; TIGRFAM: AMP nucleosidase; PFAM: purine or other phosphorylase family 1" /codon_start=1 /transl_table=11 /product="AMP nucleosidase" /protein_id="YP_002983958.1" /db_xref="GI:241665599" /db_xref="InterPro:IPR000845" /db_xref="InterPro:IPR011271" /db_xref="GeneID:8021724" /translation="MTDTRATAHLYPAHDLAICTDANTAVERITAIYERSAQAVRDRF HAFARGEDCSEDLSACYPYLGITVDPKTLVSDARPAWGTVAYPGVYGTTLTRPDLFRD YYRVQIERLLHYHNSPVVVGVSNRPIPLPFVVEASTVDITPEQARALGGAFTLPDLAQ IDDSIANGTYRPIGDEPQPLSMFTAERVDLALQRLYHYTATHPKHFQRFVLFTNYQRY VDEFAALGRKLMEDGNDEGYIRFVEPGDTEHELGTPAPDDSHRIKGLPQMPAYHLVRE DRLGVTLVNIGVGPSNAKTITDHLAVLRPHCWMMIGHCGGLRRSQQLGDYVLAHAYVR DDHVLDQDLPPWVPVPPIAEIQVALQEAVARITGLSGADMKSRMRTGTVVSTDDRNWE LKYQALYSRFNQSRAIAIDMESATIAANGFRLRVPYGTLLCVSDKPLHGELKLRGMAN LFYRQRVSQHLDIGMEAVRLLRESGVEALHSRKLRSFDEPAFR" gene complement(611934..612707) /locus_tag="Rpic12D_4037" /db_xref="GeneID:8021725" CDS complement(611934..612707) /locus_tag="Rpic12D_4037" /inference="protein motif:TFAM:TIGR01726" /note="TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: reh:H16_B2488 ABC-type transporter, permease component" /codon_start=1 /transl_table=11 /product="polar amino acid ABC transporter, inner membrane subunit" /protein_id="YP_002983959.1" /db_xref="GI:241665600" /db_xref="InterPro:IPR000515" /db_xref="InterPro:IPR010065" /db_xref="GeneID:8021725" /translation="MTTEAVLLHLRYLLIGPYPNGPLAGAALTLWMALWACVMATAAG VGCALLLDRLDATPGLRRLARLLRGLLATLRAIPVLMLMFWAYFLIPMALGVSVPETA TVVAALAAVGAAYITQSMEAGLRAVGAGQRNAALALGMSPPQALLTVVLPQAWRIMLP SLANQWVSTVKDTSLAYIVGVVELSTAASQVNSRTVAYPAEVFGAVAVLYFLLCTGIE ALPNWLRAGPRTPAAQPDHMSTWQRFLRWRERPVSDAVT" gene complement(612704..613396) /locus_tag="Rpic12D_4038" /db_xref="GeneID:8021726" CDS complement(612704..613396) /locus_tag="Rpic12D_4038" /inference="protein motif:TFAM:TIGR01726" /note="TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: reh:H16_B2489 ABC-type transporter, permease component" /codon_start=1 /transl_table=11 /product="polar amino acid ABC transporter, inner membrane subunit" /protein_id="YP_002983960.1" /db_xref="GI:241665601" /db_xref="InterPro:IPR000515" /db_xref="InterPro:IPR010065" /db_xref="GeneID:8021726" /translation="MTLLVSAAAIAGGLAIGLLLTALRASAQPWLHLPARALVAFLRK TPLLVQLFFWYFGAAQLLGEDVVGAIIGWGGIAVGAWRLPAPSFEFLAAAFGIALYAG AFFSEELRAGIRAVPRGQREAALSLGFTPRAAFLRVVLPQALRVSALPLLGQCANTIK NTSLAMGIGLAELAYSARQVETDTLLAFQAFAVATVLYAGVILLLQWVAPRVLRRLGW TSTSTLPDGAPA" sig_peptide complement(612704..612787) /locus_tag="Rpic12D_4038" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.982 at residue 28" gene complement(613468..614355) /locus_tag="Rpic12D_4039" /db_xref="GeneID:8021727" CDS complement(613468..614355) /locus_tag="Rpic12D_4039" /inference="protein motif:PFAM:PF00497" /note="PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: reh:H16_B2490 ABC-type transporter, periplasmic component: PAAT family" /codon_start=1 /transl_table=11 /product="extracellular solute-binding protein family 3" /protein_id="YP_002983961.1" /db_xref="GI:241665602" /db_xref="InterPro:IPR001638" /db_xref="GeneID:8021727" /translation="MQASVSGAFSLQGLTQALRKLSRQAVGVVIGAALAVAVLHAPQA HADKLDDIKKAGVLRVGVFDANPPFGYADAKTGQPVGLDVDYAQEIANKLGVKLELRA TNPANRVPLLTSGKVDIVAANFTITDERKKQIEFSTPYFASGLQFIARKGVLKQPDDL KRDGIRLGVDKGTTQETTLRDGYPKARVIAYDDSPLALTALRTGAIQAFAQDGAKLGA LLATLPNRSELEISPFVLTREYMGIGVPKGETKLTATIDQILQGLEKDGTAGRIYDRW FGPKSAAPLPRDFIIGSTK" sig_peptide complement(613468..613608) /locus_tag="Rpic12D_4039" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.902) with cleavage site probability 0.900 at residue 47" gene 614672..616321 /locus_tag="Rpic12D_4040" /pseudo /db_xref="GeneID:8021728" gene 616454..616960 /locus_tag="Rpic12D_4041" /db_xref="GeneID:8021729" CDS 616454..616960 /locus_tag="Rpic12D_4041" /inference="similar to AA sequence:KEGG:Reut_B3507" /note="KEGG: reu:Reut_B3507 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983962.1" /db_xref="GI:241665603" /db_xref="GeneID:8021729" /translation="MPTGQSIATVVDHYLRNAELPEAISAQQTFQHAFDVYLKDSNAY ANTYFARYFEWQGVVRERWFHECIDADLLMSGRVIFVTKLAHQEFVEETFPFQRVECH LNTFRVQPCSFYMVFRFVSGGRLVSLGYQQVVCANAERVIQRLPEHVRMRVKAYELDT LPELAHAS" gene complement(616980..618365) /locus_tag="Rpic12D_4042" /db_xref="GeneID:8021730" CDS complement(616980..618365) /locus_tag="Rpic12D_4042" /inference="protein motif:PFAM:PF02518" /note="PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: rso:RS05203 two-component transmembrane sensor histidine kinase transcription regulator protein" /codon_start=1 /transl_table=11 /product="histidine kinase" /protein_id="YP_002983963.1" /db_xref="GI:241665604" /db_xref="InterPro:IPR003594" /db_xref="InterPro:IPR004358" /db_xref="InterPro:IPR005467" /db_xref="GeneID:8021730" /translation="MYALFPAFVSSLFLFYGVYVVTTRGRTRASLAFLGMTTLTCLWQ GIWAFLFQTHDIGTAQVLAKLGWIAILVMPTMLYHFAVEVAEAPSERPSLLAAYALDA ALIALLLTTNLVIDGVHQFHFGFYPRAGVLEAVHIAQTVVLVTRGMWVLYREQRHATA EKRKRLLTCLFGVGLISLAAADYAVNYGIAFYPPGVLPLAVALGIIAVGVVKFDLMRP YALAATVAHEVRTPLTTIRLQAAEIARAWPDVYRGYQLAIDNGLCQPPQHPAMLDRLS KLAGAITSEVASAHSVIEMALASVTLERLDRRTFAAHSLRECVETAVAQYPFQAGERE RVHVQPFNADWRFVGSDTLLVYVLFNLLKNALHAIQIARKGHIEISARQDGDSYVLVV RDSATGIPPSVQRRIFDPFFSTKHVGKGSGVGLTFCRRVMQAFGGRIQCESVVGEYTL FSMRFPQPPAI" gene complement(618591..619343) /locus_tag="Rpic12D_4043" /db_xref="GeneID:8021731" CDS complement(618591..619343) /locus_tag="Rpic12D_4043" /inference="protein motif:PFAM:PF08241" /note="PFAM: Methyltransferase type 11; UbiE/COQ5 methyltransferase; Methyltransferase type 12; KEGG: afe:Lferr_0774 methyltransferase type 11" /codon_start=1 /transl_table=11 /product="Methyltransferase type 11" /protein_id="YP_002983964.1" /db_xref="GI:241665605" /db_xref="InterPro:IPR004033" /db_xref="InterPro:IPR013216" /db_xref="InterPro:IPR013217" /db_xref="GeneID:8021731" /translation="MQQHRLVDQQFGQVAQAYLTSAVHAQGADLDALAALAQSAPHAK VLDLGSGGGHVSFAMAPHVAAMVAYDLSEDMLGVVAAEAARRGLAQLHTQAGRAENLP FDDAAFDIVATRFSAHHWYDVRKGLSEARRVLKPGGKLVIVDIVAPEVPLLDTLLQTA EVLRDASHVRDYRVSEWQAMLAEAGFQPGTPRTWKLMMAFDSWIARIRTPQVRADAIR DLFDRAADEARAYFAVAPDHSFAIDAMLIEAT" gene complement(619462..620382) /locus_tag="Rpic12D_4044" /db_xref="GeneID:8021732" CDS complement(619462..620382) /locus_tag="Rpic12D_4044" /inference="protein motif:PFAM:PF04909" /note="PFAM: amidohydrolase 2; KEGG: rso:RS05190 hydrolase transmembrane protein" /codon_start=1 /transl_table=11 /product="amidohydrolase 2" /protein_id="YP_002983965.1" /db_xref="GI:241665606" /db_xref="InterPro:IPR006992" /db_xref="GeneID:8021732" /translation="MPTRRAFNTGLLAMLGSTALAGCAATGNSDATRGTSAGITAIDT HAHVFERGLPLADARRYAPTYDAPLPAYLAQLDAHGVSHGVLVQPSFLGVDNSYLLAA LKQAPQRLRGVAVIDPAAPETLLAQMNAEGIVGIRLNLIGAADPQLKSPVWQASLARL HALGWHVELHVEARRLPALLQPLQEAQVNVVVDHFGRPDPALGVDDPGFAALLAAGRS RRVWVKISGAYRNGANGRGEAIAQAAMPRLKDALGLDRLVWGSDWPHTQFESQIDYDK MWAFAGVLLPSAADRKQVLVDTPAQLFRFG" sig_peptide complement(619462..619536) /locus_tag="Rpic12D_4044" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.598 at residue 25" gene complement(620438..621685) /locus_tag="Rpic12D_4045" /db_xref="GeneID:8021733" CDS complement(620438..621685) /locus_tag="Rpic12D_4045" /inference="protein motif:PFAM:PF07690" /note="PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: rso:RS05189 metabolite transporter" /codon_start=1 /transl_table=11 /product="major facilitator superfamily MFS_1" /protein_id="YP_002983966.1" /db_xref="GI:241665607" /db_xref="InterPro:IPR005828" /db_xref="InterPro:IPR005829" /db_xref="InterPro:IPR007114" /db_xref="InterPro:IPR011701" /db_xref="GeneID:8021733" /translation="MFGWFKEISKGEKRTFWACFGGWALDALDVQMFSLVIPTIIAAW HIGKAEAGLVSGITLVASALGGWIAGALTDRFGRVRTLQITVLWFSLATFASAFAQNF EQFLVLKAIQGFGFGGEWAAGAVLMAESIRASHRGKAMGTVQSAWAVGWGAAVLLYAL TYSFIEPDLAWRVMFAAGLLPALLIIYIRRGVQEPVPAATPDANANAMPISRFPLLDI FRPQVLRMTLIGGLLGVGAHGGYYALMTWLPTYLKTERHLSVLGTGGYLAVIIFAFWC GCVASAWLLDVLGRRGNILLFSCCCVVTVLVYLLVPLSDGAMLVLGFPLGFFAAGIPA SMGALFNELYPQGVRGTGVGFCYNFGRVVSAAFPVLVGKMSASMSLGTAIGIDAAIAY SIVAVAVLMLPETKGRDLAAVTV" gene complement(621821..624643) /locus_tag="Rpic12D_4046" /db_xref="GeneID:8021734" CDS complement(621821..624643) /locus_tag="Rpic12D_4046" /inference="protein motif:TFAM:TIGR02401" /note="KEGG: rso:RS05188 putative maltooligosyl trehalose synthase transmembrane protein; TIGRFAM: malto-oligosyltrehalose synthase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain" /codon_start=1 /transl_table=11 /product="malto-oligosyltrehalose synthase" /protein_id="YP_002983967.1" /db_xref="GI:241665608" /db_xref="InterPro:IPR006047" /db_xref="InterPro:IPR006589" /db_xref="InterPro:IPR012767" /db_xref="GeneID:8021734" /translation="MSELTTPPAPVTLQRVPRATVRLQLHRDFTFDHARALLDDFAAL GISHLYTSPITTAQPGSTHGYDVVDPTHVNPELGGERALEQLVDALHARGMGLVVDIV PNHMGVGGAHNTWWLDVLESGPESTYANFFDIDWQPPNPALRNKVLAPFLGENYADAL AGGRLQLTYDDTAARLAIAYYDHRFPIALADYAALLRAGNADTATHAVADRFAALGTI RSLRTRRERADEARDALRNLATTEAGAAHIAEAVRTLNAQPDQLDALMARQHWRLAHW CTANDEINWRRFFDIGSLAGLRMERAEVFEATHALLFRLYRLGWIDGVRIDHVDGLAD PAAYCRQLRRRLQDEHAARPADRLTNHPWIVVEKILASDEPMRTDWGVDGTSGYDFMN QVGALLHDAHGETALTQGWLEWIGAPVADAPFSATTAPARRQILHVHFAAELDSATSA LHAVAQQNHSSHDVTWHAIRRALAEVIVHFPVYRTYANAQQRDAQDSAILQTAMSRAA TCLRRVDQPVLGWLDAWLGGQPAGQDKLRQLALRRCQQLSSPVAAKAVEDTACYRYGR LLSRNEVGANPGEFSMSANAFHHAMQARAHTWPHAMLTTATHDHKRGEDVRARLAVLS ERPTQWLAAAHQWRAEHAAWVQKLPAGPAPSPAAQWMLYQTLVGIWPADLDWHDADAV RELAERVAQWQEKAQREAKLRTDWFAPDADYEAASRNFVFTLLTGEAAPTFLPSLCAF VQSVAPAAAINGLVQTLLRTTLPGVPDLYQGADFWDTSLVDPDNRRPVDYAARHRALR ALHLHAGHGLASLLAHWTDGRIKQAVLARALALRAALPAVFESGDYQPLAVTGSGAQH VLAFARVHGANAIIVIVPLHASALLGHAPAPTFADGAWRDTTVCLPSTLSHLPLHNAF DGQTLHSPRLALGQVLAHLPVALLHT" gene complement(624640..626922) /locus_tag="Rpic12D_4047" /db_xref="GeneID:8021735" CDS complement(624640..626922) /locus_tag="Rpic12D_4047" /EC_number="2.4.1.25" /inference="protein motif:TFAM:TIGR00217" /note="KEGG: rso:RS05187 putative 4-alpha-glucanotransferase (amylomaltase) protein; TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77" /codon_start=1 /transl_table=11 /product="4-alpha-glucanotransferase" /protein_id="YP_002983968.1" /db_xref="GI:241665609" /db_xref="InterPro:IPR003385" /db_xref="GeneID:8021735" /translation="MDRTTNLSGTPRTPLQQLATDAGLLVDWEDAASRPMRVADEVLR AVLFTLGLPAGTPAQVSESQARLRAEAEAVAIPPLVTGVVGQPIVLQTSAPQAALLDG QPYRVDFESDGSTEGRISVSASEHHATLRLAAVQAVGYHRLTIDAGPGTVIEATLAIA PARCYGVADALRQHDRPTDSRLWGASAQLYGLRCDAERAASSAGLGDYTAAGTLARHL SQRGADALALSPVHAMFTADPRRYSPYSPSSRLFLNAWMIDPAALFGNETVRQAVVDC NLVADYARLEAAPLIDWPASGNARMTVLRALHRRLLQAPLGDTIGQTLLDDFRAYCIN GGASLRDHAHFEALNAHLGPAHWKQWPAQYQDPSYLGVQAFAREHEDAVNFHLFLQWA AARQWAIAQRTAEGAGMAIGLVADLAVGTDSAGSHAWARQRDLLIGVTVGAPPDVFNA QGQGWGLTTFSPRAMRTQGFSAFIEMLRAVMAVPGGVRIDHVLGLMRLWVIPDGARPL DGVYLRYPMQDLLRLVALESWRNRCIVIGEDLGTVPAGLRDKLADDGLLGMRILWFER EYTRDDAPFKAPRTWAPASVAMTSTHDLPTLVGWWIGNDLRWQAQLGLLPAGMSESEA HARRMDDRAALVAAFAEHNRLVLADGGVPMIGVASLQAALEQTRVATAAQAEVILQAS AQDFATAATVFTGAANTPLALVPLEDLLGLVEQPNLPSTIDTHPNWRRRLPGPAGTLI EAPTVLARLSALANARNSMS" gene complement(626961..628802) /locus_tag="Rpic12D_4048" /db_xref="GeneID:8021736" CDS complement(626961..628802) /locus_tag="Rpic12D_4048" /inference="protein motif:TFAM:TIGR02402" /note="KEGG: rso:RS05186 putative maltooligosyl trehalose trehalohydrolase protein; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein; SMART: alpha amylase catalytic sub domain" /codon_start=1 /transl_table=11 /product="malto-oligosyltrehalose trehalohydrolase" /protein_id="YP_002983969.1" /db_xref="GI:241665610" /db_xref="InterPro:IPR004193" /db_xref="InterPro:IPR006047" /db_xref="InterPro:IPR006589" /db_xref="InterPro:IPR012768" /db_xref="GeneID:8021736" /translation="MTAPAPRFAHDMPFGATVLADGNTRFRLWAPDATAAWIDIDDTR GNESIRMDAEPDGWYAAVAPVGSGTCYRYRLTNRDGVTLSVPDPAARAQWQDIPGPSL VVDPQRYRWQHADWQGRPWHETVLYELHVGALGGFKGVRGRLPELARLGITAIELMPV AEFPGARNWGYDGVLPFAPDASYGTPDDLKALIDTAHGLGMMVFLDVVYNHFGPDGNY LHHYARSFFRDDVHTPWGAAIDFRKPQVREFFIQNALMWLMEYRFDGLRLDAVHAITE RDWLGELAARVRLSAEPGRHVHLVLENEHNAASLLRDGNTHGDFDAQWNDDGHNVLHV LLTGEREAYYAAYADAPAQRLARVLQDGFCYQGEPSPIHDNAPRGEPSAHLPPTAFVL FLQNHDQIGNRAFGERLTQLAHPDALHAAQVLLLLSPQIPMLFMGEEWGSTCPFQYFT SHHGMLAEAVREGRRREFAKFEAFADPHQRERIPDPNEELTYLASCPGEANLAEPAQL NTLNRMHRLLALRHAEIIPRLPHARALDAVALGHAGAIARWRMGDGSVLTLMLNLADQ PVAVPTVLAGSPADLLHESREGAAAALITHRLPERACVALLHTPSPG" gene complement(628799..631099) /locus_tag="Rpic12D_4049" /db_xref="GeneID:8021737" CDS complement(628799..631099) /locus_tag="Rpic12D_4049" /inference="protein motif:TFAM:TIGR02100" /note="KEGG: rso:RSp0238 glycogen operon protein GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain" /codon_start=1 /transl_table=11 /product="glycogen debranching enzyme GlgX" /protein_id="YP_002983970.1" /db_xref="GI:241665611" /db_xref="InterPro:IPR004193" /db_xref="InterPro:IPR006047" /db_xref="InterPro:IPR006589" /db_xref="InterPro:IPR011837" /db_xref="GeneID:8021737" /translation="MLRFPKTLSPGKPFPLGAQWDGLGINFAVFSANASKIELCIFDP AGRKELTRFALPECTDEVWHGYLPGVEAGLVYGYRAYGPWEPQHGHRFNPHKLLLDPY ARRLVGALRWSDALFGYRLNSNRGDLSFDRRDSAPAMPKAVVTDESFNWGNDIRPNTP WSRTVIYEGHVRGMSMLREDLLPPERGTFSALGDSVFIERLQRLGITAIELLPIHAFL QDQFLVERGLRNYWGYNTLCFFAPEPSYLSAPSLHELKVAIRRLHAAGIEVLLDVVYN HTCEGSELGPTLSFRGLDNASYYRLVPGQERYYINDTGCGNTLNLSHPRVLQMVMDSL RYWVNAFHVDGFRFDLGVTLGREGNGFDPGSGFFDAIRQDPVLSTVKLISEPWDVGPD GYQVGNHPPGFAEWNDRFRDGIRRFWRGDSGQRPDLAARLTGSGDMFDRRHRRPWASI NYVASHDGFTLHDLVSYADKHNDANGEDNRDGHNDNCSANWGTEGPTQDPAIQALRER VTRALLATVFFSNGTPMLLAGDEFGRTQDGNNNAYCQDNALSWLDWSLLQKDPGQALA RYTARLIALRKASPALRWPHYVHGNTEILPGVPDIAWFDERGQTLSPDAWNDSEARAL ALRRACVETIDAEARPHVALLLINGAATDLTFTLPEPAMDWLLAIDSAAPEQDARPHS GGTLNVAGRSVVLLLATQLATIAQIAGQPDADASGETLGHVPDAHNAAQNALQNATPE QPASDDERTAPTAGQAASDANGDATR" gene complement(631691..633997) /locus_tag="Rpic12D_4050" /db_xref="GeneID:8021738" CDS complement(631691..633997) /locus_tag="Rpic12D_4050" /inference="protein motif:TFAM:TIGR01515" /note="KEGG: rso:RSp0239 glycogen branching enzyme; TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: alpha amylase all-beta; glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain" /codon_start=1 /transl_table=11 /product="1,4-alpha-glucan branching enzyme" /protein_id="YP_002983971.1" /db_xref="GI:241665612" /db_xref="InterPro:IPR004193" /db_xref="InterPro:IPR006047" /db_xref="InterPro:IPR006048" /db_xref="InterPro:IPR006407" /db_xref="InterPro:IPR006589" /db_xref="GeneID:8021738" /translation="MTALDFATPTKTAAEPEAPVVLPPGLDQMQVDALTHGRLGDPFA VLGPHRLDTEDGPRWVVRAFYPGARRVQAIDSRGQIITEMTPVGRTGLFHGPLRADAQ DVYGHPELYRLRVIWPAGTGHEAVQETEDPYAFGLLLGDLDMHLLNEGTHWALASCLG AQAMRIDGISGVRFAVWAPNAQRVSVVGEFNQWDGRRHPMRLRHQAGVWELFLPSGLG VGPGARYKFELIGADGRLMVKADPAARQTEPPPATASVVADPAPLRWNDDAWMQTRAE RQKPDAPISIYEVHAGSWLRDLEDGGRNLQWDELADRLIPYVTALGFTHIELLPVAEH PFGGSWGYQPLGLFAPSARFGAPEAFARFVDRCHQAGLGVIVDWVPAHFPTDAHGLAQ FDGTALYEHQDPREGFHQDWNTLIYNFGRNEVRGFLIASGLEWLERFHIDGLRVDAVA SMLYRDYSRRAGEWVPNRYGGRENLEAVAFIQKMNTVVHERCPGAITIAEESTAWPGV TAPVEFNGLGFDYKWNMGWMHDTLHYMQRDPVYRQHHHDGMTFGLVYAFSEHFILPIS HDEVVHGKGSLLGKMPGDEWQRLANLRAYLAFMWTHPGKKLLFMGCEFGQVGEWNHDA SPEWHLLDDPRHRGVQRLVHDLNALYRNEPSLHARDTAPEGFNWVIGDDRTNSVFAFL RLDGEGRPMLVVANMTPVPREGYRIGVPPADGATQWREVLNTDAAVYGGSDFGNGGAV DVDHVAAHGQEQSLVLRLPPLGVVVLKV" gene complement(633994..637488) /locus_tag="Rpic12D_4051" /db_xref="GeneID:8021739" CDS complement(633994..637488) /locus_tag="Rpic12D_4051" /inference="protein motif:TFAM:TIGR02456" /note="KEGG: rso:RS05183 hypothetical protein; TIGRFAM: trehalose synthase; trehalose synthase-fused possible maltokinase; PFAM: alpha amylase catalytic region; aminoglycoside phosphotransferase; SMART: alpha amylase catalytic sub domain" /codon_start=1 /transl_table=11 /product="trehalose synthase" /protein_id="YP_002983972.1" /db_xref="GI:241665613" /db_xref="InterPro:IPR002575" /db_xref="InterPro:IPR006047" /db_xref="InterPro:IPR006589" /db_xref="InterPro:IPR012810" /db_xref="InterPro:IPR012811" /db_xref="GeneID:8021739" /translation="MTRNPTALLVDDALWYKDAVIYQLHVKSFCDSDNDGVGDFPGLI SKLDYIAELGVDVIWLLPFYPSPRRDDGYDIAEYRGVHPDYGNMADVRRFIAEAHARG LRVITELVINHTSDQHPWFQRARRAKPGSALRDFYVWSDNDKRYAGTRIIFIDTEPSN WTWDPVANAYYWHRFYSHQPDLNFDNPRVLKAVIGVMKFWLNLGVDGLRLDAVPYLVE REGTSNENLPETHEVLRKIRAAMDGEFKNRLLLAEANQWPEDTQEYFGAGDECHMAFH FPLMPRMYMAIAREDRFPITDIMRQTPEVPAGCQWAIFLRNHDELTLEMVTDAERDYL WEVYASDRRARLNLGIRRRLAPLLERDRRRVELMNSLLFSMPGTPVMYYGDEIGMGDN IHLGDRDGVRTPMQWSPDRNGGFSRADPEQLVLPAIMGSLYGYESVNVEAQSRDAHSL LNWTRRLLATRKRHRVFGRGSIQFLQPSNRKVLAYIRALEGEAPILCVANLSRASQAV ELDLSTFAQRVPVELIGGTAFPPIGQLSYLLTLPPYAFYWLELRENEPGPTWSQPAAE QLPEFTTLVLRAGLDALADTRQREAHRQLIEREILPTYLPKRRWFAAKDSVLRSAKFA WGAPVPVDAASTNRPLAGATRPEVFLNEVAVTLGSPDGTERVERYLLPLSIAWESATL PALPIQLALARVRRGRHVGYLTDAFTTETFARALLTNLVRGTTLEANDGTVHFEPEPN IAELAEPAGAPEAGSTRPAPLPLAPDTPIQWLAAEQSNSSLVIGESVIVKLIRRIATG IHPEVEMTRHLTRVGYANTAALIGEVSHHAADGERATLAVMQSFVPNQGDAWTWALDY LRRTIDELAVQMEGVTTGDGESSPVAVSEARVDTDEALAGYVNFIGVIGTRLGELHAA LAAPTEDPNFGARIADADDATYWIARVSEQLTRAHDNLTAWQRQNPDSARQPDVQWLL SQHQALLDAARAHAENGLGATLSRIHGDFHLGQVLVAQGDAFLIDFEGEPSRPVEERR RKTSPLRDVAGLMRSLDYVVGAMRQGPDHVAGPAQERRNVLLERFRAASTERFLEAYA AAIRGPDLNALDQPVVDFHLLDLFLLEKAAYEVNYEASNRPTWLPIPLEGFTRVARRL LHAEPPSPAAEDPTGGPP" gene complement(637485..641075) /locus_tag="Rpic12D_4052" /db_xref="GeneID:8021740" CDS complement(637485..641075) /locus_tag="Rpic12D_4052" /inference="protein motif:PFAM:PF00128" /note="PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: rso:RS05182 putative alpha-amylase-related protein" /codon_start=1 /transl_table=11 /product="alpha amylase catalytic region" /protein_id="YP_002983973.1" /db_xref="GI:241665614" /db_xref="InterPro:IPR006047" /db_xref="InterPro:IPR006589" /db_xref="GeneID:8021740" /translation="MPETKSPKPATSRKTTAALKAAKPPGSKAKSATKPTAMPSERPP AATQPPYAPAICYVHPLQLGRLDRWDGVLDRIASLGFDHVLMAPPFAVGAAGNVFVTR DHAQLHAALGGGPADAALATLAEGCRARGLTLQLDLVIDRVAIDAPLRADHPDWFASH AEDGDALDPRLPPSHLEVASFRHDDPRCADAILMWWTQQLRAWAALGIGGFRCEAPAR LPAARWRTLIADVRKDVGVIRFLAWTPGMDGAAVDALAGAGFDATFSSLRWWDFRAGW MVEEHARLAAVAPPIAAVEAPFGTRYGQAFGDAMIRERAYRRLLHVADTLDAGWLMPL GFERGALLPMLAERGDPSDQQWIDAHAAFDLSDAVRDVNATIRAARETNTVAPHAELR MLTGPDAPATALLRADGPDLRAGDAATLTVINPDLYMGVSVHADHFLPGVAGGFTRGV ALDLLTEPVGSCDDTLRARARPLAEIDLLPGDVQVWRVFRNAPVRTPAAVKPAKSLRT KAGEAKEPVNAAIASPRIGIEQVQPSVEDGRFAVKRLVGDDIIVEADVLMDGHDKLAV HLLWRAQDEDTWQHVPMMPLGNDRWRGAFRPERLGRHVYAVAAWRDAFGTYRSELEKK HTAGVEVTLELEEGARLVALAAEHAPNDAPVDALHKLARLLAEADQAHRLKLLLDPVT EHVMAQASHYRPFYVESVAYPLDVERAGAAFASWYKLFPRSASDDEQRHGTFDDVIRR LGAIRGMGFDVLYFPPIHPIGRTNRKGRNNSLRAEPDDPGSPYAIGATEGGHDAIHPQ LGTLEDFRRLMRAAREKGLELALDFAIQCSPDHPWLREHPGWFAWRPDGSIKYAENPP KKYEDIVNVDFYADDAKPGLWTALRDVVMFWADEGVRLFRVDNPHTKPLPFWEWMIGE VRARYPDTVFLSEAFTRPKVMYRLAKVGFSQSYTYFTWRHTKQEFIDYLTELTRTPVR EYFRPHFFVNTPDINPVFLQTSGRPGFLIRAALAATLSGLWGVYNGFELCEGAAVPGK EEYLDSEKYQLRAWDHNRPGNIVKEIALLNRIRRANPALHSHLGVTFQPASGDRILFF SKSTPPVLPAQLETSQAEPANALSPDRFGDNTVFVAINLDPHHAHESDIELPLWQWGL PDHGALMAENLVNGQRTVWRGKWQHIRLEPEHPFAIWRVRPALPSEEQPS" gene complement(641107..642738) /gene="glgA" /locus_tag="Rpic12D_4053" /db_xref="GeneID:8021741" CDS complement(641107..642738) /gene="glgA" /locus_tag="Rpic12D_4053" /inference="protein motif:TFAM:TIGR02095" /note="TIGRFAM: glycogen/starch synthase, ADP-glucose type; PFAM: Starch synthase catalytic domain protein; glycosyl transferase group 1; KEGG: rso:RSp0242 glycogen synthase" /codon_start=1 /transl_table=11 /product="glycogen/starch synthase, ADP-glucose type" /protein_id="YP_002983974.1" /db_xref="GI:241665615" /db_xref="InterPro:IPR001296" /db_xref="InterPro:IPR011835" /db_xref="InterPro:IPR013534" /db_xref="GeneID:8021741" /translation="MTLSLNVLFVASEAVPLAKTGGLGDMVGACANALRRAGMKVTVM LPGYPDAITQLQHTRTVCEWTDLPGGPARLLSGHMGAQGIPVLLFDAPALFARPGNPY LDAHGEPYEDNALRFASFSQAAARVAGGVPGVHRSDTVQAHDWHAGLVPLFVKRAQAP VKTVFTIHNLAFQGNFPMHVVPDIGVPPDAAHEAEFWGQFSFLKAGLLWADRITTVSH AYAREILTDTAGCGMQDLLRARQRDLIAILNGIDNDVWNPSKDPLLPQPFVASNLSGK HTAKRVLQQRFGLPEDAKAPLLAVGSRLTHQKMADVTLQALPQLLESNPQLQVAVLGC GEHAYETGMADLAARYPRQVAAKIGYTEAFAHLLHAGADILLHGSRFEPCGLTPLYSM RYGTVPVASRVGGLMDTITDRGSPEAALHGATGFLFDGDTADAMVAAVERALHVFAQP QAWRILQYNGMTTDFGWSQPAREYIALYRTLVPAATPMPAVALVQAPVAPDAVHTPRP EQPVRTPARRRSTALSDEIRAHAVARAASAEKIRA" gene 643141..643704 /locus_tag="Rpic12D_4054" /db_xref="GeneID:8021742" CDS 643141..643704 /locus_tag="Rpic12D_4054" /EC_number="1.11.1.15" /inference="protein motif:TFAM:TIGR03137" /note="KEGG: rso:RSp0245 alkyl hydroperoxide reductase subunit C; TIGRFAM: peroxiredoxin; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein" /codon_start=1 /transl_table=11 /product="peroxiredoxin" /protein_id="YP_002983975.1" /db_xref="GI:241665616" /db_xref="InterPro:IPR000866" /db_xref="InterPro:IPR013740" /db_xref="InterPro:IPR017559" /db_xref="GeneID:8021742" /translation="MSLINTQVQPFKAQAFHNGKFIEVTDESLKGKWSVLIFMPAAFT FNCPTEVEDAADNYAEFQKAGAEVYIVTTDTHFSHKVWHETSPAVGKAQFPLVGDPTH ALTNAFGVHIPEEGLALRGTFVIDPQGVIKTMEVHDNAIARDVKETLRKLKAAQFVAN NPGNVCPAKWNEGAKTIKPSLDLVGKI" gene 643830..645404 /locus_tag="Rpic12D_4055" /db_xref="GeneID:8021743" CDS 643830..645404 /locus_tag="Rpic12D_4055" /inference="protein motif:TFAM:TIGR03140" /note="TIGRFAM: alkyl hydroperoxide reductase, F subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rso:RSp0246 alkyl hydroperoxide reductase subunit F" /codon_start=1 /transl_table=11 /product="alkyl hydroperoxide reductase, F subunit" /protein_id="YP_002983976.1" /db_xref="GI:241665617" /db_xref="InterPro:IPR000103" /db_xref="InterPro:IPR000759" /db_xref="InterPro:IPR001327" /db_xref="InterPro:IPR003042" /db_xref="InterPro:IPR008255" /db_xref="InterPro:IPR012081" /db_xref="InterPro:IPR013027" /db_xref="GeneID:8021743" /translation="MLDADVKAQLKAYLERLVQPIELVANVDDSEGSRDMMDLLRDVA EQSSMIVLTEQRDAAERAPSFLIRRTGADVSVRFAAIPTGHEFTSLVLALLQVGGYAP KLEADVIEQIRNIEGDFRFETYMSLTCQNCPDVVQALNVMSVINPRIQHVAIDGALYQ GEIEARQIMAVPTVFLNGETFGTGRMGVEEILAKIDTGAAARDAEKLAAKEAFDVLIV GGGPAGAAAAVYAARKGVRTGVVAERFGGQVLDTLGIENFISVQETEGPKFAAALEQH VRQYDVDIMNTQRAVKLTPADKPGGFAEVTLANGAVLKGRSVILSTGARWRNVNVPGE QEYKNKGVAYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGLVSHVTLLEFASELKA DAVLVRKLQSLPNATIVTNAQTTEITGDGQKVNGLRYKSRVDGVEHTVALEGVFVQIG LVPNTEWLDGALERNRFGEIVVDARGQTSAEGVFAAGDATTTPYKQIIIATGDGAKAA LSAFDHLIRVPLAEAA" gene complement(645482..646369) /locus_tag="Rpic12D_4056" /db_xref="GeneID:8021744" CDS complement(645482..646369) /locus_tag="Rpic12D_4056" /inference="protein motif:PFAM:PF03466" /note="PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pap:PSPA7_2742 putative transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LysR family" /protein_id="YP_002983977.1" /db_xref="GI:241665618" /db_xref="InterPro:IPR000847" /db_xref="InterPro:IPR005119" /db_xref="GeneID:8021744" /translation="MIDLVLLRSFVTVVDTGNFTRAAEHLHLTQSTVSQQILRLEQQL DCRLLDRSQRQVLPTEEGDRLLGYARRLLRLANEASEALSPEHTGGVLRLGVPEDLGS GALMPLIASFARERPRLRLEVESGLSHHLLRLYRNGDLDMLLVKQWGTDSDCHARWAE PVCWIDSAERPHTLPLGPSQPSLPLVVFPVGALYRQEMLHALESIGQPWRITYSSPSL ASLCAAVSAGLGVSLLPASTVQAGHRVLGAADGFPEIGGLELALFARPDLDSAGRALR DRLVEMCAARAQALQSAAG" gene 647004..647459 /locus_tag="Rpic12D_4057" /db_xref="GeneID:8021745" CDS 647004..647459 /locus_tag="Rpic12D_4057" /inference="protein motif:PFAM:PF01475" /note="PFAM: ferric-uptake regulator; KEGG: rso:RSp0247 ferric uptake transcriptional (FUR)-like transcription regulator protein" /codon_start=1 /transl_table=11 /product="ferric uptake regulator, Fur family" /protein_id="YP_002983978.1" /db_xref="GI:241665619" /db_xref="InterPro:IPR002481" /db_xref="GeneID:8021745" /translation="MPNSTDLRRAGLKATSPRVKILEILTAGTEHGRHLSAEDVYRQL LTSEIDVGISTVYRVLNQLVDAGVLLRHAFEAGHAVYELNEGAHHDHLICVSCGRVEE FHDDAIESRQERVANERGFVLRDHALALYGVCPACQAGAGVSSMVGLNA" gene 647556..647807 /locus_tag="Rpic12D_4058" /db_xref="GeneID:8021746" CDS 647556..647807 /locus_tag="Rpic12D_4058" /inference="similar to AA sequence:KEGG:RS03718" /note="KEGG: rso:RS03718 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983979.1" /db_xref="GI:241665620" /db_xref="GeneID:8021746" /translation="MQRRLKSEDELKTLLARCVQQHPECAQCELRAMCIHRPDHTGCN WSAEFDFPVDDDAAAIRGLSVAKRLLTRARTQYNVVPAQ" gene complement(647817..648122) /locus_tag="Rpic12D_4059" /db_xref="GeneID:8021747" CDS complement(647817..648122) /locus_tag="Rpic12D_4059" /inference="similar to AA sequence:KEGG:RS03717" /note="KEGG: rso:RS03717 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983980.1" /db_xref="GI:241665621" /db_xref="GeneID:8021747" /translation="MTEELLVQLIAEVEKEDPVDFANLPFDEQMLRDLVCKLVSRQLT QMEKAHFSQDEVIVSLTASIAKLVLENLVLNARLLAQQGHGESARALLERISRQAKG" gene complement(648229..648549) /locus_tag="Rpic12D_4060" /db_xref="GeneID:8021748" CDS complement(648229..648549) /locus_tag="Rpic12D_4060" /inference="similar to AA sequence:KEGG:RS03716" /note="KEGG: rso:RS03716 putative transmembrane protein" /codon_start=1 /transl_table=11 /product="putative transmembrane protein" /protein_id="YP_002983981.1" /db_xref="GI:241665622" /db_xref="GeneID:8021748" /translation="MSVYHVVETGVVATVVALSALSLTGRYAPAMRARTAARVAGWCN RPSRPGWMRAFGQRLLTPGESPSCHSDPLSGSACGTGCSGCASGDSVSAAPVVQPIHF VRRK" gene complement(648546..650411) /locus_tag="Rpic12D_4061" /db_xref="GeneID:8021749" CDS complement(648546..650411) /locus_tag="Rpic12D_4061" /inference="protein motif:TFAM:TIGR00437" /note="TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: Ferrous iron transport protein B domain protein; GTP-binding protein HSR1-related; nucleoside recognition domain protein; Ferrous iron transport B domain protein; KEGG: rso:RSp0251 ferrous iron transport B transmembrane protein" /codon_start=1 /transl_table=11 /product="ferrous iron transport protein B" /protein_id="YP_002983982.1" /db_xref="GI:241665623" /db_xref="InterPro:IPR002917" /db_xref="InterPro:IPR003373" /db_xref="InterPro:IPR005225" /db_xref="InterPro:IPR006073" /db_xref="InterPro:IPR011619" /db_xref="InterPro:IPR011640" /db_xref="InterPro:IPR011642" /db_xref="GeneID:8021749" /translation="MQMHASSSSASTPALRVALVGNPNCGKTALFNLLTGSRQKVANY AGVTVERKEGRFTAPSGRHVQILDLPGAYSLIATSPDEAITRDICLGTFRGESRPDML ICVVDATNLRLHLRFVLELQRLGLPMVLALNMVDAAERRGIRIDRAKLETALGVPVVQ TVAIKRNGAADLVAHIDHEQLPAVPVGLPADADPHVEVKRLLDTAVTMPRSTAELDDR LDRIVLHPVLGLMLLAVLMFFMFQAVFSWAQPLMDGIQGAVEAVGVWVGNVMPDGMLK SLLVNGIIAGTGSVLVFLPQILILFLFILSLEESGYLPRAAFLLDRLMAGAGLSGRSF IPLLSSFACAIPGVMATRTIQDPRDRLVTILVAPLMTCSARLPVYALLIGAFIPVRKV WGLFNLQGLVLFGLYMAGIVSALVVAYVLKYLKRDRNEHPLILELPSYRLPSVRNLIV GLVERARIFLRRIGTVILKMMVLLWFLSTFPAPPANATLPAIDYSFAGMIGRALEVVF APIGFTWQMCIALIPGMAAREVAVGALATVYSLSATHEDAAAQLAPIISQQWSLATAL AFLAWYVYAPQCISTLATIRRETNSWKVMAGTAGYLFALAYLAAFATYQIARVLT" gene complement(650458..650766) /locus_tag="Rpic12D_4062" /db_xref="GeneID:8021750" CDS complement(650458..650766) /locus_tag="Rpic12D_4062" /inference="protein motif:PFAM:PF04023" /note="PFAM: FeoA family protein; KEGG: rso:RS03714 hypothetical protein" /codon_start=1 /transl_table=11 /product="FeoA family protein" /protein_id="YP_002983983.1" /db_xref="GI:241665624" /db_xref="InterPro:IPR007167" /db_xref="GeneID:8021750" /translation="MRLSELSRRATAVVDHVEDREPADPISQRLRELGFVTGEEVRVV AVGPFGGDPLVVQVGFTRFALRRQEAARVCVRAESATQPAAAIASPETAPPVKVREAA" gene 651454..655005 /locus_tag="Rpic12D_4063" /db_xref="GeneID:8021751" CDS 651454..655005 /locus_tag="Rpic12D_4063" /inference="protein motif:TFAM:TIGR00254" /note="KEGG: rso:RS03712 hypothetical protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase HAMP region domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; histidine kinase HAMP region domain protein; PAS domain containing protein" /codon_start=1 /transl_table=11 /product="diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)" /protein_id="YP_002983984.1" /db_xref="GI:241665625" /db_xref="InterPro:IPR000014" /db_xref="InterPro:IPR000160" /db_xref="InterPro:IPR000700" /db_xref="InterPro:IPR001610" /db_xref="InterPro:IPR001633" /db_xref="InterPro:IPR003660" /db_xref="InterPro:IPR013655" /db_xref="InterPro:IPR013656" /db_xref="InterPro:IPR013767" /db_xref="GeneID:8021751" /translation="MPKHAFFPTTLRGRLLALAAVAALPAIVVAIAGVALYRDRLNDH LAQHLTHETETAAARVGMVLSNANTLLSVLIADDSALRMERQECSSFVNRVFHNQSEL ANLGIIDAHRKLVCTPDTAKLAIDLSDRPYINEIMATGRPSLSTFVIGRVSGQAVLIS ARPMAGNDGTIRGVAYAAVRQSALIAAAVDGMSEAPVYLVDAAGNVLSTHGALEAAQV PAIVRGPLVAAAAQQPGEPVFVDDTDGVRRAYAAMVVPHAAGGHLRIVRGVDATDIVR QQRNVTLAGGGAILLMVVMLLALIQMALRRMVMPRIDALVDAARHYATGDFSARVPEH GSSRDELSLLERTFNEMRAAIQRHDATVHRLTERFQRVARATNDWIFDWDIATGESWA NASLHRLLGSDALLGQGDDDGTGGGTSRTLTFQQFVHPDDVDAFAHELRTVLNSDRDS WQHVCRVIDANRATRTVEIRASLYRDQDGRAVRMVGGVTDISQRSAIEQELRSSEANL RVAEQIALLGSWRWDVLRDSTTWSSGMYVLTGMPPGAPPAFAQQAQFFTADSYNRLRE AASRAVTEGEAYSLELEMIRRDGEHRWVLSRGNIERNDRDEVVALFGTMQDITDRRES DEQLRLLRRVVESVPSGITVADAQQPDFPIVYVNPGFERMTGYRAEEILGRNARFLHS SEPGQPALNEVRTALRDESEIRVLLRNFRKDGHAFLNNFLLSPVRDAKGAVTHYVGIQ DDVTEQEMTRTRLAQHATIDSLTGLPNRTLLADRVQQSVEMAARQRSRFYVALVNIDR FKVVNDSLGHLLGDEVLRRVAERLRDAADTVDTVARFGGDVFALVISHAGSRGVDFGF DLFAEPVRVEGHEVFVTASIGVAEYPAHGADADSLIRHAEMAMYYAKQNGRNRLEFFA PEMDIGVSYRLNLEHQIRATLEQGQFRLLYQPQIDTKTGRVCGLEALIRWIHPTRGLL PPAAFIPVAEESGLIVEIGNWVLTEAARQRAEWHKRGLADDLTLAVNVSPLQFKRGTV LPTLLKLQRQYGLGSGFLELEVTESMLMEGTERTIEDLTAIRQLGVRIAIDDFGTGYS SLAYLKRLPIDLIKIDRAFVKDIDRDSNDAAICTTVVVLAHNLGVKVCAEGVEDAAQS AFLASHQCDVLQGYYFSEPLLPEAVTALLERNTRFTL" sig_peptide 651454..651552 /locus_tag="Rpic12D_4063" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.674 at residue 33" gene complement(655027..656616) /locus_tag="Rpic12D_4064" /db_xref="GeneID:8021752" CDS complement(655027..656616) /locus_tag="Rpic12D_4064" /inference="protein motif:TFAM:TIGR00229" /note="KEGG: rso:RS03711 methyl-accepting chemotaxis transducer transmembrane protein; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; PAS domain containing protein; histidine kinase HAMP region domain protein" /codon_start=1 /transl_table=11 /product="methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor" /protein_id="YP_002983985.1" /db_xref="GI:241665626" /db_xref="InterPro:IPR000014" /db_xref="InterPro:IPR003660" /db_xref="InterPro:IPR004089" /db_xref="InterPro:IPR004090" /db_xref="InterPro:IPR013655" /db_xref="InterPro:IPR013767" /db_xref="GeneID:8021752" /translation="MRKNLPVTQAETALNPTDYLISRTDLKGLIVFANPAFVRISGYA HDELMGAPHNLVRHPDMPEAAFADLWATLQAGKPWRGFVKNRRKDGGFYWVLANVTPV FQNNAVVGYTSVRSMAMPAQIARAQRAYTAINEGDTSYTVRAGRILRTGWRRVVNLFQ IDSLRFKVIGLQTLIASAILIGTVWAHIALEAADLHGAAWLVFSRDWLWLTGVGCAGL ATMSGVLLARTLIRPLEEAATLATRLAAGDLTTVVEARSSDELGEVMRAMGTMRASLS SIVRDIQDGAASVAHSTQQISAGNHDLSARTEQQAAALEETASSMEELTSMVAQNADH ARAASALAEQASTIAADGGQVVQRVVQTMDAIRADSQRVTEIIATIESIAFQTNILAL NAAVEAARAGEEGRGFAVVAGEVRSLAQRSAQAAAQSKEIIRASDQSVRDGVDLVHKA GATMTQIVQSVQTVTQLMSEISASSREQSSGIAQINASVSQLDGVTQQNATLVEEAAA ATSVLARQSEDLKHAIAVFRA" gene 656833..657084 /locus_tag="Rpic12D_4065" /db_xref="GeneID:8021753" CDS 656833..657084 /locus_tag="Rpic12D_4065" /inference="similar to AA sequence:KEGG:RS03710" /note="KEGG: rso:RS03710 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983986.1" /db_xref="GI:241665627" /db_xref="GeneID:8021753" /translation="MHKICGDVEIVPRVVPAGGRGWEARVEVVFRGAEGQSLSGSQPV RPGCTFGSPREAMDAALLHGQRLLREWVRGATPQTEVAT" gene complement(657098..657925) /locus_tag="Rpic12D_4066" /db_xref="GeneID:8021754" CDS complement(657098..657925) /locus_tag="Rpic12D_4066" /inference="protein motif:PFAM:PF08021" /note="PFAM: FAD-binding 9 siderophore-interacting domain protein; Oxidoreductase FAD-binding domain protein; Siderophore-interacting protein; KEGG: rso:RS03709 hypothetical protein" /codon_start=1 /transl_table=11 /product="FAD-binding 9 siderophore-interacting domain protein" /protein_id="YP_002983987.1" /db_xref="GI:241665628" /db_xref="InterPro:IPR007037" /db_xref="InterPro:IPR008333" /db_xref="InterPro:IPR013113" /db_xref="GeneID:8021754" /translation="MFAFNRTQGLMSQLLSSVKPATRRMRVRVRAIHTLSPRMRRVVF TGVAAMDLADLAGAAPGAAIKLMFPHDAAGPGRTLGRAYTIRRYHAARDELEIDFVVH DETPAAQHGPAARWLEHAAPGDEVEFAGPKRGFRADPAAPWTLLIGDETALPAIFAIL EALPEHAQVLTYIAIGDARARLPLEGALAEHPRSRGIHWVESDTAHAGAMMVGALSAQ AMPAGTPQVFLAGEASLLKQVRTLLEGAWAVPHDAIDAKGYWTAGLSREERKASEAR" gene complement(658026..658685) /locus_tag="Rpic12D_4067" /db_xref="GeneID:8021755" CDS complement(658026..658685) /locus_tag="Rpic12D_4067" /inference="protein motif:PFAM:PF03551" /note="PFAM: transcriptional regulator PadR family protein; KEGG: rso:RS03708 hypothetical protein" /codon_start=1 /transl_table=11 /product="transcriptional regulator, PadR-like family" /protein_id="YP_002983988.1" /db_xref="GI:241665629" /db_xref="InterPro:IPR005149" /db_xref="GeneID:8021755" /translation="MRGWFGHHHKMWIEKHFMMGRHGHGGHGFGRGMGGPGGYGEGDD EGGSPWRGRRLSSADLQLVLLALLKGTPRHGYELIKAVEEHSLGFYTPSPGMVYPALS YLEDHGFASVTVEGNKKRYGITPEGETWLAERQHSADAILAQLRAMGERVKRMNEAMA FDRETDNAAEWTDTGHDPLRTARWRLKFALMEKRFASREEQQRVADILLRALKEITGE R" gene complement(658798..659313) /locus_tag="Rpic12D_4068" /db_xref="GeneID:8021756" CDS complement(658798..659313) /locus_tag="Rpic12D_4068" /inference="protein motif:PFAM:PF01047" /note="PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: rme:Rmet_3441 transcriptional regulator, MarR family" /codon_start=1 /transl_table=11 /product="transcriptional regulator, MarR family" /protein_id="YP_002983989.1" /db_xref="GI:241665630" /db_xref="InterPro:IPR000835" /db_xref="GeneID:8021756" /translation="MSKRATAGKDNDTSRNAPSIPEPGQGKRGEEGYLGYLLRQASAA QRLRMERAMADVGVTLPQFLVLTMLRAYPGISNADLARLTMLTPQTVSVIVTNLERSG AITRRPHAVHGRIQHIDVTPEGSALLAACRKRSGGIEQDLLEGFTPEEEEVVRRWLVH VAKLGSDKPAS" gene 659392..659889 /locus_tag="Rpic12D_4069" /db_xref="GeneID:8021757" CDS 659392..659889 /locus_tag="Rpic12D_4069" /inference="protein motif:TFAM:TIGR00778" /note="TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: afe:Lferr_1680 alkylhydroperoxidase like protein, AhpD family" /codon_start=1 /transl_table=11 /product="alkylhydroperoxidase like protein, AhpD family" /protein_id="YP_002983990.1" /db_xref="GI:241665631" /db_xref="InterPro:IPR003779" /db_xref="InterPro:IPR004675" /db_xref="GeneID:8021757" /translation="MEDLSPRMDYSEFVDTAVGVAPALQALGKAVDASGLEKPLTELI KLRASQINGCAFCVQFHLNLARKLRVAPAKLDLVAVWRDTPAVFTPRERAALAWTEAL TTLARAADHGVEDHEYDAVLEHFSRTEVAFLTAAVANIQAWNRIAVAMRFAPQVPAAV TAEQA" gene 659886..660335 /locus_tag="Rpic12D_4070" /db_xref="GeneID:8021758" CDS 659886..660335 /locus_tag="Rpic12D_4070" /inference="protein motif:PFAM:PF00583" /note="PFAM: GCN5-related N-acetyltransferase; KEGG: rme:Rmet_3439 GCN5-related N-acetyltransferase" /codon_start=1 /transl_table=11 /product="GCN5-related N-acetyltransferase" /protein_id="YP_002983991.1" /db_xref="GI:241665632" /db_xref="InterPro:IPR000182" /db_xref="GeneID:8021758" /translation="MTMDAVRPIEDEAALRACFPVMHQLRPHLADADELVARWRRQVQ DGYRLIAVWRDGVPVALAGYRQQENLVYGPFLYVDDLVTDANLRSSGLGNVLMSHLKA EAERLGCARLVLDTPLSNVLGHRFYYRNGLLAGALRFGMNTKTGAAR" gene 660332..660958 /locus_tag="Rpic12D_4071" /db_xref="GeneID:8021759" CDS 660332..660958 /locus_tag="Rpic12D_4071" /inference="protein motif:PFAM:PF02525" /note="PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: cti:RALTA_B1550 (acyl-carrier protein) phosphodiesterase" /codon_start=1 /transl_table=11 /product="NAD(P)H dehydrogenase (quinone)" /protein_id="YP_002983992.1" /db_xref="GI:241665633" /db_xref="InterPro:IPR003680" /db_xref="InterPro:IPR005025" /db_xref="GeneID:8021759" /translation="MTTLLHVTVSPRDDRSHSRRGAKWVVAQLAEAVGGLRVIERDLA ATPLPHPDAGFVEASLTPDADRTAAHRAALALSETLIGELGAADAVLISTPVHNYTVP SALKAWIDLVVRPERTFRRTPTGKVGMLTDRSVLVVSASGGHFDGAHAQTDFLMPYLR YVFATVGIHQVEGIRLQNTARGADSAMQAFESFRQELAARMLLMPLVA" gene complement(661024..661671) /locus_tag="Rpic12D_4072" /db_xref="GeneID:8021760" CDS complement(661024..661671) /locus_tag="Rpic12D_4072" /EC_number="3.4.19.3" /inference="protein motif:TFAM:TIGR00504" /note="KEGG: rso:RSp0259 pyrrolidone-carboxylate peptidase protein; TIGRFAM: pyrrolidone-carboxylate peptidase; PFAM: peptidase C15 pyroglutamyl peptidase I" /codon_start=1 /transl_table=11 /product="pyrrolidone-carboxylate peptidase" /protein_id="YP_002983993.1" /db_xref="GI:241665634" /db_xref="InterPro:IPR000816" /db_xref="GeneID:8021760" /translation="MTTVLVTGIEPFESDPTNPSWDIAQALDSTQVDSAVIVARQLPC VFGLANEILVDAIEATSPALVFALGLATGRTEISVERVAINVIDARIPDNAGNQPVDT PVVADGPTAYFSTLPIKAIVHALREAGVPAGVSQSAGTYNCNHLFYGLMHHIAMRAPQ VRGGFIHVPTTPELAARHAGRPSLSIDTQIKGIRLAVRTTLATQSDLKMSAGAVH" gene complement(661750..662169) /locus_tag="Rpic12D_4073" /db_xref="GeneID:8021761" CDS complement(661750..662169) /locus_tag="Rpic12D_4073" /inference="protein motif:PFAM:PF01047" /note="PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: rso:RS03706 transcription regulator protein" /codon_start=1 /transl_table=11 /product="transcriptional regulator, MarR family" /protein_id="YP_002983994.1" /db_xref="GI:241665635" /db_xref="InterPro:IPR000835" /db_xref="GeneID:8021761" /translation="MFDHCLYFNTTALARSVEREWTVAYAPFSLTPPQGFVLRVVLKR PGVLNRELAEVLGIARPTATRLVDGLIAKGLVERQPSAEDGREWNLFPTEAARELETA LQAASAKVARRLREHVGASAFDDTVQAIRNVRSTLNT" gene complement(662255..663853) /locus_tag="Rpic12D_4074" /db_xref="GeneID:8021762" CDS complement(662255..663853) /locus_tag="Rpic12D_4074" /inference="similar to AA sequence:KEGG:H16_B1494" /note="KEGG: reh:H16_B1494 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983995.1" /db_xref="GI:241665636" /db_xref="GeneID:8021762" /translation="MTPPTLPALHVELTTPQTVDGRRAPFQSLWLLVRLAYAHRLSPE QPLVRLADLRGAVSDASTQRMMISRAFRDWQNWGVQAGWGEQRDREPRFLNADKRSQG PFWLTPEDAARVVCLVEGRIADDTDVRAFLGIAAPESSTDNSAEANASALSGPAPGTP NPAFWHAFLTARHAMREGRLLHALSTGTIASDTERGGALLALRHAGDAADNDFQRALV TLGEAMAARRLGDSTRASALLSQLRAHRRQRHVLGNDYLAAMERIVTAWCAYDRRDLD LAAGLLARLADAEPGRSLLRYHPQIRFEWNNLSALIERARLLYADADGIALEARAHAA QRIVAQFETALAAALESQASDAVQQVAANLGMTCWLLRDVLGNAVHADGTVDAVRWLA MSEWQALRNGGPLQSAWNAIALMRIARADTSRAALKLNDLGTQAGPFAEAFDARYWPQ RWSDVAALRLREHDSGRHRYGHVQVSGLLLELAWFAHADGDHVTARTAMNRLAQATQD LAPHDRAYFVQALKQLTQMADAPP" gene 664045..664860 /locus_tag="Rpic12D_4075" /db_xref="GeneID:8021763" CDS 664045..664860 /locus_tag="Rpic12D_4075" /EC_number="3.5.2.6" /inference="protein motif:PRIAM:3.5.2.6" /note="PFAM: penicillin-binding protein transpeptidase; KEGG: pla:Plav_3016 beta-lactamase" /codon_start=1 /transl_table=11 /product="Beta-lactamase" /protein_id="YP_002983996.1" /db_xref="GI:241665637" /db_xref="InterPro:IPR001460" /db_xref="InterPro:IPR002137" /db_xref="GeneID:8021763" /translation="MFSRWSKTFASALTACAVAMSTTTAHAELVVRNDLKRAFDDAGV SGTFVLMDIGADRTYVVDPARAARRIHPASTFKIPNSLIAFDTGAVRDDQEVLPYGGK PQPYQQWEHDMALPEAIRLSAVPIYQEVARRVGLERMQAYVDAFEYGNRQLGSVIDQF WLRGPLEISAFEEARFTSRMALKQLPVKPRTWDMVQRMLLIEQQGDAALYAKTGVATE YQPEIGWWVGWVERAGHVYAFALNIDMPREGDMAKRVPLGKQLMQALAVWPAP" sig_peptide 664045..664128 /locus_tag="Rpic12D_4075" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.985 at residue 28" gene 665027..665470 /locus_tag="Rpic12D_4076" /db_xref="GeneID:8021764" CDS 665027..665470 /locus_tag="Rpic12D_4076" /inference="ab initio prediction:Prodigal:1.4" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002983997.1" /db_xref="GI:241665638" /db_xref="GeneID:8021764" /translation="MFRVYKAMAVAITAAVGASGALAAGSQDGVIYFTGAIVEAGFRV LPALQATGTGEGLQARRSASGDQVVLDFRSTAVRAVPVDVSVEARAASSLNPLRVGDA RSKADVLAKYGGFKANLLTANNGTLTLSRAPGVEPALAVVTLSYQ" sig_peptide 665027..665098 /locus_tag="Rpic12D_4076" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.923 at residue 24" gene complement(665522..667135) /gene="mdoD" /locus_tag="Rpic12D_4077" /db_xref="GeneID:8021765" CDS complement(665522..667135) /gene="mdoD" /locus_tag="Rpic12D_4077" /inference="protein motif:PFAM:PF04349" /note="PFAM: periplasmic glucan biosynthesis protein MdoG; KEGG: rso:RS03704 glucan biosynthesis protein D" /codon_start=1 /transl_table=11 /product="periplasmic glucan biosynthesis protein MdoG" /protein_id="YP_002983998.1" /db_xref="GI:241665639" /db_xref="InterPro:IPR006311" /db_xref="InterPro:IPR007444" /db_xref="GeneID:8021765" /translation="MVTRRTLLASASVTATLAALGITPEALAADRVKLGDAAPFSFDA LIERARTMAGKPYTPPATAPADILSKIDYEAHGKIKFDTAHALFADGPGQFPVTFFHL GTFFRAPVRMHVVEKGAAREIVYDESYFDMPADSPARKLPRGSGFAGFRFQESRLGDQ KKLDWKKNDWVAFLGASYFRAIGELYQYGLSARGIALDVAQAGKPEEFPNFTHVWFDT PADNRADSVTIYTLLDGPSITGAYRFVMHRTKGVVMDIDTAIFLRKDVDRFGIAPATS MYWFSETAKGTATDWRPEVHDSDGLALWTGNGERIWRPLNDPPRTMASAFGDNNPRGF GLLQRDRDFNNYQDGVHYERRPSLWVEPLEGWGEGAVQLIEIPTDDEIHDNIVAMWVP KAPARAGSQYRLRYRLHWLADEPYPTQLARCVATRMGNGGQPGQPRPRGVRKFMVEFK GGPLEKLPFGTKPEAVLSTSRGTFSYVFTEAVPNGVPGHWRAQFDLTVDGKEPVDMRL FLRVDGKPLSETWLYQYHPFQSPVGPVAS" sig_peptide complement(665522..665608) /gene="mdoD" /locus_tag="Rpic12D_4077" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.881 at residue 29" gene 667333..668475 /locus_tag="Rpic12D_4078" /db_xref="GeneID:8021766" CDS 667333..668475 /locus_tag="Rpic12D_4078" /inference="protein motif:PFAM:PF00144" /note="PFAM: beta-lactamase; KEGG: bra:BRADO6186 putative beta-lactamase" /codon_start=1 /transl_table=11 /product="beta-lactamase" /protein_id="YP_002983999.1" /db_xref="GI:241665640" /db_xref="InterPro:IPR001466" /db_xref="GeneID:8021766" /translation="MARRLRSIGIALAWVCTVCGAQAAPCDAPARLNDGWQVEADPAA AGFDAGQLCTVLRNVADADINFHSLLVVRHGRLVAEVYRAGKDERVKDLFRTTRTFDA STLHDIRSISKSVTSLLWGIAQGQGKTPPLDTPVLSLFPGLADLNRDGREAITLSQML SMSSGLAWNEWRATSLFNNDEFGLFWHTSQAHYVFDRPMAAAAGTQFNYNGGNTAVLA QLLAERVGMPVPEYARKQLLEPLGITDWEWVDDYRGRPLAFAGVRLRPRDLARIGQLV LQHGQWNGRQLVPAEWIAESTRPHIDTGMGLQYGYQWWLGKVAAGSAEYAWIGGIGNG GQRLWIVPGLDLVVVTTAGDYNQRAIWKQAETLLNEVMTAVQPTPR" sig_peptide 667333..667404 /locus_tag="Rpic12D_4078" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.948 at residue 24" gene complement(668506..668985) /locus_tag="Rpic12D_4079" /db_xref="GeneID:8021767" CDS complement(668506..668985) /locus_tag="Rpic12D_4079" /inference="protein motif:PFAM:PF08909" /note="PFAM: Domain of unknown function DUF1854; KEGG: rme:Rmet_0706 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002984000.1" /db_xref="GI:241665641" /db_xref="InterPro:IPR015005" /db_xref="GeneID:8021767" /translation="MTAMQTPDFALSRNGFGKLVMTLADGTVHEGVVPVRAFPISAAG EGLSLMSTDGRELAWITQPDALPTPMRALIEAELGAREFMPEIRTIVGVSTYATPSTW TVQTDRGQTDLVLRGEEDIRRLTGTTLLISDSHGIHYLIRDLLALDKHSRKILDRFL" gene complement(668999..671443) /locus_tag="Rpic12D_4080" /db_xref="GeneID:8021768" CDS complement(668999..671443) /locus_tag="Rpic12D_4080" /inference="protein motif:PFAM:PF00005" /note="PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: rme:Rmet_0705 ABC transporter-related protein" /codon_start=1 /transl_table=11 /product="ABC transporter related" /protein_id="YP_002984001.1" /db_xref="GI:241665642" /db_xref="InterPro:IPR001140" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR017871" /db_xref="InterPro:IPR017940" /db_xref="GeneID:8021768" /translation="MYTCEQILQAATIATPHSCLDLCSSFSRFGLFFGHLDALFEFFA PLMTQSSPSSAPTVVRAQEPWRVVLGSSLAPEETVLAGLQLDLDARLHFTQGWLVVTN RRLIGQAVGEKDLQSWDIAPGMTLAHSDHAGVGTLELSDGQRRLASWRYTLGHNTDAL RLADAFDAQRNALTTGAKAAQPDADICPTCKAPLPAGEDNCPQCSRELEQPPSTWALL RLWRFAQPYRWELLAGFALLLIGTAATLVPPYLTMPLMDKVLIPYQNGQPVDYRLVTL YLSGLFGAALVAWVLGWARTYLLARVSERISADLRTTTYEHLLKLSLEYFGGKRTGDL MARIGSESDRISVFLSLHLLDFATDVLMIAMTAVILVSIDPWLALVTLVPLPFIAWMI HLVRDRLRHGFEKIDRIWSEITNVLADTIPGIRVVKAFAQEKREVTRFAEANKHNLAI NDRVNAVWSLFTPTVTLLTEVGLLVVWIFGIWRVSHDAITVGVLVAFLTYISRFYTRL DSMSRIVSVTQKAAAGAKRIFDILDHVSSVPEPARPVHLEKVKGAIELRDLGFRYGNR AVIRGLNLSIQPGEMIGLVGHSGSGKSTLVNLICRFYDVSEGAIRLDGTDIRSLPVSE FRRNIGLVLQEPFLFFGTIADNIAYGKPDATREEIIAAARAAHAHEFILRLPHGYDSL VGERGQALSGGERQRISIARALLINPRILIMDEATSSVDTTTEKEIQKALDNLVQGRT TIAIAHRLSTLRKADRLVVMDRGQIVEVGNHDELLAREGAYYKLYQAQARNVDAETDL TSDGERVDAAAPAYAQ" gene 671595..674255 /locus_tag="Rpic12D_4081" /db_xref="GeneID:8021769" CDS 671595..674255 /locus_tag="Rpic12D_4081" /inference="protein motif:TFAM:TIGR02068" /note="TIGRFAM: cyanophycin synthetase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Mur ligase middle domain protein; KEGG: rme:Rmet_0704 cyanophycin synthetase" /codon_start=1 /transl_table=11 /product="cyanophycin synthetase" /protein_id="YP_002984002.1" /db_xref="GI:241665643" /db_xref="InterPro:IPR000115" /db_xref="InterPro:IPR003135" /db_xref="InterPro:IPR004101" /db_xref="InterPro:IPR011761" /db_xref="InterPro:IPR011810" /db_xref="InterPro:IPR013221" /db_xref="GeneID:8021769" /translation="MKKKDIEILDVMSLRGPNMWTYRPVLEAWVDIGELEDSPSNTIP GFYERLSTWLPTLIEHRCSPGVRGGFLMRLKEGTWPGHILEHVTLELQNLAGMPGGFG KARETPVRGVYKVIVRAWHEDVTRAALFAARDLVMAAIEDRPYDVDAAVETLRDMVDE QCLGPSTACIVEAADDRNIPSIRLSDGNLVQLGYGARQRRIWTAETDRTSAIAESISR DKDLTKSLLQSCGVPVPEGRMVDSAEDAWDAAEDIGVPVVVKPYDGNHGRGVFTNLMT REEVETAYAVAIEEGNGVIVERFVSGNEHRLLVVGGRLAAAAMGETASVVGDGNSTIE ELIESQINSDPRRGNTEEHPLNCVRLDSAARLELKRQGYADGSAVPPAGRSVLIQRNG NVAFDVTDRVHPSVAAHASLAARVVGLDIAGVDLVAEDISRPLDEQRGAIVEVNAGPG LLMHIRPAQGEPRPVGRAIVDHLFSDKDGTQDDGRIPIVGITGTNGKTVVAKLVAQML QLSGKHTGLGCSDGLYLDRRQVESGARTDRAAWDACHRILMNRAVEAAVFESDSGMIL SQGLPYDRCQVGVVTNFGKPDHLGDFYVEDEDRMVSVLRTQIDVVLKTGVGVLNAADA RLVEMAELCDGEVIFFALSGDLEAIAAHRAAGKRAVFVRDGKVVLATGPTELALADVS AIPLTYDGRVPFQLENVLAAVATGWALGISNDLMRAGIMTFDVGQVDVPGRFTLFQHH GATIVVDDAHNASALEALAAALDNFPAQRRTLVFGAGLQRRDEDLVAQGTVIGQTFDR VLLCEDASVKRTDAEFDRQARALLKQGLQAGGRVAEVVVEGAKRRDVVDAALSQVTAG DLLVLQCDECAIEGTVQQVHQWMGRAESQN" gene 674309..676876 /locus_tag="Rpic12D_4082" /db_xref="GeneID:8021770" CDS 674309..676876 /locus_tag="Rpic12D_4082" /inference="protein motif:TFAM:TIGR02068" /note="TIGRFAM: cyanophycin synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; phosphoribosylglycinamide synthetase; RimK domain protein ATP-grasp; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; KEGG: rme:Rmet_0703 cyanophycin synthetase" /codon_start=1 /transl_table=11 /product="cyanophycin synthetase" /protein_id="YP_002984003.1" /db_xref="GI:241665644" /db_xref="InterPro:IPR000115" /db_xref="InterPro:IPR001645" /db_xref="InterPro:IPR003135" /db_xref="InterPro:IPR004101" /db_xref="InterPro:IPR011761" /db_xref="InterPro:IPR011810" /db_xref="InterPro:IPR013221" /db_xref="InterPro:IPR013651" /db_xref="GeneID:8021770" /translation="MEVSRIRALRGPNLWCRHTAIEAIVACSDQSQLLAELPGFEDRL RARFPAIGPMRPDDEADAPSIAHALEAAALGLQAAAGCPVTFSHTEPTLEPGTYQVVV EYTEEEVGRLAFELAGQLCLAARDDQPFDLDDALHRLRELDEDVRLGPSTGSIVDAAV VRGIPYRRLTQGSMVQFGWGSKQRRIQAAETDMTSAVAESIAQDKDLTKALLHAAGVP VPLGRSVRSAEEAWEAAQEIHGPVVVKPRDGNQGKGVAVRIRTREEVMTAYEAAADIS SDVIVERYIPGHDFRLLVVGKHLVAAARRDPPQVIGDGKHTVRELVDEVNRDPRRGEG HATSLTKIRFDDIALATLAKQGLSADAVPPKGTRVVLRNNANLSTGGTATDVTDDVHP AIAARAVAAAQMVGLDICGVDAVCETMLKPFEDQAGGIVEVNAAPGLRMHLQPSYGKG RAVGEAIVSTMFADGDDGRIPVVAVSGTNGKTTTVRLITHLLASSGLRMGMTGTDGVY IQGQRIDTGDCSGPRSARNVLLHPDVDAAVFETARGGLLREGLAFDRCDVAVVTNVGE GDHLGLNYISTVEDLAVLKSVIVQNVAPRGMAVLNAADPMVARMAEGCPGSVTFFAHD PGLPTLALHRAQGKRVVFVDGPEIVAAEGANETRIALADIPLTRNGTIGFQVENAMSS IAAAWALGIDWTVIRRGLATFVNDAATAPGRFNLFDYKGATLIADYGHNPDAIQALCN AVATMPAQRRMVVISGAGDRRDEDIRKQTQILGGVFDDVVLYEDQCQRGRADGEVLAL LREGLQGASRTSRVDEIRGEFLAIDTALGRLQPGDLCLILIDQVEEALEHIARRVAE" gene 677426..678103 /locus_tag="Rpic12D_4083" /db_xref="GeneID:8021771" CDS 677426..678103 /locus_tag="Rpic12D_4083" /inference="protein motif:PFAM:PF01613" /note="PFAM: flavin reductase domain protein FMN-binding; KEGG: cvi:CV_3073 hypothetical protein" /codon_start=1 /transl_table=11 /product="flavin reductase domain protein FMN-binding" /protein_id="YP_002984004.1" /db_xref="GI:241665645" /db_xref="InterPro:IPR002563" /db_xref="GeneID:8021771" /translation="MDQQQKNKAQTTPQPLQHHYPMMTPPPSPLAIMPNPITPAPVEL AKCYRLLNHGPTTLVTSAHNGVRNVMAAAWAMPLDFDPPKVLVVVDSRTLTRELIEGS GVFALNIPTRAIAETTLTVGTLSGRDVDKFDALGLVTMPARTIDVPLVAGCAGWLECR VIPEPHNEKRYDLFIAEVTAAWANPALFSNGRWHFTDAGSKTLHYLAGGAFFETGEAF TVEVKQL" gene 678100..678612 /locus_tag="Rpic12D_4084" /db_xref="GeneID:8021772" CDS 678100..678612 /locus_tag="Rpic12D_4084" /inference="protein motif:PFAM:PF00583" /note="PFAM: GCN5-related N-acetyltransferase; KEGG: rso:RS03701 acetyltransferase protein" /codon_start=1 /transl_table=11 /product="GCN5-related N-acetyltransferase" /protein_id="YP_002984005.1" /db_xref="GI:241665646" /db_xref="InterPro:IPR000182" /db_xref="GeneID:8021772" /translation="MSVIAIRPLIDEDVAAFKALRLRAIQDAPTAIWPTHDEEAARTL DETRNRIRTTDHQIVLGAFAGPELVGIAGLRREALAQVAHKAVLWGVFVDPAHRRGGI AGRLLHAAITHARAARVLQIHLCVNAENPRAQALYRNAGFETFGIERRAMRVGDRFYD EEHMALRLDA" gene complement(678609..679625) /locus_tag="Rpic12D_4085" /db_xref="GeneID:8021773" CDS complement(678609..679625) /locus_tag="Rpic12D_4085" /inference="protein motif:PFAM:PF00165" /note="PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rso:RS05569 transcription regulator protein" /codon_start=1 /transl_table=11 /product="transcriptional regulator, AraC family" /protein_id="YP_002984006.1" /db_xref="GI:241665647" /db_xref="InterPro:IPR000005" /db_xref="GeneID:8021773" /translation="MPMKNNEKGTVSVSLVNEAVTRARAHGVDMQPIMAAAGITPQML AQPRSRVSSAQYGALWAGIAQAMDDEFFGQDAHPMRWGSFVTMTQAALTARTGRQALA RATGFLRLVLDDLHVRVEEDDQRVRLVFVHRKGTRVPPMFTYATWLIMVYGLVCWLVG RRIPFIAARFRCAAPQDAQEYRLMFCDDMAFKHDASYVDLSPTFLDLPVIQTAASIKT FLRDAPGSFIVKYRNPDSFAARVRKTLRNLPVASWPASDAMALKLNVAEATMRRRLKL EGHTYQSIKDDLRRDIAIGQLQDTRRTIADIAVAVGFAEPSAFHRAFRKWTGMRPTDY RTER" gene 679791..680924 /locus_tag="Rpic12D_4086" /db_xref="GeneID:8021774" CDS 679791..680924 /locus_tag="Rpic12D_4086" /inference="protein motif:PFAM:PF00441" /note="PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rso:RS05570 acyl-CoA dehydrogenase oxidoreductase protein" /codon_start=1 /transl_table=11 /product="acyl-CoA dehydrogenase domain protein" /protein_id="YP_002984007.1" /db_xref="GI:241665648" /db_xref="InterPro:IPR006089" /db_xref="InterPro:IPR006090" /db_xref="InterPro:IPR006091" /db_xref="InterPro:IPR006092" /db_xref="InterPro:IPR013107" /db_xref="GeneID:8021774" /translation="MDDFYTEEQRMIHDAARAFATERLAPNAAQWDRDGALPDEVVRE MGELGLLGMIVPAEWGGSYTDYVAYALALEEVAAGCAASATMMSVHNSVGCGPILKFG TEAQKARYLPDLATGRAIGAFCLTEPHAGSEANNLRTRAVLRDGKWVLTGNKQFVTNG ARADIAIVFAVTDPEAGKRGISAFIVPTDTPGFHVGRPEHKLGIRASDTCPITLEDCA VPEENLLGERGEGLKIALSNLEGGRIGIAAQAVGIARAAFDAARNYANERIQFGKALR EHQTIANMLADMATRLNAARLLVHHAARLRSADKPCLSEASQAKLYASELAEEICSNA IQIHGGYGYLADYAVERHYRDARITQIYEGTSEVQRMVIARHV" gene 680986..682680 /locus_tag="Rpic12D_4087" /db_xref="GeneID:8021775" CDS 680986..682680 /locus_tag="Rpic12D_4087" /inference="protein motif:PFAM:PF00501" /note="PFAM: AMP-dependent synthetase and ligase; KEGG: rso:RS05571 acetyl-coenzyme A synthetase" /codon_start=1 /transl_table=11 /product="AMP-dependent synthetase and ligase" /protein_id="YP_002984008.1" /db_xref="GI:241665649" /db_xref="InterPro:IPR000873" /db_xref="GeneID:8021775" /translation="MNEAVSAAQGFVEARDFLLRHRTDYDRAYREFAWPKLDTFNWAL DYFDVMARGNDNPALWIVDDAQGEGLKLSFAQMSERSSCMANFLRGLGMVRGDRLLLM LPNRVELWDVMLAAMKLGAVVLPATTQLSPDDVRDRVELGGATCVVVDAAELHKFESV DASVKRIAVGAQRDGWIDLAAAYDAPAEFVPDGPTKATDPLLLYFTSGTTSKPKLVEH THQSYPVGHLSTMYWIGLQPGDIHWNISSPGWAKHAWSCFFAPWNAQACVFVYNYARF VPKDTLDVLVRFNVTTLCAPPTVWRMLVQEPLATYAVKLREIVGAGEPLNPEIIERVR SAWGVTIRDGFGQTETTCQIGNTPGQPVVPGSVGRPLPGYRVELVDHDDQPASEGEIV LPLSHRPLGLMQGYANNAKATAEAMRNGYYHTSDVAMRRDDGYFVYVGRTDDVFKSSD YRLSPFELESVLIEHEAIAEAAVVPSSDPLRLSVPKAFVTVRQGYEAGPELARAVFLF SREKLAPYKRIRRLQFSELPKTISGKIRRVELRRLELERTPQPARLPGEYWEEDFA" gene 682753..684300 /locus_tag="Rpic12D_4088" /db_xref="GeneID:8021776" CDS 682753..684300 /locus_tag="Rpic12D_4088" /inference="protein motif:TFAM:TIGR01722" /note="TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: rso:RSp0650 methylmalonate-semialdehyde dehydrogenase oxidoreductase protein" /codon_start=1 /transl_table=11 /product="methylmalonate-semialdehyde dehydrogenase" /protein_id="YP_002984009.1" /db_xref="GI:241665650" /db_xref="InterPro:IPR010061" /db_xref="InterPro:IPR015590" /db_xref="InterPro:IPR016160" /db_xref="GeneID:8021776" /translation="MSAVASLASAKPAAQQDTPPTVKLLIGGEFVESQSKEWRDIVNP ATQEVLARVPFATAGEVDAAIRSAHAAFATWKNTPVGARMRIMLKFQALIREHSPRIA RTLTAEQGKTLPDAEGDIFRGLEVVEHACSVGSLQQGEFLENVAGAVDTYTLRQPIGV CAGITPFNFPAMIPLWMFPMAIVCGNTFVLKPSEQDPLSTMQLVELALEAGVPPGVLN VVHGGKDVVDALCTHEHVKAISFVGSTAVGTHVYRLGSEHGKRVQSMMGAKNHAVVLP DANREQAINALVGAAFGAAGQRCMATSVVVLVGAAQQWVPDLIAKAKTLKVNAGVEPG TDVGPVVSRAAKQRILGLIESGVQQGATLALDGRNVRVAGYEDGNFIGPTIFTDVKTD MDIYTNEIFGPVLLVLTVPTLDDAIALVNANRFGNGVGLFTQSGASARKFQSEIDVGQ VGINIPIPVPVPYFSFTGSRGSKLGDLGPYGKQVVQFYTQTKTVTARWFDDAVDTGGV NTTISLR" gene 684320..685213 /locus_tag="Rpic12D_4089" /db_xref="GeneID:8021777" CDS 684320..685213 /locus_tag="Rpic12D_4089" /EC_number="1.1.1.31" /inference="protein motif:TFAM:TIGR01692" /note="KEGG: rso:RSp0649 3-hydroxyisobutyrate dehydrogenase oxidoreductase protein; TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding" /codon_start=1 /transl_table=11 /product="3-hydroxyisobutyrate dehydrogenase" /protein_id="YP_002984010.1" /db_xref="GI:241665651" /db_xref="InterPro:IPR002204" /db_xref="InterPro:IPR006115" /db_xref="InterPro:IPR006183" /db_xref="InterPro:IPR011548" /db_xref="GeneID:8021777" /translation="MKIAFIGLGNMGAPMARNLLKAGHVLSVFDLNTQAVGVLVEAGA MAAASPKDAVAGAETVITMLPAAAHVRHVLTAEDGVLAGIAKGVPIIDSSTIDPASAK ALAALAAEHGNPFVDAPVSGGTGGAAAGTLTFMVGGSAAAFEQVRPVLSAMGKNLVHC GDTGAGQGAKICNNLVLGITMAGVAEAMSLGEALGIDPKVLGGIINTSTGRCWSSDTY NPFPGVIDTAPSSRGYTGGFGTDLMLKDLGLAGDAAKSVRQPVYLGALAQQLYQTVSS KGDGKLDFSAVIKLYRKDGAA" gene 685213..686010 /locus_tag="Rpic12D_4090" /db_xref="GeneID:8021778" CDS 685213..686010 /locus_tag="Rpic12D_4090" /inference="protein motif:PFAM:PF00378" /note="Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA" /codon_start=1 /transl_table=11 /product="Enoyl-CoA hydratase/isomerase" /protein_id="YP_002984011.1" /db_xref="GI:241665652" /db_xref="InterPro:IPR001753" /db_xref="GeneID:8021778" /translation="MIELETLHQNTVAVLTLKRPPANAFTPEGLLQLQGTVARLNADA RVRALVVTGDGPKFFSAGADLNTFADGDRDVAREAAARFGAAFEALQNARPVVIAAIN GFAMGGGLECALACDIRIAEAHAKLAVPETAVGLLCCGCGTQTLPWLVGEGWAKRMIL TGERVDAQTALRIGLVEEVVETGAAREAAIAMALRVTTLSPQAVTFSKQLIHQARNGV PRGAALAVERERFVDLFDHPDQREGVNAFLEKRAPRWHSTHESETRQ" gene 686007..687158 /locus_tag="Rpic12D_4091" /db_xref="GeneID:8021779" CDS 686007..687158 /locus_tag="Rpic12D_4091" /inference="protein motif:PFAM:PF00378" /note="PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rso:RS05575 putative enoyl-coenzyme A hydratase protein" /codon_start=1 /transl_table=11 /product="Enoyl-CoA hydratase/isomerase" /protein_id="YP_002984012.1" /db_xref="GI:241665653" /db_xref="InterPro:IPR001753" /db_xref="GeneID:8021779" /translation="MSAVQLETVPPQAAAAEPEVLMRVVNRLAIITLNRPSALNALSH GMVRQLATLLEQCRHDDGIAALVLRGAGQKGFCAGGDVRALYQLAQQGRMDGDDGWLQ FFVDEYRLDYALHQFPKPIVALMDGVTMGGGMGLGQAARLRVVTERTKMAMPETRIGF LPDVGATRFLSVMSPELELYVGLTGVTLTGADALHCHLADVCVPAEWLASFEDRLQRM PHDGDLMQALRRVFEPPCNIVPHAPLAQATPWVQRYFDRRSSVDRIVATLRESLEREQ AREPRQWLQATLEAMTTHSPTMLHVTREALLRGRQLSLAECFQMELGIVARGIQEGDF CEGVRAHLVDKDHRPGWAPATLPQVRPERVRHFLTSPWRAERHPLAGLC" gene 687510..689279 /locus_tag="Rpic12D_4092" /db_xref="GeneID:8021780" CDS 687510..689279 /locus_tag="Rpic12D_4092" /inference="similar to AA sequence:KEGG:PA14_46540" /note="KEGG: pau:PA14_46540 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002984013.1" /db_xref="GI:241665654" /db_xref="GeneID:8021780" /translation="MATSVDSFQMKVYQGDSAVLFAFDVADADRADLAGFAIQCTPQG GAPYWVPNRLTFDTPIHADAPLKAGKYVDSIDAPFQSFHWVHFPPHAAAQLTYTVHAR YFVSTNPVQLETRATRIVTVTLQQPMSDWATVGMVRGYVSSQAFIDHYGGNTALAPDK RAQIKSPLLYDTQPYQDKYAYLGATGRRLIIDLLNQCHASDGYGIDVLAYDLDEPDII RAIAWLAQNGRKVRVIQDNSVGTGANATGHGTDDAFETQAAEYFKQTGADVRRTHLAR FQHHKAILLRDAAGKPVRVLAGSANFSLRGLYVQANSVLVFEQDAAQLYAQVFERLWG WIDQYGEDAAGSRKVATAFRADALAADWQAVPQGSTPRARFGFSPHQTDALLTEAADR VKGALSSVLFAVMATDGGGEMLTTLEQVVPHKAGLLSLGVIDKQGGVDAFAPGRDVPS QTVSFAYLKDEAPAPFKQEVDAGTGQHIHHKFVVCDFNGDEPVVFCGSSNLSKGGEEQ NGDSLIAIYDPAIVTAYAIEAIRLFDHYRFRAGESKATADKPLVLKQSAAWADPYYDP QNIKFTERTLFAKSGTALEAVVA" gene complement(689307..690800) /locus_tag="Rpic12D_4093" /db_xref="GeneID:8021781" CDS complement(689307..690800) /locus_tag="Rpic12D_4093" /inference="protein motif:PFAM:PF00501" /note="PFAM: AMP-dependent synthetase and ligase; KEGG: reu:Reut_A3057 acyl-CoA synthetase" /codon_start=1 /transl_table=11 /product="AMP-dependent synthetase and ligase" /protein_id="YP_002984014.1" /db_xref="GI:241665655" /db_xref="InterPro:IPR000873" /db_xref="GeneID:8021781" /translation="MTAHLIFDDRPTDAETLLARGAALAGGLRRMGVQEGDVIGVLLR NAPAYIDVMHACRIAGCYFCPINWHFTPAEVEFLVRDSGAKVLIGHRDLVDAAEPLLP AHVQLLRVDAEGTDRADGYANWLALQTPYDGPIVSPRGHMAYTSGTTGRPKGVVRQAV PLDQLEAHLQKARAVVAATFGIVPGCRALVPAPLYHSAPSLFAQQAAQMAEVLVVNAR FDALRVLEQIERYRIDTVYLVPIMYVRLLKLTDEERSRYDLSSLRFVASTGAPCAPEI KRRMIDWLGPVIYETYASSETGMITVMDPRDAAARPGSAGRPVCDARVRILREDGTPC PTGEIGLIYSHQPAYPDFTYRGNDEARSKIERDGLVTLGDMGYLDADGYLYVCDRASD MVISGGVNIYPAEIEHALLRHPDVVDCAVFGVPCDEYGERLVAVVQTERQDLQAEPLI EWLRGQIAGFKIPRQIEFTTALPRDDNGKIAKRRLRDAWWSDRQRRV" gene 691283..692563 /locus_tag="Rpic12D_4094" /db_xref="GeneID:8021782" CDS 691283..692563 /locus_tag="Rpic12D_4094" /inference="protein motif:PFAM:PF00654" /note="PFAM: Chloride channel core; KEGG: rso:RSc1803 hypothetical protein" /codon_start=1 /transl_table=11 /product="Chloride channel core" /protein_id="YP_002984015.1" /db_xref="GI:241665656" /db_xref="InterPro:IPR014743" /db_xref="GeneID:8021782" /translation="MKKMATRSEPLLMFGYLLRWLSLGSLVGMLAGLGSAVLLMALDW ATNTRTAHPWLLWFLPVAGLAVGLLYHYTGRSVEGGNNLLIDEIHDPKRVVPKRMAPL ILLSTVVTHIFGGSAGREGTAVQMGGSFADYLTRLFSLAPADRRILLMAGISAGFASV FGTPLAGAVFGLEVLAIGRLRYDAILPCFIAAIVGDLVPPLLGVHHTPYAIPFVPHLT PVAIGLVVVAGIVFGLAGMTFAALTHRLSRLLKRHIAFGPLRPVLGGSVVVAAALALG TDKYLGLGIPVIVDTFHNPLPAYDFAGKAAFTIVTLASGFKGGEVTPLFYIGATLGNA LGYVLPLPFPLLAGLGFVAVFAGAANTPIASTLMAMELFGPEVGTFAGIACVVSYLFS GHTGIYHAQRIGHAKRPTEAAPAGQVPAESAERP" sig_peptide 691283..691408 /locus_tag="Rpic12D_4094" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.985) with cleavage site probability 0.840 at residue 42" gene complement(692602..693312) /locus_tag="Rpic12D_4095" /db_xref="GeneID:8021783" CDS complement(692602..693312) /locus_tag="Rpic12D_4095" /inference="protein motif:PFAM:PF09339" /note="PFAM: regulatory protein IclR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein IclR; KEGG: bph:Bphy_6026 IclR family transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, IclR family" /protein_id="YP_002984016.1" /db_xref="GI:241665657" /db_xref="InterPro:IPR005471" /db_xref="InterPro:IPR013196" /db_xref="InterPro:IPR014757" /db_xref="GeneID:8021783" /translation="MGNDGVAAVEKALALLDCFKPGAEALSLAALAQASGMHKTTVYR LMNSLERMSYVIRSESGAYSLGPRLLYLGKLYEQSFHLSSVVEPVLHALAAATRESAS YYVVDHGRRLCLFRAEPSEGLRETRLPGTSLPLDDTAISHVLRYWGLGEALYDETPKL PLFTSGARDQHTAAFATPIFGSGDKFMAALTLSGAASRLEAARTSGDVVAKQLQAASD LSRKLGASAALCERFYGV" gene 693482..694180 /locus_tag="Rpic12D_4096" /db_xref="GeneID:8021784" CDS 693482..694180 /locus_tag="Rpic12D_4096" /inference="protein motif:PFAM:PF03737" /note="PFAM: Dimethylmenaquinone methyltransferase; KEGG: bch:Bcen2424_5398 dimethylmenaquinone methyltransferase" /codon_start=1 /transl_table=11 /product="Dimethylmenaquinone methyltransferase" /protein_id="YP_002984017.1" /db_xref="GI:241665658" /db_xref="InterPro:IPR005493" /db_xref="GeneID:8021784" /translation="MSTPSHNTSAIVRDIERVSPALVEAAARFQAAILADVAGRRGTL NCRVKPLAPTMKVAGPAVTVEVRPGDNLAIHAALAVAKPGDVIVVDGKGDQSCALIGE IMATQAQATGIAGFVIDGAVRDSHELANGTFPIFSAGLNPCGPTKSVAGRVNLPVSAA GATVHPGDLVVGDADGVVVIPRADVERILVLAQKKVDAEAARIAAIRKGDTRPGWLEK ELRAAGMLAEGEAL" gene 694180..695130 /locus_tag="Rpic12D_4097" /db_xref="GeneID:8021785" CDS 694180..695130 /locus_tag="Rpic12D_4097" /inference="protein motif:PFAM:PF02826" /note="PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: bch:Bcen2424_5397 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding" /codon_start=1 /transl_table=11 /product="D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding" /protein_id="YP_002984018.1" /db_xref="GI:241665659" /db_xref="InterPro:IPR006139" /db_xref="InterPro:IPR006140" /db_xref="GeneID:8021785" /translation="MSTTATKPVLLVTAADLAPQALEMLGDFEVVFAGKQPTEDDIVA LCARHKPVAIIVRYGKINARIMDAAAGNLQVISKHGSGIDVIDQDAAAARGIAVRAAV GANAAAVAEHAWALILACAKSVPQLDARMRAGHWDKATHKSVELDGRTLGLVGLGAIG RRTAAIGLAFGMKVLAFDPYTKEAPAGVQLVALGELYAQSDVVSLHCPLTAENRKMLN RDAFSCFKPGAILVNTARGGLIDEAALVEALANGRLRAAGLDSFDVEPMTVPHPFQGV ANIILSPHIGGVSDAAYVNMGKGAAANVLAVIEERASTAA" gene 695130..696086 /locus_tag="Rpic12D_4098" /db_xref="GeneID:8021786" CDS 695130..696086 /locus_tag="Rpic12D_4098" /inference="protein motif:PFAM:PF08450" /note="PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: bph:Bphy_6029 SMP-30/gluconolaconase/LRE domain-containing protein" /codon_start=1 /transl_table=11 /product="SMP-30/Gluconolaconase/LRE domain protein" /protein_id="YP_002984019.1" /db_xref="GI:241665660" /db_xref="InterPro:IPR005511" /db_xref="InterPro:IPR013658" /db_xref="GeneID:8021786" /translation="MSMFLLSPPAMREAEVFTRMPAKFRKPDVQTEWARANRGGQATD SFLEGPVWCPDGRGYGHLYVTDIPHGRVFRISPAGDWELVTEYDGEPNGMKFVDDAHL LITDYRNGLMLLDIKRGEVTPYLERRNSERFKGVNDLTFDSHGNLYFTDQGQTGLQDP TGRVYRLSPEGRLDMLLGNCPSPNGLVLSPDEKVLYVAMTRGNCVWRVPLQADGSVSK VGQFFTSYGPSGPDGLTIDTAGRLFVANPGLGRAWVLNHRAEPDMILTSPEGASLTNL CFGGPEMKTLFMTESVSGTVLKSEMDIAGPLPHRAKQTKVTP" gene 696149..697513 /locus_tag="Rpic12D_4099" /db_xref="GeneID:8021787" CDS 696149..697513 /locus_tag="Rpic12D_4099" /inference="protein motif:PFAM:PF07690" /note="PFAM: major facilitator superfamily MFS_1; KEGG: bph:Bphy_6030 major facilitator transporter" /codon_start=1 /transl_table=11 /product="major facilitator superfamily MFS_1" /protein_id="YP_002984020.1" /db_xref="GI:241665661" /db_xref="InterPro:IPR007114" /db_xref="InterPro:IPR011701" /db_xref="GeneID:8021787" /translation="MSQTLSATTPAHGADVRSAATLPDADYQASERTLAKAFRRILPF IFACYVISYLDRTNVGFAALTMNKDIGLTAEQFGFGAGLFFIGYFLFEIPSNLIMQKV GARIWIARIMITWGIFSMATAFVVGPKSFAAARFLLGLAEAGFTPGIYLYFTHWFPGK WRAKVTAAFLVGIPVANMIGSPISGALLELGGLHGLRSWQWLLLIEGLPAVLLGIACL FVLADRPEKAKWLTDDEKAVLARRLAMEQRAIASKHGTTLRDAMTNWRVFVLAFINFC GIVGSIGVGLWMPQIIKQFGVEHTVVGWLTAIPYALGAVVMLWWARMANRAQNRVPYV AAALVVAAVALAASTALDAPALKLAALCVTVSGILAFQATFWAIPSTFLTGRAAAGGL ALIVSVGNLGGFVGPSMVGAIKQYSQGFAAPLLAVSAVLLIGALSIAWLGDPGADAGE AATR" gene 697590..698915 /locus_tag="Rpic12D_4100" /db_xref="GeneID:8021788" CDS 697590..698915 /locus_tag="Rpic12D_4100" /inference="protein motif:PFAM:PF07690" /note="PFAM: major facilitator superfamily MFS_1; KEGG: bph:Bphy_6035 major facilitator transporter" /codon_start=1 /transl_table=11 /product="major facilitator superfamily MFS_1" /protein_id="YP_002984021.1" /db_xref="GI:241665662" /db_xref="InterPro:IPR007114" /db_xref="InterPro:IPR011701" /db_xref="GeneID:8021788" /translation="MQVTGSTGVTEIEQRTLRKVVWRLVPFLMLCYLLAFIDRGNVGM ASLQMNHDLGLTARVFGFGSSLFFVSYFFFEVPSNLALQRYGARIWIARIMITWGLIS AATALVSGPASFYALRFLLGAAEAGFFPGVLLYLSYWIPATHRARIVATFMVAIPAAS FIGSPISAVLLQMDGFAGLRGWHWLFILEGIPTVLLGIACLRVLTNRPEEAKWLSNEE RQWLTNTLAGEARGPKKVAQMPLLKLFCNRYVLCLALVDVCASAAGSTLSVWQPQLLK SFGLTVMQTGLLNSVPYAVASVLMVVWGRRSDRLKERRWHTAIPMLLIGLGLFGTSLS GSLVPTMVMLCAVLVGAYSFKGPFWALASGMLSNSAAAAGLATINAIANLIGGGLMVN VYGWVKQATGSYALALMPLALLTLVSVTTLLLLSRAKPEAQVLNKTETA" gene 698951..699547 /locus_tag="Rpic12D_4101" /db_xref="GeneID:8021789" CDS 698951..699547 /locus_tag="Rpic12D_4101" /inference="protein motif:PFAM:PF04909" /note="PFAM: amidohydrolase 2; KEGG: bmj:BMULJ_03819 predicted metal-dependent hydrolase of the TIM-barrel fold" /codon_start=1 /transl_table=11 /product="amidohydrolase 2" /protein_id="YP_002984022.1" /db_xref="GI:241665663" /db_xref="InterPro:IPR006992" /db_xref="GeneID:8021789" /translation="MAGASAVAAAVPGLTEAEELWSSGSATPTFKLPAGAVDCHMHIY DDRFPSAPGTTLRPPNASIEQYRKVQARLGMQRNVVVTPSTYGTDNRCTLDALKRLGP SARGVAVVDTSVTQAQLAEMHAAGVRAIRFNLSYPGATTVDMLAPLASRIGALGWHIE LVVQGAKLPALESHLLALPCPLAALPYHAAFIDDLRDG" gene complement(699780..701720) /locus_tag="Rpic12D_4102" /db_xref="GeneID:8021790" CDS complement(699780..701720) /locus_tag="Rpic12D_4102" /inference="protein motif:PFAM:PF00082" /note="PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: bcm:Bcenmc03_4466 peptidase S8 and S53 subtilisin kexin sedolisin" /codon_start=1 /transl_table=11 /product="peptidase S8/S53 subtilisin kexin sedolisin" /protein_id="YP_002984023.1" /db_xref="GI:241665664" /db_xref="InterPro:IPR000209" /db_xref="GeneID:8021790" /translation="MKDITGKSLALTLFATVALAACGGGDSGSNTASNGGNTSGNTPP ASTCAETGVDAKYACQTGSTEPLYTYQWALKQATSFFAAFGLVANGTTDINVEDAHKA GIKGQGVNVLVLDDGIDVHNEDLFANANSDMTHNFDDGLNDPTPADNPANINDAHGTN VAGIIAAAQNGKGVMGIAPRATLGGARFIGAANPDTTAAYGGANWSKNGHIINASYGA NPQAPLEYDTSTSTQAAVRAFPNLRGGRGLVMLKASGNEYESINDGINVPPRTCPTVG ATAGMIGCETPANDPEALEPGVIVVGAANAQGIKSSYSNAGSVNWITGLGGEYGNGGK YGETGSGPKIFSTDLSGCARGYSRANPDDTYDFAIAGTATNLKDNAKCDYSSMNGTSA ATPTLSGVVALMLAANPNLTWRDVREILRATARKIDADYGSRDGRNARIDLLTGAATG DTSAALTDGATTARLDYGWQTNAAGYAYSTWYGFGLVDASAAVKMAKATVAYKPAALS VPDFAAAFANVNQLNYGAVQKLGQFNVSGTDKVDALQLRVSGSVCVGSVGFFVKSPSG TVSALSLPYNGYYNNGVDTVNKYGLGSYAFYGENAAGTWEVYAVSGVPTNACAKYQPQ GGTHTVTLTTPLAVEYRVIAAK" sig_peptide complement(699780..699851) /locus_tag="Rpic12D_4102" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.993) with cleavage site probability 0.466 at residue 24" gene complement(702013..703029) /locus_tag="Rpic12D_4103" /db_xref="GeneID:8021791" CDS complement(702013..703029) /locus_tag="Rpic12D_4103" /inference="protein motif:PFAM:PF00165" /note="PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: atc:AGR_L_1441 hypothetical protein" /codon_start=1 /transl_table=11 /product="transcriptional regulator, AraC family" /protein_id="YP_002984024.1" /db_xref="GI:241665665" /db_xref="InterPro:IPR000005" /db_xref="GeneID:8021791" /translation="MSKPPHSHFDTSALPREHQFAAWRDAINVLFDSRSAAPQSHGFQ ASVDAYLCGETGVGMLSAQAQHYDRSRSKLGRDGMDVYVLQYYLEGSCGQRDGASDSA TRPGDLFIVDAAQPLATSTTDSRFLSLAVPRRLLAPLLRAPDELSMRVLRGGAPMVGL LRDHLCSLYHSVGKLSDAEAQAVIPGTLQLAAAAINCQVTEANAPAVRESLFASVCRH VQHNLSDLALSPEGVSVQFGISRATLYRLFEREGGFFNYLRMQRLRQCHAILADRSQT HRSVAEIAQTYGFSDASNFARAYRRATGMSPRETRMLAVEGRAAAMPFVQHKDWRTWV MQMR" gene complement(703117..704634) /locus_tag="Rpic12D_4104" /db_xref="GeneID:8021792" CDS complement(703117..704634) /locus_tag="Rpic12D_4104" /inference="protein motif:TFAM:TIGR00254" /note="KEGG: rso:RS04801 hypothetical protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein" /codon_start=1 /transl_table=11 /product="diguanylate cyclase" /protein_id="YP_002984025.1" /db_xref="GI:241665666" /db_xref="InterPro:IPR000160" /db_xref="GeneID:8021792" /translation="MPLQRATGALLRRPSLLIIGASALSLVLAALTALSLWEMRSDAL ARARDAADNLALILQRDIARNIEVYDLSLQAVIDGVRDPAMLALPPAVRQLVLFDRST NAQDLGSLLVTDKAGDVVIDSHSVPPRHIYLGDRDYFQVHQASDDVGLYISEPFMPRA TGLERSLGLSRRLNGPHGEFNGIVVGTLRLNYFRRLFDGINLGPHATVTLIRTDGTLL MRRPYNEKLIGRNLADATAFQKRLLAPEGSYVDIAGIDDIERLFSFRHIGDHPLIVTV GLATEDIYAEWWRRAWVISGIVLMLDAVFIVLSFLFAQQLRKRLEMEQQLHLLANTDS LTGLGTRRALDSALDVEWRRANRHHTPMAVLMIDVDDFKPYNDRYGHAAGDTALRTVA RCINDSIKRPGDFAGRYGGEEFCAVLPNTDLGGAARVAESIRAAVLAANERNAGSAYG KLTVSIGVAVHSGIAAEDDTLEDLVRLADGRLYEAKAAGRNVVMPRHERPKPAVV" sig_peptide complement(703117..703224) /locus_tag="Rpic12D_4104" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.992) with cleavage site probability 0.337 at residue 36" gene 704929..705123 /locus_tag="Rpic12D_4105" /db_xref="GeneID:8021793" CDS 704929..705123 /locus_tag="Rpic12D_4105" /inference="similar to AA sequence:KEGG:RS04800" /note="KEGG: rso:RS04800 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002984026.1" /db_xref="GI:241665667" /db_xref="GeneID:8021793" /translation="MPEPDDRASPTPAPANPHPPVADTHEEALLDEGLEETFPASDPV SVDAGKPNVPPKPPESAPKP" gene 705408..708041 /locus_tag="Rpic12D_4106" /db_xref="GeneID:8021794" CDS 705408..708041 /locus_tag="Rpic12D_4106" /inference="protein motif:PFAM:PF04329" /note="PFAM: protein of unknown function DUF470; protein of unknown function DUF472; protein of unknown function DUF471; KEGG: rso:RS04799 hypothetical protein" /codon_start=1 /transl_table=11 /product="protein of unknown function DUF470" /protein_id="YP_002984027.1" /db_xref="GI:241665668" /db_xref="InterPro:IPR007424" /db_xref="InterPro:IPR007425" /db_xref="InterPro:IPR007426" /db_xref="GeneID:8021794" /translation="MPDAASNDASPTSRRSSARTPPAAPATPVRSESGLGLAGWIVVG MVLVLGALVFDSLYALLDHVHYADMVAALQATPRSHLLLAVLATALSYVALTGYDASG LRYAGAHVAPGTVATTSFIAYALGNTVGLGSLTAGAVRTRLYTAAGLDPARVTEAVAF DAGALGVSTTAFGAVGLLWGAPHIATITHLPAPLLEVVALLVLAGVVALLVLCMRQRH VTLFGRWEVRPPPPGLAARQFAISAADMIAAAAALWVLMPAGAVDLPTFVAFYALAVT LGVLSQSPGGLGVFEAVILLGCSGQAPPAEVLAALLFYRAIYFLLPLVVAAAMLGAFE LRSGAGAPFGRAAVKLSPGLLAALTMVAGVMLLVSGVTPASDEAEDLLRMHVPLFVVE ASHMIGSVAGLIMLFVARGLLHRLDAAWWAALVLSLLTGVLALPKGIAVSEMAVLVTL AVLLVISRRQFDRPSSLFSQRLEAGWLLAMVCVFAACVWILFFAYREVAYANQLWWQF TFDGDAPRSIRALMAVAVTGLGFGMWQLFRKEPGVTTFPSDEELARAAEIVRKQPAAD ATLALMGDKSLLFSPSGNAFIMYAKQGRSWVALSDPVGAQQEWPELIWRFIEMADAHG GRAAFYKTRPQTLPLYLDAGLRAYKLGEEAYVSLPDFSLKGSRRANLRHGVTRGEREG LSFEIIPTADVPTVLDELRAISDEWLRNQNAREKGFSLGAFDDRYIRSQPVAVVRREG VIVAFATLMCPDVLRIEASVDLMRYRSDVPPGTMDFLFGKVILHFQAQGYQRFGLGMA PMSGMVEHQLAPRWHRFGRMMFRHGARFYNFRGLRNFKDKFEPVWEARYLLARGGIAP LFTLTDVAALIGGGLKGVISK" gene 708038..709804 /locus_tag="Rpic12D_4107" /db_xref="GeneID:8021795" CDS 708038..709804 /locus_tag="Rpic12D_4107" /inference="protein motif:PFAM:PF06057" /note="PFAM: virulence factor family protein; KEGG: rso:RS04798 AcvB-like protein" /codon_start=1 /transl_table=11 /product="virulence factor family protein" /protein_id="YP_002984028.1" /db_xref="GI:241665669" /db_xref="InterPro:IPR010333" /db_xref="GeneID:8021795" /translation="MSWQAPRTQEARHRGVLRKGLRLAGHVGAVGMVLAASWAIAADA PAPTSKPTPVQGAVLVPPVGMTGASGVVAVPPRGDMPPRLQMSGPAVTANKAANGGVL SLPVVAPATPAAAPGAVEFVTHGRFRDVPVYKPKGEIRSVVLMLSGDLGWTPAASRMA ESLAQQGALVAGLSTPALFASLEADPGDCAFPDGDLENFSRFLQAYEKVPGYYPPILV GDNEGGALAYAMIAQARPNIFAGAMSMEFCPVLELRKPLCKGEGVHFSRRMSESRTTA KRVKPPENAGVVLLPATKLSAPWVALQSAMPTSFARRSGPLCDARATQAFIDTISGAQ SVALPAMATGANAPPVTASEPFKTAFAKLVAQRKPPPPPPPAAVSDLPIIEVPAQPGS SSELFAVLLSGDGGWAGLDKEVAAALSKSGVPVVGIDSLRYFWTPRTPASAAADMDRL VRFYASRWKKQKALLIGYSQGADVLPFIVNRLPAASREHVALAVMMGLGKRADFEFHM TNWVSSSASGLLILPEVQKLPAGLGMCIYGKEEKDTNCPGLDPKQVQLVKLPGGHHFD GDYAKLARISLEGARAPGNASR" gene complement(709864..711585) /locus_tag="Rpic12D_4108" /db_xref="GeneID:8021796" CDS complement(709864..711585) /locus_tag="Rpic12D_4108" /inference="protein motif:PFAM:PF00916" /note="PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; KEGG: rso:RS04796 putative sulfate transporter transmembrane protein" /codon_start=1 /transl_table=11 /product="sulphate transporter" /protein_id="YP_002984029.1" /db_xref="GI:241665670" /db_xref="InterPro:IPR001563" /db_xref="InterPro:IPR002645" /db_xref="InterPro:IPR006043" /db_xref="InterPro:IPR011547" /db_xref="GeneID:8021796" /translation="MPPSNEHPAAALQHPESFAPLDAPPQPPQQRAVRDVIAGFSIAG LLLPEAVAYAGIASLPPQAGLIALLCGLVVYSLLGSSRFAIVSATSSSAAVLFATVLS EPGASSATALTMAAALIIATGVLFILAGAARLGGMSDFIARPVLRGFTFGLALTIAVK QLPKILDVTVHHSDTPRVALDLISSAASANPYSTALGAIALALLFGLGRWGRVPATLV VIVLAIAAGYWINWHSYGIAVVGHIDLQNISFGVPALNRVQWMQSAELGFALMLILYA ESYGSIRNFALKHGDGISANRDLVALGCANLLSGLLHGMPVGAGYSATSANEAAGAQS RLAGLCAAVVVALIVWLFLPELARIPEPVLAAIVIFAVSHSLHPAVFKPYWAWHRDRL VVIAALLAVLVLGVLHGLLAAIGVSLLLTLRKLSEPNVSVLGRLRESHDFVDVSLHPE AKPVPGVLIVRPEVPLFFANTERVLGKVRAMLQQPHEPALRAIMLSLEETPDVDGSAI EALRVFAAECAARGLQLMLVRLKPRALTVLQRATDSTLRAEMLHELSVDECVQSLAAT PSTPAGA" gene complement(711665..712216) /locus_tag="Rpic12D_4109" /db_xref="GeneID:8021797" CDS complement(711665..712216) /locus_tag="Rpic12D_4109" /inference="similar to AA sequence:KEGG:RS04795" /note="KEGG: rso:RS04795 alanin-rich signal peptide protein" /codon_start=1 /transl_table=11 /product="alanin-rich signal peptide protein" /protein_id="YP_002984030.1" /db_xref="GI:241665671" /db_xref="GeneID:8021797" /translation="MKLSALMFSIGALVMGSAFAQGTAAPATAPAAAPAAAPAAVHAV CKDGTPYSGATLKGACRGHGGVDKKASAGGAPAAAPAAAPAASAPAKPAAAAPAAPAA APAPAPAAKPAAAAPAKPAAAAAATVAPGGGPDKVWANASTKVYHCPGDRYYGKTKQG EYMTEADAKAAGMRPSRNKACTK" sig_peptide complement(711665..711727) /locus_tag="Rpic12D_4109" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.988 at residue 21" gene complement(712426..713352) /locus_tag="Rpic12D_4110" /db_xref="GeneID:8021798" CDS complement(712426..713352) /locus_tag="Rpic12D_4110" /inference="protein motif:PFAM:PF03466" /note="PFAM: LysR substrate-binding; regulatory protein LysR; regulatory protein MarR; KEGG: reh:H16_B1766 transcriptional regulator, LysR-family" /codon_start=1 /transl_table=11 /product="transcriptional regulator, MarR family" /protein_id="YP_002984031.1" /db_xref="GI:241665672" /db_xref="InterPro:IPR000835" /db_xref="InterPro:IPR000847" /db_xref="InterPro:IPR005119" /db_xref="GeneID:8021798" /translation="MLTDEELALLEAIRQTGSLSRAAAQLGKAPSTVSYAARQLEQRF DALLFDRRRYRLQLTRAGQLLTEEAARLAQDVSRVTQRVRQVANGWEDRLWIVTDELL EFESLMAVMHAFDALQSGVALRVTHEVLAGTWEALRDGRADLVIGATNEPPSIPNLGW FELGVVEWVFAVSPRHPLAAVDAPLTREEIARHRAVVVADSARTTAGRAYGMLSGQPT LAVPSMRAKTLAQRDGLGVGWLPRHRVASLLARGELVEKRTTDPREPNLLYVGWRSGD VDGEGRALQWWLEQLRQPRLARRLVQGIDTFA" gene 713465..714226 /locus_tag="Rpic12D_4111" /db_xref="GeneID:8021799" CDS 713465..714226 /locus_tag="Rpic12D_4111" /inference="protein motif:PFAM:PF00106" /note="PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: reh:H16_B1767 putative oxidoreductase" /codon_start=1 /transl_table=11 /product="short-chain dehydrogenase/reductase SDR" /protein_id="YP_002984032.1" /db_xref="GI:241665673" /db_xref="InterPro:IPR002198" /db_xref="InterPro:IPR002347" /db_xref="InterPro:IPR002424" /db_xref="InterPro:IPR013968" /db_xref="GeneID:8021799" /translation="MNRFEGKTVLVTGGNSGIGLAAAQAFAREGARVVITGRDAAALE TARATLGTAGGNAALAIRNETGTVAAARELTRQLQEAGVRLDAVFINAGMAKFAAVPD VEEALWDATFNANVKGAFFQMQALLPILNKGTSIVLNGSINAHIGMPNSSVYAASKAA LISLAKTLSGELIGSGIRVNVVSPGPVTTPLYGKLGLDADTLAATAAQIQGQVPLGRF GQPEEIASTVLHLSAPESAFIVGTEIIADGGMSQL" sig_peptide 713465..713548 /locus_tag="Rpic12D_4111" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.954) with cleavage site probability 0.901 at residue 28" gene 714523..715164 /locus_tag="Rpic12D_4112" /db_xref="GeneID:8021800" CDS 714523..715164 /locus_tag="Rpic12D_4112" /inference="protein motif:PFAM:PF08348" /note="PFAM: YheO domain protein; KEGG: rso:RS04794 hypothetical protein" /codon_start=1 /transl_table=11 /product="YheO domain protein" /protein_id="YP_002984033.1" /db_xref="GI:241665674" /db_xref="InterPro:IPR013559" /db_xref="GeneID:8021800" /translation="MKPTEENRLLLREGRKIVEALGKTLAPLVEVVLHDLTDPDHAVV AIANNLSGRQVGDAVTELGLARLADPDFPEVIENYANRFPDGRPAKSTSIGLKNSRGD YVAAICLNMDVSMLHAVTTGLTQLMRVDAAAPPVPESLGSRRVEDVRIALEQFAAARN TTPMAMTLDQRREAMRELAVSGLLNLRRALTEVAQTLGVARSTVYTYLPEDLA" gene 715161..716138 /locus_tag="Rpic12D_4113" /db_xref="GeneID:8021801" CDS 715161..716138 /locus_tag="Rpic12D_4113" /inference="protein motif:PFAM:PF00291" /note="PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: rso:RS04793 serine/threonine dehydratase" /codon_start=1 /transl_table=11 /product="Pyridoxal-5'-phosphate-dependent protein beta subunit" /protein_id="YP_002984034.1" /db_xref="GI:241665675" /db_xref="InterPro:IPR001926" /db_xref="GeneID:8021801" /translation="MSLPISYDDVVAAHARLQGVAHKTPVLTSATANAMTGAELFFKA ESFQRMGAFKFRGAYNALSQFTPEQRRAGVITFSSGNHAQAIALSAKLLGMRAVIVMP KDAPVVKVEATRGYGGEVVFFDRYTEDREAIGRQLAEEHGLTLIPPYDHPHVMAGQGT AAKELIEEVGPLDVLLAPLGGGGLLSGCATAARALNPACKIFGVEPEAGNDGQQSLRK GEIVHIDTPKTLADGAQTQHLGNYTFAVIRELVDDIVTVSDAELVSAMQFFASRMKAV VEPTGCLAAAAVLNGKVDVRGKRVGVILSGGNVDLQLFAKLVLGAEAAK" gene 716135..716524 /locus_tag="Rpic12D_4114" /db_xref="GeneID:8021802" CDS 716135..716524 /locus_tag="Rpic12D_4114" /inference="protein motif:PFAM:PF01042" /note="PFAM: Endoribonuclease L-PSP; KEGG: rso:RS04792 hypothetical protein" /codon_start=1 /transl_table=11 /product="Endoribonuclease L-PSP" /protein_id="YP_002984035.1" /db_xref="GI:241665676" /db_xref="InterPro:IPR006175" /db_xref="GeneID:8021802" /translation="MSDARYLNAPQLRPPAGHYSHAVCANGFVFVAGQIPVTPTGEKL VDAPFETQVRQVLSNLDAVLAAAGTDRSRLVQVRVYVTDMESHWPAFDALYSAWIGEL RPARAVVPVPTLHYGLAVEIEATAVAG" gene 716676..717557 /locus_tag="Rpic12D_4115" /db_xref="GeneID:8021803" CDS 716676..717557 /locus_tag="Rpic12D_4115" /inference="protein motif:PFAM:PF07238" /note="PFAM: type IV pilus assembly PilZ; KEGG: reh:H16_A1321 hypothetical protein" /codon_start=1 /transl_table=11 /product="type IV pilus assembly PilZ" /protein_id="YP_002984036.1" /db_xref="GI:241665677" /db_xref="InterPro:IPR009875" /db_xref="GeneID:8021803" /translation="MILQKTRQLTQEDVPVGQPLPFPLADSVGRLLLPAGAVVPDAED VRLLFHHGPVLALAEGDDIAAVPATAPAEAPPRIGSAGLSVGTVLQVQEKSAPLRGLL PCRLIGYIEGEALFVTQPADAKRTLRPEPRDVLILRGFSGRSVFTMMCSVVSVGQFPS PYLVLSAPIKMQKMPLRRAKRVQVRIGARVRAQGQAASAADRVAVIRDICLNGALVQS ANPAFQPGDRLALDFNAYVDGQLETFSLTGRVASGSPALGTTASAFPSFGVEFTLSKE QTAQLSHLIIERLDENA" gene complement(717562..718446) /locus_tag="Rpic12D_4116" /db_xref="GeneID:8021804" CDS complement(717562..718446) /locus_tag="Rpic12D_4116" /inference="protein motif:PFAM:PF00126" /note="PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RS04791 putative transcription regulator protein" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LysR family" /protein_id="YP_002984037.1" /db_xref="GI:241665678" /db_xref="InterPro:IPR000847" /db_xref="InterPro:IPR005119" /db_xref="GeneID:8021804" /translation="MRHSPEALLAFAEAATLGSFSAAARKLGKRQSTISEAIANLEID LGLTLFDRSTRQPTLTEAGHAMLTQVRRVLDASAQMDRMAAQMAGGLEARLTLVMSDT YQSDRYEQTLATLEQRYPDLELECLIAEHEDVVDIIQLGRAQIGLVAAQAAYPADIGW ATIAEQSEIGLFVGLQHPLARYGDEEVPHAILREARELRLNTFVDPTGPRTDAVPVRS LRRWSAPSYLMLLEMAVLGFGWTELPRWLVDHFAADRLHEVRARGWPRLVPVDAVWSR NRTLGQAGAWLLETMLAG" gene 718562..718999 /locus_tag="Rpic12D_4117" /db_xref="GeneID:8021805" CDS 718562..718999 /locus_tag="Rpic12D_4117" /inference="protein motif:PFAM:PF05232" /note="PFAM: transmembrane pair domain protein; KEGG: rso:RS04790 hypothetical protein" /codon_start=1 /transl_table=11 /product="transmembrane pair domain protein" /protein_id="YP_002984038.1" /db_xref="GI:241665679" /db_xref="InterPro:IPR007896" /db_xref="GeneID:8021805" /translation="MQVIQKTPAERLVHALTFELVAMLICAPLFSWLMELPLAEMGVM TLMFAAVAMVWNMVFNAIFERVERRYRLSRTLVLRVVHACLFEGGLVLMLVPLAAWWL DVGLWEAFVLDIGIMLLFLPYTFFFNLAYDHLRARWMSRRALA" gene 719114..719755 /locus_tag="Rpic12D_4118" /db_xref="GeneID:8021806" CDS 719114..719755 /locus_tag="Rpic12D_4118" /inference="protein motif:PFAM:PF00196" /note="PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: rso:RS04789 putative transcription regulator protein" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LuxR family" /protein_id="YP_002984039.1" /db_xref="GI:241665680" /db_xref="InterPro:IPR000792" /db_xref="GeneID:8021806" /translation="MPRLSVTSPHASATVLRQCYVAACAGDAVGVMNVLRDACGADHA AAMIRWRVDGRWHWAASRGARSADVLLHAVRGDGVDAWPMADAEVRGAVWLDYRKAGV PQPMQHGAAPQALLPHFAQALPLCWRRVAARAGISPAQPASLWLTDAFHLTRREADVA DLLASGSDPACIARTLGISLDTVRTHLKHVYRKTNTHSQCDVVRLMLALSARR" gene complement(719773..719991) /locus_tag="Rpic12D_4119" /db_xref="GeneID:8021807" CDS complement(719773..719991) /locus_tag="Rpic12D_4119" /inference="similar to AA sequence:KEGG:RS04788" /note="KEGG: rso:RS04788 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002984040.1" /db_xref="GI:241665681" /db_xref="GeneID:8021807" /translation="MGRRYIDCRAFPSETNCSVAISADSDAELLEAAVQHAVSVHKHT DSPELRAQLQTLFQDGTPAVAPPKMATV" gene complement(720249..720656) /locus_tag="Rpic12D_4120" /db_xref="GeneID:8021808" CDS complement(720249..720656) /locus_tag="Rpic12D_4120" /inference="similar to AA sequence:KEGG:Rmet_4996" /note="KEGG: rme:Rmet_4996 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002984041.1" /db_xref="GI:241665682" /db_xref="GeneID:8021808" /translation="MPNLPRTSRCAVSSALLLALAMTVAQTVTAQTAPAALQPSESHH TVATLSATGVQIYVCKRDGDKPLAWVFKAPLADLYDGSGKLIVKHGAGPSWEASDGSK ITGKVLQQAPNTAEAGAIPLLLLHATNAGSAGL" sig_peptide complement(720249..720341) /locus_tag="Rpic12D_4120" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.909 at residue 31" gene complement(720686..721084) /locus_tag="Rpic12D_4121" /db_xref="GeneID:8021809" CDS complement(720686..721084) /locus_tag="Rpic12D_4121" /inference="similar to AA sequence:KEGG:RS03031" /note="KEGG: rso:RS03031 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002984042.1" /db_xref="GI:241665683" /db_xref="GeneID:8021809" /translation="MALRIVRLGEPRHPDEGLRIGTVRRPPRGVPKEEFASRDFYDVW MPLLSPTPELVKQAQAAQSQHDEKAWQTFVRHFRTEMRDGDAARLLDMLAALSHQTHL SVGCYCEDEAHCHRSVLRALLEERGAKLAP" gene complement(721120..722148) /locus_tag="Rpic12D_4122" /db_xref="GeneID:8021810" CDS complement(721120..722148) /locus_tag="Rpic12D_4122" /inference="similar to AA sequence:KEGG:RS03032" /note="KEGG: rso:RS03032 putative periplasmic substrate-binding transmembrane protein" /codon_start=1 /transl_table=11 /product="putative periplasmic substrate-binding transmembrane protein" /protein_id="YP_002984043.1" /db_xref="GI:241665684" /db_xref="GeneID:8021810" /translation="MQQPRRNILRFTMAATLAASLLAGAVSTAHAEASEVRISHGYGI LYLPIMVMASEHLLEKQAKAAGLGDVKVSYRILDGGNVINDAMLSGALDIASLGVPGF LTLWDKTRGSAIEVRGLSSLSSSSMYLMTRNPNVKTLADFSDKDRIAVPGIKTSLPAV VLQMAAAKTFGDKQFNKLDPITVPLPHPDATAVMLAGGSQINSHMASPPFSYTEAAAP GLHRVFNTVDVLGNITLDMTYTSKKFYEANPKLSAAFVAALDEANALIAKDKSKAAQI YITQSKVKSSPEEVKKILDDPDSRFTTTPVGVAHYAEFMQRVGTLKNKPASWKDLFFP TVQSRQGS" sig_peptide complement(721120..721215) /locus_tag="Rpic12D_4122" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.984 at residue 32" gene complement(722452..723348) /locus_tag="Rpic12D_4123" /db_xref="GeneID:8021811" CDS complement(722452..723348) /locus_tag="Rpic12D_4123" /inference="protein motif:PFAM:PF00528" /note="PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RS03033 transmembranee ABC transporter protein" /codon_start=1 /transl_table=11 /product="binding-protein-dependent transport systems inner membrane component" /protein_id="YP_002984044.1" /db_xref="GI:241665685" /db_xref="InterPro:IPR000515" /db_xref="GeneID:8021811" /translation="MQTETLSMPATTDISNRAPVYSTPVAFERIGVVEKPLSVAERLY EQAWLRKVVILVVLALVWEGGARWLDNPLLLPTFSDTVQALWAGLASGTLFARIGTSM QTLLAGYALGLALSCALVVLGISNRLGQDFLETLTAMFNPLPAIALLPIALVWFGLGN GSLIFVIVHSVVWAVSLNTHAGFLSVSNTLRMVGRNYGLSGMGYLTKILIPAAFPSIL TGLKIGWAFAWRTLIASELVFGVSSGQGGLGWYIYENKNQLQIPEVFAGLLTVIIIGL LVENLVFRTLEARTVKRWGMQN" gene complement(723338..724132) /locus_tag="Rpic12D_4124" /db_xref="GeneID:8021812" CDS complement(723338..724132) /locus_tag="Rpic12D_4124" /inference="protein motif:PFAM:PF00005" /note="PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rso:RS03034 ABC transporter ATP-binding protein" /codon_start=1 /transl_table=11 /product="ABC transporter related" /protein_id="YP_002984045.1" /db_xref="GI:241665686" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR017871" /db_xref="GeneID:8021812" /translation="MQANSPTAPPLLDVRGVTLQYKTRQHLVTATYRVDFQVYPGERY ILLGPSGCGKSTLLKAIGGYLTPTEGEIRLKGQPVTKPGPDRMMVFQEFDQLLPWKTV KENVLFPLLSTGKLGAREAEERALHYINKVNLTKFADHHPHMLSGGMKQRVAIARGMA MEPDVLLMDEPFAALDALTRRKMQDELLQLWDETRFTVLFVTHSIPEAIRCGSRILIL SPHPGQVRAELPSLARGDDDPERFKALEAEIHDMLFARAVEETHAD" gene complement(724189..724911) /locus_tag="Rpic12D_4125" /db_xref="GeneID:8021813" CDS complement(724189..724911) /locus_tag="Rpic12D_4125" /inference="protein motif:PFAM:PF07702" /note="PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: rso:RS03035 transcription regulator protein" /codon_start=1 /transl_table=11 /product="transcriptional regulator, GntR family" /protein_id="YP_002984046.1" /db_xref="GI:241665687" /db_xref="InterPro:IPR000524" /db_xref="InterPro:IPR011663" /db_xref="GeneID:8021813" /translation="MPADLRLPRYQQLRDDLAAQIAQQHWRPGDAIPTEAELAKTYNV AVGTVRKAVDVLVAEGLLERFQGRGTFVRRASFASSLFRFFRFQSESGERRIPESRIL KRDVLDAPSAPAAGLQIETGAPVIRLTRLRLLDGAPMLAEEIWLPYDRFASLATLELN AFGDLLYPLYESHCGQIIASAEETLTAEAVNATYARLLRIQPGDPVMVIERVARGYDR VPLEWRRSRGAAAHFRYHVDIR" gene complement(725058..727334) /locus_tag="Rpic12D_4126" /db_xref="GeneID:8021814" CDS complement(725058..727334) /locus_tag="Rpic12D_4126" /inference="similar to AA sequence:KEGG:RSp1505" /note="KEGG: rso:RSp1505 nitric oxide reductase subunit B" /codon_start=1 /transl_table=11 /product="nitric oxide reductase subunit B" /protein_id="YP_002984047.1" /db_xref="GI:241665688" /db_xref="InterPro:IPR000883" /db_xref="GeneID:8021814" /translation="MKTNQRLWRWLGLIFILSFGALGYLGRQIYLAAPPIPHAVVTSV GEVLFTGEQIQRGQEAWLAAGGQQLGTVWGHGSYVAPDWSADWLHREATALQAIRAHQ QFDTDAPLTTVQQAAVDASVKEEMRRNTYDANHDILTVSRERAEAIHGVAQHFEALFG TDPSLATLRDQYAMATGVLPEAADREALAAFFFWTSWAAAADRPGETDISYTSNWPHE PLVGNTMTGGAAVWSMVSIVLLLGGIAAMLWLHGSSKHEEEAAPLPADPFLNVVATPS MKATRKYFFAVIGLMLVQIGMGAITAHYAVEGESFFGIPLAQVLPYVISRTVHTQLGV LWIATAWLATGLYIAPLLSGREPKFQKLGVDLLFWALIFIVVGSIATGWLGTLQHRGA DFGFWVGNQGLEYTSMGRVWQILLFVGLLFWVVLLGRALWPALKTPSESRGLIAMVFL SATCIGGFYSTSLVWGQHTHYSMIEYWRWWLVHLWVEGFFEVFATAVIALIFTRLGLI RASSANRAIVAETIVFLFGGILGTLHHLYFTGTPTSIISVGAVFSALEVVPLSLIGLE ALQNYRRTQGTPWLNAYKWPVLCFVAVGFWNTVGAGLLGFAINPPASLYYVQGLNMTA AHGHAALFGVYGMLGIGLMLFCLRGLYARSLHADRLLKPAFWGLNIGLAMMVFMSLLP AGIYQAWASVTKGMWYARSPEVVHSKVMETLVWLRVPGDIVFAIGALVLAWYALRLLR RPKAQQMEPLPASARATR" sig_peptide complement(725058..725156) /locus_tag="Rpic12D_4126" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.948) with cleavage site probability 0.540 at residue 33" gene complement(727367..727657) /locus_tag="Rpic12D_4127" /db_xref="GeneID:8021815" CDS complement(727367..727657) /locus_tag="Rpic12D_4127" /inference="similar to AA sequence:KEGG:Rmet_4922" /note="KEGG: rme:Rmet_4922 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002984048.1" /db_xref="GI:241665689" /db_xref="GeneID:8021815" /translation="MTQSASTIQLDLRVLAPRERHPLIFSAFGELGIGQSLELINDHD PRPLQSQFQVERPGQFSWDYLERGPGTWRVAITKVASAASAGHCCGGCGGGA" gene 727931..729430 /locus_tag="Rpic12D_4128" /db_xref="GeneID:8021816" CDS 727931..729430 /locus_tag="Rpic12D_4128" /EC_number="1.7.2.1" /inference="protein motif:TFAM:TIGR02376" /note="KEGG: rso:RS03038 major anaerobically induced outer membrane transmembrane protein; TIGRFAM: nitrite reductase, copper-containing; PFAM: multicopper oxidase type 3; blue (type 1) copper domain protein; multicopper oxidase type 2; cytochrome c class I" /codon_start=1 /transl_table=11 /product="nitrite reductase, copper-containing" /protein_id="YP_002984049.1" /db_xref="GI:241665690" /db_xref="InterPro:IPR000923" /db_xref="InterPro:IPR001287" /db_xref="InterPro:IPR003088" /db_xref="InterPro:IPR009056" /db_xref="InterPro:IPR011706" /db_xref="InterPro:IPR011707" /db_xref="InterPro:IPR012746" /db_xref="GeneID:8021816" /translation="MSRLHTVRSLMRAGLISVVLGALLAGTAARAASAKLPGDFGPPR GEPIHAVLTSPPLVPPPVHRNYPAKVIVELEVVEKEMQISEGVSYTFWTFGGTVPGSF IRVRQGDTVEFHLKNHPSSKMPHNIDLHGVTGPGGGAASSFTAPGHESQFTFKALNEG IYVYHCATAPVGMHIANGMYGLILVEPPEGLPKVDHEYYVMQGDFYTAGKYREKGLQP FDMEKAIDERPSYVLFNGAEGALTGDKALHAKVGETVRIFVGNGGPNLVSSFHVIGAI FDQVRYEGGTNVQKNVQTTLIPAGGAAVVKFTARVPGSYVLVDHSIFRAFNKGALAIL KIDGPESKLVYSGKELDSVYLGDRAAPNMSAVTKATEASVSGTLTVQDQVQAGRALFA GTCSVCHQGNGAGLPGVFPPLAKSDFLAADPKRAMNIVLHGLNGKIKVNGQEYDSVMP PMTQLNDDEVANILTYVLNSWDNPGGRVSAEDVKKVRAQPAPAKAVAEH" sig_peptide 727931..728026 /locus_tag="Rpic12D_4128" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.815 at residue 32" gene 729447..730238 /locus_tag="Rpic12D_4129" /db_xref="GeneID:8021817" CDS 729447..730238 /locus_tag="Rpic12D_4129" /inference="protein motif:PFAM:PF03781" /note="PFAM: protein of unknown function DUF323; KEGG: rso:RS03039 signal peptide protein" /codon_start=1 /transl_table=11 /product="protein of unknown function DUF323" /protein_id="YP_002984050.1" /db_xref="GI:241665691" /db_xref="InterPro:IPR005532" /db_xref="GeneID:8021817" /translation="MSRLTSHIAAMLMALASATAHGATYVRLPGGDFDSVLPQNAPGQ PQRVRIEPFELRSTPVTIGEFQAFVQRHEAWQRGRVPQVFAGKAYLADWADATHADAQ ASLQAPVTGVSWFAARAYCENEGARLPTWLEWESAAAADATRTDARDDPQWAQRILGW YERPATRVLPPVGGPADVHGVRDMHGLIWEWVDDFNALFIAGDSRTQGDPDKQKFCGA GAISIVRRDSYAVLMRVALLSSLEGADATGSLGFRCARSLNGDHP" sig_peptide 729447..729515 /locus_tag="Rpic12D_4129" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.995 at residue 23" gene 730235..730819 /locus_tag="Rpic12D_4130" /db_xref="GeneID:8021818" CDS 730235..730819 /locus_tag="Rpic12D_4130" /inference="protein motif:PFAM:PF02630" /note="PFAM: electron transport protein SCO1/SenC; KEGG: rso:RS03040 signal peptide protein" /codon_start=1 /transl_table=11 /product="electron transport protein SCO1/SenC" /protein_id="YP_002984051.1" /db_xref="GI:241665692" /db_xref="InterPro:IPR003782" /db_xref="GeneID:8021818" /translation="MMFTTFIRRAFVVLLLAGATAGAHAAGPAPSASLYQSDVALTDQ NGRVFHLADLRGEPVLVSMFYASCQMVCPMIFETIRATLAKGGKPAHDGVRVLMMTVD PERDSVAALKKTASAHGADDRWQVARANASGTREVAALLGVQYRRLADGDFNHSSTIL LLDAEGRINARTNTLGAVDPKLVDAMRKLVAAQR" sig_peptide 730235..730312 /locus_tag="Rpic12D_4130" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.999 at residue 26" gene complement(730838..731686) /locus_tag="Rpic12D_4131" /db_xref="GeneID:8021819" CDS complement(730838..731686) /locus_tag="Rpic12D_4131" /EC_number="4.1.1.68" /inference="protein motif:PRIAM:4.1.1.68" /note="PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: reh:H16_A0072 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase" /codon_start=1 /transl_table=11 /product="5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase" /protein_id="YP_002984052.1" /db_xref="GI:241665693" /db_xref="InterPro:IPR002529" /db_xref="GeneID:8021819" /translation="MKLVRVGAPGAERPGLIDTQGRVRDLSGVVSELGPQQLSDAALA RLAGVDMASLPVLPDARFGVPWTGIGKIIAIGLNYADHAAEAGLPPPAEPIIFLKANS ALNGPNDAVMLPRGSEKTDWEVELGVVIGKTASDVSREAALSHVAGYCVVNDVSEREF QLERGGTWDKGKGCDTFCPVGPWLVTRDEVPDPQALGLWLDVNDERAQRGNTATMVFG VAHLVSYVSRFMTLHPGDLICTGTPPGVGMGAKPPRYLKAGDTMRLGIDGLGEQMQTV VAYTKA" gene complement(731683..732570) /locus_tag="Rpic12D_4132" /db_xref="GeneID:8021820" CDS complement(731683..732570) /locus_tag="Rpic12D_4132" /inference="protein motif:PFAM:PF07729" /note="PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: reh:H16_A0071 transcriptional regulator, GntR-family" /codon_start=1 /transl_table=11 /product="transcriptional regulator, GntR family" /protein_id="YP_002984053.1" /db_xref="GI:241665694" /db_xref="InterPro:IPR000524" /db_xref="InterPro:IPR011711" /db_xref="GeneID:8021820" /translation="MIGLCCATWLSIGYVICNYNICKSLILLHTKSIISVCDSLLWCI FPILVTSVTQPLLQSPRLRTLGMSAEIASRLRTLIEEGELPPGARIDERAFCEMFDVS KTPLREALKVLVAEGLVLHRQYIGYRVAPLDLDELRATFETLHGLEFTAGELAAARLS EVALARLERRHQAMLDAHAAGRRTEYFRINQEIHQLIIDGTANPVLAGIYAALMSRVH RARGAANADMLRWQESHEEHEAIMAALREPGRPRLAQVLRHHSENTAKEVLSVVANSL AEASRPTRSTKESPKKGAQ" gene 732681..733988 /locus_tag="Rpic12D_4133" /db_xref="GeneID:8021821" CDS 732681..733988 /locus_tag="Rpic12D_4133" /inference="protein motif:PFAM:PF07690" /note="PFAM: major facilitator superfamily MFS_1; KEGG: bph:Bphy_4990 major facilitator transporter" /codon_start=1 /transl_table=11 /product="major facilitator superfamily MFS_1" /protein_id="YP_002984054.1" /db_xref="GI:241665695" /db_xref="InterPro:IPR007114" /db_xref="InterPro:IPR011701" /db_xref="GeneID:8021821" /translation="METASQAPAMALTETKSSVRWKIFLMMLMLISINYVDRASLSVA MPLIAKEFNIGPAVQGLLLSSFFLTYALMQIPGGMLADRFGPRVVIAGATLGWGFFQS IAALCTGWVPLLVTRLGLGAAEAPIYPAGGKLNAIWMTQNERGRGATLLDGGAPLGAA LGALIIAGLIAEFNSWRTSFVVAGIGTMVAGLFAWWYIRNHPREHPSVNDAEAAYIEE AHAADQAAEPAALSGNVLDFFKYRSVWGMFFGWMCFNALFYGLLTWMPTYLSKVHGLD IKEMGGAVFTMFFSGFVGEMVGGWIADKWMATGASRARVLRTLFGIASVLATIAIYTV ARFKDPVVVVALLSTTLFFLRWCGLFWCIPSILGTRKRVGFLGGTMNLGGNFAGVGMP IIVGLIVQATGSYDMALMLFAAAGAGLFICSTLLIDYSKKLPV" gene 734151..734879 /locus_tag="Rpic12D_4134" /db_xref="GeneID:8021822" CDS 734151..734879 /locus_tag="Rpic12D_4134" /inference="protein motif:PFAM:PF01177" /note="PFAM: Asp/Glu/hydantoin racemase; KEGG: reu:Reut_A0046 Asp/Glu racemase" /codon_start=1 /transl_table=11 /product="Asp/Glu/hydantoin racemase" /protein_id="YP_002984055.1" /db_xref="GI:241665696" /db_xref="InterPro:IPR015942" /db_xref="GeneID:8021822" /translation="MKKRIKLGMLTPSSNTALEPITSAMVSGLPNVSAHFSRFTVTEI SLRDQALGQFDLENILNAAKLLADAHVDVIAWNGTSSGWLGFEKDEALCRQITEATGI PATTSVLALNEILAKTGARDFALVTPYLDDVQQRIVQNYARHGFKCVAERHLDLHVNH SFADVEEDTIRTLVREVAQQKPAAITTFCTNLRAAHLVEALEAETGIPVYDTISTVVW KSLRLAGVDTRELHGWGRLFADVA" gene 734901..736316 /locus_tag="Rpic12D_4135" /db_xref="GeneID:8021823" CDS 734901..736316 /locus_tag="Rpic12D_4135" /EC_number="3.5.2.2" /inference="protein motif:TFAM:TIGR02033" /note="KEGG: reh:H16_A0068 dihydropyrimidinase; TIGRFAM: dihydropyrimidinase; PFAM: amidohydrolase; Amidohydrolase 3" /codon_start=1 /transl_table=11 /product="dihydropyrimidinase" /protein_id="YP_002984056.1" /db_xref="GI:241665697" /db_xref="InterPro:IPR006680" /db_xref="InterPro:IPR011778" /db_xref="InterPro:IPR013108" /db_xref="GeneID:8021823" /translation="MSTELDLVIRNADVVTASDRFTCDIGVRDGRIAVLGNGLPRGVR ELDASGLLALPGGVDGHCHLDQPMPDGMRMADDFFTGTRAAICGGTTTVIPFAAQEKG GSLKAAVADYHRRAEGRAVADYGFHLIVADPTPEVLKHELPELIHQGYTSFKVYMTYD DLKLSDREMLDVLDVAKQNNALVMVHAENADCISWLTEKLVGEGRISPRFHGLSRPAA VEREATHRAITFAELVDVPILIVHVSGKEAIEQIRWAQSRGLQILAETCPQYLYLTAE DMGLHGDDGYEGAKCVCSPPPRDPENQAAVWRALAGGVFSVFSSDHAPFNYDDAQGKK LGGLAQPFDHIPNGVPGIETRLPLLFDGIARGKLSLHQFVELTSYRPARLYGLYPRKG TIAVGADADITLWDPERRVRITNDALHHAVDYTPYEGIEVTGWPVHCFSRGELLVENG KYLEPAPGRGQFLPAGAPSLV" gene 736347..737084 /locus_tag="Rpic12D_4136" /db_xref="GeneID:8021824" CDS 736347..737084 /locus_tag="Rpic12D_4136" /inference="protein motif:PFAM:PF01177" /note="PFAM: Asp/Glu/hydantoin racemase; KEGG: rme:Rmet_3885 Asp/Glu racemase" /codon_start=1 /transl_table=11 /product="Asp/Glu/hydantoin racemase" /protein_id="YP_002984057.1" /db_xref="GI:241665698" /db_xref="InterPro:IPR015942" /db_xref="GeneID:8021824" /translation="MRILVVNPNISESVTELIHAEARRSVSPGTTLTMATAPFGVAYI ETRFEALVGGYATACVVAEHAGQFDGVVVAAFGDPGLAGIKELCNVPVVGMTEAALAS ACLLGQRFSIIAISNRIQAWYRECVAANGLSSRLASVRSLQQPLRDIGSVQEDHAARL EELSLQAVREDGADVIIVAGAPLAGLARTLKDRIPVPVVDGVSSAIRHCESLIALAPN GAAEGSFTRPPHKPNRGLPPALAAMLA" gene complement(737499..737687) /locus_tag="Rpic12D_4137" /pseudo /db_xref="GeneID:8021825" gene complement(737760..738464) /locus_tag="Rpic12D_4138" /db_xref="GeneID:8021826" CDS complement(737760..738464) /locus_tag="Rpic12D_4138" /inference="protein motif:PFAM:PF00027" /note="PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: bra:BRADO5261 transcriptional regulator" /codon_start=1 /transl_table=11 /product="putative transcriptional regulator, Crp/Fnr family" /protein_id="YP_002984058.1" /db_xref="GI:241665699" /db_xref="InterPro:IPR000595" /db_xref="GeneID:8021826" /translation="MAEHDTNSRPGISRARLAHIAAWSIDLPAEEADRACAGIVEKTY ARGACICPKNTLLESWTGVVTGLIKIGTVSPEGRSVTFTGVPAGGWFGEGTVLKNEPR RYDIVALRDTRMAFMERATFMWLVENSVAFNRFLVKQLNERLGHFMALLEYDRLLDVT PRLARCIASLFNPVLYPGAGDHLEITQEELGLLSGMTRQVANQSLKTLEKDGVVRLEY GGVTVVDLDRLRSYGA" gene complement(738457..739092) /locus_tag="Rpic12D_4139" /db_xref="GeneID:8021827" CDS complement(738457..739092) /locus_tag="Rpic12D_4139" /inference="protein motif:PFAM:PF01323" /note="PFAM: DSBA oxidoreductase; KEGG: bcm:Bcenmc03_4802 DsbA oxidoreductase" /codon_start=1 /transl_table=11 /product="DSBA oxidoreductase" /protein_id="YP_002984059.1" /db_xref="GI:241665700" /db_xref="InterPro:IPR001853" /db_xref="GeneID:8021827" /translation="MPATVDWFFDVISPFAYLQLEQFDALQKANDIVIRPRPLVLGAI LHHWGQKGPAEISTKRVFTYRHALFRAQQLGIPFRMPPAHPFNPIKALRLTIAMGGSL DVVRAVFRHIWRDGNDVASPEGFAALCEAVGFAEGAAAVEQPAVKDALRAHTDAAIAL GVFGVPTLVHEGELFWGEDATAMFLQSLRAGWLSTPEAQRVSTLPVGIQRG" gene complement(739102..739776) /locus_tag="Rpic12D_4140" /db_xref="GeneID:8021828" CDS complement(739102..739776) /locus_tag="Rpic12D_4140" /EC_number="2.8.3.9" /inference="protein motif:TFAM:TIGR02428" /note="KEGG: fal:FRAAL3149 acetyl-CoA:acetoacetyl-CoA transferase, beta subunit; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase" /codon_start=1 /transl_table=11 /product="3-oxoacid CoA-transferase, B subunit" /protein_id="YP_002984060.1" /db_xref="GI:241665701" /db_xref="InterPro:IPR004165" /db_xref="InterPro:IPR012791" /db_xref="GeneID:8021828" /translation="MQALPETPKQRIAARCAQELHPGEVVNLGLGIPTLTANYLDAEA GVIFHTENGAFGFGGRPALDAIDSDFTNAGCEPITLMPGAALMDLATSLGAMRNGYID VTILGALQVDALGNLANWACDRNGKWWPGIGGAMDLCYGTRKVIAALAHTDKHGNSKI LPRCTLPLTGRACVKVIVTEHAVFDVTDAGLVLREILSHATLDDIRAMTAAPFTLAPL LQMRAA" gene complement(739805..740569) /locus_tag="Rpic12D_4141" /db_xref="GeneID:8021829" CDS complement(739805..740569) /locus_tag="Rpic12D_4141" /inference="protein motif:PFAM:PF01144" /note="PFAM: coenzyme A transferase; KEGG: cbt:CLH_1917 CoA-transferase, A subunit" /codon_start=1 /transl_table=11 /product="coenzyme A transferase" /protein_id="YP_002984061.1" /db_xref="GI:241665702" /db_xref="InterPro:IPR004165" /db_xref="GeneID:8021829" /translation="MRYANKVLSVDEAIAHVRSGSRLMLGEFVGAGEPACCIEALLAS GIGQLTLITNTPGLRGGFLKARLFSSGQLAEFIGTHVGTTDESTQAYLTDSVHVAEFF PMGTWAEKVRAGALGLGGALVPVGVSILDQPGMFPKRGAPKQTLTVDGTTCFVEPPLR ADVSIIKGWRADTFGNVEFRGTALQNQRDIAMAGDYTIVEVNEIVEVGTIPPERVGCP GVFVNAVVQGLSLDDQHALYRHHWTKLGRLPAAAEA" gene 740808..742025 /locus_tag="Rpic12D_4142" /db_xref="GeneID:8021830" CDS 740808..742025 /locus_tag="Rpic12D_4142" /inference="protein motif:PFAM:PF00999" /note="PFAM: sodium/hydrogen exchanger; KEGG: rso:RS03045 cation-efflux system transmembrane protein" /codon_start=1 /transl_table=11 /product="sodium/hydrogen exchanger" /protein_id="YP_002984062.1" /db_xref="GI:241665703" /db_xref="InterPro:IPR006153" /db_xref="GeneID:8021830" /translation="MHVDTPLISTIIGGIVLAFIFGTIAQRLRLPPLVGYLMAGVVAG PFTPGFVADQSLAPQLAELGVILLMFGVGLHFSMKELLAVKAIAIPGAIGQIALATLM GMGLAWLLGWDWGPGLVFGLALSVASTVVLLKALEDRGIDNSHEGHIAVGWLIVEDLV MVVTLVLLPALAGALGGAGSTAVGAWDIIKVLAVTLSKVVAFAALMLVVGRRVIPWML ERIVMTGSRELFRLGVLATALGVAYGATVLFGVSFALGAFFAGMVLAESEFSQRAAEE SLPLRDAFAVLFFVSVGMLFDPSVLIEDPWAVLGTVLIVVVGKSLAAFAVVRAFGHGN RTALTISASLAQIGEFSFILIGLGISLEILPDRARGLLLSAAILSILLNPLMFALINR LKREVAPEPATAD" gene 742069..742623 /locus_tag="Rpic12D_4143" /db_xref="GeneID:8021831" CDS 742069..742623 /locus_tag="Rpic12D_4143" /inference="protein motif:PFAM:PF03358" /note="PFAM: NADPH-dependent FMN reductase; KEGG: rso:RS03046 hypothetical protein" /codon_start=1 /transl_table=11 /product="NADPH-dependent FMN reductase" /protein_id="YP_002984063.1" /db_xref="GI:241665704" /db_xref="InterPro:IPR005025" /db_xref="GeneID:8021831" /translation="MSNLTIGVIVGSLRKASFNRQLAQALSGLLPSGATAQFIEIGEL PLYNQDLDASLPEPVQRFKAAVAGVDALLFVTPEYNRGIPGVLKNAIDWGSRPYGQSV WDGKPAGIAGASPGAIGTALSQAQLRNVLAAVGVKVLPLPEVFFHFAGEPFDAQGGVT DARTRQFLQGFVDRFVQWAGQKPA" gene complement(743035..743718) /locus_tag="Rpic12D_4144" /db_xref="GeneID:8021832" CDS complement(743035..743718) /locus_tag="Rpic12D_4144" /inference="ab initio prediction:Prodigal:1.4" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002984064.1" /db_xref="GI:241665705" /db_xref="GeneID:8021832" /translation="MAPFITEWYRRWGRCVRYICAAVWITFAGMAPWSPTGAAPKFAY PVTQRIDASASLALPRTWGPLRLTSETPIPSIAATINSPFGPSRLVFAQQTVAPESFA LVTVRKSDFDKGTPGYLETLRPRDLAILLNHMESRVHGDRPAWAARLVRGKAPALQVL AGRRVLYWEGEWSTSAARTVVVRGYAFFGNGAVYLLRIFGTASGSEPVEFAEEARFAD LVAATFHTK" gene 744008..744715 /locus_tag="Rpic12D_4145" /db_xref="GeneID:8021833" CDS 744008..744715 /locus_tag="Rpic12D_4145" /inference="protein motif:PFAM:PF00583" /note="PFAM: GCN5-related N-acetyltransferase; KEGG: bav:BAV1624 acetyltransferase" /codon_start=1 /transl_table=11 /product="GCN5-related N-acetyltransferase" /protein_id="YP_002984065.1" /db_xref="GI:241665706" /db_xref="InterPro:IPR000182" /db_xref="GeneID:8021833" /translation="MTTLNAYQQPIGAPLSSWTARPLPPHTPLAGRYCRLEPLDAARH ADALFEAFSQAQDDRVWTYMVEGPFANVAAHRAYIERIAAKRDPLQYAVIDARNDQPV GTLALMRVTPEHGVIEVGAVTFSPLLQRTPASTEAQFLLMKHVFEDLGYRRYEWKCDS LNAPSRQTAQRLGFLFEGIFRQAVVYKGRSRDTAWFSIIDADWPQARAAFEQWLSPEN FDEDGRQRASLAALRSA" gene complement(744725..746338) /locus_tag="Rpic12D_4146" /db_xref="GeneID:8021834" CDS complement(744725..746338) /locus_tag="Rpic12D_4146" /inference="similar to AA sequence:KEGG:RS03125" /note="KEGG: rso:RS03125 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002984066.1" /db_xref="GI:241665707" /db_xref="GeneID:8021834" /translation="MTSAASDALPPTVPTDPDRERAPSRNFFARHWRGDYSLARAYWL HTALMQFGVVALSAGVTHALAHNAPARAASSALLVIYVMGLALWIWAVVGTWRSADRE QARNRLAGLSNPWPLIAKVMIVLGAVGTCSRLINDGPRLVAHLRTALGEQAASPYAVM PQRDGRAILFNGGINDGAADALEAALRKAPNATAVVLRSEGGWLREGTLVADVIRRHH LRTYVERACASACTIAFLAGADRAAAPGARIGFHRPRAVGADHDQTPGATDSELWRAY SDAGLPDAFVRRVQDTPFDQMWFPTAQELLANHVVTRTSPGGEYATMATQLNTREALA AELRSAPLYATLERKYPAHFSRLIDTLGPELQRNVTDAQVVTLLREQTGKLYRALIPT APDALLFANAQLTLEQAQALQRVSPEACVAYLDGTSGASAAAARLPRALVTREQALFS DLMQAADPDHAPVVTRAQTLPVLQLAMAALPLNEQRVLTVPALRRTAPPAERCRALIG FSRSILALPEAERALALRGMYADTSAPDA" gene complement(746497..747009) /locus_tag="Rpic12D_4147" /db_xref="GeneID:8021835" CDS complement(746497..747009) /locus_tag="Rpic12D_4147" /inference="similar to AA sequence:KEGG:RS03126" /note="KEGG: rso:RS03126 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002984067.1" /db_xref="GI:241665708" /db_xref="GeneID:8021835" /translation="MKGVLISEMAMQLSSPSVSTATAGASGSGTSSAPDIERLQRQLK NLQKSMQDLPAQNLPPDQAREQAQLLSQQIQIVQAQIARLQAQNGLEQAETRLENRHN ASKSASGTSTTDATTQARTTAKVTGSSTLSDARLQARHATQAQAAQAAHPASAEAITP AEPPLVSVKA" gene 747268..748089 /locus_tag="Rpic12D_4148" /db_xref="GeneID:8021836" CDS 747268..748089 /locus_tag="Rpic12D_4148" /inference="protein motif:PFAM:PF00005" /note="PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sml:Smlt2573 putative ATP-binding ABC transporter protein" /codon_start=1 /transl_table=11 /product="ABC transporter related" /protein_id="YP_002984068.1" /db_xref="GI:241665709" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR017871" /db_xref="GeneID:8021836" /translation="MLSSPPAASGRLHAGLPAVQLNQVSVRFGSFTAVQGVDLSIGEG EFVAVVGPTGCGKSTLLNAVTGLLKPAGGTVSVFGEPLTGLNGKAGFMMQQDSLLPWK TALDNVALGLVFQGMPVDEARERARPWMKKVGLAGFEARYPHQLSGGQKKRISMAQTL ILSPKIVLMDEPFSALDVHTRHLMQSELLRLWQEDRKSLLFITHDLEEAIALADRVVV MSAGPASRPVGDVGITLPRPRNVSEINMSDAFIRLYREIWSILGTEVEKSHAVQH" gene 748073..748903 /locus_tag="Rpic12D_4149" /db_xref="GeneID:8021837" CDS 748073..748903 /locus_tag="Rpic12D_4149" /inference="protein motif:PFAM:PF00528" /note="PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sml:Smlt2572 putative transmembrane permease ABC transporter protein" /codon_start=1 /transl_table=11 /product="binding-protein-dependent transport systems inner membrane component" /protein_id="YP_002984069.1" /db_xref="GI:241665710" /db_xref="InterPro:IPR000515" /db_xref="GeneID:8021837" /translation="MPSSTNTMPAVGAQRTGLAHKTKIRLFQLAVVVLMFGSWEGLGR AGVVDPFYFSMPSSIVARIWEWFTAGDIYTHLAITLAETILSFGIGTLLGISLGLWLG LSRLAAEVLDPFIKVFNAIPRILLAPIFVMWFGLGLTSKVALGATMVLFITFFNTYQG VREVNPVILANARLLKASRISLLRHVYVPSATSWILSSLRASVGMAVMGAIVAEYLGS SAGLGHLIAQAEGVFDATGVFSGIVVLSAFVIALDRSVDALEGKLLVWRPKVDPETSA" gene 748937..749941 /locus_tag="Rpic12D_4150" /db_xref="GeneID:8021838" CDS 748937..749941 /locus_tag="Rpic12D_4150" /inference="protein motif:PFAM:PF09084" /note="PFAM: NMT1/THI5 like domain protein; Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3; KEGG: mlo:mll6979 ABC transporter, periplasmic substrate-binding protein" /codon_start=1 /transl_table=11 /product="NMT1/THI5 like domain protein" /protein_id="YP_002984070.1" /db_xref="GI:241665711" /db_xref="InterPro:IPR001638" /db_xref="InterPro:IPR007210" /db_xref="InterPro:IPR015168" /db_xref="GeneID:8021838" /translation="MKRWISALLCAAVCSAANAAEPEKKDVSLSVGSMILNYMPVPLT QSLGNFQKEGLNVKVENFQAGGSKALQALIAGSTDAVVGFYDHTIHIQAQGKDIVSVA LLNVTPGIVLAVRPDLDIKSGKDLKGKKIGITAPGSSTDLFARYYAIKNGLQVNDVSY VAVGSGAPGMVALDRKEIDALVNFDPVASLLEKRRAAKFLVDTRTDAGSNAVFGGRYP TATLYVTRDFMTKNPETVQRLVNAFIRTLKWIDASTPEAIADKMPKEQQVGGRDVFVD ALRHSKPIFSKDGLMTDADAKVALTVLSSYDEKIRSARIDLAKTYTNRFVDQALKTVK" sig_peptide 748937..748996 /locus_tag="Rpic12D_4150" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.999 at residue 20" gene 749962..750756 /locus_tag="Rpic12D_4151" /db_xref="GeneID:8021839" CDS 749962..750756 /locus_tag="Rpic12D_4151" /inference="protein motif:PFAM:PF09339" /note="PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: bpy:Bphyt_4012 transcriptional regulator, IclR family" /codon_start=1 /transl_table=11 /product="transcriptional regulator, IclR family" /protein_id="YP_002984071.1" /db_xref="GI:241665712" /db_xref="InterPro:IPR005471" /db_xref="InterPro:IPR014757" /db_xref="GeneID:8021839" /translation="MTAERQTTQNETTPAANEGDAATPGQSGVAALDRAFSILFAFRP GDYALTLAELAARTGLYKSTILRLAGSLIQHRMLFRLEDGRYQIGAAPLMLGALYQRS MRLGDVVLPHMRALAEATGEAVSLYIRERDVRVCLHRVDSNHSIRDHVREGDVLPLER GSGGRVLCAFSGMQGATYDAIRRDHYYVSIGERDRETVGLSVPVFGAQQALRGALCLA GPASRIDGALLQSWRVPVLEHAAQITSTLGGDPAPLRLAAQLISKT" gene 750828..752015 /locus_tag="Rpic12D_4152" /db_xref="GeneID:8021840" CDS 750828..752015 /locus_tag="Rpic12D_4152" /inference="protein motif:PFAM:PF02515" /note="PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bpy:Bphyt_4014 L-carnitine dehydratase/bile acid-inducible protein F" /codon_start=1 /transl_table=11 /product="L-carnitine dehydratase/bile acid-inducible protein F" /protein_id="YP_002984072.1" /db_xref="GI:241665713" /db_xref="InterPro:IPR003673" /db_xref="GeneID:8021840" /translation="MALPLAGLRVLDLSNVLAGPFCGYQLGLLGAEVIKVEVPGNGDL ARRLGADPEQARRKMGASFVAVNAGKQSVTVNLKHPEGRAILLKLVAQADALIENYRP GVMDRLELGYDVLREVNPRLVYCAISGFGKDGPLSGRPAYDQIIQGISGVMSVTGDDA SAPLRVGYPISDTVGGITAALAVTACLLGAQRTGQGCMVDVSMLESTLATMGWVVSNY LNAGVTPQPMGNQNFTAAPSGTFTTGDGLINIAANEDKQFAALCRVVGHPELATDARF AERHARKEHRQQLNDALEAALAARPATEWEPLLIDAGVPAGLVLDVPGVLAHEQVTGR GFVTAFPEAGQHVTRAGFRLSGEDPCPQTPAPMLSAHTDDWLTRLGYRHDQIEALRAE GAI" gene 752018..752872 /locus_tag="Rpic12D_4153" /db_xref="GeneID:8021841" CDS 752018..752872 /locus_tag="Rpic12D_4153" /inference="similar to AA sequence:KEGG:Bphyt_4013" /note="KEGG: bpy:Bphyt_4013 citrate synthase" /codon_start=1 /transl_table=11 /product="citrate synthase" /protein_id="YP_002984073.1" /db_xref="GI:241665714" /db_xref="GeneID:8021841" /translation="MTTAPTQDAAGLAADYWRTDIIDIEPGRIHVRGYPIQELIGQIG FAEMIWLMLRGELPAKRQAVLLEAALVASVDHGPHAPSIAIAKMATSCGLPLNGAMAS ALNALDDVHGGAGQQAVELFHDIEARMFDGASLEAATAAGVDAFIAAHGKYLPGFGHR FHPVDPRAGRLLALVDEAAQDGVVGGRYAAIGRAIEALLSSRKGKPIPMNIDGATAVI YAELGFAAPLARGVFCLSRAVGILAHAWEQSGRGERNKGPMPRQLPYRYTGHATRHLA QAEPAPAP" gene 752869..753765 /locus_tag="Rpic12D_4154" /db_xref="GeneID:8021842" CDS 752869..753765 /locus_tag="Rpic12D_4154" /inference="protein motif:PFAM:PF08450" /note="PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: pol:Bpro_4512 gluconolactonase" /codon_start=1 /transl_table=11 /product="SMP-30/Gluconolaconase/LRE domain protein" /protein_id="YP_002984074.1" /db_xref="GI:241665715" /db_xref="InterPro:IPR013658" /db_xref="GeneID:8021842" /translation="MTYFNWPVIETTVFAEMPVALRRPVPTEWSRANKGGAPVDCFLE GPCWDAHGNLWLVDIPHGRILRVSSQGDWDVVAEYDGEPNGLALRHDGTLLIADYKNG LLSLDPATGAVTPFLTRRNSERFKGPNDLIVARNGDVYFTDQGQTGLHDPTGRVYRLR TDGRLDCLLANGPSPNGLVLTPDESALFVAMTRDNAVWRLPLLADGSTSKVGRFAQFY GTSGPDGMAMDAAGHLFVAHASLGAVFVVSPHGEPLARIASCRGRTTTNVALTPDGHS LVITESATGTILRARWTPPPHD" gene 754626..754943 /locus_tag="Rpic12D_4155" /db_xref="GeneID:8021843" CDS 754626..754943 /locus_tag="Rpic12D_4155" /inference="protein motif:PFAM:PF05247" /note="PFAM: flagellar transcriptional activator; KEGG: rso:RSp1413 transcriptional activator FlhD" /codon_start=1 /transl_table=11 /product="flagellar transcriptional activator" /protein_id="YP_002984075.1" /db_xref="GI:241665716" /db_xref="InterPro:IPR007911" /db_xref="GeneID:8021843" /translation="MDTQDIVSEISELNLTYLMLAQQMLAKDRDAALFRLGISEELAD ILLTMSPAQIVKLASTNMMLCRFRFDDHAILGLVTQPHRDKGLQQSQMSILLARQAVE QIS" gene 755021..755581 /locus_tag="Rpic12D_4156" /db_xref="GeneID:8021844" CDS 755021..755581 /locus_tag="Rpic12D_4156" /inference="protein motif:PFAM:PF05280" /note="PFAM: flagellar transcriptional activator FlhC; KEGG: rso:RSp1412 transcriptional activator FlhC" /codon_start=1 /transl_table=11 /product="flagellar transcriptional activator FlhC" /protein_id="YP_002984076.1" /db_xref="GI:241665717" /db_xref="InterPro:IPR007944" /db_xref="GeneID:8021844" /translation="MRHTSVMNEVEQIHLAAELISLGARLQLLEQETTLSRERLVKLY KEIRGESPPKGMLPFSADWFLTWSPNIHSSIFLNIYRFLGENSRSTGVRRLISAYKLY QEHIHVHEQEEVLSITRAWMMLKFFEGKMLHTVKCKRCTGHFVAHADDLHHDFVCGVC QPPSRAGKKKRVAAPVDAIAEKTIDA" gene 756122..756982 /locus_tag="Rpic12D_4157" /db_xref="GeneID:8021845" CDS 756122..756982 /locus_tag="Rpic12D_4157" /inference="similar to AA sequence:KEGG:RSp1411" /note="KEGG: rso:RSp1411 flagellar motor protein MotA" /codon_start=1 /transl_table=11 /product="flagellar motor protein MotA" /protein_id="YP_002984077.1" /db_xref="GI:241665718" /db_xref="InterPro:IPR000540" /db_xref="GeneID:8021845" /translation="MLVAIGYIVILASVFGGYMLAGGHLGPLFQPTELLIIFGAGIGA FVVGNDKKAINATVKALPGLFKGSKYTKALYMEVMALLYVVLSKIRREGMMSIEADIE NPHESTLFANYPAIQADHHALDFICDYLRLMVGGNLNPFQIEALMDQEIDTHHHEAEQ PARIITKVGDAMPAFGIVAAVMGVVHTMGSVGLPPAELGKLIASALVGTFLGILLAYG FIGPLGSLLEQRAEESTKLFQCIKVTLLASMNGYAPAIAVEFGRKVLFSTERPSFAEL EDHVRGAKTA" gene 757183..758130 /gene="motB" /locus_tag="Rpic12D_4158" /db_xref="GeneID:8021846" CDS 757183..758130 /gene="motB" /locus_tag="Rpic12D_4158" /inference="protein motif:PFAM:PF00691" /note="PFAM: OmpA/MotB domain protein; KEGG: rso:RSp1410 flagellar motor protein MotB" /codon_start=1 /transl_table=11 /product="OmpA/MotB domain protein" /protein_id="YP_002984078.1" /db_xref="GI:241665719" /db_xref="InterPro:IPR006665" /db_xref="GeneID:8021846" /translation="MSKSSTPTFIVIRRNKKGGHGHHGGAWKIAYADFVTAMMAFFLL MWLLSSVTKAELSSVETYFRTPLKVALFGGAGSGDQSSILQGSPALKQNMPQPNPSPS PTVQRQRNIRDESDDAALNKLKQKIAEMVETNPVMSQFKHQLLIDMTTEGLRIQIVDQ QNRPMFANASAEVQPYMRTILRELGTALNDVPNPISLSGHTDATQYATQHGYSNWELS ADRANASRRELVAGGMKPEKVSRVVGLEASVPLDKTNIYNPINRRISIVVLNARAAEA VRSGGVEPVADLRNDGKDTLTDAAARATGVADAVTAAKP" gene 758156..758569 /locus_tag="Rpic12D_4159" /db_xref="GeneID:8021847" CDS 758156..758569 /locus_tag="Rpic12D_4159" /inference="protein motif:PFAM:PF00072" /note="PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: rso:RSp1409 putative chemotaxis response regulator transcription regulator protein" /codon_start=1 /transl_table=11 /product="response regulator receiver protein" /protein_id="YP_002984079.1" /db_xref="GI:241665720" /db_xref="InterPro:IPR001789" /db_xref="GeneID:8021847" /translation="MSEKHILVVDDSTSIRRMIAACLRECGFAVTEAGDGSAALEAVR TSAQGSHHLVITDQVMPSMDGLTLIRALRALPAYADTPILMLTTEADNSIRDQARAAG ATGFLPKPFDPDGLTDSVMQLLEWHAQTHGSASTH" gene 758588..760762 /locus_tag="Rpic12D_4160" /db_xref="GeneID:8021848" CDS 758588..760762 /locus_tag="Rpic12D_4160" /inference="protein motif:PFAM:PF09078" /note="PFAM: CheY binding; CheW domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; ATP-binding region ATPase domain protein; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein; KEGG: rso:RSp1408 chemotaxis sensor histidine kinase transcription regulator protein" /codon_start=1 /transl_table=11 /product="CheA signal transduction histidine kinase" /protein_id="YP_002984080.1" /db_xref="GI:241665721" /db_xref="InterPro:IPR002545" /db_xref="InterPro:IPR003594" /db_xref="InterPro:IPR004105" /db_xref="InterPro:IPR004358" /db_xref="InterPro:IPR005467" /db_xref="InterPro:IPR008207" /db_xref="InterPro:IPR015162" /db_xref="GeneID:8021848" /translation="MNLDLSQFFGAFFEEAEELLVDMERLLLNLDVANPSSDDLNAIF RCAHSIKGGAATFGFTHMTELTHVAESILDRARTGTLQLRENMVDAFLETKDVLKSQL DAYRQEHPIDTATLEYMVAKLNSLTAEDGAPVAAAPAVAAPVAAAPEPVAAPQPAPVV VEAPAAEVVGDIEGGLDIKLINVSNEDCELIVTELKHLGTVLRHARTGRNSDIVLQST CTADDIIAVSCFIIDADQIVITPHVGGAAPAAEAAAPVVAAPTPAAAQTEVHAPAANE AAPAQAVAAAAVPVPVRPAAADQKPTVAAETSIRVGVEKVDQLINLVGELVITQAMLA QTAQAFDPVLNERLFAGLSQLTRNARDLQEAAMSIRMMPMDYVFNRFPRLVRDLAHKL GKQVELSTFGKSTELDKGLIERIIDPLTHLVRNSLDHGIELPEARVAAGKDATGQLLL SAAHQGGNIVIEVSDDGQGLNRDKILKKARERGLPVSDNMTDDEINQLIFAPGFSTAD QVTDVSGRGVGMDVVKQNIQSMGGYVEIQSQKGKGTTIRIVLPLTLAILDGMSVKTGD EVFILPLSCVAESLQPRPEDIKAVPGGGRLLKVRNEYLTLVPMYERFRITPSLPDPSE GIVVILDSEGKKIALQVDELVGQQQVVVKNLETNYRRVPGISGATILGDGSVALIVDV SALMRETRSGHSENAMRAVTAEKHELGEPQGGRFSTEAMAAA" gene 760843..761334 /locus_tag="Rpic12D_4161" /db_xref="GeneID:8021849" CDS 760843..761334 /locus_tag="Rpic12D_4161" /inference="protein motif:PFAM:PF01584" /note="PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: rso:RSp1407 chemotaxis protein CheW" /codon_start=1 /transl_table=11 /product="CheW protein" /protein_id="YP_002984081.1" /db_xref="GI:241665722" /db_xref="InterPro:IPR002545" /db_xref="GeneID:8021849" /translation="MEVKKHAIGDDTGGEEYLAFTLGREEYGIDILKVQEIRGYETVT RIANAPDFIKGVINLRGIIVPIVDLRIKFQLDRVEYNQYTVVIILNLMDRVVGIVVDG VSDVLTLQSQQIKPAPEFSGALDTEYIRGLGSIDERMLILVDIERLLLSADMALCDEA EAA" gene 761458..763305 /locus_tag="Rpic12D_4162" /db_xref="GeneID:8021850" CDS 761458..763305 /locus_tag="Rpic12D_4162" /inference="protein motif:PFAM:PF00015" /note="PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: rso:RSp1406 methyl-accepting chemotaxis I" /codon_start=1 /transl_table=11 /product="methyl-accepting chemotaxis sensory transducer" /protein_id="YP_002984082.1" /db_xref="GI:241665723" /db_xref="InterPro:IPR003660" /db_xref="InterPro:IPR004089" /db_xref="InterPro:IPR004090" /db_xref="GeneID:8021850" /translation="MFSKMTIRLRLGLMMAGIGVLAVIVGLTGLIGMRHANTRVQDGY AVQLAGTVALAESDSNLLSFRIVLDRAAMAPNAPGMEKTIERAQMFLDKSDAAWKRYR ALPTPADERKLADEAQGLRDVFLRDGAQVLMQAVQAHDEARINKTVMDVMPALYRPLG DKVAALNRLQMDVAKTSYEASQAEQRNLSALTTGLLLGGILVGGLLTWALRRSITLPL MRAIETAEHITQGDLTHTIQVDRADETGRLLRALQRMQDSLQKMVGQVRSGSDSIAST TQQIAAGNADLSQRTEQQASALEETASSMEELTSIVRQNADNARQASTLAGNASDIAV KGGEVVGRVVDTMAGINASSKKIADIIGVIEGIAFQTNILALNAAVEAARAGEQGRGF AVVAGEVRSLAQRSATAAKEIKELISDSVGRVENGTTLVAEAGSVIDEVVVAVKRVTD IMGEISSASDEQSAGIEQVNQAVTQMDEGTQQNAALVEQAAAAAMSLQEQASALRQAV EAFRTQAGAQANVVPAVSVAARVAAKPALKAKAVPSRAAKPKAAAGSNTAEPIAQTGA ATAAPASAKEQQRERTAAAAETKAAASAPKLPVPKLVAAGGDDSDWETF" sig_peptide 761458..761568 /locus_tag="Rpic12D_4162" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.994) with cleavage site probability 0.920 at residue 37" gene 763530..765434 /locus_tag="Rpic12D_4163" /db_xref="GeneID:8021851" CDS 763530..765434 /locus_tag="Rpic12D_4163" /inference="protein motif:PFAM:PF00015" /note="PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; KEGG: cti:RALTA_B0243 MCP: methyl-accepting chemotaxis protein, chemotaxis sensory transducer" /codon_start=1 /transl_table=11 /product="methyl-accepting chemotaxis sensory transducer" /protein_id="YP_002984083.1" /db_xref="GI:241665724" /db_xref="InterPro:IPR003660" /db_xref="InterPro:IPR004089" /db_xref="InterPro:IPR004090" /db_xref="GeneID:8021851" /translation="MGWIKRLPVSTVLTGGFLIVAAMGAAIGGLGIYTITQLTKASEE LAQKQMRAITQMGSAANSLAHASRAQTALLIATTLTERKTLSTQIADSMQHLKDGVEN VRPLFTSDEGKKMIREVDAIYPVWGKRMTDFVALMDKQGLDPTQFDSRVTAENVGLLD DTAAFEKTLDKMVKRVEEVSAASTVKARDDAHRSRLVMMVMACAGALLGIVLGLVIAR RLSRQLGGEPSYAAEIARRIAAGDLAVHVQTRPGDHGSMLFAMAQMQQQLTGTITNIK SSADSIASATKQIAAGNADLSQRTEEQASSLEETASSMEELTSIVKQNADNARQASQL AGSASDIAVKGGEVVGRVVETMAGINASSKKIADIIGVIEGIAFQTNILALNAAVEAA RAGEQGRGFAVVAGEVRSLAQRSATAAKEIKELIGDSVGRVRNGSALVAEAGTVIEEV VVAVRRVTDIMGEISAASDEQSSGIEQVNQAVNQMDEVTQQNAALVEQAAAAALSLEE QAQLLRNAVATFRTDASAELAVAAPIAVAAPAVPGEARPHKTEVVPSVARALASRKAA KPAVLPEAAPEQVAGPAAEQGEKAPHDAHAPIVPVAAAVVSAAASEAVVAPALKLTTG SADEDDWSTF" sig_peptide 763530..763604 /locus_tag="Rpic12D_4163" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.978) with cleavage site probability 0.731 at residue 25" gene 765538..766419 /locus_tag="Rpic12D_4164" /db_xref="GeneID:8021852" CDS 765538..766419 /locus_tag="Rpic12D_4164" /EC_number="2.1.1.80" /inference="protein motif:PRIAM:2.1.1.80" /note="KEGG: rso:RSp1405 chemotaxis protein methyltransferase; PFAM: MCP methyltransferase CheR-type; SMART: MCP methyltransferase CheR-type" /codon_start=1 /transl_table=11 /product="MCP methyltransferase, CheR-type" /protein_id="YP_002984084.1" /db_xref="GI:241665725" /db_xref="InterPro:IPR000780" /db_xref="GeneID:8021852" /translation="MAAQNLAPVSPTLASREFSFTAEDFGRIRDLIYRRVGISLSDRK SEMVYSRLARRLRVVNLGSFRDYLDALEKGHLPDEWEAFTNALTTNLTAFFREQHHFP ILHEHAKAKRTPFTVWCSASSTGEEPYSIAITLAEAFGSMSPSQVSVIASDVDTNALA RARAGIYPMERVAALSPERLKKYFLRGTGKHEGYARVRPELQAMIDFRQINLLDRDWP LQQKFDVIFCRNVMIYFDKPTQAKILEHFIDVMKPDGLLFAGHSESFLQVTKAWSLRG KTVYEIAPELRARMGAR" gene 766416..767126 /locus_tag="Rpic12D_4165" /db_xref="GeneID:8021853" CDS 766416..767126 /locus_tag="Rpic12D_4165" /inference="protein motif:PFAM:PF03975" /note="stimulates methylation of MCP proteins; PFAM: CheD family protein; KEGG: rso:RS02054 chemotaxis protein" /codon_start=1 /transl_table=11 /product="CheD" /protein_id="YP_002984085.1" /db_xref="GI:241665726" /db_xref="InterPro:IPR005659" /db_xref="GeneID:8021853" /translation="MIEFGKRATPQSAADAVRGDSGMASGMSAGAMATLAQSAASTHA YYDTTFSRRAMKVLPGEYSVTTEDLMLVTVLGSCVSACVRDKTLGIGGMNHFMLPSRN EGESILSPSMRYGTHAMEVLLNQLYKAGAKRERLEIKVFGGAAVLAGMSTLDVGERNG KFVLEFLRNEGLTVAAKDLFDVHPRKVYFVPSTGQIMVRKLRSQNSAAELDSEAQYAS KLSKSITTKPASRLQLFT" gene 767150..768277 /locus_tag="Rpic12D_4166" /db_xref="GeneID:8021854" CDS 767150..768277 /locus_tag="Rpic12D_4166" /EC_number="3.1.1.61" /inference="protein motif:PRIAM:3.1.1.61" /note="KEGG: rso:RSp1403 chemotaxis-specific methylesterase; PFAM: CheB methylesterase; response regulator receiver; SMART: response regulator receiver" /codon_start=1 /transl_table=11 /product="response regulator receiver modulated CheB methylesterase" /protein_id="YP_002984086.1" /db_xref="GI:241665727" /db_xref="InterPro:IPR000673" /db_xref="InterPro:IPR001789" /db_xref="GeneID:8021854" /translation="MNDKRKIQVLCIDDSALIRSILKEIINSQPDMEVVGVAPDPIIA RDLIKQTNPDVLTLDVEMPKMDGLDFLEKLMRLRPTPVVMISSLTERGSEATLRALEL GAVDFVAKPKLGMRDGMNEYADQIADKIRAAARAKLRPRTAAPVAAAGSATASTPGAH VRAEHAPATPALARTHFSSTEKLIIVGASTGGTEAIKDFLLEMPPDCPGILIVQHMPA GFTTSFAKRLDGLCRIRVKEAAHGERVLPGHAYIAPGDMHLSLGRSGANYVTELDQGP PVNRHRPAVDVLFRSAARNAGANALGVILTGMGKDGAVGMLEMRNAGAYNVAQDEASC VVYGMPKEAVAHGGVHEVLPLSQIGPHVLAKLSAHGRVTRV" gene 768427..768828 /locus_tag="Rpic12D_4167" /db_xref="GeneID:8021855" CDS 768427..768828 /locus_tag="Rpic12D_4167" /inference="protein motif:PFAM:PF00072" /note="PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: rso:RSp1402 chemotaxis response regulator transcription regulator protein" /codon_start=1 /transl_table=11 /product="response regulator receiver protein" /protein_id="YP_002984087.1" /db_xref="GI:241665728" /db_xref="InterPro:IPR001789" /db_xref="GeneID:8021855" /translation="MDKSQYRFLVVDDFPTMRRIVRNLLKELGFANVDEAEDGAAGLA KVKEGRFDFVISDWNMPNMDGLQMLQSIRADANTAISKLPVLMVTAEAKKENIIAAAQ AGANGYVVKPFTAATLDEKLGKIFEKLEKGA" gene 768828..769496 /locus_tag="Rpic12D_4168" /db_xref="GeneID:8021856" CDS 768828..769496 /locus_tag="Rpic12D_4168" /inference="protein motif:PFAM:PF04344" /note="PFAM: Chemotaxis phosphatase CheZ; KEGG: rso:RSp1401 chemotaxis regulator CheZ" /codon_start=1 /transl_table=11 /product="chemotaxis phosphatase, CheZ" /protein_id="YP_002984088.1" /db_xref="GI:241665729" /db_xref="InterPro:IPR007439" /db_xref="GeneID:8021856" /translation="MSEMHDGAQALAAEGVDHGDMPEMLQRIGHLTRMLRESMRELGL DKGVEKAASAIPDARDRLNYIANMTEQAATRVLNAIDAARPVQDALESDSQALVNRWQ SWMDRQLGDDEIRELVGQTNGFLRSVPEKTRDTNQQLMEILMAQDFQDLTGQVIKKVL DVVQLIESQLVGILLDNAPEHLRVEAAQVATSLLNGPQINPDHPDVVANQEQVDDLLE SLGF" gene complement(769572..770612) /locus_tag="Rpic12D_4169" /db_xref="GeneID:8021857" CDS complement(769572..770612) /locus_tag="Rpic12D_4169" /inference="protein motif:PFAM:PF02424" /note="PFAM: ApbE family lipoprotein; KEGG: rso:RSp1366 thiamine biosynthesis ApbE transmembrane protein" /codon_start=1 /transl_table=11 /product="ApbE family lipoprotein" /protein_id="YP_002984089.1" /db_xref="GI:241665730" /db_xref="InterPro:IPR003374" /db_xref="GeneID:8021857" /translation="MHPLPPSNLGRRRCLAGVPLLAVGMFVRPALADPTVERASTQLL GTQIDIIAQDARPGAAGAAMRAAFVEMARLECLMSRYRPDSQVSALARAAGRNPVPVA PEVMSVFKLARQVSEQSRGAFDITVGAYSGWNFDPEHSRIPSSSELARERRFVNYRDV VLDERHGSVYLRRPGMRLDLGGIAKLPILEAGMRVLRQHGIRDAMINGGGDVVASGKL QGHEWRVGLRDPLAPERLLGVVTLSDGVVASSGDYERYFMHNGQRFHHVLDPETGLPA HGPHGVTLVSRDVDDVNGLGAAIMAAGTATGQRMLAPMLARVDALIVGSGVRPWMSAG MATRLRQFSASS" sig_peptide complement(769572..769670) /locus_tag="Rpic12D_4169" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 1.000 at residue 33" gene complement(770617..771039) /locus_tag="Rpic12D_4170" /db_xref="GeneID:8021858" CDS complement(770617..771039) /locus_tag="Rpic12D_4170" /inference="protein motif:PFAM:PF00034" /note="PFAM: cytochrome c class I; KEGG: rso:RS02091 lipoprotein" /codon_start=1 /transl_table=11 /product="cytochrome c class I" /protein_id="YP_002984090.1" /db_xref="GI:241665731" /db_xref="InterPro:IPR002323" /db_xref="InterPro:IPR003088" /db_xref="InterPro:IPR009056" /db_xref="GeneID:8021858" /translation="MRTKTTLGLMLICGAVLAACGQKEPAAPAASTAAAPAPVQTSTP PAATTVAAAAEPENALGKRTFANVCSMCHAAGVAGAPKPGDKADWGPRIAQGKDTLYK HALEGFNGNKGAMPARGGSTLPDDAIKAAVDYMVAKSQ" sig_peptide complement(770617..770682) /locus_tag="Rpic12D_4170" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.507 at residue 22" gene 771278..773227 /locus_tag="Rpic12D_4171" /db_xref="GeneID:8021859" CDS 771278..773227 /locus_tag="Rpic12D_4171" /EC_number="1.7.99.6" /inference="protein motif:PRIAM:1.7.99.6" /note="PFAM: cytochrome c oxidase subunit II; KEGG: rso:RSp1368 nitrous-oxide reductase" /codon_start=1 /transl_table=11 /product="Nitrous-oxide reductase" /protein_id="YP_002984091.1" /db_xref="GI:241665732" /db_xref="InterPro:IPR002429" /db_xref="GeneID:8021859" /translation="MMTKHQQSPSTQQEEALSVPGRRRFMNSAALAGLATVVACTDKG TPAAAPAASASAPTATAAGEHVIAGLHPKPGELDTYYGLWSGGHTGDMRVMGMPSGRE IHRIPMFVPDALVGWGITNESKKVMGTKPDGSLRYTVGDTHHVHASYKDGNYDGRYAW INDKINSRLGRVRLDYFICDKITELPNVQGFHGIFPDKRDPLDPKINYTTRVFCGGEF AIPLPNTAGIDDPSKYRSLFTCVDAETMEVRWQVLIDGNCDLVATSYDGKLAATNQYN TEMGVHYEDMMSAERDACLFFNVARIEAAVKAGKFKTIGDSKVPVVDGTHAANQDPKT ALTAYVSVPKNPHGVNASPDQKYFVCAGKLSPTGTVIELSRVLDWFDGKLAKIDDAIV AEVELGLGPLHTAFDGRGNAYTTLFLDSQIVKWNIDAAIKFHNGDKNAKYVVDRLDVH YQPGHLSASQSETMAADGKFLAVGCKFSKDRFLPVGPLHPENEQFIDISGDKMVLLQD HPIRSEPHDFIIFKRELLHPKQVYSLDDFPLATKDPKQSGVVRNGKKVTVRLTSQAPA YSLREFKLKKGDEVTLILTNLDKVEDLTHGFAIPKYNINFIVNPQETASVTFIADKPG VFWCYCTHFCHALHLEMRSRMIVEA" gene 773246..775909 /locus_tag="Rpic12D_4172" /db_xref="GeneID:8021860" CDS 773246..775909 /locus_tag="Rpic12D_4172" /inference="protein motif:PFAM:PF04205" /note="PFAM: FMN-binding domain protein; KEGG: rso:RSp1369 transmembrane regulatory NosR transcription regulator protein" /codon_start=1 /transl_table=11 /product="nitrous oxide expression regulator, NosR" /protein_id="YP_002984092.1" /db_xref="GI:241665733" /db_xref="InterPro:IPR007329" /db_xref="InterPro:IPR017900" /db_xref="GeneID:8021860" /translation="MPRAGPRVPMNSKMPSRKQGFAAWVAVFLLMLLVGVQPAQAGRG AYEAELPANLAEAKDLCALVPCADVFPGAVRFSERMGQPPYVEAYGAAQGGKAALLGY VMLSTDITDIPAYSGKPVVTLIGMDRQGRYVGIKVLKHSEPILLLGIPESALLNFNKQ YIGKSVKDKIEVGQSRPDEGVLGVDAISGATVTVIAQNQVLATATSSVARQVGILAPT RHEPARYAQTGQRASWAELVKQGSVQRLLIRPEQLGLERAPEPFIELWFGDLNHPDLG ASLLGQSVWNDLHAQLKQNEHAIFVIRTAGAASFKGSGFVRGGIYDRIQIKQGAESFT FRDSDYLNLYGLAAPGAPAYTESAIFVVRSPAFSAAYPWKLSFLGNRVDRATGTRSFV TFDAPYWLPETLLQGGHPHIDEPEAPWRRVWRTRAPQIALFIVLLVSVSVVYALRERL TRRSTHKNKWPVNAFKYTAWALSIGFVGFGAMAQPSITQVLTWFHSLLFQWTWSLFLT DPFIFCFWIFIILTVFLFGRGLFCGWLCPFGSLSEALYKIGGRLGLKRWQRHLPRAWH DKLKWLKYAIFFGLLTVSVFSMGLAEKLAEVEPFKTTFLVGISHRAWPYGLFVCTLLG ISLFVERPYCKYICPLGAALAMPSTFRWFGLRRKQDCNSCKACAVGCGSLAIDADGRI DHRECLHCLDCMVLYTDVKGCPPLAKERKRRERDGLEITPIGKDGYFIPIQPVPVPMN PRVAQGPDPRMPTDRVVPTGREGARGLRWLMLELRDHLWPWSSNGWRSARGLQIAGAS LALAASVAWILAATGHLSSGAVIAWWFGWSLYEVLIRLAGRRYVKDGPWWQANYRRAT VMDMLSYVGFKNLLIGAMLFLTLKALGWLQV" sig_peptide 773246..773371 /locus_tag="Rpic12D_4172" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.989) with cleavage site probability 0.985 at residue 42" gene 775906..777201 /locus_tag="Rpic12D_4173" /db_xref="GeneID:8021861" CDS 775906..777201 /locus_tag="Rpic12D_4173" /inference="protein motif:PFAM:PF05048" /note="PFAM: periplasmic copper-binding; SMART: Carbohydrate-binding and sugar hydrolysis; Parallel beta-helix repeat; KEGG: rso:RSp1370 copper-binding periplasmic NosD signal peptide protein" /codon_start=1 /transl_table=11 /product="periplasmic copper-binding" /protein_id="YP_002984093.1" /db_xref="GI:241665734" /db_xref="InterPro:IPR006626" /db_xref="InterPro:IPR006633" /db_xref="InterPro:IPR007742" /db_xref="GeneID:8021861" /translation="MRWLPVLLVVCGWLAAVQGAHASAATTVRVAAGQSLQAAIDAAH PGDVLEIERGTYTGNLIVNKPLTLRGLDRPTLSGGQRGDTIRIGAPDVVIEGLIVRDS GDSLKEQNAGINILPGAHRAVVRQCELTYNLFGLWIEKANDVRIEANTITGKRDYNSA QRGNGVELYNTQGARIIGNNISFVRDALYVDVSHHAVFKGNRLHHSRYGTHYMNSYYN LWEDNDSYANRGGLALMEVRDQIVRNNRTWGNADHGIMLRTLQDSVVENNVVADNDRG FFIYDVEYTQLRGNLIVGNQVGVHLSAGSTRNVVQGNDFIGNREQVRYVGARDEAWGA RTAAERAQGNFWSDYLGWDRDGDGIGDVPYEANDVVDRLIWRHPGVQLLLASPAVQAL RFVSRQFPILRVPSVVDAYPRMQPANPHWSTWRDRSPSR" sig_peptide 775906..775974 /locus_tag="Rpic12D_4173" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.748 at residue 23" gene 777179..778135 /locus_tag="Rpic12D_4174" /db_xref="GeneID:8021862" CDS 777179..778135 /locus_tag="Rpic12D_4174" /inference="protein motif:PFAM:PF00005" /note="PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rme:Rmet_4914 ABC transporter related" /codon_start=1 /transl_table=11 /product="ABC transporter related" /protein_id="YP_002984094.1" /db_xref="GI:241665735" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR017871" /db_xref="GeneID:8021862" /translation="MTDPLHVDETAAISLRGVCKHYGAVRAVDGVDLDVGYGELFGLI GHNGAGKSTLFKMMLGLIPATAGSIRVAGASVRGAAFRAARRQIGYLPENLVLYDNLS GLETLRFFAKLKGAPAADCASLLARVGLAGAVDQPVRAYSKGMRQRLGFAQALLGAPR VLFLDEPTNGLDPAAIHDFYATLQALREQGVTILITSHILAELQQRIDRLAILADGRV LALGSVAALRAQADLPLTLALRVEAGARGALWAQLAPLRAHGAEIVDGQAEHEVMLRC SRSLKMDVLQALQPLGGRLLDLQIHEPSLEDVFFGLRQTEAA" gene 778132..778956 /locus_tag="Rpic12D_4175" /db_xref="GeneID:8021863" CDS 778132..778956 /locus_tag="Rpic12D_4175" /inference="similar to AA sequence:KEGG:RSp1372" /note="KEGG: rso:RSp1372 NosY transmembrane protein" /codon_start=1 /transl_table=11 /product="NosY transmembrane protein" /protein_id="YP_002984095.1" /db_xref="GI:241665736" /db_xref="GeneID:8021863" /translation="MIGIEYRQVAAVAAKELRDRLRNRWVLAVAVVFAVFSLVISYFG GAEQGTLGPRSIEFVITSLVSLVIYLIPLIALLLGFDAVVGERERGSLDLLLALPLTR VELLLGKYLGLAAALTLSTLGGFALMAVLLWHQFGSAGLYQAAGFVLSSVLLGLVFLS LALFVSVVSRERTRASGAAIALWFGFVLIFDLLLLGLLVATGGSFGGQALAYLLLLNP TDIFRILNVFSLDQLRGLHGLVSIVPPALGNPWAMGAAMLAWIAAPLALAAWRFRA" gene 778953..779483 /locus_tag="Rpic12D_4176" /db_xref="GeneID:8021864" CDS 778953..779483 /locus_tag="Rpic12D_4176" /inference="protein motif:PFAM:PF05573" /note="PFAM: NosL family protein; KEGG: rme:Rmet_4912 NosL" /codon_start=1 /transl_table=11 /product="NosL family protein" /protein_id="YP_002984096.1" /db_xref="GI:241665737" /db_xref="InterPro:IPR006311" /db_xref="InterPro:IPR008719" /db_xref="GeneID:8021864" /translation="MNPDRRRLLAAALAGSAALIGLAACGRQAEATLVPAEADAATTC DLDGMLVADYPGPKAQLYYQGDATPHWCCDTVEMFNTLLKPEQARPIRAALVQDMGQA DWEHPRGHWFDAKTGYYVFGSRRRGSMGPTVASFRLEADARAFIARDGGKLLRYAEVT PDMVDLSGGALHDGRM" sig_peptide 778953..779042 /locus_tag="Rpic12D_4176" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.717 at residue 30" gene 779486..780088 /locus_tag="Rpic12D_4177" /db_xref="GeneID:8021865" CDS 779486..780088 /locus_tag="Rpic12D_4177" /inference="similar to AA sequence:KEGG:Rmet_4911" /note="KEGG: rme:Rmet_4911 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002984097.1" /db_xref="GI:241665738" /db_xref="GeneID:8021865" /translation="MRLRRSGLMTVALLAASLWWYGVYASRRVEPEIPTEICFVAAPT PYDPRSGTAPDAPRAIPLNARCPVCGAFPSRAPDWAAQVIFADGDAYFFDSPLSLFIY LRNLPRYAAGRKSADIAAAYVRAVGDGRWIAALQAVYVWGSDVPGPMRRGNLPAFRNH TDARDFITRHGGSVTGSAGITAERLRALEPSQPHPAGRHT" sig_peptide 779486..779563 /locus_tag="Rpic12D_4177" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.839) with cleavage site probability 0.668 at residue 26" gene 780282..781445 /locus_tag="Rpic12D_4178" /db_xref="GeneID:8021866" CDS 780282..781445 /locus_tag="Rpic12D_4178" /inference="protein motif:TFAM:TIGR00328" /note="TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter; KEGG: rso:RSp1394 flagellar biosynthetic FlhB transmembrane protein" /codon_start=1 /transl_table=11 /product="flagellar biosynthetic protein FlhB" /protein_id="YP_002984098.1" /db_xref="GI:241665739" /db_xref="InterPro:IPR006135" /db_xref="InterPro:IPR006136" /db_xref="GeneID:8021866" /translation="MSEESDLEKTEPASPRRLEQAREEGDVPRSRELASFALTAVSAG GLWVMGDSIVRAASSFLARCLEFHRYNYTSGQDQWNYVTGQFMPLAMTLGGLMLMLVI AALSPLALTRGAISFKPLSPDISRLFKLQGLTRMFSLEGLMELPRLLIKLFLIAGVGW LLVRYYRGDLIELPQQDLGVAMRDTLHVAGVAFLCMAAVMMLVAAVDVPLSLWQYARK HRMTKEEVRKEHRESEGDPHVKGRIRNLQRQAAQRRMMADVPKADVIVTNPTHYAVAL RYSEKEGGAPRVLAKGADMVAAKIRELGTEHKIPILEAPPLARALYRHTEIGHQIPEA LYAAVAEVLAYVYQLRRLHQVGGRVPVRPTDLPVPAELDPGPQPGPDDEPEDA" gene 781739..783865 /locus_tag="Rpic12D_4179" /db_xref="GeneID:8021867" CDS 781739..783865 /locus_tag="Rpic12D_4179" /inference="protein motif:TFAM:TIGR01398" /note="TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein; KEGG: rso:RSp1393 flagellar biosynthesis FlhA transmembrane protein" /codon_start=1 /transl_table=11 /product="flagellar biosynthesis protein FlhA" /protein_id="YP_002984099.1" /db_xref="GI:241665740" /db_xref="InterPro:IPR001712" /db_xref="InterPro:IPR006301" /db_xref="GeneID:8021867" /translation="MNAALLRVTDILRKGDYRSAAGPVLIILILAMMVLPLPPFILDL LFTFNIALSIIVLLISMHTLKPLDFSSFPSILLITTLMRLSLNVASTRVVLMEGHTGP DAAGKVIEAFGHFLVGGNYTVGIVLFVILVIINFMVISKGAGRIAEVSARFTLDAMPG KQMAIDADLNAGLIREDEARRRRTEIAQEAEFFGSMDGASKFVRGDSVAGIAILLINI VGGLAVGVLQHGMDVGHAATNYTLLTIGDGLVAQIPALVISTAAGIMVSRVSTDKDVG QQLSSELFAMPTVLMTTAGVLGLLGLVPGMPHFPFILFGGGLGYLGWYLKKKREVPEI EPVLQAIAPVDTPEASWDDVSWVDVLGLEIGYRLIPLVDKSQDGELLRRIKGIRKKFT QDMGFLAPVVHIRDNLELGPSSYRITLKGVEIGHGEVQQGKFLAINPGGQDGMGGHGG MGGLGGRLGTQLPGTPTVDPTFGLPAMWITADVRDRAQAEGYTVVDCSTVIATHVNQL IYTHSTELLGRLEVQQLLDHLGKEAPKLVEDVVPKLLPVATVQKVLQNLLDEGLHIRD IRTIVETLAEHGGRTQDPAELTAAVRVALGRAIAQQLFPNKTEMQVVTLDPNLENILL QSVVGSNAGPIEPQLADSLMQAAADSSRQHEQMGQTGVLLVPPALRPMLARLFKRAAP SLRVLSHAEIPDHRTIKVVAMLGGRA" gene 783862..785760 /gene="flhF" /locus_tag="Rpic12D_4180" /db_xref="GeneID:8021868" CDS 783862..785760 /gene="flhF" /locus_tag="Rpic12D_4180" /inference="protein motif:PFAM:PF00448" /note="PFAM: GTP-binding signal recognition particle SRP54 G- domain; SMART: AAA ATPase; KEGG: rso:RSp1392 flagellar biosynthesis regulator FlhF" /codon_start=1 /transl_table=11 /product="GTP-binding signal recognition particle SRP54 G- domain protein" /protein_id="YP_002984100.1" /db_xref="GI:241665741" /db_xref="InterPro:IPR000897" /db_xref="InterPro:IPR003593" /db_xref="GeneID:8021868" /translation="MKMHRFTGLTSRDVLRKVRDQLGDGALILSNRAIPGGIEIIAAS DSHVDALVDTQSSAPKTAQRRPMAPAPIPEPAPIAAATAAVAAAHAPAEEAAQAEAPA PNALARLRNRFIASRRAPAQEDAPAAPAAPVAKPAGRTLQTRVDDDVAFGEEDALAAS TRMLAGLSLDRANAEVAQSAAQALASTAQFIARRSTVEDDQPEMESTARFAARREQAR EQDDRPVTLRSFTERVEAQARTLRAEQQKTEAPMKARIEAQAEAGTSSDIFVRVEDTM VKPEAPRDDVSLQRSAFQADVKESIRAETDVMTRRMVGEIETLKSTLNDAMSSLASLG VKLGDPVRTRLFQTMLNAGFSAQLTRYVLENMPQHDAYEGALDFVQRAIEKNLSTVSD ENSLLDQGGVFALMGPTGVGKTTTTAKLAARFVLRHGASRVALLSTDSYRIGGHEQLR IYGKILGVSVHAVKDAQDLSLALNDLREKHVVLIDTIGMSQRDRAVSEQMAMLHAVGP SIKRLLLLNAASNGKTLDEVVGAYRDANLAGCILTKIDEAASVGHAMDVMIRRRLPLH YVSYGQRVPEDIAVPNKKLLIHRSFRAGAEQSSFSLDSDESLLVAQGAVLRNAGNREP GLAAFDFA" gene 785776..786567 /locus_tag="Rpic12D_4181" /db_xref="GeneID:8021869" CDS 785776..786567 /locus_tag="Rpic12D_4181" /inference="similar to AA sequence:KEGG:RS02067" /note="KEGG: rso:RS02067 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002984101.1" /db_xref="GI:241665742" /db_xref="GeneID:8021869" /translation="MTTPFAKDQAAGLRRMLGHAAARRVLVIGAEEQVDDFVDNLRIA LSAMGRDTAVVNAQTMLAMPGVLEQYDETADVTLVAAHFGTRALSTVAEACDDVLLTF SDGPEGLKSAYTLLKKTAVLQGSAGIRTVVCGAHSVDSAVRVFGNLANTVGQYLNTRI DFAGYLPEDRHVELALSLGKPVASAFPASPSAMAFRQLAEEMLSWASAEAQAGDGSVP SRVVMSARAPAQPADESAQATSMSASTATATATPGATARAAELVY" gene 786576..787337 /gene="fliA" /locus_tag="Rpic12D_4182" /db_xref="GeneID:8021870" CDS 786576..787337 /gene="fliA" /locus_tag="Rpic12D_4182" /EC_number="4.1.1.65" /inference="protein motif:TFAM:TIGR02479" /note="KEGG: rso:RSp1390 flagellar biosynthesis sigma factor; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; Sigma-70 region 4 type 2" /codon_start=1 /transl_table=11 /product="RNA polymerase, sigma 28 subunit, FliA/WhiG" /protein_id="YP_002984102.1" /db_xref="GI:241665743" /db_xref="InterPro:IPR000943" /db_xref="InterPro:IPR007624" /db_xref="InterPro:IPR007627" /db_xref="InterPro:IPR007630" /db_xref="InterPro:IPR012845" /db_xref="InterPro:IPR013249" /db_xref="InterPro:IPR014284" /db_xref="GeneID:8021870" /translation="MNEASKAGMDMYTATGRKTKSDEMATYAPLVRRIANQMMVKLPA SVELDDLIQAGMMGLLDALSRYEETQGVQFEFYAAQRIRGAILDELRGSDWLPRGLRR NARTIEQAIQKLQQQKGRAPTETEIAVALGMSLAEYQKQLVDLQGSQLLYYEDFDRED ADAFIENRAPENDATPLDQLLDHDLRESVVAAIEGLPEREKLMMSLYYEQDLNLREIG AVMGVSESRVCQIHSQAIARIRSRLRDRAWLPTPT" gene 787716..789143 /locus_tag="Rpic12D_4183" /db_xref="GeneID:8021871" CDS 787716..789143 /locus_tag="Rpic12D_4183" /inference="protein motif:TFAM:TIGR03173" /note="TIGRFAM: xanthine permease; uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: rso:RSc2118 putative xanthine permease transmembrane protein" /codon_start=1 /transl_table=11 /product="xanthine permease" /protein_id="YP_002984103.1" /db_xref="GI:241665744" /db_xref="InterPro:IPR001753" /db_xref="InterPro:IPR006042" /db_xref="InterPro:IPR006043" /db_xref="InterPro:IPR017588" /db_xref="GeneID:8021871" /translation="MRQSPGQPTPSSSTIADTVADPVNEFLPLPRLFALGLQHLLVMY AGAIAVPLIVGNALGLSKSDLSYLVNCDLFAAGIGTLIQSLGFLIFGIRLPVMMGVTF AAVAPMIAIGVEPGMGLPGIFGASIVSGVFGIAVAPLMGRLLGLFPRVVTGTVIMLIG FSLLSVGINWAAGGQQMIPQVVDGVRHMVPNPAFGDPFGLAIAALVLVTILLLTKFGN ALLCNIAVLLGIVTGTLVAAAFGKVSMADASAAPLMTLVTPFYFGMPKFELSAIISMC IVIVITLVESTGMFLALAHVVGKPISRNELTNGLRADGLATVVAGVFNTFPHTSFSQN IGLVSITGVRSRYVAAAGGVLLIVLGLFPKLSYVVASVPQYVLGGAGIVMFGMVAAAG IRMLGMVDFQQQRHNLLIIAVSVGFGMMPTLAPAFFHHFPDWTRPITHSGIVMGTLVA VVLNAWFNGIRGSHEVIHGEAAAAH" gene complement(789172..790254) /locus_tag="Rpic12D_4184" /db_xref="GeneID:8021872" CDS complement(789172..790254) /locus_tag="Rpic12D_4184" /EC_number="5.1.3.3" /inference="protein motif:PRIAM:5.1.3.3" /note="PFAM: Aldose 1-epimerase; KEGG: bxe:Bxe_B2624 aldose 1-epimerase" /codon_start=1 /transl_table=11 /product="Aldose 1-epimerase" /protein_id="YP_002984104.1" /db_xref="GI:241665745" /db_xref="InterPro:IPR008183" /db_xref="GeneID:8021872" /translation="MSIAPALSAHAPLDGAISSATWGHLPDGEPVRLFTLRNASDMRV SISDLGATLVSWQAPDRGGRLGEILLNHATPAAYLQSGGYLGGLIGRWANRIAGARFT LDGIDYALDRNEDSNLLHGGASGFHRALWDAEEQDGALVLRLMSAEGDAGFPGNVAVQ VRYALDDDGTLSIDYEARTDAPTPINLTSHGYFNLSGKPGTDIRGHILSIDADAYLEV DAKLIPTRAVSVAGTAFDFRQAAPIGVRLDWPNAQLAQAGGFDHCFMLRNTVPDDHPH VRPVARLYEPGSGRELTVLTDQRGLQFYSGHMLSGTHAQRSGLCLEASAFPNQVNMPD AEAVMLRPGQVYRQRTAYRVSVARET" gene complement(790251..791474) /locus_tag="Rpic12D_4185" /db_xref="GeneID:8021873" CDS complement(790251..791474) /locus_tag="Rpic12D_4185" /inference="protein motif:PFAM:PF00165" /note="PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_B2623 AraC family transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, AraC family" /protein_id="YP_002984105.1" /db_xref="GI:241665746" /db_xref="InterPro:IPR000005" /db_xref="GeneID:8021873" /translation="MHRQLPDPSQHARIHRIALLFNANKVYDREIIAGIGDYMRSTRV TWDLFLEEDFRCRLPGIERFDGDGIIADFDDPAVAEALRDCPLPVVAVGSSYEDAAHY PANVPYVATDNSKLVALAYRHLIEAGLQHFALYSLPQAPENRWAQQRELAFTRLRRQD NPAAPVEQEIYRGLSTSAPTWHQAISQLIEWLRGLPRPIGIIAVTDARARHLLQACMT AGFAVPEEIAIIGIDNDPLTRTLSRIPLSSVIQGTVEMGRTAAHLLHQMLGGARLAGR QILVPPVGINVLASSRHQPLASPYVMRARHFIRQYACQGIKTEQVADYVGISRSSLEE HFRRELHCTVHQEILRHKLDAAKHMLASRDVATAEVAVRCGFTSPQYMHAVFRRELDC TPREYQERAIAEGQS" gene 791744..792772 /locus_tag="Rpic12D_4186" /db_xref="GeneID:8021874" CDS 791744..792772 /locus_tag="Rpic12D_4186" /EC_number="3.6.3.17" /inference="protein motif:TFAM:TIGR02634" /note="KEGG: bxe:Bxe_B2621 ABC xylose transporter, periplasmic ligand binding protein; TIGRFAM: D-xylose ABC transporter, periplasmic substrate-binding protein; PFAM: periplasmic binding protein/LacI transcriptional regulator" /codon_start=1 /transl_table=11 /product="D-xylose ABC transporter, periplasmic substrate-binding protein" /protein_id="YP_002984106.1" /db_xref="GI:241665747" /db_xref="InterPro:IPR001761" /db_xref="InterPro:IPR013456" /db_xref="GeneID:8021874" /translation="MKSNQRRCVLRAAFCGAVLASLSMGAPLAHASKAHPEIGFCIDD LRVERWSRDRDYFVAAAEKLGAKVSVQSADASEQRQISQIENLISRGVDVIVIVPFNS KALTNVVAEAKKAGIKVVSYDRLILDADVDAYISFDNEKVGELQAQGVFNVRPKGNYF LLGGAPTDNNAKMLRQGQLKVLQPAIDRGDIKVVGSQWVPEWSASAALGIVENALTAN NNKIDAVVASNDGTAGGAIQALAAQKLAGKVPVSGQDADLAAVKRVIAGTQTMTVYKP LKLIATEAAQLSVALAKGDKLKYNAQYDNGKKKVDTVLLQPTQLTKDNVNLVVKDGFY TQAQISGQ" sig_peptide 791744..791839 /locus_tag="Rpic12D_4186" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.816 at residue 32" gene 792854..794407 /locus_tag="Rpic12D_4187" /db_xref="GeneID:8021875" CDS 792854..794407 /locus_tag="Rpic12D_4187" /inference="protein motif:TFAM:TIGR02633" /note="KEGG: bxe:Bxe_B2620 xylose transporter ATP-binding subunit; TIGRFAM: D-xylose ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase" /codon_start=1 /transl_table=11 /product="D-xylose ABC transporter, ATPase subunit" /protein_id="YP_002984107.1" /db_xref="GI:241665748" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR013455" /db_xref="GeneID:8021875" /translation="MSEPLLQMRGIVKTFDGVKALDGINLVVRPSECVGLCGENGAGK STLMKVLSGVYPSGTWDGEILWEGQPLRAGGICDTERAGIVIIHQELMLVPELSVAEN IYLGNEITLPGGRMNYAAMYQGADKLLRDLNIQGINVALPVMHYGGGHQQLIEIAKAL NKRAKLLILDEPSSSLTAAETRILLDIVRDLKARGIACVYISHKLDEVEAVCDTVTVI RDGRHVSTAPMRDLTTDRIVAQMVGREITQLFPREPHPIGEVVFEARNVTCYDANNPT RKRVDDVSFAVRRGEILGVAGLVGAGRTELMQAVFGAYEGASEVELVLDGKPLKIRAP LDAIRAGIAMVPEDRKRHGIVSLMSVGHNITLAVLQRFARLGRIDGAAELDTIRKEMR RLAVRAAHPMLPIASLSGGNQQKAVLTRMLLTEPRVLILDEPTRGVDVGAKYEIYKLI GDLAKRGMAIIVISSELPEVLGISDRVLVIGEGELRGDFVNDGLTQEHILTAAIQPVR HTSTFHRGG" gene 794410..795612 /locus_tag="Rpic12D_4188" /db_xref="GeneID:8021876" CDS 794410..795612 /locus_tag="Rpic12D_4188" /EC_number="3.6.3.17" /inference="protein motif:PRIAM:3.6.3.17" /note="PFAM: inner-membrane translocator; KEGG: bmj:BMULJ_04294 simple sugar transport system permease protein" /codon_start=1 /transl_table=11 /product="Monosaccharide-transporting ATPase" /protein_id="YP_002984108.1" /db_xref="GI:241665749" /db_xref="InterPro:IPR001851" /db_xref="GeneID:8021876" /translation="MTSQTSPQAAGGVDHSRSTIKATQRLRQLFARYKILALLIAVAA IWLFFSMLTDGAFTSPRNLSNLLRQMSITGMLACGMVFVIIAGEIDLSVGSLLGLLGG VAAILDQGLGWPITATVPVVLLLGVAMGLFNGWWSTYRGVPSFIVGLGGMLAYRGILL GLTHGSTIAPVSDSFVLIGQGYLPRHVGDLMAVLIFCLLIFVVARQRREHRRYELDVA PLWQDVAKLVVAGAVIVAFVATLNSYGGIPVPVLLVLALLGIFSWIASQTVFGRRIYS VGSNLEATRLSGINTDRVKLAIFGLMGLMCAFAGIVNTARLAAGSPSAGTMGELDAIA ACFIGGTSMRGGAGTVYGALVGALVMASLDNGMSMLDVDAYWQMIVKGSILVLAVWVD VISRSGRR" gene 795659..796426 /locus_tag="Rpic12D_4189" /db_xref="GeneID:8021877" CDS 795659..796426 /locus_tag="Rpic12D_4189" /inference="protein motif:PFAM:PF00106" /note="PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_C1363 D-xylose dehydrogenase" /codon_start=1 /transl_table=11 /product="short-chain dehydrogenase/reductase SDR" /protein_id="YP_002984109.1" /db_xref="GI:241665750" /db_xref="InterPro:IPR002198" /db_xref="InterPro:IPR002347" /db_xref="InterPro:IPR002424" /db_xref="GeneID:8021877" /translation="MSYAIYPSLVNKNVVITGGGSGIGAAIVEGFAKQGARVTFLDIA RADSEALASSLGECVHPPVFRYCDLRDIDTLNATFSDIEADTGPIDVLINNAANDDRH QIGTVTQAYWDNRIEVNLRHQFFCAQAVLPSMKKRGHGVILNLGSISWHLAQADLAIY MTAKAGIEGLTRGLARDLGGFGIRVNCIVPGAVRTPRQMALWQSPESEAKLLGEQCLH ERVDPEHVARMALFLASDDAARCTAREYFVDAGWYGG" gene 796423..797328 /locus_tag="Rpic12D_4190" /db_xref="GeneID:8021878" CDS 796423..797328 /locus_tag="Rpic12D_4190" /inference="protein motif:PFAM:PF08450" /note="PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: bxe:Bxe_C1362 Xylono-1,4-lactonase" /codon_start=1 /transl_table=11 /product="SMP-30/Gluconolaconase/LRE domain protein" /protein_id="YP_002984110.1" /db_xref="GI:241665751" /db_xref="InterPro:IPR005511" /db_xref="InterPro:IPR013658" /db_xref="GeneID:8021878" /translation="MMAPIIPDCVWRVGATLGEGAVWHAASRCVVFVDIQGRRLYRYD PDTDVRRSWVAPGQIGFALPSVDGSWICGVPGGLYRFSFETGTFSRVLPVETDRPGNR LNDGYVDRTGALWFGSMDDAEREPSGQLYRVGGDGGLSVRDSGYVITNGPTASPDGRT LYHTDTLQRVIYAFDLGDDGSLERKRIFTSIEGSGYPDGMAVDEEGCLWVALFGGGRI ERFSPDGRCIGRVDFPCSNITKLAFGGDDLQTVYATTARKGLTDEALQKEPLAGGLFA FRAPVRGLPSTDCAVDFSAAATGQP" gene complement(797319..798503) /locus_tag="Rpic12D_4191" /db_xref="GeneID:8021879" CDS complement(797319..798503) /locus_tag="Rpic12D_4191" /inference="protein motif:PFAM:PF01557" /note="PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bpy:Bphyt_5802 hypothetical protein" /codon_start=1 /transl_table=11 /product="fumarylacetoacetate (FAA) hydrolase" /protein_id="YP_002984111.1" /db_xref="GI:241665752" /db_xref="InterPro:IPR002529" /db_xref="GeneID:8021879" /translation="MTAIANHLPHDLEHATLVGRVWRTTEKSKGPSVVVVRNGVVFDI TEAVPTVADLFEHPDALAVARQAQGENLGRVETLVERSLAADRAGNAPTLLAPNDLQP IKACGVTFAVSLIERVIEEQAGGDPAKARDVRASIAGVVGSDLSKIKPGSDAAMRLKD ELQRRGAWSQYMEVGIGPDAEVFSKSQPMSAVGFGADVGLHPASRWNNPEPEIVLAVS STGHVVGAALGNDVNLRDIEGRSALLLGKCKDNNGSCAIGPFVRLFDERFTLDTIRAT QVSLRVDGADDGFVLDGVSHMSEISRDPLDLVAQTCGPHHQYPDGFMLFLGTMFSPIK DRDAPGAGFTHHLGDRVTISAPPLGALVNTVRLSTEIAPWTFGVRALYRNLAARGLVR QG" gene 798643..799398 /locus_tag="Rpic12D_4192" /db_xref="GeneID:8021880" CDS 798643..799398 /locus_tag="Rpic12D_4192" /inference="protein motif:PFAM:PF01614" /note="PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: bpt:Bpet4676 IclR family transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, IclR family" /protein_id="YP_002984112.1" /db_xref="GI:241665753" /db_xref="InterPro:IPR005471" /db_xref="InterPro:IPR014757" /db_xref="GeneID:8021880" /translation="MKTDYEVPALKRIHDVLEILCAATSPVRPAALAQATGMSRSTLY LLLESLEKRRWIEKQADGYLIGLTLFELGNAYFRHDSLLAAFRRESAAFVAAHNEVVQ LAVLDGTEVVYIAREDAPRPVRLVSDVGLRLPAHCCALGKALLASLDDEAVRALLPAR LAAMTERTTTRRADLLDELERIRVRGLATEREEVVAGLACFAAFVGITPLGKRVAVSS SVPVSRLDARREKRLVVGVAGMADRIGRALAQA" gene 799488..800504 /locus_tag="Rpic12D_4193" /db_xref="GeneID:8021881" CDS 799488..800504 /locus_tag="Rpic12D_4193" /inference="protein motif:PFAM:PF00532" /note="PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: bcm:Bcenmc03_6297 LacI family transcription regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LacI family" /protein_id="YP_002984113.1" /db_xref="GI:241665754" /db_xref="InterPro:IPR000843" /db_xref="InterPro:IPR001761" /db_xref="GeneID:8021881" /translation="MTTGTTPPRMADVARVAGVSKMTVSRVLAGGSVSPETRARVQEA IDALGYVATAAAGMLSSGRSEFVAALVPSLASSNFADTVRGLSDALAPHGLQLLLGDT DYHLDQEEALVRSLLRHQPRGIALTGRHHSPGTRALLERAGIPIVEMWDLPERPIDRA VGFSNAKASLAMLHHLHQRGYRRIGFLCGASELDRRGTDRMRGYMSGIKSLGLGEPRV IRLGESPITMSHGGPAMAALLDAWPDTDAVMCVSDMSAFGAIMECHRRGLSVPGDIAV GGFGNFEVAWCCHPTITTISVDAYGIGLRTGEVLLDALGVGEATSTRKLSRIDFSVVE RESA" gene complement(800526..802310) /locus_tag="Rpic12D_4194" /db_xref="GeneID:8021882" CDS complement(800526..802310) /locus_tag="Rpic12D_4194" /EC_number="4.2.1.9" /inference="protein motif:PRIAM:4.2.1.9" /note="PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; KEGG: bcm:Bcenmc03_6298 dihydroxy-acid dehydratase" /codon_start=1 /transl_table=11 /product="Dihydroxy-acid dehydratase" /protein_id="YP_002984114.1" /db_xref="GI:241665755" /db_xref="InterPro:IPR000581" /db_xref="GeneID:8021882" /translation="MPAQPPRRLRSQLWFDDPSHADMTALYVERFMNYGLTREELQSG RPIIGIAQTGNDLAPCNRHHLELAQRVKAGIRDAGGIPMEFPVHPLAEQSRRPTAALD RNLAYLGLVEILHGFPLDGVVLTTGCDKTTPACLMAAATVDLPAIVLSGGPMLDGWHE GKRVGSGTVIWHARNRLAAGDIDYEGFMELTTASSPSIGHCNTMGTALSMNSLAEALG MSLPGCASIPAAYRERGQMAYATGKRIVDLVREDIRPSTIMTRAAFENAIMVASALGA STNCPPHLIAIARHMGVELSLEDWQRHGESVPLLVNCMPAGEYLGESFHRSGGVPAVL RQLDAGGLLRRDCPTVSGRTIGAIADAAPAADREVIFPVDAPLKHRAGFIVLSGNFFD SAIMKMSVVGEAFRQTYLSEPGAENVFETRAIVFDGPEDYHARINDPALAIDERCILV IRGCGTVGYPGSAEVVNMAPPAALVKQGIESLPCMGDGRQSGTSASPSILNMSPEAAA GGGLALLRTGDRIRVDLNARRVDVLVDAEELERRRESATFSVPQSQTPWQEIYRKCVG QLSTGGCLEPATLYLNVIETRGNPRHSH" gene 802614..803153 /locus_tag="Rpic12D_4195" /db_xref="GeneID:8021883" CDS 802614..803153 /locus_tag="Rpic12D_4195" /inference="similar to AA sequence:KEGG:Smlt4328" /note="KEGG: sml:Smlt4328 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002984115.1" /db_xref="GI:241665756" /db_xref="GeneID:8021883" /translation="MQVLSARFEKTDAGRREIAMRSGALSRSSRALLIMVDGQATGED LVVRAGQLGLEAQAVVELVQAGFIQSATDVAGEPVFVQVAEPQPEAPKPAAPAAPARK RSLAAARMYLMDIAARTFSSAEHPIRQRLVEATDRASVESAFDALLAALREATSASMV EQVEVSFRGFLPAEDGVAG" gene complement(803158..803817) /locus_tag="Rpic12D_4196" /db_xref="GeneID:8021884" CDS complement(803158..803817) /locus_tag="Rpic12D_4196" /inference="protein motif:PFAM:PF00857" /note="PFAM: isochorismatase hydrolase; KEGG: bpy:Bphyt_3260 isochorismatase hydrolase" /codon_start=1 /transl_table=11 /product="isochorismatase hydrolase" /protein_id="YP_002984116.1" /db_xref="GI:241665757" /db_xref="InterPro:IPR000868" /db_xref="GeneID:8021884" /translation="MTTNNTPKRALIVIDVQNEYFTGGLPIEYPDPQQTVANIGVAMD AAREAGIPVIVVQQTSPASSPLFAIDTDGWQLHPVVASRPHDHYLRKLLPSAYPETDL AQWLEARGIDTLTVVGYMTHNCDASTINHALHNGTAVEFLHDASGAVPYQNQAGFASA EEIHRVFSVVLQSRFAAVMSTQEWVHSVKTGAVPVRDNIYKSNQRARGLLKDEVAQRA A" gene 803952..804947 /locus_tag="Rpic12D_4197" /db_xref="GeneID:8021885" CDS 803952..804947 /locus_tag="Rpic12D_4197" /inference="protein motif:PFAM:PF01965" /note="PFAM: ThiJ/PfpI domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bpt:Bpet2223 AraC family transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, AraC family" /protein_id="YP_002984117.1" /db_xref="GI:241665758" /db_xref="InterPro:IPR000005" /db_xref="InterPro:IPR002818" /db_xref="GeneID:8021885" /translation="MQPQQLQQPQHPQEIAVLAFNDISPFHLSVPCLVFEDRVWAGLP SYNLRICAGEPARKGGLRTTAGFAVQTDFTLEDAARADVLVVPSWRDTEERPPAAMVN AVRDAYERGATVVGLCLGAFVLAEAGVLDGHEATTHWSAADAFSQRYPRVKLVPDVLY LDAADGRLVTSAGTAAGLDCCLHLVRRWHGAEVANRMARRLVVAPHRQGGQAQYIEQP LHDAPGGDRLSDLLNWAVANLAQPHSLDSLAERAAMSRRNFTRRFRELTGTTVSQWLL GQRLAYAQRMLETTRQPVEAIAQLAGFGSAVSLRQHFSRTYHTSPSAYRALFAQA" gene complement(804989..805171) /locus_tag="Rpic12D_4198" /db_xref="GeneID:8021886" CDS complement(804989..805171) /locus_tag="Rpic12D_4198" /inference="protein motif:PFAM:PF05433" /note="PFAM: 17 kDa surface antigen; KEGG: rso:RS02072 putative lipoprotein" /codon_start=1 /transl_table=11 /product="17 kDa surface antigen" /protein_id="YP_002984118.1" /db_xref="GI:241665759" /db_xref="InterPro:IPR008816" /db_xref="GeneID:8021886" /translation="MNAWKTALICALAALAPTLAACTAGGAVAGGVAGHEMTHSTAGT IGGAAAGAVIGHELSK" sig_peptide complement(804989..805078) /locus_tag="Rpic12D_4198" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.798 at residue 30" gene complement(805244..805804) /locus_tag="Rpic12D_4199" /db_xref="GeneID:8021887" CDS complement(805244..805804) /locus_tag="Rpic12D_4199" /inference="protein motif:PFAM:PF02325" /note="PFAM: protein of unknown function YGGT; KEGG: rso:RS02073 hypothetical protein" /codon_start=1 /transl_table=11 /product="protein of unknown function YGGT" /protein_id="YP_002984119.1" /db_xref="GI:241665760" /db_xref="InterPro:IPR003425" /db_xref="GeneID:8021887" /translation="MFGDITRFLLDTIFSLFGAALLLRAWTQAVRLSPRNPLSQAIFQ LTGWLVHPLRRVIPATGYIDWSSLVAAYATALVYLFLLVASVGVSPMALVPMGFVAAL FTVLKWAFNVLVWVTIASAVLSWMGPASPMGAVLNTLVDPLLRPIRRVVPPLGGRLDL SPLILLVIAQVIVIALSHLSLSPLFM" gene 805982..806545 /locus_tag="Rpic12D_4200" /db_xref="GeneID:8021888" CDS 805982..806545 /locus_tag="Rpic12D_4200" /inference="protein motif:PFAM:PF01161" /note="PFAM: PEBP family protein; KEGG: spe:Spro_2903 PEBP family protein" /codon_start=1 /transl_table=11 /product="PEBP family protein" /protein_id="YP_002984120.1" /db_xref="GI:241665761" /db_xref="InterPro:IPR005247" /db_xref="InterPro:IPR008914" /db_xref="GeneID:8021888" /translation="MKPILFRALLSLACLSAVPHVHAQADTTFTVESPAFADNGVMDR KYAGKNPANANCTGDNVSPPLHWSNVPAGTNSLVLIVSDPQGAGGLGVNHWMAYGMPA TQTSLPEGAGTGPALRMGQNSIGKPAYLGPCPPKGTGMHHYVFLLIATDLAPDALPNG LTRAELDAAIKGHSKGAAAWIGRFGNF" sig_peptide 805982..806053 /locus_tag="Rpic12D_4200" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.933 at residue 24" gene complement(806595..807581) /locus_tag="Rpic12D_4201" /db_xref="GeneID:8021889" CDS complement(806595..807581) /locus_tag="Rpic12D_4201" /inference="protein motif:TFAM:TIGR01728" /note="KEGG: rso:RSp1383 putative alkanesulfonates binding protein precursor; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: NMT1/THI5 like domain protein; SMART: extracellular solute-binding protein family 3" /codon_start=1 /transl_table=11 /product="aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein" /protein_id="YP_002984121.1" /db_xref="GI:241665762" /db_xref="InterPro:IPR001638" /db_xref="InterPro:IPR010067" /db_xref="InterPro:IPR015168" /db_xref="GeneID:8021889" /translation="MQSHPPHTAPSGRRRWLAALLGAGMALCAGLTQAAEPTTVRIGF QKAGLLAVLKAQGALDKPLAELGYKVEWKEFPAGPQLLEALNTGSIEFGYTGAPPAVF AQAAGARLVYVGAEPGGKTNEALFVLDSSPAHSVADLKGKRIALQKGSSSNYLLVQLL RRANLTVQDIQPIYLPPAEARAAFESGAVDAWVVWDPYYALAQKALKTRTLGDFSELP VFNFYEATPEFVNTHPRAVNAILAQLRTAGLWVNQHPQETAALLAPKLGIEQPVVETW LRRVPYGVTPVTPQIVASQQQIADLFLQQKLIPKPVNVQSAVWQANFPVAGL" sig_peptide complement(806595..806699) /locus_tag="Rpic12D_4201" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.996 at residue 35" gene complement(807679..807972) /locus_tag="Rpic12D_4202" /db_xref="GeneID:8021890" CDS complement(807679..807972) /locus_tag="Rpic12D_4202" /inference="protein motif:PFAM:PF06155" /note="PFAM: protein of unknown function DUF971; KEGG: pfo:Pfl01_3157 hypothetical protein" /codon_start=1 /transl_table=11 /product="protein of unknown function DUF971" /protein_id="YP_002984122.1" /db_xref="GI:241665763" /db_xref="InterPro:IPR010376" /db_xref="GeneID:8021890" /translation="MHPPERIDNDVAQGRLRLHWADAVVVLDHAALREACRCAECQFK RHHGTPINVPAAVRVTSIAPAGYGVQLVFSDGHARGIYPWAYLAELVAIAAPG" gene complement(807959..808918) /locus_tag="Rpic12D_4203" /db_xref="GeneID:8021891" CDS complement(807959..808918) /locus_tag="Rpic12D_4203" /inference="protein motif:PFAM:PF03130" /note="PFAM: PBS lyase HEAT domain protein repeat-containing protein; HEAT domain containing protein; SMART: PBS lyase HEAT domain protein repeat-containing protein; KEGG: ppw:PputW619_5008 heat repeat-containing PBS lyase" /codon_start=1 /transl_table=11 /product="PBS lyase HEAT domain protein repeat-containing protein" /protein_id="YP_002984123.1" /db_xref="GI:241665764" /db_xref="InterPro:IPR000357" /db_xref="InterPro:IPR004155" /db_xref="GeneID:8021891" /translation="MTTTPLARLHDADAATRRVALLQIADEEDADSLPNVIALLEQDP APEVRLEAARILATWEQPDTVAALARALEDVDGAVRDAAAIGLADLKSPESASALLAY VDHASAFVRAAALRGLRELRVPESEAPALHALQDADAAVRREAVAVLGWRKHVGALPA LAERARHDADVDVRRAAVGALGLATDAAVLPALLAALHDTAWRVREESASTLGKLRAL APDLHVTQALVDALADAYWQVRLQAARALGRWRAAHAVDALAALLTHPISNLRKEAAL ALGEIGEASALPALRSAQTDGDPEVVKAVRIALAQIERARASA" gene complement(808926..809192) /locus_tag="Rpic12D_4204" /db_xref="GeneID:8021892" CDS complement(808926..809192) /locus_tag="Rpic12D_4204" /inference="protein motif:PFAM:PF00037" /note="PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bch:Bcen2424_1973 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein" /codon_start=1 /transl_table=11 /product="4Fe-4S ferredoxin iron-sulfur binding domain protein" /protein_id="YP_002984124.1" /db_xref="GI:241665765" /db_xref="InterPro:IPR001450" /db_xref="InterPro:IPR017900" /db_xref="GeneID:8021892" /translation="MQQTTVHFTHTPHDITSRSSAPVTIDEAKCIADKGCTVCVDVCP LDLLAIDLTKGKAFMQFDECWYCMPCEQDCPTGAVKVDIPYLLR" gene complement(809195..810919) /locus_tag="Rpic12D_4205" /db_xref="GeneID:8021893" CDS complement(809195..810919) /locus_tag="Rpic12D_4205" /inference="protein motif:PFAM:PF02910" /note="PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; KEGG: reh:H16_B2242 putative oxidoreductase" /codon_start=1 /transl_table=11 /product="fumarate reductase/succinate dehydrogenase flavoprotein domain protein" /protein_id="YP_002984125.1" /db_xref="GI:241665766" /db_xref="InterPro:IPR003953" /db_xref="InterPro:IPR004112" /db_xref="InterPro:IPR004792" /db_xref="InterPro:IPR013027" /db_xref="GeneID:8021893" /translation="MNTLELEYDLVVVGGGTAGPMAAIKAKERNPALRVLLIDKAHVK RSGAISMGMDGLNNAVIPGHATPEQYTREITLANDGIVDQSGVYAYAQHSFATIEQLD RWGVKFEKDETGDYAVKKVHHMGSYVLPMPEGHDIKKVLYRQLKRARVEITNRIVVTR VLTDADGAACGVLGFDCRTADFLVVRAKAVVLSCGAAGRLGLPASGYLMGTYENPTNA GDGYAMAYHAGAELSNLECFQINPLIKDYNGPACAYVTGPLGGYTANARGERFIQCDY WSGQMMWEFYQELQGGKGPVFLKLDHLAEETIQTIETILHTNERPSRGRFHAGRGTDY RTQMVEMHISEIGFCSGHSASGVYVNARAETTVPGLYAAGDMAAVPHNYMLGAFTYGW FAGQNAADYIAGRQGVARVDDAQIERERARIFAPLQRDHGLAPAQVEYKLRRMVNDYL QPPKVTRKMEIGLRRFDEIAEDITHLHARNPHELMRAMEVSFIRDCAEMAARASLFRT ESRWGLYHHRVDYPERDDANWFCHTRLYKDAHGAMASRKQAVEPYVIPVDVLGTDSYA QMRIPKAA" gene complement(810916..811701) /locus_tag="Rpic12D_4206" /db_xref="GeneID:8021894" CDS complement(810916..811701) /locus_tag="Rpic12D_4206" /inference="protein motif:PFAM:PF07702" /note="PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: reh:H16_B2241 transcriptional regulator, GntR-family" /codon_start=1 /transl_table=11 /product="transcriptional regulator, GntR family" /protein_id="YP_002984126.1" /db_xref="GI:241665767" /db_xref="InterPro:IPR000524" /db_xref="InterPro:IPR011663" /db_xref="GeneID:8021894" /translation="MTTSNLHRQPAPPLYERIKGTLREGILSGHYAPASLLPSEAALG EQFNASRITVRQALADLQNEGLIFRRHGKGTFVSQPKAFQNVTALQGFAEAMSAQGHA IRNRVLKLRTLPAPTDVAQALQLAPGTAVTELHRVRLLDQVPVSLEVTWLPEPLGSSV ARADLVTRDVFLVLEQDAGVALGHATLAIDAALADHATATALDTGAGAALLRVERLTH DAQGTPIDFERLYFRGDAFQYRLRLDRQVAAHAQSILPLQGTK" gene 812097..813083 /locus_tag="Rpic12D_4207" /db_xref="GeneID:8021895" CDS 812097..813083 /locus_tag="Rpic12D_4207" /inference="protein motif:PFAM:PF00532" /note="PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: aav:Aave_2255 periplasmic binding protein/LacI transcriptional regulator" /codon_start=1 /transl_table=11 /product="periplasmic binding protein/LacI transcriptional regulator" /protein_id="YP_002984127.1" /db_xref="GI:241665768" /db_xref="InterPro:IPR001761" /db_xref="GeneID:8021895" /translation="MQKTSAACARRTVLTFLATAGVLLATGLATAAHAADKSFTMGFA QVGAESEWRTANSESIKSTAKAQGVNLKFSDAQQKQENQIKAIRSYIAQKVDVIAFSP VVESGWDTVLQEAKAAKIPVILTDRGIDSKDTSLYTTFIGSDFVEEGRKAGRWLLENV KPKGDVNIVELQGTVGSAPAIDRKRGFEEIIKADPHYKIIRSQTGDFTRAKGKEVMEA FLKAEGKKINVLYAHNDDMAIGAIQAIEEAGLKPGKDITIISIDGVKGAFEAMMAGKL NVTVECSPLLGPQLMDTARAVLAGKTVPKRIVTKEGIFPMEVAAKEFPNRKY" sig_peptide 812097..812201 /locus_tag="Rpic12D_4207" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 1.000) with cleavage site probability 0.995 at residue 35" gene 813184..814761 /locus_tag="Rpic12D_4208" /db_xref="GeneID:8021896" CDS 813184..814761 /locus_tag="Rpic12D_4208" /inference="protein motif:PFAM:PF00005" /note="PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bph:Bphy_5517 ABC transporter related" /codon_start=1 /transl_table=11 /product="ABC transporter related" /protein_id="YP_002984128.1" /db_xref="GI:241665769" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR017871" /db_xref="GeneID:8021896" /translation="MSDHVDQPAATDARGALLHMRGICKNFPGVQALAAVDFRLFPGE VHALMGQNGAGKSTLIKVLTGVEAPDAGEIVLGGQPIAPSSPLEAQKLGISTVYQEVN LCPNLTVAENIHIGRFPMRMGSIDWRATNRAAQALLADLNIHIDVTLPLSLYPVAIQQ MVAIARALSTEARILILDEPTSSLDDDEVARLFAAIRTLKARGMAVLFVTHFLEQTYA IADRITVLRNGRLEGEYAARDLPQLQLINKMVGRDIDASRFERTEVPSVDDTAPAFLS ARGMGRRGVVQPLDLDVRPGQVLGLGGLLGSGRTETARLLFGVDRNDAGSINVHGQAR QFSSPRDAIRQGIGFCPEDRKTEGIIAELSIRENIILALQAKRGLFRYLPKKRQREIA DQYIAQLGIKTPDAEKPIGQLSGGNQQKAVLARWLATDPAMLILDEPTRGIDIAAKLD IMDLVTAQCRKGMAILFISSELPEVLRVSHRLAILRDRKKVGELAGADVTEDNLCHVI AGGDVPASQSTTTGGAA" gene 814758..815807 /locus_tag="Rpic12D_4209" /db_xref="GeneID:8021897" CDS 814758..815807 /locus_tag="Rpic12D_4209" /EC_number="3.6.3.17" /inference="protein motif:PRIAM:3.6.3.17" /note="PFAM: inner-membrane translocator; KEGG: aav:Aave_2250 inner-membrane translocator" /codon_start=1 /transl_table=11 /product="Monosaccharide-transporting ATPase" /protein_id="YP_002984129.1" /db_xref="GI:241665770" /db_xref="InterPro:IPR001851" /db_xref="GeneID:8021897" /translation="MNPVNLRALTGHRLFWPGVTLLLLCLLNAWFNPHFFHLDIRNGH LYGSLIDILNRAAPLMLVSLGMTLVIAVGGIDISVGAVVAISGAIAASLVGGTLVVQN GLPVYVTKAPLLLALLAAVGAALVCGLWNGLLVAGAGMQPIIATLILMVAGRGVAQLI TGGQIITVYYEPFFFVGNGYLFGLPFGLYIAAAVLGLLLLLMHRTALGLFVEAVGINP VAARLAGLNTKALLFGIYAFCGAMAGVAGLIICSNVKSADGNNAGLLLELDAILAVTL GGTSLAGGKFSLWGSVIGALIIQTLTYAIYSMGVPPEINLVVKAVVVFAVCLAQSEAF RSMLFQRHSRAGAQS" gene 815804..816877 /locus_tag="Rpic12D_4210" /db_xref="GeneID:8021898" CDS 815804..816877 /locus_tag="Rpic12D_4210" /EC_number="3.6.3.17" /inference="protein motif:PRIAM:3.6.3.17" /note="PFAM: inner-membrane translocator; KEGG: aav:Aave_2249 inner membrane ABC transporter permease protein YjfF" /codon_start=1 /transl_table=11 /product="Monosaccharide-transporting ATPase" /protein_id="YP_002984130.1" /db_xref="GI:241665771" /db_xref="InterPro:IPR001851" /db_xref="GeneID:8021898" /translation="MRINPRRLPFYVTLFLFALLFGFGSVTYTGFFSVQVFLNLLIDN AFLIVVAIGMTFVILSGGIDLSVGAVVALTTMISAAQVEHHGWSIGVVVPLVLAVGCL FGLVMGVLIQVFRIQPFIVTLGGMFLARGLCYLISIDSISITDPIYTALSQYKIQVGG GNYVSPSVVIALVVFAAAAWLAHCSRFGRTVYALGGNERSALLMGLPVVRTRILVYVL SGFCSALGGVLVTFYMLSGYGLHAQGMELDAIAATVVGGTLLTGGVGLISGSVVGVLL LGVIQSLITFDGTLSSWWARIAIGVLLCLFCLMQRFLGRAQRGASLPPSTPHRPARPS NETAKDAPASAILMQSHAVPPFN" sig_peptide 815804..815887 /locus_tag="Rpic12D_4210" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.967) with cleavage site probability 0.476 at residue 28" gene 816942..817286 /locus_tag="Rpic12D_4211" /pseudo /db_xref="GeneID:8021899" gene complement(817335..817904) /locus_tag="Rpic12D_4212" /db_xref="GeneID:8021900" CDS complement(817335..817904) /locus_tag="Rpic12D_4212" /inference="similar to AA sequence:KEGG:Rmet_5010" /note="KEGG: rme:Rmet_5010 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002984131.1" /db_xref="GI:241665772" /db_xref="GeneID:8021900" /translation="MHNPKLSFINQEAWEAWLETHGETVTGVWLRIARRSAEQSTVSY AEAVESALCYGWIDGQKQAENEHYWLQRFTPRTAKSIWSKINTAKAEALITAGRMRPA GLRAIELAKQDGRWEAAYSPAGTSTVPDDLQQALDANPKAKQFFATLNGQNRYAILFR IQNVKKAETRAKKITQFIDMLNKGEKLHP" gene complement(817942..818367) /locus_tag="Rpic12D_4213" /db_xref="GeneID:8021901" CDS complement(817942..818367) /locus_tag="Rpic12D_4213" /inference="similar to AA sequence:KEGG:sync_0841" /note="KEGG: syg:sync_0841 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002984132.1" /db_xref="GI:241665773" /db_xref="InterPro:IPR002345" /db_xref="GeneID:8021901" /translation="MTERDTKLHGSWRLLSFETELQETKERTQPWGADPNGSLIFGAD GRMMVLLTAKVREQGNTDEKLAALFRTIVAYTGRYRVEDDRFITKVDASWNEAWTGTE QERFYTLDGDKLEVRTAWMPNPLVSENAMGRGVLGFRRE" gene complement(818390..819052) /locus_tag="Rpic12D_4214" /db_xref="GeneID:8021902" CDS complement(818390..819052) /locus_tag="Rpic12D_4214" /inference="protein motif:PFAM:PF01872" /note="PFAM: bifunctional deaminase-reductase domain protein; KEGG: rme:Rmet_4484 bifunctional deaminase-reductase-like protein" /codon_start=1 /transl_table=11 /product="bifunctional deaminase-reductase domain protein" /protein_id="YP_002984133.1" /db_xref="GI:241665774" /db_xref="InterPro:IPR002734" /db_xref="GeneID:8021902" /translation="MTRVRVAGFTLSLDGYGAGPDQDINNPLGIGGMELHQWLVATRT FQRTLFGKDGGTTGVDDDFAARSFRNVGAWILGRNMFGPIRGDWPDDNWKGWWGDNPP YHVPVFVLTHHARAPIEMAGGTTFHFITGGFREALDRAREAAGGKDVRIGGGPSTIRQ YLREGLIDELHIAISPVLLGRGEPLFEGIDLRALGYACVESVASEKATHVVLRRPLPT NT" gene 819228..820151 /gene="rdgC" /locus_tag="Rpic12D_4215" /db_xref="GeneID:8021903" CDS 819228..820151 /gene="rdgC" /locus_tag="Rpic12D_4215" /inference="protein motif:PFAM:PF04381" /note="PFAM: putative exonuclease RdgC; KEGG: bcm:Bcenmc03_5879 putative exonuclease RdgC" /codon_start=1 /transl_table=11 /product="putative exonuclease RdgC" /protein_id="YP_002984134.1" /db_xref="GI:241665775" /db_xref="InterPro:IPR007476" /db_xref="GeneID:8021903" /translation="MWFKNLQLHRLPAPWAVTPDQLEKWLAPHAFQPGNSVEKQTFGW ASPRDDGALVYSNNGQMLLVFRAEKKLLPASVINQVTKARALELEEQQGFKPGRKQLR ELKEQVTDELLPRAFSIRRDTRVWIDTANGWLVIDAASQAVADDVRGLLVKSIDQLPL TSVHVKHSPVAAMTEWLLSGDAPGGFTVDQDAELRSTGEGGATVRYVGHALEAEDMRR HIEAGKQCMRLAMTWDDRVSFVLTPSLLIKRVTPLDVIKEAEDPTAQNDDERFDSDVA LMTGELARMLSDLVDSLGGDQLDAVQQAKAA" gene complement(820229..820714) /locus_tag="Rpic12D_4216" /db_xref="GeneID:8021904" CDS complement(820229..820714) /locus_tag="Rpic12D_4216" /inference="similar to AA sequence:KEGG:Rmet_4176" /note="KEGG: rme:Rmet_4176 transcriptional regulator, LysR family" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LysR family" /protein_id="YP_002984135.1" /db_xref="GI:241665776" /db_xref="GeneID:8021904" /translation="MGMTSKPYEGIEDGSLDLIAGKRREGGRRGVPLFRGQLEWLARP GTVVDVTQPLPLILVNEPSVTRSIVLDTLAAAGWLWRIVCTSCSHSGSIAAARGGLGI TVRAQNLAGGGLVPPVNGDVLPPLPAIEFITLLARRLSKPAETLLQLIRKSDLRAGRT D" gene 820725..820986 /locus_tag="Rpic12D_4217" /pseudo /db_xref="GeneID:8021905" gene complement(821077..821508) /locus_tag="Rpic12D_4218" /db_xref="GeneID:8021906" CDS complement(821077..821508) /locus_tag="Rpic12D_4218" /inference="similar to AA sequence:KEGG:Reut_B4592" /note="KEGG: reu:Reut_B4592 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002984136.1" /db_xref="GI:241665777" /db_xref="GeneID:8021906" /translation="MSDVKRDPRRPIHAEKVAASRALRLSVPAEARPAPVSRKDWLRQ RKEQLQAARVAAKQRRDQLKAEILSAAQEVAREERVAARLEAERVKAETRSASVHAKE DARAAAKFERSKPARSTSKRKTLGTGKRKLISYADLLRMRG" gene 821878..822978 /locus_tag="Rpic12D_4219" /db_xref="GeneID:8021907" CDS 821878..822978 /locus_tag="Rpic12D_4219" /inference="protein motif:TFAM:TIGR01123" /note="TIGRFAM: branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV; KEGG: sme:SMc02896 branched-chain amino acid aminotransferase" /codon_start=1 /transl_table=11 /product="branched-chain amino acid aminotransferase" /protein_id="YP_002984137.1" /db_xref="GI:241665778" /db_xref="InterPro:IPR001544" /db_xref="InterPro:IPR005786" /db_xref="GeneID:8021907" /translation="MNNVVESAISIEKRPNPVPAEERARLLENPAFGRVFTDHMATIR YTEGKGWHDAKIGAHGPIQCDPSTLVLHYAQEIFEGMKAYRLPDGGGALFRPEANARR FQNSAKRLAMPALPEDLFLQAVRELVKLDRDWIPSGQGSALYLRPFMIATEVVLGVKP SAEYLFCVIACPVGAYFKGDASSGVTIWVSDNYTRAAPGGTGEAKCGGNYAASLVAQA EATREGCDQVVFLDAVERKWIEELGGMNVFFVFDDGSLQTPPLTGTILPGITRDSLIT LARGMGLTVREEPYSIDQWQADAQSGRLREAFACGTAAVVTPIGKVKGHKHNFTIGDG KAGELTTKLKAALVDLQNGRAPDPHGWLDRLF" gene 822986..823798 /locus_tag="Rpic12D_4220" /db_xref="GeneID:8021908" CDS 822986..823798 /locus_tag="Rpic12D_4220" /inference="protein motif:PFAM:PF00561" /note="PFAM: alpha/beta hydrolase fold; KEGG: ppg:PputGB1_3299 alpha/beta hydrolase fold" /codon_start=1 /transl_table=11 /product="alpha/beta hydrolase fold protein" /protein_id="YP_002984138.1" /db_xref="GI:241665779" /db_xref="InterPro:IPR000073" /db_xref="InterPro:IPR003089" /db_xref="GeneID:8021908" /translation="MAESLSAPSVDGTEAWITTPDGRLHARQWGGPVNDAAKPPIVLL HDSLGCVALWRDFPQRLAQSTGHAVIAYDRLGFGRSDAYPGQLDPGFIQQEAYGGFAA LTDQFGVDRFFVFGHSVGGGMAVSIAAAYPGRCAGLITESAQAFVEEQTRQGIRIAQA QFAEPGQMGRLERYHGSKAQWVLDAWVNTWLSPAFAQWCLDDALLAVRSPVLALHGTE DEYGSTAQPERIVTLAGAPATLKLVQRCGHVPHREQEAAVLAAVNAFLSASA" gene 824101..825264 /locus_tag="Rpic12D_4221" /db_xref="GeneID:8021909" CDS 824101..825264 /locus_tag="Rpic12D_4221" /EC_number="1.14.15.3" /inference="protein motif:PRIAM:1.14.15.3" /note="PFAM: fatty acid desaturase; KEGG: bch:Bcen2424_0980 alkane 1-monooxygenase" /codon_start=1 /transl_table=11 /product="Alkane 1-monooxygenase" /protein_id="YP_002984139.1" /db_xref="GI:241665780" /db_xref="InterPro:IPR005804" /db_xref="GeneID:8021909" /translation="MATPGMVASVEWTDGKRYLWMLGALTITLPIVAAVSALATGWHP LWWAGPFIVFTIIPLLDFLIGDDPENPPEDVVPTLEKQRYYRRIVYLATTVLYVSFAV SMWVLRTYDLVWYDYIAFAFSVGVVTGISINTAHELGHKTDGFERWLAKITLAPVAYG HFFVEHNRGHHVRVATPADPASARYGESFWEFLPRTVVGSVKSAWALEKRRLEQQGHS VWSWRNDVLNAWAMTVVLWGVCIAFVGLKAVPFLIIQAIYGASLLEVVNYLEHYGLCR QQLPSGRYERCTPQHSWNSNHVVTNLFLYQLQRHADHHANPTRSFQALRHFEHSPQLP AGYAAMIMVAYVPPLWFRVMNPRVVAHYNGNMSLANIKPSIRDKVLAQYPARA" gene complement(825274..825537) /locus_tag="Rpic12D_4222" /db_xref="GeneID:8021910" CDS complement(825274..825537) /locus_tag="Rpic12D_4222" /inference="protein motif:PFAM:PF07883" /note="PFAM: Cupin 2 conserved barrel domain protein; KEGG: bpy:Bphyt_7093 hypothetical protein" /codon_start=1 /transl_table=11 /product="Cupin 2 conserved barrel domain protein" /protein_id="YP_002984140.1" /db_xref="GI:241665781" /db_xref="InterPro:IPR013096" /db_xref="GeneID:8021910" /translation="MDRDAFVSALRAEGFTEFVLVTREPGELDTHTHPFEAKALILAG EIHIRAEGAERVYRPGDTFHLAANAPHTERYGAQGVQYLVARR" gene 825766..826665 /locus_tag="Rpic12D_4223" /db_xref="GeneID:8021911" CDS 825766..826665 /locus_tag="Rpic12D_4223" /inference="protein motif:PFAM:PF00165" /note="PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bcj:BCAM0168 AraC family regulatory protein" /codon_start=1 /transl_table=11 /product="transcriptional regulator, AraC family" /protein_id="YP_002984141.1" /db_xref="GI:241665782" /db_xref="InterPro:IPR000005" /db_xref="GeneID:8021911" /translation="MNAITPLALLESAPVSLRSSDGLGWDGFAATLLGIRAGAYRVPA MAQHRVNVHVGPPVRMNCVCDGRRYSRIQAHGDADVIPAGVPGMWTDDADCRILRIAI SDTSVRSIAEQIGVRADITPRLQWRDARVRHLAAALGAELLAEDTSDALYAEGLCTAL VVRLLSSSRDGAAGVADRTGTLAPRVATRVIDYIEAHLHARLTLAELAAQAGLSVPHF NVLFRATLGVPAHRYVVQRRVARAKALLLEGRRSASQIALDVGFAHQSHMTEWMQRLL GVTPRDVIRAGKALAAAADPPAA" gene 826761..827651 /locus_tag="Rpic12D_4224" /db_xref="GeneID:8021912" CDS 826761..827651 /locus_tag="Rpic12D_4224" /inference="protein motif:PFAM:PF05368" /note="PFAM: NmrA family protein; KEGG: bcj:BCAM0169 NmrA-like family protein" /codon_start=1 /transl_table=11 /product="NmrA family protein" /protein_id="YP_002984142.1" /db_xref="GI:241665783" /db_xref="InterPro:IPR008030" /db_xref="GeneID:8021912" /translation="MFVIFGASGKVGHATAVALRNAGRPVRAVVRGARQGEALARIGC EIAIADLTDPASVASAIKGATAVQMLCPVPVGDVDPAFTMERMIDVAADALRANPPSA VLALSDYGAELDRGTGLTRLFHLLEERLKPLATHLTLLRSAEHAQNWAAMLPVMLATG RLPSLHYPLDRAFATVATQDVGALAAQLLLDGPSANTPRIVSVEGPRRVSLIDVARAF SAVVGREIVADAVPRTAWSPMLQRAGLSANHVQLLTELYDAVNAGQIDVEKGVSEQRF GKTELHDVFASLLATHMSSS" gene 827777..828562 /locus_tag="Rpic12D_4225" /db_xref="GeneID:8021913" CDS 827777..828562 /locus_tag="Rpic12D_4225" /inference="similar to AA sequence:KEGG:Pnuc_1326" /note="KEGG: pnu:Pnuc_1326 hypothetical protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_002984143.1" /db_xref="GI:241665784" /db_xref="GeneID:8021913" /translation="MVGARIARAIGTAVVFSAFALPAHAVLPDEIQVYTGDINAPGEF GLELHVNTTPSGIGTPSYPGEVTTPHGWRATAEFSYGLTPSLELGLYVPTTLTRENTF YVTGPKVRVKWMPMRPVDGVGNFAGINVELAHVAGRFEASQNAAELRPIYGYQNDRWL WAVNPVLDWNLSGDGRSGVPEAAPSFKIARTVATGVRAGTEYYAGLGPINHIAPLHEQ QHTVFLAFDVDRKPFVFNFGIGRGLTRASDRWTLKWIFEIPLS" sig_peptide 827777..827854 /locus_tag="Rpic12D_4225" /note="Signal predicted by SignalP 3.0 HMM (Signal peptide probability 0.999) with cleavage site probability 0.998 at residue 26" gene 828637..829161 /locus_tag="Rpic12D_4226" /db_xref="GeneID:8021914" CDS 828637..829161 /locus_tag="Rpic12D_4226" /inference="similar to AA sequence:KEGG:RS02076" /note="KEGG: rso:RS02076 putative signal peptide protein" /codon_start=1 /transl_table=11 /product="putative signal peptide protein" /protein_id="YP_002984144.1" /db_xref="GI:241665785" /db_xref="GeneID:8021914" /translation="MMIDLRCVAMVLLLSASGAHAEDDLQNRGHDPFFQISSGVANCP EPAGPRISEAEWKR